Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:46:20 (507669): wrapper (7.7.26015): starting
20:46:20 (507669): wrapper: running run_atlas (--nthreads 6)
[2024-10-03 20:46:20] Arguments: --nthreads 6
[2024-10-03 20:46:20] Threads: 6
[2024-10-03 20:46:20] Checking for CVMFS
[2024-10-03 20:46:21] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-03 20:46:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-03 20:46:21] Running cvmfs_config stat atlas.cern.ch
[2024-10-03 20:46:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-03 20:46:21] 2.11.5.0 59890 605 56588 137926 0 56 20833424 20971521 928 130560 0 1042553 99.994 172682 1125 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-10-03 20:46:21] CVMFS is ok
[2024-10-03 20:46:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-03 20:46:21] Small home clusters do not require a local http proxy but it is suggested if
[2024-10-03 20:46:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-10-03 20:46:21] Further information can be found at the LHC@home message board.
[2024-10-03 20:46:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-03 20:46:21] Checking for apptainer binary...
[2024-10-03 20:46:21] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-03 20:46:21] Running /usr/bin/apptainer --version
[2024-10-03 20:46:21] apptainer version 1.3.4-1.el9
[2024-10-03 20:46:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-03 20:46:21] testio005
[2024-10-03 20:46:21] apptainer works
[2024-10-03 20:46:21] Set ATHENA_PROC_NUMBER=6
[2024-10-03 20:46:21] Set ATHENA_CORE_NUMBER=6
[2024-10-03 20:46:21] Starting ATLAS job with PandaID=6354751727
[2024-10-03 20:46:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 23:41:56]  *** The last 200 lines of the pilot log: ***
[2024-10-03 23:41:56] 2024-10-03 14:41:40,299 | INFO     | intersect: -66232524001.68504
[2024-10-03 23:41:56] 2024-10-03 14:41:40,300 | INFO     | chi2: 5.137273223290334
[2024-10-03 23:41:56] 2024-10-03 14:41:40,300 | INFO     | model: linear, x: [1727956018.0, 1727956079.0, 1727956140.0, 1727956201.0, 1727956262.0, 1727956323.0, 1727956384.0, 1727956445.0, 1727956506.0, 1727956567.0, 1727
[2024-10-03 23:41:56] 2024-10-03 14:41:40,300 | INFO     | sum of square deviations: 1444149868.0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,301 | INFO     | sum of deviations: 69082565148.0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,301 | INFO     | mean x: 1727961081.0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,301 | INFO     | mean y: 2421892.4670658684
[2024-10-03 23:41:56] 2024-10-03 14:41:40,301 | INFO     | -- intersect: -82656578116.10477
[2024-10-03 23:41:56] 2024-10-03 14:41:40,301 | INFO     | intersect: -82656578116.10477
[2024-10-03 23:41:56] 2024-10-03 14:41:40,301 | INFO     | chi2: 4.48306227815634
[2024-10-03 23:41:56] 2024-10-03 14:41:40,302 | INFO     | current chi2=4.48306227815634 (change=12.734595118828103 %)
[2024-10-03 23:41:56] 2024-10-03 14:41:40,302 | INFO     | right removable region: 166
[2024-10-03 23:41:56] 2024-10-03 14:41:40,302 | INFO     | model: linear, x: [1727956323.0, 1727956384.0, 1727956445.0, 1727956506.0, 1727956567.0, 1727956628.0, 1727956689.0, 1727956750.0, 1727956811.0, 1727956872.0, 1727
[2024-10-03 23:41:56] 2024-10-03 14:41:40,302 | INFO     | sum of square deviations: 1444149868.0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,303 | INFO     | sum of deviations: 21262867966.000008
[2024-10-03 23:41:56] 2024-10-03 14:41:40,303 | INFO     | mean x: 1727961386.0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,303 | INFO     | mean y: 2456935.736526946
[2024-10-03 23:41:56] 2024-10-03 14:41:40,303 | INFO     | -- intersect: -25439095644.77749
[2024-10-03 23:41:56] 2024-10-03 14:41:40,303 | INFO     | intersect: -25439095644.77749
[2024-10-03 23:41:56] 2024-10-03 14:41:40,304 | INFO     | chi2: 2.812089090813895
[2024-10-03 23:41:56] 2024-10-03 14:41:40,304 | INFO     | current chi2=2.812089090813895 (change=45.26105642843733 %)
[2024-10-03 23:41:56] 2024-10-03 14:41:40,304 | INFO     | model: linear, x: [1727956628.0, 1727956689.0, 1727956750.0, 1727956811.0, 1727956872.0, 1727956933.0, 1727956994.0, 1727957055.0, 1727957116.0, 1727957177.0, 1727
[2024-10-03 23:41:56] 2024-10-03 14:41:40,304 | INFO     | sum of square deviations: 1318277740.5
[2024-10-03 23:41:56] 2024-10-03 14:41:40,305 | INFO     | sum of deviations: -6205275507.999998
[2024-10-03 23:41:56] 2024-10-03 14:41:40,305 | INFO     | mean x: 1727961538.5
[2024-10-03 23:41:56] 2024-10-03 14:41:40,305 | INFO     | mean y: 2490201.049382716
[2024-10-03 23:41:56] 2024-10-03 14:41:40,305 | INFO     | -- intersect: 8136191532.874341
[2024-10-03 23:41:56] 2024-10-03 14:41:40,305 | INFO     | intersect: 8136191532.874341
[2024-10-03 23:41:56] 2024-10-03 14:41:40,306 | INFO     | chi2: 1.7402249625473987
[2024-10-03 23:41:56] 2024-10-03 14:41:40,306 | INFO     | current chi2=1.7402249625473987 (change=38.11629339084238 %)
[2024-10-03 23:41:56] 2024-10-03 14:41:40,306 | INFO     | model: linear, x: [1727956933.0, 1727956994.0, 1727957055.0, 1727957116.0, 1727957177.0, 1727957238.0, 1727957299.0, 1727957360.0, 1727957421.0, 1727957482.0, 1727
[2024-10-03 23:41:56] 2024-10-03 14:41:40,306 | INFO     | sum of square deviations: 1199940638.0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,307 | INFO     | sum of deviations: -28866359487.999996
[2024-10-03 23:41:56] 2024-10-03 14:41:40,307 | INFO     | mean x: 1727961691.0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,307 | INFO     | mean y: 2519299.178343949
[2024-10-03 23:41:56] 2024-10-03 14:41:40,307 | INFO     | -- intersect: 41571211761.36193
[2024-10-03 23:41:56] 2024-10-03 14:41:40,307 | INFO     | intersect: 41571211761.36193
[2024-10-03 23:41:56] 2024-10-03 14:41:40,308 | INFO     | chi2: 0.9064431952028555
[2024-10-03 23:41:56] 2024-10-03 14:41:40,308 | INFO     | current chi2=0.9064431952028555 (change=47.91229785165395 %)
[2024-10-03 23:41:56] 2024-10-03 14:41:40,308 | INFO     | model: linear, x: [1727957238.0, 1727957299.0, 1727957360.0, 1727957421.0, 1727957482.0, 1727957543.0, 1727957604.0, 1727957665.0, 1727957726.0, 1727957787.0, 1727
[2024-10-03 23:41:56] 2024-10-03 14:41:40,308 | INFO     | sum of square deviations: 1088905998.0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,309 | INFO     | sum of deviations: -24457008251.5
[2024-10-03 23:41:56] 2024-10-03 14:41:40,309 | INFO     | mean x: 1727961843.5
[2024-10-03 23:41:56] 2024-10-03 14:41:40,309 | INFO     | mean y: 2513171.9407894737
[2024-10-03 23:41:56] 2024-10-03 14:41:40,309 | INFO     | -- intersect: 38812821079.489525
[2024-10-03 23:41:56] 2024-10-03 14:41:40,309 | INFO     | intersect: 38812821079.489525
[2024-10-03 23:41:56] 2024-10-03 14:41:40,310 | INFO     | chi2: 0.8881143487269745
[2024-10-03 23:41:56] 2024-10-03 14:41:40,310 | INFO     | current chi2=0.8881143487269745 (change=2.0220623391385493 %)
[2024-10-03 23:41:56] 2024-10-03 14:41:40,310 | INFO     | left removable region: 40
[2024-10-03 23:41:56] 2024-10-03 14:41:40,310 | INFO     | model: linear, x: [1727958458.0, 1727958519.0, 1727958580.0, 1727958641.0, 1727958702.0, 1727958763.0, 1727958824.0, 1727958885.0, 1727958946.0, 1727959007.0, 1727
[2024-10-03 23:41:56] 2024-10-03 14:41:40,310 | INFO     | sum of square deviations: 620244187.5
[2024-10-03 23:41:56] 2024-10-03 14:41:40,311 | INFO     | sum of deviations: 2017920992.0000005
[2024-10-03 23:41:56] 2024-10-03 14:41:40,311 | INFO     | mean x: 1727962270.5
[2024-10-03 23:41:56] 2024-10-03 14:41:40,311 | INFO     | mean y: 2500422.0634920634
[2024-10-03 23:41:56] 2024-10-03 14:41:40,311 | INFO     | -- intersect: -5619303714.5950775
[2024-10-03 23:41:56] 2024-10-03 14:41:40,311 | INFO     | intersect: -5619303714.5950775
[2024-10-03 23:41:56] 2024-10-03 14:41:40,311 | INFO     | chi2: 0.002929001126959219
[2024-10-03 23:41:56] 2024-10-03 14:41:40,312 | INFO     | -- intersect: -5619303714.5950775
[2024-10-03 23:41:56] 2024-10-03 14:41:40,312 | INFO     | current memory leak: 3.25 B/s (using 126 data points, chi2=0.00)
[2024-10-03 23:41:56] 2024-10-03 14:41:40,312 | INFO     | ..............................
[2024-10-03 23:41:56] 2024-10-03 14:41:40,312 | INFO     | . Timing measurements:
[2024-10-03 23:41:56] 2024-10-03 14:41:40,312 | INFO     | . get job = 0 s
[2024-10-03 23:41:56] 2024-10-03 14:41:40,312 | INFO     | . initial setup = 7 s
[2024-10-03 23:41:56] 2024-10-03 14:41:40,313 | INFO     | . payload setup = 4 s
[2024-10-03 23:41:56] 2024-10-03 14:41:40,313 | INFO     | . stage-in = 0 s
[2024-10-03 23:41:56] 2024-10-03 14:41:40,313 | INFO     | . payload execution = 10459 s
[2024-10-03 23:41:56] 2024-10-03 14:41:40,313 | INFO     | . stage-out = 0 s
[2024-10-03 23:41:56] 2024-10-03 14:41:40,313 | INFO     | . log creation = 0 s
[2024-10-03 23:41:56] 2024-10-03 14:41:40,313 | INFO     | ..............................
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | 
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | job summary report
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | --------------------------------------------------
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | PanDA job id: 6354751727
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | task id: 41481181
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | errors: (none)
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | pilot state: finished 
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | transexitcode: 0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | exeerrorcode: 0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | exeerrordiag: 
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | exitcode: 0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | exitmsg: OK
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | cpuconsumptiontime: 55185 s
[2024-10-03 23:41:56] 2024-10-03 14:41:40,399 | INFO     | nevents: 400
[2024-10-03 23:41:56] 2024-10-03 14:41:40,400 | INFO     | neventsw: 0
[2024-10-03 23:41:56] 2024-10-03 14:41:40,400 | INFO     | pid: 517928
[2024-10-03 23:41:56] 2024-10-03 14:41:40,400 | INFO     | pgrp: 517928
[2024-10-03 23:41:56] 2024-10-03 14:41:40,400 | INFO     | corecount: 6
[2024-10-03 23:41:56] 2024-10-03 14:41:40,400 | INFO     | event service: False
[2024-10-03 23:41:56] 2024-10-03 14:41:40,400 | INFO     | sizes: {0: 2435314, 1: 2435513, 4: 2435719, 11: 2435747, 10467: 2464630, 10468: 2473654, 10471: 2473838, 10490: 2474008}
[2024-10-03 23:41:56] 2024-10-03 14:41:40,400 | INFO     | --------------------------------------------------
[2024-10-03 23:41:56] 2024-10-03 14:41:40,400 | INFO     | 
[2024-10-03 23:41:56] 2024-10-03 14:41:40,400 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2024-10-03 23:41:56] 2024-10-03 14:41:40,417 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,418 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,418 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,418 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,419 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 23:41:56] 2024-10-03 14:41:40,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,419 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 23:41:56] 2024-10-03 14:41:40,419 | INFO     | job 6354751727 has completed (purged errors)
[2024-10-03 23:41:56] 2024-10-03 14:41:40,420 | INFO     | overall cleanup function is called
[2024-10-03 23:41:56] 2024-10-03 14:41:41,427 | INFO     | --- collectZombieJob: --- 10, [517928]
[2024-10-03 23:41:56] 2024-10-03 14:41:41,427 | INFO     | zombie collector waiting for pid 517928
[2024-10-03 23:41:56] 2024-10-03 14:41:41,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 23:41:56] 2024-10-03 14:41:41,427 | INFO     | collected zombie processes
[2024-10-03 23:41:56] 2024-10-03 14:41:41,427 | INFO     | will  attempt to kill all subprocesses of pid=517928
[2024-10-03 23:41:56] 2024-10-03 14:41:41,497 | INFO     | process IDs to be killed: [517928] (in reverse order)
[2024-10-03 23:41:56] 2024-10-03 14:41:41,547 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 23:41:56] 2024-10-03 14:41:41,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 23:41:56] 2024-10-03 14:41:41,550 | INFO     | did not find any defunct processes belonging to 517928
[2024-10-03 23:41:56] 2024-10-03 14:41:41,554 | INFO     | did not find any defunct processes belonging to 517928
[2024-10-03 23:41:56] 2024-10-03 14:41:41,554 | INFO     | ready for new job
[2024-10-03 23:41:56] 2024-10-03 14:41:41,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 23:41:56] 2024-10-03 14:41:41,555 | INFO     | *************************************
[2024-10-03 23:41:56] 2024-10-03 14:41:41,555 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 23:41:56] 2024-10-03 14:41:41,555 | INFO     | *************************************
[2024-10-03 23:41:56] 2024-10-03 14:41:41,555 | INFO     | 
[2024-10-03 23:41:56] 2024-10-03 14:41:41,568 | INFO     | architecture information:
[2024-10-03 23:41:56] 2024-10-03 14:41:41,569 | INFO     | executing command: cat /etc/os-release
[2024-10-03 23:41:56] 2024-10-03 14:41:41,584 | INFO     | cat /etc/os-release:
[2024-10-03 23:41:56] NAME="CentOS Linux"
[2024-10-03 23:41:56] VERSION="7 (Core)"
[2024-10-03 23:41:56] ID="centos"
[2024-10-03 23:41:56] ID_LIKE="rhel fedora"
[2024-10-03 23:41:56] VERSION_ID="7"
[2024-10-03 23:41:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 23:41:56] ANSI_COLOR="0;31"
[2024-10-03 23:41:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 23:41:56] HOME_URL="https://www.centos.org/"
[2024-10-03 23:41:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 23:41:56] 
[2024-10-03 23:41:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 23:41:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 23:41:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 23:41:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 23:41:56] 
[2024-10-03 23:41:56] 2024-10-03 14:41:41,584 | INFO     | *************************************
[2024-10-03 23:41:56] 2024-10-03 14:41:42,087 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2024-10-03 23:41:56] 2024-10-03 14:41:42,103 | INFO     | sufficient remaining disk space (90453311488 B)
[2024-10-03 23:41:56] 2024-10-03 14:41:42,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 23:41:56] 2024-10-03 14:41:42,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 23:41:56] 2024-10-03 14:41:42,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 23:41:56] 2024-10-03 14:41:42,103 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 23:41:56] 2024-10-03 14:41:42,104 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-03 23:41:56] 2024-10-03 14:41:42,104 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 23:41:56] 2024-10-03 14:41:42,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 23:41:56] 2024-10-03 14:41:42,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 23:41:56] 2024-10-03 14:41:42,657 | INFO     | all job control threads have been joined
[2024-10-03 23:41:56] 2024-10-03 14:41:42,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 23:41:56] 2024-10-03 14:41:42,738 | INFO     | aborting loop
[2024-10-03 23:41:56] 2024-10-03 14:41:42,954 | INFO     | all data control threads have been joined
[2024-10-03 23:41:56] 2024-10-03 14:41:43,108 | INFO     | [job] retrieve thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:43,109 | INFO     | [job] queue monitor thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:43,245 | INFO     | all payload control threads have been joined
[2024-10-03 23:41:56] 2024-10-03 14:41:43,457 | INFO     | [data] copytool_in thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:43,579 | INFO     | [payload] failed_post thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:43,663 | INFO     | [job] control thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:43,743 | INFO     | [job] job monitor thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:43,842 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:43,959 | INFO     | [data] control thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:44,109 | INFO     | [data] copytool_out thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:44,124 | INFO     | [payload] validate_post thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:44,127 | INFO     | [job] validate thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:44,250 | INFO     | [payload] control thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:44,284 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:44,433 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:44,481 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:45,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 23:41:56] 2024-10-03 14:41:49,258 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 23:41:56] 2024-10-03 14:41:50,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341324908352)>', '<ExcThread(monitor, started 140340824610560)>']
[2024-10-03 23:41:56] 2024-10-03 14:41:51,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 23:41:56] 2024-10-03 14:41:51,144 | INFO     | [monitor] control thread has ended
[2024-10-03 23:41:56] 2024-10-03 14:41:55,952 | INFO     | all workflow threads have been joined
[2024-10-03 23:41:56] 2024-10-03 14:41:55,952 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 23:41:56] 2024-10-03 14:41:55,952 | INFO     | traces error code: 0
[2024-10-03 23:41:56] 2024-10-03 14:41:55,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 23:41:56] 2024-10-03 14:41:56,047 [wrapper] ==== pilot stdout END ====
[2024-10-03 23:41:56] 2024-10-03 14:41:56,050 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 23:41:56] 2024-10-03 14:41:56,052 [wrapper] pilotpid: 511395
[2024-10-03 23:41:56] 2024-10-03 14:41:56,055 [wrapper] Pilot exit status: 0
[2024-10-03 23:41:56] 2024-10-03 14:41:56,064 [wrapper] pandaids: 6354751727
[2024-10-03 23:41:56] 2024-10-03 14:41:56,091 [wrapper] cleanup supervisor_pilot  571061 511396
[2024-10-03 23:41:56] 2024-10-03 14:41:56,093 [wrapper] Test setup, not cleaning
[2024-10-03 23:41:56] 2024-10-03 14:41:56,096 [wrapper] ==== wrapper stdout END ====
[2024-10-03 23:41:56] 2024-10-03 14:41:56,098 [wrapper] ==== wrapper stderr END ====
[2024-10-03 23:41:56] 2024-10-03 14:41:56,103 [wrapper] apfmon messages muted
[2024-10-03 23:41:56]  *** Error codes and diagnostics ***
[2024-10-03 23:41:56]     "exeErrorCode": 0,
[2024-10-03 23:41:56]     "exeErrorDiag": "",
[2024-10-03 23:41:56]     "pilotErrorCode": 0,
[2024-10-03 23:41:56]     "pilotErrorDiag": "",
[2024-10-03 23:41:56]  *** Listing of results directory ***
[2024-10-03 23:41:56] total 880284
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc    484599 Oct  3 08:34 pilot3.tar.gz
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc      5653 Oct  3 08:41 queuedata.json
[2024-10-03 23:41:56] -rwx------. 1 boinc boinc     33814 Oct  3 08:41 runpilot2-wrapper.sh
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc       100 Oct  3 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 23:41:56] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 20:46 run_atlas
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc       105 Oct  3 20:46 job.xml
[2024-10-03 23:41:56] -rw-r--r--. 2 boinc boinc 632594915 Oct  3 20:46 EVNT.41466530._000091.pool.root.1
[2024-10-03 23:41:56] -rw-r--r--. 2 boinc boinc     17537 Oct  3 20:46 start_atlas.sh
[2024-10-03 23:41:56] drwxrwx--x. 2 boinc boinc        68 Oct  3 20:46 shared
[2024-10-03 23:41:56] -rw-r--r--. 2 boinc boinc    498174 Oct  3 20:46 input.tar.gz
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc         0 Oct  3 20:46 boinc_lockfile
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc      2535 Oct  3 20:46 pandaJob.out
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc       424 Oct  3 20:46 setup.sh.local
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc   1024595 Oct  3 20:46 agis_schedconf.cvmfs.json
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc   1615815 Oct  3 20:46 agis_ddmendpoints.agis.ALL.json
[2024-10-03 23:41:56] drwx------. 4 boinc boinc      4096 Oct  3 20:46 pilot3
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc      9352 Oct  3 20:46 init_data.xml
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc 262185366 Oct  3 23:40 HITS.41481181._005464.pool.root.1
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc        95 Oct  3 23:40 pilot_heartbeat.json
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc       531 Oct  3 23:41 boinc_task_state.xml
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc      1021 Oct  3 23:41 memory_monitor_summary.json
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc    367135 Oct  3 23:41 log.41481181._005464.job.log.tgz.1
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc      8192 Oct  3 23:41 boinc_mmap_file
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc        28 Oct  3 23:41 wrapper_checkpoint.txt
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc      7669 Oct  3 23:41 heartbeat.json
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc      4334 Oct  3 23:41 pilotlog.txt
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc   1017223 Oct  3 23:41 log.41481181._005464.job.log.1
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc       357 Oct  3 23:41 output.list
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc       620 Oct  3 23:41 runtime_log
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc   1402880 Oct  3 23:41 result.tar.gz
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc     10958 Oct  3 23:41 runtime_log.err
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc       635 Oct  3 23:41 6fxLDm88NG6n7OlckoGmwREmGgkVDo1bjSoqOlfODmYrsKDmCh3Vfm.diag
[2024-10-03 23:41:56] -rw-r--r--. 1 boinc boinc     21608 Oct  3 23:41 stderr.txt
[2024-10-03 23:41:56] HITS file was successfully produced:
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc 262185366 Oct  3 23:40 shared/HITS.pool.root.1
[2024-10-03 23:41:56]  *** Contents of shared directory: ***
[2024-10-03 23:41:56] total 875696
[2024-10-03 23:41:56] -rw-r--r--. 2 boinc boinc 632594915 Oct  3 20:46 ATLAS.root_0
[2024-10-03 23:41:56] -rw-r--r--. 2 boinc boinc     17537 Oct  3 20:46 start_atlas.sh
[2024-10-03 23:41:56] -rw-r--r--. 2 boinc boinc    498174 Oct  3 20:46 input.tar.gz
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc 262185366 Oct  3 23:40 HITS.pool.root.1
[2024-10-03 23:41:56] -rw-------. 1 boinc boinc   1402880 Oct  3 23:41 result.tar.gz
23:41:57 (507669): run_atlas exited; CPU time 55111.899371
23:41:57 (507669): called boinc_finish(0)

</stderr_txt>
]]>

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