Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-10-03 03:41:21 (38584): Detected: vboxwrapper 26206
2024-10-03 03:41:21 (38584): Detected: BOINC client v8.0.2
2024-10-03 03:41:21 (38584): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-10-03 03:41:21 (38584): Successfully copied 'init_data.xml' to the shared directory.
2024-10-03 03:41:22 (38584): Create VM. (boinc_e79f999d03947d86, slot#6)
2024-10-03 03:41:22 (38584): Setting Memory Size for VM. (4800MB)
2024-10-03 03:41:23 (38584): Setting CPU Count for VM. (8)
2024-10-03 03:41:23 (38584): Setting Chipset Options for VM.
2024-10-03 03:41:23 (38584): Setting Graphics Controller Options for VM.
2024-10-03 03:41:23 (38584): Setting Boot Options for VM.
2024-10-03 03:41:24 (38584): Setting Network Configuration for NAT.
2024-10-03 03:41:24 (38584): Enabling VM Network Access.
2024-10-03 03:41:24 (38584): Disabling USB Support for VM.
2024-10-03 03:41:25 (38584): Disabling COM Port Support for VM.
2024-10-03 03:41:25 (38584): Disabling LPT Port Support for VM.
2024-10-03 03:41:25 (38584): Disabling Audio Support for VM.
2024-10-03 03:41:25 (38584): Disabling Clipboard Support for VM.
2024-10-03 03:41:26 (38584): Disabling Drag and Drop Support for VM.
2024-10-03 03:41:26 (38584): Adding storage controller(s) to VM.
2024-10-03 03:41:26 (38584): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-10-03 03:41:27 (38584): Adding VirtualBox Guest Additions to VM.
2024-10-03 03:41:27 (38584): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-10-03 03:41:27 (38584): forwarding host port 64010 to guest port 80
2024-10-03 03:41:27 (38584): Enabling remote desktop for VM.
2024-10-03 03:41:28 (38584): Required extension pack not installed, remote desktop not enabled.
2024-10-03 03:41:28 (38584): Enabling shared directory for VM.
2024-10-03 03:41:28 (38584): Starting VM using VBoxManage interface. (boinc_e79f999d03947d86, slot#6)
2024-10-03 03:41:36 (38584): Successfully started VM. (PID = '43348')
2024-10-03 03:41:36 (38584): Reporting VM Process ID to BOINC.
2024-10-03 03:41:36 (38584): Guest Log: BIOS: VirtualBox 7.0.18
2024-10-03 03:41:36 (38584): Guest Log: CPUID EDX: 0x178bfbff
2024-10-03 03:41:36 (38584): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-10-03 03:41:36 (38584): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-10-03 03:41:36 (38584): VM state change detected. (old = 'poweredoff', new = 'running')
2024-10-03 03:41:36 (38584): Detected: Web Application Enabled (http://localhost:64010)
2024-10-03 03:41:36 (38584): Preference change detected
2024-10-03 03:41:36 (38584): Setting CPU throttle for VM. (100%)
2024-10-03 03:41:36 (38584): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2024-10-03 03:41:38 (38584): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-10-03 03:41:38 (38584): Guest Log: BIOS: Booting from Hard Disk...
2024-10-03 03:41:41 (38584): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-10-03 03:41:41 (38584): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-10-03 03:41:41 (38584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-10-03 03:41:52 (38584): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-10-03 03:41:52 (38584): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-10-03 03:42:05 (38584): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-10-03 03:42:05 (38584): Guest Log: 00:00:00.000370 main     Log opened 2024-10-03T03:42:02.991592000Z
2024-10-03 03:42:05 (38584): Guest Log: 00:00:00.000617 main     OS Product: Linux
2024-10-03 03:42:05 (38584): Guest Log: 00:00:00.000688 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-10-03 03:42:05 (38584): Guest Log: 00:00:00.000756 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-10-03 03:42:05 (38584): Guest Log: 00:00:00.000824 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-10-03 03:42:05 (38584): Guest Log: 00:00:00.000826 main     Process ID: 1387
2024-10-03 03:42:05 (38584): Guest Log: 00:00:00.000827 main     Package type: LINUX_64BITS_GENERIC
2024-10-03 03:42:05 (38584): Guest Log: 00:00:00.003348 main     5.2.32 r132073 started. Verbose level = 0
2024-10-03 03:42:05 (38584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-10-03 03:42:05 (38584): Guest Log: [INFO] Mounting shared directory
2024-10-03 03:42:05 (38584): Guest Log: [INFO] Checking for init_data.xml
2024-10-03 03:42:09 (38584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-10-03 03:42:09 (38584): Guest Log: [INFO] Detected branch: prod
2024-10-03 03:42:10 (38584): Guest Log: This is the prod version of the ATLAS job wrapper
2024-10-03 03:42:10 (38584): Guest Log: Copying input files
2024-10-03 03:42:13 (38584): Guest Log: Copied input files into RunAtlas.
2024-10-03 03:42:13 (38584): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-10-03 03:42:13 (38584): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-10-03 03:42:13 (38584): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-10-03 03:42:13 (38584): Guest Log: Further information can be found at the LHC@home message board.
2024-10-03 03:42:15 (38584): Guest Log: 00:00:10.028611 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 237 941 000ns (GuestNow=1 727 919 734 758 907 000 ns GuestLast=1 727 926 922 996 848 000 ns fSetTimeLastLoop=true )
2024-10-03 03:42:22 (38584): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-10-03 03:42:23 (38584): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-10-03 03:42:23 (38584): Guest Log: 2.6.3.0 1663 0 32208 137911 4 1 3117528 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-10-03 03:42:24 (38584): Guest Log: copied the webapp to /var/www
2024-10-03 03:42:24 (38584): Guest Log: ATHENA_PROC_NUMBER=8
2024-10-03 03:42:24 (38584): Guest Log: ATHENA_CORE_NUMBER=8
2024-10-03 03:42:24 (38584): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-10-03 03:42:24 (38584): Guest Log:  *** Starting ATLAS job. (PandaID=6354788791 taskID=41491211) ***
2024-10-03 05:21:46 (38584): Status Report: Elapsed Time: '6000.000000'
2024-10-03 05:21:46 (38584): Status Report: CPU Time: '32167.406250'
2024-10-03 07:01:56 (38584): Status Report: Elapsed Time: '12000.000000'
2024-10-03 07:01:56 (38584): Status Report: CPU Time: '74490.593750'
2024-10-03 08:42:06 (38584): Status Report: Elapsed Time: '18000.000000'
2024-10-03 08:42:06 (38584): Status Report: CPU Time: '118225.734375'
2024-10-03 10:22:18 (38584): Status Report: Elapsed Time: '24000.000000'
2024-10-03 10:22:18 (38584): Status Report: CPU Time: '164973.468750'
2024-10-03 11:56:25 (38584): Guest Log:  *** Job finished ***
2024-10-03 11:56:25 (38584): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:12,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:13,082 | INFO     | [job] control thread has finished
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:16,746 | INFO     | [data] queue_monitor thread has finished
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:17,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140001590191936)>', '<ExcThread(monitor, started 140001153111808)>']
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:17,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:17,546 | INFO     | [monitor] control thread has ended
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,323 | INFO     | all workflow threads have been joined
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,323 | INFO     | end of generic workflow (traces error code: 0)
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,324 | INFO     | traces error code: 0
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,482 [wrapper] ==== pilot stdout END ====
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,493 [wrapper] ==== wrapper stdout RESUME ====
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,503 [wrapper] pilotpid: 6038
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,512 [wrapper] Pilot exit status: 0
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,720 [wrapper] pandaids: 6354788791
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,804 [wrapper] cleanup supervisor_pilot  4890 6039
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,820 [wrapper] Test setup, not cleaning
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,828 [wrapper] ==== wrapper stdout END ====
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,836 [wrapper] ==== wrapper stderr END ====
2024-10-03 11:56:25 (38584): Guest Log: 2024-10-03 09:56:22,851 [wrapper] apfmon messages muted
2024-10-03 11:56:25 (38584): Guest Log:  *** Error codes and diagnostics ***
2024-10-03 11:56:25 (38584): Guest Log:     "exeErrorCode": 0,
2024-10-03 11:56:25 (38584): Guest Log:     "exeErrorDiag": "",
2024-10-03 11:56:25 (38584): Guest Log:     "pilotErrorCode": 0,
2024-10-03 11:56:25 (38584): Guest Log:     "pilotErrorDiag": "",
2024-10-03 11:56:25 (38584): Guest Log:  *** Listing of results directory ***
2024-10-03 11:56:25 (38584): Guest Log: total 259980
2024-10-03 11:56:25 (38584): Guest Log: -rw-r--r--. 1 atlas atlas    484599 Oct  3 00:20 pilot3.tar.gz
2024-10-03 11:56:25 (38584): Guest Log: -rwx------. 1 atlas atlas     33814 Oct  3 00:27 runpilot2-wrapper.sh
2024-10-03 11:56:25 (38584): Guest Log: -rw-r--r--. 1 atlas atlas      5653 Oct  3 00:30 queuedata.json
2024-10-03 11:56:25 (38584): Guest Log: -rwxr-xr-x. 1 atlas atlas      9143 Oct  3 01:42 init_data.xml
2024-10-03 11:56:25 (38584): Guest Log: -rwxr-xr-x. 1 atlas atlas    498196 Oct  3 01:42 input.tar.gz
2024-10-03 11:56:25 (38584): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Oct  3 01:42 start_atlas.sh
2024-10-03 11:56:25 (38584): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  3 01:42 EVNT.41491209._000030.pool.root.1 -> /data/./ATLAS.root_0
2024-10-03 11:56:25 (38584): Guest Log: -rw-r--r--. 1 atlas atlas      2627 Oct  3 01:42 pandaJob.out
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas       424 Oct  3 01:42 setup.sh.local
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas   1024603 Oct  3 01:43 agis_schedconf.cvmfs.json
2024-10-03 11:56:25 (38584): Guest Log: drwx------. 4 atlas atlas      4096 Oct  3 01:43 pilot3
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas 256007855 Oct  3 09:54 HITS.41491211._000840.pool.root.1
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas      1033 Oct  3 09:55 memory_monitor_summary.json
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas   1615815 Oct  3 09:55 agis_ddmendpoints.agis.ALL.json
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas    510693 Oct  3 09:55 log.41491211._000840.job.log.tgz.1
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas        95 Oct  3 09:56 pilot_heartbeat.json
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas      7743 Oct  3 09:56 heartbeat.json
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas      4271 Oct  3 09:56 pilotlog.txt
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas   2691293 Oct  3 09:56 log.41491211._000840.job.log.1
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas       357 Oct  3 09:56 output.list
2024-10-03 11:56:25 (38584): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  3 09:56 runtime_log
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas   3225600 Oct  3 09:56 result.tar.gz
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas       649 Oct  3 09:56 SmHODm7rOG6n7OlckoGmwREmGgkVDo1bjSoqOlfODmnusKDmMSofHo.diag
2024-10-03 11:56:25 (38584): Guest Log: -rw-r--r--. 1 atlas atlas     10928 Oct  3 09:56 runtime_log.err
2024-10-03 11:56:25 (38584): Guest Log: Looking for outputfile HITS.41491211._000840.pool.root.1
2024-10-03 11:56:25 (38584): Guest Log: HITS file was successfully produced
2024-10-03 11:56:25 (38584): Guest Log: -rw-------. 1 atlas atlas 256007855 Oct  3 09:54 /home/atlas/RunAtlas/HITS.41491211._000840.pool.root.1
2024-10-03 11:56:27 (38584): Guest Log: Successfully finished the ATLAS job!
2024-10-03 11:56:27 (38584): Guest Log: Copying the results back to the shared directory!
2024-10-03 11:56:27 (38584): Guest Log:  *** Contents of shared directory: ***
2024-10-03 11:56:27 (38584): Guest Log: total 547212
2024-10-03 11:56:27 (38584): Guest Log: -rwxrwxrwx. 1 root root 300575416 Oct  3 01:41 ATLAS.root_0
2024-10-03 11:56:27 (38584): Guest Log: -rwxrwxrwx. 1 root root 256007855 Oct  3 09:56 HITS.pool.root.1
2024-10-03 11:56:27 (38584): Guest Log: -rwxrwxrwx. 1 root root      9143 Oct  3 01:41 init_data.xml
2024-10-03 11:56:27 (38584): Guest Log: -rwxrwxrwx. 1 root root    498196 Oct  3 01:40 input.tar.gz
2024-10-03 11:56:27 (38584): Guest Log: -rwxrwxrwx. 1 root root   3225600 Oct  3 09:56 result.tar.gz
2024-10-03 11:56:27 (38584): Guest Log: -rwxrwxrwx. 1 root root     17537 Oct  3 01:40 start_atlas.sh
2024-10-03 11:56:27 (38584): Guest Log:  *** Success! Shutting down the machine. ***
2024-10-03 11:56:27 (38584): VM Completion File Detected.
2024-10-03 11:56:27 (38584): Powering off VM.
2024-10-03 11:56:28 (38584): Successfully stopped VM.
2024-10-03 11:56:28 (38584): Deregistering VM. (boinc_e79f999d03947d86, slot#6)
2024-10-03 11:56:28 (38584): Removing network bandwidth throttle group from VM.
2024-10-03 11:56:28 (38584): Removing VM from VirtualBox.
11:56:33 (38584): called boinc_finish(0)

</stderr_txt>
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