Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:57:41 (14956): wrapper (7.7.26015): starting
20:57:41 (14956): wrapper: running run_atlas (--nthreads 8)
[2024-10-04 20:57:41] Arguments: --nthreads 8
[2024-10-04 20:57:41] Threads: 8
[2024-10-04 20:57:41] Checking for CVMFS
[2024-10-04 20:57:42] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-04 20:57:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-04 20:57:42] Running cvmfs_config stat atlas.cern.ch
[2024-10-04 20:57:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-04 20:57:43] 2.11.2.0 22494 56092 83880 137979 2 155 19889754 25165824 4211 130560 0 39936308 99.945 20629503 9197 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-04 20:57:43] CVMFS is ok
[2024-10-04 20:57:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-04 20:57:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-04 20:57:43] Further information can be found at the LHC@home message board.
[2024-10-04 20:57:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-04 20:57:43] Checking for apptainer binary...
[2024-10-04 20:57:43] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-04 20:57:43] Running /usr/bin/apptainer --version
[2024-10-04 20:57:43] apptainer version 1.3.2-1.el7
[2024-10-04 20:57:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-04 20:57:45] cg-vwn446.simple-grid.lan
[2024-10-04 20:57:45] apptainer works
[2024-10-04 20:57:45] Set ATHENA_PROC_NUMBER=8
[2024-10-04 20:57:45] Set ATHENA_CORE_NUMBER=8
[2024-10-04 20:57:45] Starting ATLAS job with PandaID=6354774024
[2024-10-04 20:57:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 03:38:19]  *** The last 200 lines of the pilot log: ***
[2024-10-05 03:38:20] 2024-10-05 01:35:28,425 | INFO     | intersect: -18017701150.318592
[2024-10-05 03:38:20] 2024-10-05 01:35:28,425 | INFO     | chi2: 4.967761624530159
[2024-10-05 03:38:20] 2024-10-05 01:35:28,426 | INFO     | model: linear, x: [1728068427.0, 1728068488.0, 1728068549.0, 1728068610.0, 1728068671.0, 1728068732.0, 1728068793.0, 1728068854.0, 1728068915.0, 1728068976.0, 1728
[2024-10-05 03:38:20] 2024-10-05 01:35:28,426 | INFO     | sum of square deviations: 17284846875.5
[2024-10-05 03:38:20] 2024-10-05 01:35:28,437 | INFO     | sum of deviations: 211942991622.5
[2024-10-05 03:38:20] 2024-10-05 01:35:28,437 | INFO     | mean x: 1728080047.5
[2024-10-05 03:38:20] 2024-10-05 01:35:28,437 | INFO     | mean y: 2512881.5
[2024-10-05 03:38:20] 2024-10-05 01:35:28,437 | INFO     | -- intersect: -21186824673.433197
[2024-10-05 03:38:20] 2024-10-05 01:35:28,437 | INFO     | intersect: -21186824673.433197
[2024-10-05 03:38:20] 2024-10-05 01:35:28,438 | INFO     | chi2: 4.149238025267078
[2024-10-05 03:38:20] 2024-10-05 01:35:28,438 | INFO     | current chi2=4.149238025267078 (change=16.476708447952053 %)
[2024-10-05 03:38:20] 2024-10-05 01:35:28,438 | INFO     | right removable region: 381
[2024-10-05 03:38:20] 2024-10-05 01:35:28,439 | INFO     | model: linear, x: [1728068732.0, 1728068793.0, 1728068854.0, 1728068915.0, 1728068976.0, 1728069037.0, 1728069098.0, 1728069159.0, 1728069220.0, 1728069281.0, 1728
[2024-10-05 03:38:20] 2024-10-05 01:35:28,439 | INFO     | sum of square deviations: 17284846875.5
[2024-10-05 03:38:20] 2024-10-05 01:35:28,443 | INFO     | sum of deviations: 86764388952.0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,444 | INFO     | mean x: 1728080352.5
[2024-10-05 03:38:20] 2024-10-05 01:35:28,444 | INFO     | mean y: 2529788.429319372
[2024-10-05 03:38:20] 2024-10-05 01:35:28,444 | INFO     | -- intersect: -8671879474.469173
[2024-10-05 03:38:20] 2024-10-05 01:35:28,444 | INFO     | intersect: -8671879474.469173
[2024-10-05 03:38:20] 2024-10-05 01:35:28,445 | INFO     | chi2: 2.4192920672623046
[2024-10-05 03:38:20] 2024-10-05 01:35:28,445 | INFO     | current chi2=2.4192920672623046 (change=51.300157895738074 %)
[2024-10-05 03:38:20] 2024-10-05 01:35:28,445 | INFO     | model: linear, x: [1728069037.0, 1728069098.0, 1728069159.0, 1728069220.0, 1728069281.0, 1728069342.0, 1728069403.0, 1728069464.0, 1728069525.0, 1728069586.0, 1728
[2024-10-05 03:38:20] 2024-10-05 01:35:28,446 | INFO     | sum of square deviations: 16614964548.0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,458 | INFO     | sum of deviations: 13279391584.000008
[2024-10-05 03:38:20] 2024-10-05 01:35:28,458 | INFO     | mean x: 1728080505.0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,458 | INFO     | mean y: 2546517.3633952253
[2024-10-05 03:38:20] 2024-10-05 01:35:28,459 | INFO     | -- intersect: -1378609466.9467726
[2024-10-05 03:38:20] 2024-10-05 01:35:28,459 | INFO     | intersect: -1378609466.9467726
[2024-10-05 03:38:20] 2024-10-05 01:35:28,459 | INFO     | chi2: 1.1768869489718616
[2024-10-05 03:38:20] 2024-10-05 01:35:28,459 | INFO     | current chi2=1.1768869489718616 (change=51.354077298172655 %)
[2024-10-05 03:38:20] 2024-10-05 01:35:28,460 | INFO     | model: linear, x: [1728069342.0, 1728069403.0, 1728069464.0, 1728069525.0, 1728069586.0, 1728069647.0, 1728069708.0, 1728069769.0, 1728069830.0, 1728069891.0, 1728
[2024-10-05 03:38:20] 2024-10-05 01:35:28,460 | INFO     | sum of square deviations: 15962617433.0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,464 | INFO     | sum of deviations: -15029082918.500002
[2024-10-05 03:38:20] 2024-10-05 01:35:28,465 | INFO     | mean x: 1728080657.5
[2024-10-05 03:38:20] 2024-10-05 01:35:28,465 | INFO     | mean y: 2553096.8467741935
[2024-10-05 03:38:20] 2024-10-05 01:35:28,465 | INFO     | -- intersect: 1629571197.1322513
[2024-10-05 03:38:20] 2024-10-05 01:35:28,465 | INFO     | intersect: 1629571197.1322513
[2024-10-05 03:38:20] 2024-10-05 01:35:28,465 | INFO     | chi2: 0.8603279872493145
[2024-10-05 03:38:20] 2024-10-05 01:35:28,465 | INFO     | current chi2=0.8603279872493145 (change=26.897992368688918 %)
[2024-10-05 03:38:20] 2024-10-05 01:35:28,466 | INFO     | model: linear, x: [1728069647.0, 1728069708.0, 1728069769.0, 1728069830.0, 1728069891.0, 1728069952.0, 1728070013.0, 1728070074.0, 1728070135.0, 1728070196.0, 1728
[2024-10-05 03:38:20] 2024-10-05 01:35:28,466 | INFO     | sum of square deviations: 15327572968.0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,470 | INFO     | sum of deviations: -20319937530.0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,471 | INFO     | mean x: 1728080810.0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,471 | INFO     | mean y: 2554364.482288828
[2024-10-05 03:38:20] 2024-10-05 01:35:28,471 | INFO     | -- intersect: 2293490716.852084
[2024-10-05 03:38:20] 2024-10-05 01:35:28,471 | INFO     | intersect: 2293490716.852084
[2024-10-05 03:38:20] 2024-10-05 01:35:28,471 | INFO     | chi2: 0.8528341746478245
[2024-10-05 03:38:20] 2024-10-05 01:35:28,472 | INFO     | current chi2=0.8528341746478245 (change=0.8710413601037862 %)
[2024-10-05 03:38:20] 2024-10-05 01:35:28,472 | INFO     | left removable region: 40
[2024-10-05 03:38:20] 2024-10-05 01:35:28,472 | INFO     | model: linear, x: [1728070867.0, 1728070928.0, 1728070989.0, 1728071050.0, 1728071111.0, 1728071172.0, 1728071233.0, 1728071294.0, 1728071355.0, 1728071416.0, 1728
[2024-10-05 03:38:20] 2024-10-05 01:35:28,472 | INFO     | sum of square deviations: 12295263090.0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,490 | INFO     | sum of deviations: 1711107767.0000002
[2024-10-05 03:38:20] 2024-10-05 01:35:28,491 | INFO     | mean x: 1728081237.0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,491 | INFO     | mean y: 2561644.9853372434
[2024-10-05 03:38:20] 2024-10-05 01:35:28,491 | INFO     | -- intersect: -237932047.99164388
[2024-10-05 03:38:20] 2024-10-05 01:35:28,491 | INFO     | intersect: -237932047.99164388
[2024-10-05 03:38:20] 2024-10-05 01:35:28,491 | INFO     | chi2: 0.0057037441787255614
[2024-10-05 03:38:20] 2024-10-05 01:35:28,492 | INFO     | -- intersect: -237932047.99164388
[2024-10-05 03:38:20] 2024-10-05 01:35:28,492 | INFO     | current memory leak: 0.14 B/s (using 341 data points, chi2=0.01)
[2024-10-05 03:38:20] 2024-10-05 01:35:28,493 | INFO     | ..............................
[2024-10-05 03:38:20] 2024-10-05 01:35:28,493 | INFO     | . Timing measurements:
[2024-10-05 03:38:20] 2024-10-05 01:35:28,493 | INFO     | . get job = 0 s
[2024-10-05 03:38:20] 2024-10-05 01:35:28,493 | INFO     | . initial setup = 3 s
[2024-10-05 03:38:20] 2024-10-05 01:35:28,493 | INFO     | . payload setup = 26 s
[2024-10-05 03:38:20] 2024-10-05 01:35:28,493 | INFO     | . stage-in = 0 s
[2024-10-05 03:38:20] 2024-10-05 01:35:28,493 | INFO     | . payload execution = 23646 s
[2024-10-05 03:38:20] 2024-10-05 01:35:28,493 | INFO     | . stage-out = 4 s
[2024-10-05 03:38:20] 2024-10-05 01:35:28,494 | INFO     | . log creation = 1 s
[2024-10-05 03:38:20] 2024-10-05 01:35:28,494 | INFO     | ..............................
[2024-10-05 03:38:20] 2024-10-05 01:35:28,655 | INFO     | 
[2024-10-05 03:38:20] 2024-10-05 01:35:28,656 | INFO     | job summary report
[2024-10-05 03:38:20] 2024-10-05 01:35:28,656 | INFO     | --------------------------------------------------
[2024-10-05 03:38:20] 2024-10-05 01:35:28,656 | INFO     | PanDA job id: 6354774024
[2024-10-05 03:38:20] 2024-10-05 01:35:28,656 | INFO     | task id: 41481181
[2024-10-05 03:38:20] 2024-10-05 01:35:28,656 | INFO     | errors: (none)
[2024-10-05 03:38:20] 2024-10-05 01:35:28,656 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 03:38:20] 2024-10-05 01:35:28,656 | INFO     | pilot state: finished 
[2024-10-05 03:38:20] 2024-10-05 01:35:28,657 | INFO     | transexitcode: 0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,657 | INFO     | exeerrorcode: 0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,657 | INFO     | exeerrordiag: 
[2024-10-05 03:38:20] 2024-10-05 01:35:28,657 | INFO     | exitcode: 0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,657 | INFO     | exitmsg: OK
[2024-10-05 03:38:20] 2024-10-05 01:35:28,657 | INFO     | cpuconsumptiontime: 88915 s
[2024-10-05 03:38:20] 2024-10-05 01:35:28,657 | INFO     | nevents: 400
[2024-10-05 03:38:20] 2024-10-05 01:35:28,657 | INFO     | neventsw: 0
[2024-10-05 03:38:20] 2024-10-05 01:35:28,657 | INFO     | pid: 3134
[2024-10-05 03:38:20] 2024-10-05 01:35:28,657 | INFO     | pgrp: 3134
[2024-10-05 03:38:20] 2024-10-05 01:35:28,658 | INFO     | corecount: 8
[2024-10-05 03:38:20] 2024-10-05 01:35:28,658 | INFO     | event service: False
[2024-10-05 03:38:20] 2024-10-05 01:35:28,658 | INFO     | sizes: {0: 2433968, 1: 2435504, 2: 2435504, 12: 2435532, 23: 2435560, 24: 2435794, 34: 2435950, 23677: 2470409, 23678: 2470408, 23682: 2479544, 23769: 2479658}
[2024-10-05 03:38:20] 2024-10-05 01:35:28,658 | INFO     | --------------------------------------------------
[2024-10-05 03:38:20] 2024-10-05 01:35:28,658 | INFO     | 
[2024-10-05 03:38:20] 2024-10-05 01:35:28,658 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-05 03:38:20] 2024-10-05 01:35:29,339 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,339 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,339 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,339 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,339 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,339 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,340 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,340 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,340 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,340 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,340 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,341 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 03:38:20] 2024-10-05 01:35:29,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,341 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 03:38:20] 2024-10-05 01:35:29,341 | INFO     | job 6354774024 has completed (purged errors)
[2024-10-05 03:38:20] 2024-10-05 01:35:29,341 | INFO     | overall cleanup function is called
[2024-10-05 03:38:20] 2024-10-05 01:35:30,350 | INFO     | --- collectZombieJob: --- 10, [3134]
[2024-10-05 03:38:20] 2024-10-05 01:35:30,350 | INFO     | zombie collector waiting for pid 3134
[2024-10-05 03:38:20] 2024-10-05 01:35:30,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 03:38:20] 2024-10-05 01:35:30,351 | INFO     | collected zombie processes
[2024-10-05 03:38:20] 2024-10-05 01:35:30,351 | INFO     | will  attempt to kill all subprocesses of pid=3134
[2024-10-05 03:38:20] 2024-10-05 01:35:31,156 | INFO     | process IDs to be killed: [3134] (in reverse order)
[2024-10-05 03:38:20] 2024-10-05 01:35:31,995 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 03:38:20] 2024-10-05 01:35:31,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 03:38:20] 2024-10-05 01:35:31,998 | INFO     | did not find any defunct processes belonging to 3134
[2024-10-05 03:38:20] 2024-10-05 01:35:32,001 | INFO     | did not find any defunct processes belonging to 3134
[2024-10-05 03:38:20] 2024-10-05 01:35:32,002 | INFO     | ready for new job
[2024-10-05 03:38:20] 2024-10-05 01:35:32,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 03:38:20] 2024-10-05 01:35:32,004 | INFO     | *************************************
[2024-10-05 03:38:20] 2024-10-05 01:35:32,005 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 03:38:20] 2024-10-05 01:35:32,005 | INFO     | *************************************
[2024-10-05 03:38:20] 2024-10-05 01:35:32,005 | INFO     | 
[2024-10-05 03:38:20] 2024-10-05 01:35:32,005 | INFO     | pilot is running in a VM
[2024-10-05 03:38:20] 2024-10-05 01:35:32,006 | INFO     | architecture information:
[2024-10-05 03:38:20] 2024-10-05 01:35:32,017 | INFO     | executing command: cat /etc/os-release
[2024-10-05 03:38:20] 2024-10-05 01:35:32,203 | INFO     | cat /etc/os-release:
[2024-10-05 03:38:20] NAME="CentOS Linux"
[2024-10-05 03:38:20] VERSION="7 (Core)"
[2024-10-05 03:38:20] ID="centos"
[2024-10-05 03:38:20] ID_LIKE="rhel fedora"
[2024-10-05 03:38:20] VERSION_ID="7"
[2024-10-05 03:38:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 03:38:20] ANSI_COLOR="0;31"
[2024-10-05 03:38:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 03:38:20] HOME_URL="https://www.centos.org/"
[2024-10-05 03:38:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 03:38:20] 
[2024-10-05 03:38:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 03:38:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 03:38:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 03:38:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 03:38:20] 
[2024-10-05 03:38:20] 2024-10-05 01:35:32,204 | INFO     | *************************************
[2024-10-05 03:38:20] 2024-10-05 01:35:32,706 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-05 03:38:20] 2024-10-05 01:35:32,959 | INFO     | sufficient remaining disk space (486178553856 B)
[2024-10-05 03:38:20] 2024-10-05 01:35:32,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 03:38:20] 2024-10-05 01:35:32,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 03:38:20] 2024-10-05 01:35:32,962 | INFO     | all data control threads have been joined
[2024-10-05 03:38:20] 2024-10-05 01:35:33,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 03:38:20] 2024-10-05 01:35:33,261 | INFO     | all job control threads have been joined
[2024-10-05 03:38:20] 2024-10-05 01:35:33,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 03:38:20] 2024-10-05 01:35:33,403 | INFO     | aborting loop
[2024-10-05 03:38:20] 2024-10-05 01:35:33,406 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 03:38:20] 2024-10-05 01:35:33,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 03:38:20] 2024-10-05 01:35:33,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 03:38:20] 2024-10-05 01:35:33,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 03:38:20] 2024-10-05 01:35:33,876 | INFO     | all payload control threads have been joined
[2024-10-05 03:38:20] 2024-10-05 01:35:33,965 | INFO     | [job] retrieve thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:33,968 | INFO     | [data] control thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:34,200 | INFO     | [job] validate thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:34,267 | INFO     | [job] control thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:34,313 | INFO     | [data] copytool_in thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:34,335 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:34,409 | INFO     | [job] job monitor thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:34,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 03:38:20] 2024-10-05 01:35:34,440 | INFO     | [payload] validate_post thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:34,683 | INFO     | [job] queue monitor thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:34,882 | INFO     | [payload] control thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:34,895 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:35,053 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:35,107 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:35,487 | INFO     | [payload] failed_post thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:36,431 | INFO     | [data] copytool_out thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:37,058 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 03:38:20] 2024-10-05 01:35:37,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293114926912)>', '<ExcThread(monitor, started 140292531406592)>']
[2024-10-05 03:38:20] 2024-10-05 01:35:38,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 03:38:20] 2024-10-05 01:35:38,436 | INFO     | [monitor] control thread has ended
[2024-10-05 03:38:20] 2024-10-05 01:35:42,695 | INFO     | all workflow threads have been joined
[2024-10-05 03:38:20] 2024-10-05 01:35:42,695 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 03:38:20] 2024-10-05 01:35:42,696 | INFO     | traces error code: 0
[2024-10-05 03:38:20] 2024-10-05 01:35:42,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 03:38:20] 2024-10-05 01:35:43,022 [wrapper] ==== pilot stdout END ====
[2024-10-05 03:38:20] 2024-10-05 01:35:43,109 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 03:38:20] 2024-10-05 01:35:43,162 [wrapper] pilotpid: 26590
[2024-10-05 03:38:20] 2024-10-05 01:35:43,213 [wrapper] Pilot exit status: 0
[2024-10-05 03:38:20] 2024-10-05 01:35:43,495 [wrapper] pandaids: 6354774024
[2024-10-05 03:38:20] 2024-10-05 01:35:43,816 [wrapper] cleanup supervisor_pilot  5927 26593
[2024-10-05 03:38:20] 2024-10-05 01:35:43,869 [wrapper] Test setup, not cleaning
[2024-10-05 03:38:20] 2024-10-05 01:35:43,981 [wrapper] ==== wrapper stdout END ====
[2024-10-05 03:38:20] 2024-10-05 01:35:44,033 [wrapper] ==== wrapper stderr END ====
[2024-10-05 03:38:20] 2024-10-05 01:35:44,206 [wrapper] apfmon messages muted
[2024-10-05 03:38:20]  *** Error codes and diagnostics ***
[2024-10-05 03:38:20]     "exeErrorCode": 0,
[2024-10-05 03:38:20]     "exeErrorDiag": "",
[2024-10-05 03:38:20]     "pilotErrorCode": 0,
[2024-10-05 03:38:20]     "pilotErrorDiag": "",
[2024-10-05 03:38:20]  *** Listing of results directory ***
[2024-10-05 03:38:20] total 891560
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc    484599 Oct  3 01:51 pilot3.tar.gz
[2024-10-05 03:38:20] -rwx------. 1 boinc boinc     33814 Oct  3 02:07 runpilot2-wrapper.sh
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc      5653 Oct  3 02:07 queuedata.json
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc       100 Oct  4 20:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 03:38:20] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 20:57 run_atlas
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc       105 Oct  4 20:57 job.xml
[2024-10-05 03:38:20] -rw-r--r--. 2 boinc boinc 636574616 Oct  4 20:57 EVNT.41466530._000090.pool.root.1
[2024-10-05 03:38:20] -rw-r--r--. 2 boinc boinc     17537 Oct  4 20:57 start_atlas.sh
[2024-10-05 03:38:20] drwxrwx--x. 2 boinc boinc        68 Oct  4 20:57 shared
[2024-10-05 03:38:20] -rw-r--r--. 2 boinc boinc    498164 Oct  4 20:57 input.tar.gz
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc      6347 Oct  4 20:57 init_data.xml
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc         0 Oct  4 20:57 boinc_lockfile
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc      2530 Oct  4 20:57 pandaJob.out
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc       424 Oct  4 20:57 setup.sh.local
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc   1024508 Oct  4 20:58 agis_schedconf.cvmfs.json
[2024-10-05 03:38:20] drwx------. 4 boinc boinc      4096 Oct  4 20:58 pilot3
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc 267090408 Oct  5 03:32 HITS.41481181._005560.pool.root.1
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc       532 Oct  5 03:32 boinc_task_state.xml
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc      1017 Oct  5 03:33 memory_monitor_summary.json
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc   1615815 Oct  5 03:33 agis_ddmendpoints.agis.ALL.json
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc    463968 Oct  5 03:34 log.41481181._005560.job.log.tgz.1
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc        95 Oct  5 03:35 pilot_heartbeat.json
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc      7686 Oct  5 03:35 heartbeat.json
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc      4274 Oct  5 03:35 pilotlog.txt
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc   2253683 Oct  5 03:35 log.41481181._005560.job.log.1
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc       357 Oct  5 03:35 output.list
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc       620 Oct  5 03:35 runtime_log
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc   2734080 Oct  5 03:35 result.tar.gz
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc     10999 Oct  5 03:35 runtime_log.err
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc       646 Oct  5 03:35 J6OKDmkYOG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDm8voKDm3xschm.diag
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc      8192 Oct  5 03:38 boinc_mmap_file
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc        28 Oct  5 03:38 wrapper_checkpoint.txt
[2024-10-05 03:38:20] -rw-r--r--. 1 boinc boinc     21513 Oct  5 03:38 stderr.txt
[2024-10-05 03:38:20] HITS file was successfully produced:
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc 267090408 Oct  5 03:32 shared/HITS.pool.root.1
[2024-10-05 03:38:20]  *** Contents of shared directory: ***
[2024-10-05 03:38:20] total 885668
[2024-10-05 03:38:20] -rw-r--r--. 2 boinc boinc 636574616 Oct  4 20:57 ATLAS.root_0
[2024-10-05 03:38:20] -rw-r--r--. 2 boinc boinc     17537 Oct  4 20:57 start_atlas.sh
[2024-10-05 03:38:20] -rw-r--r--. 2 boinc boinc    498164 Oct  4 20:57 input.tar.gz
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc 267090408 Oct  5 03:32 HITS.pool.root.1
[2024-10-05 03:38:20] -rw-------. 1 boinc boinc   2734080 Oct  5 03:35 result.tar.gz
03:38:21 (14956): run_atlas exited; CPU time 88829.702480
03:38:21 (14956): called boinc_finish(0)

</stderr_txt>
]]>

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