Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-10-02 23:57:37 (15568): Detected: vboxwrapper 26206
2024-10-02 23:57:37 (15568): Detected: BOINC client v8.0.2
2024-10-02 23:57:38 (15568): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-10-02 23:57:38 (15568): Successfully copied 'init_data.xml' to the shared directory.
2024-10-02 23:57:38 (15568): Create VM. (boinc_7d1d3a8c6221b380, slot#56)
2024-10-02 23:57:39 (15568): Setting Memory Size for VM. (4800MB)
2024-10-02 23:57:39 (15568): Setting CPU Count for VM. (8)
2024-10-02 23:57:39 (15568): Setting Chipset Options for VM.
2024-10-02 23:57:40 (15568): Setting Graphics Controller Options for VM.
2024-10-02 23:57:40 (15568): Setting Boot Options for VM.
2024-10-02 23:57:40 (15568): Setting Network Configuration for NAT.
2024-10-02 23:57:40 (15568): Enabling VM Network Access.
2024-10-02 23:57:41 (15568): Disabling USB Support for VM.
2024-10-02 23:57:41 (15568): Disabling COM Port Support for VM.
2024-10-02 23:57:41 (15568): Disabling LPT Port Support for VM.
2024-10-02 23:57:41 (15568): Disabling Audio Support for VM.
2024-10-02 23:57:42 (15568): Disabling Clipboard Support for VM.
2024-10-02 23:57:42 (15568): Disabling Drag and Drop Support for VM.
2024-10-02 23:57:42 (15568): Adding storage controller(s) to VM.
2024-10-02 23:57:42 (15568): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-10-02 23:57:43 (15568): Adding VirtualBox Guest Additions to VM.
2024-10-02 23:57:43 (15568): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-10-02 23:57:44 (15568): forwarding host port 60369 to guest port 80
2024-10-02 23:57:44 (15568): Enabling remote desktop for VM.
2024-10-02 23:57:44 (15568): Required extension pack not installed, remote desktop not enabled.
2024-10-02 23:57:44 (15568): Enabling shared directory for VM.
2024-10-02 23:57:45 (15568): Starting VM using VBoxManage interface. (boinc_7d1d3a8c6221b380, slot#56)
2024-10-02 23:57:51 (15568): Successfully started VM. (PID = '2136')
2024-10-02 23:57:51 (15568): Reporting VM Process ID to BOINC.
2024-10-02 23:57:51 (15568): Guest Log: BIOS: VirtualBox 7.0.18
2024-10-02 23:57:51 (15568): Guest Log: CPUID EDX: 0x178bfbff
2024-10-02 23:57:51 (15568): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-10-02 23:57:51 (15568): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-10-02 23:57:51 (15568): VM state change detected. (old = 'poweredoff', new = 'running')
2024-10-02 23:57:51 (15568): Detected: Web Application Enabled (http://localhost:60369)
2024-10-02 23:57:51 (15568): Preference change detected
2024-10-02 23:57:51 (15568): Setting CPU throttle for VM. (100%)
2024-10-02 23:57:51 (15568): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2024-10-02 23:57:53 (15568): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-10-02 23:57:53 (15568): Guest Log: BIOS: Booting from Hard Disk...
2024-10-02 23:57:56 (15568): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-10-02 23:57:56 (15568): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-10-02 23:57:56 (15568): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-10-02 23:58:04 (15568): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-10-02 23:58:04 (15568): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-10-02 23:58:15 (15568): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-10-02 23:58:15 (15568): Guest Log: 00:00:00.000209 main     Log opened 2024-10-02T23:58:13.323211000Z
2024-10-02 23:58:15 (15568): Guest Log: 00:00:00.000433 main     OS Product: Linux
2024-10-02 23:58:15 (15568): Guest Log: 00:00:00.000495 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-10-02 23:58:15 (15568): Guest Log: 00:00:00.000547 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-10-02 23:58:15 (15568): Guest Log: 00:00:00.000600 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-10-02 23:58:15 (15568): Guest Log: 00:00:00.000602 main     Process ID: 1369
2024-10-02 23:58:15 (15568): Guest Log: 00:00:00.000604 main     Package type: LINUX_64BITS_GENERIC
2024-10-02 23:58:15 (15568): Guest Log: 00:00:00.001852 main     5.2.32 r132073 started. Verbose level = 0
2024-10-02 23:58:15 (15568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-10-02 23:58:15 (15568): Guest Log: [INFO] Mounting shared directory
2024-10-02 23:58:15 (15568): Guest Log: [INFO] Checking for init_data.xml
2024-10-02 23:58:21 (15568): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-10-02 23:58:21 (15568): Guest Log: [INFO] Detected branch: prod
2024-10-02 23:58:21 (15568): Guest Log: This is the prod version of the ATLAS job wrapper
2024-10-02 23:58:21 (15568): Guest Log: Copying input files
2024-10-02 23:58:25 (15568): Guest Log: 00:00:10.004650 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 476 193 000ns (GuestNow=1 727 906 304 850 672 000 ns GuestLast=1 727 913 493 326 865 000 ns fSetTimeLastLoop=true )
2024-10-02 23:58:26 (15568): Guest Log: Copied input files into RunAtlas.
2024-10-02 23:58:26 (15568): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-10-02 23:58:26 (15568): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-10-02 23:58:26 (15568): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-10-02 23:58:26 (15568): Guest Log: Further information can be found at the LHC@home message board.
2024-10-02 23:58:36 (15568): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-10-02 23:58:37 (15568): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-10-02 23:58:37 (15568): Guest Log: 2.6.3.0 1647 0 30164 137905 4 1 3117398 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2024-10-02 23:58:38 (15568): Guest Log: copied the webapp to /var/www
2024-10-02 23:58:38 (15568): Guest Log: ATHENA_PROC_NUMBER=8
2024-10-02 23:58:38 (15568): Guest Log: ATHENA_CORE_NUMBER=8
2024-10-02 23:58:38 (15568): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-10-02 23:58:38 (15568): Guest Log:  *** Starting ATLAS job. (PandaID=6354560995 taskID=41481181) ***
2024-10-03 01:38:05 (15568): Status Report: Elapsed Time: '6000.000000'
2024-10-03 01:38:05 (15568): Status Report: CPU Time: '29466.546875'
2024-10-03 03:18:24 (15568): Status Report: Elapsed Time: '12000.000000'
2024-10-03 03:18:24 (15568): Status Report: CPU Time: '68684.578125'
2024-10-03 04:58:33 (15568): Status Report: Elapsed Time: '18000.000000'
2024-10-03 04:58:33 (15568): Status Report: CPU Time: '112799.796875'
2024-10-03 06:38:42 (15568): Status Report: Elapsed Time: '24000.000000'
2024-10-03 06:38:42 (15568): Status Report: CPU Time: '155043.343750'
2024-10-03 08:18:52 (15568): Status Report: Elapsed Time: '30000.000000'
2024-10-03 08:18:52 (15568): Status Report: CPU Time: '197642.109375'
2024-10-03 08:29:17 (15568): Guest Log:  *** Job finished ***
2024-10-03 08:29:17 (15568): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:02,242 | INFO     | [data] queue_monitor thread has finished
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:07,481 | INFO     | job.realtimelogging is not enabled
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:08,483 | INFO     | [payload] run_realtimelog thread has finished
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:10,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140222551459648)>', '<ExcThread(monitor, started 140222243247872)>']
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:11,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:11,006 | INFO     | [monitor] control thread has ended
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,009 | INFO     | all workflow threads have been joined
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,010 | INFO     | end of generic workflow (traces error code: 0)
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,010 | INFO     | traces error code: 0
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,167 [wrapper] ==== pilot stdout END ====
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,178 [wrapper] ==== wrapper stdout RESUME ====
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,194 [wrapper] pilotpid: 6032
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,204 [wrapper] Pilot exit status: 0
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,300 [wrapper] pandaids: 6354560995
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,367 [wrapper] cleanup supervisor_pilot  7533 6033
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,375 [wrapper] Test setup, not cleaning
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,385 [wrapper] ==== wrapper stdout END ====
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,393 [wrapper] ==== wrapper stderr END ====
2024-10-03 08:29:17 (15568): Guest Log: 2024-10-03 06:29:15,412 [wrapper] apfmon messages muted
2024-10-03 08:29:17 (15568): Guest Log:  *** Error codes and diagnostics ***
2024-10-03 08:29:17 (15568): Guest Log:     "exeErrorCode": 0,
2024-10-03 08:29:17 (15568): Guest Log:     "exeErrorDiag": "",
2024-10-03 08:29:17 (15568): Guest Log:     "pilotErrorCode": 0,
2024-10-03 08:29:17 (15568): Guest Log:     "pilotErrorDiag": "",
2024-10-03 08:29:17 (15568): Guest Log:  *** Listing of results directory ***
2024-10-03 08:29:17 (15568): Guest Log: total 259692
2024-10-03 08:29:17 (15568): Guest Log: -rw-r--r--. 1 atlas atlas      5653 Oct  2 20:54 queuedata.json
2024-10-03 08:29:17 (15568): Guest Log: -rw-r--r--. 1 atlas atlas    484599 Oct  2 20:55 pilot3.tar.gz
2024-10-03 08:29:17 (15568): Guest Log: -rwx------. 1 atlas atlas     33814 Oct  2 20:55 runpilot2-wrapper.sh
2024-10-03 08:29:17 (15568): Guest Log: -rwxr-xr-x. 1 atlas atlas      9144 Oct  2 21:58 init_data.xml
2024-10-03 08:29:17 (15568): Guest Log: -rwxr-xr-x. 1 atlas atlas    498177 Oct  2 21:58 input.tar.gz
2024-10-03 08:29:17 (15568): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Oct  2 21:58 start_atlas.sh
2024-10-03 08:29:17 (15568): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  2 21:58 EVNT.41466530._000062.pool.root.1 -> /data/./ATLAS.root_0
2024-10-03 08:29:17 (15568): Guest Log: -rw-r--r--. 1 atlas atlas      2536 Oct  2 21:58 pandaJob.out
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas       424 Oct  2 21:58 setup.sh.local
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas   1022889 Oct  2 21:59 agis_schedconf.cvmfs.json
2024-10-03 08:29:17 (15568): Guest Log: drwx------. 4 atlas atlas      4096 Oct  2 21:59 pilot3
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas 255195124 Oct  3 06:27 HITS.41481181._003442.pool.root.1
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas      1033 Oct  3 06:28 memory_monitor_summary.json
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas   1615815 Oct  3 06:28 agis_ddmendpoints.agis.ALL.json
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas    554772 Oct  3 06:28 log.41481181._003442.job.log.tgz.1
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas        95 Oct  3 06:28 pilot_heartbeat.json
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas      7754 Oct  3 06:28 heartbeat.json
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas      4529 Oct  3 06:29 pilotlog.txt
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas   2912350 Oct  3 06:29 log.41481181._003442.job.log.1
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas       357 Oct  3 06:29 output.list
2024-10-03 08:29:17 (15568): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  3 06:29 runtime_log
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas   3481600 Oct  3 06:29 result.tar.gz
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas       649 Oct  3 06:29 SOgMDmqYLG6n7OlckoGmwREmGgkVDo1bjSoqOlfODmfgsKDmwvQEUn.diag
2024-10-03 08:29:17 (15568): Guest Log: -rw-r--r--. 1 atlas atlas     10928 Oct  3 06:29 runtime_log.err
2024-10-03 08:29:17 (15568): Guest Log: Looking for outputfile HITS.41481181._003442.pool.root.1
2024-10-03 08:29:17 (15568): Guest Log: HITS file was successfully produced
2024-10-03 08:29:17 (15568): Guest Log: -rw-------. 1 atlas atlas 255195124 Oct  3 06:27 /home/atlas/RunAtlas/HITS.41481181._003442.pool.root.1
2024-10-03 08:29:19 (15568): Guest Log: Successfully finished the ATLAS job!
2024-10-03 08:29:19 (15568): Guest Log: Copying the results back to the shared directory!
2024-10-03 08:29:19 (15568): Guest Log:  *** Contents of shared directory: ***
2024-10-03 08:29:19 (15568): Guest Log: total 881128
2024-10-03 08:29:19 (15568): Guest Log: -rwxrwxrwx. 1 root root 643063313 Oct  2 21:57 ATLAS.root_0
2024-10-03 08:29:19 (15568): Guest Log: -rwxrwxrwx. 1 root root 255195124 Oct  3 06:29 HITS.pool.root.1
2024-10-03 08:29:19 (15568): Guest Log: -rwxrwxrwx. 1 root root      9144 Oct  2 21:57 init_data.xml
2024-10-03 08:29:19 (15568): Guest Log: -rwxrwxrwx. 1 root root    498177 Oct  2 21:57 input.tar.gz
2024-10-03 08:29:19 (15568): Guest Log: -rwxrwxrwx. 1 root root   3481600 Oct  3 06:29 result.tar.gz
2024-10-03 08:29:19 (15568): Guest Log: -rwxrwxrwx. 1 root root     17537 Oct  2 21:57 start_atlas.sh
2024-10-03 08:29:19 (15568): Guest Log:  *** Success! Shutting down the machine. ***
2024-10-03 08:29:19 (15568): VM Completion File Detected.
2024-10-03 08:29:19 (15568): Powering off VM.
2024-10-03 08:29:20 (15568): Successfully stopped VM.
2024-10-03 08:29:20 (15568): Deregistering VM. (boinc_7d1d3a8c6221b380, slot#56)
2024-10-03 08:29:20 (15568): Removing network bandwidth throttle group from VM.
2024-10-03 08:29:20 (15568): Removing VM from VirtualBox.
08:29:25 (15568): called boinc_finish(0)

</stderr_txt>
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