Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:15:54 (32636): wrapper (7.7.26015): starting
22:15:54 (32636): wrapper: running run_atlas (--nthreads 8)
[2024-10-04 22:15:54] Arguments: --nthreads 8
[2024-10-04 22:15:54] Threads: 8
[2024-10-04 22:15:54] Checking for CVMFS
[2024-10-04 22:15:55] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-04 22:15:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-04 22:15:55] Running cvmfs_config stat atlas.cern.ch
[2024-10-04 22:15:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-04 22:15:55] 2.11.2.0 20169 56170 86944 137980 0 156 19533768 25165825 4002 130560 0 40615823 99.915 21976395 9575 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-04 22:15:55] CVMFS is ok
[2024-10-04 22:15:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-04 22:15:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-04 22:15:55] Further information can be found at the LHC@home message board.
[2024-10-04 22:15:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-04 22:15:55] Checking for apptainer binary...
[2024-10-04 22:15:55] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-04 22:15:55] Running /usr/bin/apptainer --version
[2024-10-04 22:15:55] apptainer version 1.3.2-1.el7
[2024-10-04 22:15:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-04 22:15:57] cg-vwn471.simple-grid.lan
[2024-10-04 22:15:57] apptainer works
[2024-10-04 22:15:57] Set ATHENA_PROC_NUMBER=8
[2024-10-04 22:15:57] Set ATHENA_CORE_NUMBER=8
[2024-10-04 22:15:57] Starting ATLAS job with PandaID=6354563384
[2024-10-04 22:15:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-05 04:57:51]  *** The last 200 lines of the pilot log: ***
[2024-10-05 04:57:51] 2024-10-05 02:39:56,257 | INFO     | chi2: 6.335589207754143
[2024-10-05 04:57:51] 2024-10-05 02:39:56,258 | INFO     | model: linear, x: [1728073021.0, 1728073082.0, 1728073143.0, 1728073204.0, 1728073265.0, 1728073326.0, 1728073387.0, 1728073448.0, 1728073509.0, 1728073570.0, 1728
[2024-10-05 04:57:51] 2024-10-05 02:39:56,258 | INFO     | sum of square deviations: 15834231770.0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,262 | INFO     | sum of deviations: 112595067457.99997
[2024-10-05 04:57:51] 2024-10-05 02:39:56,262 | INFO     | mean x: 1728084306.0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,262 | INFO     | mean y: 2542219.485175202
[2024-10-05 04:57:51] 2024-10-05 02:39:56,262 | INFO     | -- intersect: -12285630129.730164
[2024-10-05 04:57:51] 2024-10-05 02:39:56,262 | INFO     | intersect: -12285630129.730164
[2024-10-05 04:57:51] 2024-10-05 02:39:56,263 | INFO     | chi2: 4.7134806841884656
[2024-10-05 04:57:51] 2024-10-05 02:39:56,263 | INFO     | current chi2=4.7134806841884656 (change=25.60312025249957 %)
[2024-10-05 04:57:51] 2024-10-05 02:39:56,263 | INFO     | model: linear, x: [1728073021.0, 1728073082.0, 1728073143.0, 1728073204.0, 1728073265.0, 1728073326.0, 1728073387.0, 1728073448.0, 1728073509.0, 1728073570.0, 1728
[2024-10-05 04:57:51] 2024-10-05 02:39:56,264 | INFO     | sum of square deviations: 15202619927.5
[2024-10-05 04:57:51] 2024-10-05 02:39:56,268 | INFO     | sum of deviations: 111031328371.00002
[2024-10-05 04:57:51] 2024-10-05 02:39:56,268 | INFO     | mean x: 1728084153.5
[2024-10-05 04:57:51] 2024-10-05 02:39:56,268 | INFO     | mean y: 2541841.9071038254
[2024-10-05 04:57:51] 2024-10-05 02:39:56,268 | INFO     | -- intersect: -12618406390.371202
[2024-10-05 04:57:51] 2024-10-05 02:39:56,268 | INFO     | intersect: -12618406390.371202
[2024-10-05 04:57:51] 2024-10-05 02:39:56,269 | INFO     | chi2: 4.7160650951167264
[2024-10-05 04:57:51] 2024-10-05 02:39:56,269 | INFO     | current chi2=4.7160650951167264 (change=-0.05483020089443434 %)
[2024-10-05 04:57:51] 2024-10-05 02:39:56,269 | INFO     | right removable region: 365
[2024-10-05 04:57:51] 2024-10-05 02:39:56,269 | INFO     | model: linear, x: [1728073326.0, 1728073387.0, 1728073448.0, 1728073509.0, 1728073570.0, 1728073631.0, 1728073692.0, 1728073753.0, 1728073814.0, 1728073875.0, 1728
[2024-10-05 04:57:51] 2024-10-05 02:39:56,270 | INFO     | sum of square deviations: 15834231770.0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,274 | INFO     | sum of deviations: -38788123070.000015
[2024-10-05 04:57:51] 2024-10-05 02:39:56,274 | INFO     | mean x: 1728084611.0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,274 | INFO     | mean y: 2553412.846361186
[2024-10-05 04:57:51] 2024-10-05 02:39:56,274 | INFO     | -- intersect: 4235733748.9986024
[2024-10-05 04:57:51] 2024-10-05 02:39:56,274 | INFO     | intersect: 4235733748.9986024
[2024-10-05 04:57:51] 2024-10-05 02:39:56,275 | INFO     | chi2: 3.6672551737421073
[2024-10-05 04:57:51] 2024-10-05 02:39:56,275 | INFO     | current chi2=3.6672551737421073 (change=42.116588473669594 %)
[2024-10-05 04:57:51] 2024-10-05 02:39:56,275 | INFO     | model: linear, x: [1728073631.0, 1728073692.0, 1728073753.0, 1728073814.0, 1728073875.0, 1728073936.0, 1728073997.0, 1728074058.0, 1728074119.0, 1728074180.0, 1728
[2024-10-05 04:57:51] 2024-10-05 02:39:56,275 | INFO     | sum of square deviations: 15202619927.5
[2024-10-05 04:57:51] 2024-10-05 02:39:56,279 | INFO     | sum of deviations: -111730583327.0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,280 | INFO     | mean x: 1728084763.5
[2024-10-05 04:57:51] 2024-10-05 02:39:56,280 | INFO     | mean y: 2571024.644808743
[2024-10-05 04:57:51] 2024-10-05 02:39:56,280 | INFO     | -- intersect: 12703008158.845198
[2024-10-05 04:57:51] 2024-10-05 02:39:56,280 | INFO     | intersect: 12703008158.845198
[2024-10-05 04:57:51] 2024-10-05 02:39:56,280 | INFO     | chi2: 2.309157636003293
[2024-10-05 04:57:51] 2024-10-05 02:39:56,281 | INFO     | current chi2=2.309157636003293 (change=37.0330798757316 %)
[2024-10-05 04:57:51] 2024-10-05 02:39:56,281 | INFO     | model: linear, x: [1728073936.0, 1728073997.0, 1728074058.0, 1728074119.0, 1728074180.0, 1728074241.0, 1728074302.0, 1728074363.0, 1728074424.0, 1728074485.0, 1728
[2024-10-05 04:57:51] 2024-10-05 02:39:56,281 | INFO     | sum of square deviations: 14588031660.0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,285 | INFO     | sum of deviations: -140650781537.0001
[2024-10-05 04:57:51] 2024-10-05 02:39:56,285 | INFO     | mean x: 1728084916.0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,285 | INFO     | mean y: 2578160.3324099723
[2024-10-05 04:57:51] 2024-10-05 02:39:56,285 | INFO     | -- intersect: 16663941369.747133
[2024-10-05 04:57:51] 2024-10-05 02:39:56,286 | INFO     | intersect: 16663941369.747133
[2024-10-05 04:57:51] 2024-10-05 02:39:56,286 | INFO     | chi2: 1.9371614622302937
[2024-10-05 04:57:51] 2024-10-05 02:39:56,286 | INFO     | current chi2=1.9371614622302937 (change=16.109604990712242 %)
[2024-10-05 04:57:51] 2024-10-05 02:39:56,286 | INFO     | left removable region: 30
[2024-10-05 04:57:51] 2024-10-05 02:39:56,287 | INFO     | model: linear, x: [1728074851.0, 1728074912.0, 1728074973.0, 1728075034.0, 1728075095.0, 1728075156.0, 1728075217.0, 1728075278.0, 1728075339.0, 1728075400.0, 1728
[2024-10-05 04:57:51] 2024-10-05 02:39:56,287 | INFO     | sum of square deviations: 11657595320.0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,290 | INFO     | sum of deviations: -64955635645.99999
[2024-10-05 04:57:51] 2024-10-05 02:39:56,290 | INFO     | mean x: 1728085038.0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,291 | INFO     | mean y: 2585702.1432835823
[2024-10-05 04:57:51] 2024-10-05 02:39:56,291 | INFO     | -- intersect: 9631403568.299238
[2024-10-05 04:57:51] 2024-10-05 02:39:56,291 | INFO     | intersect: 9631403568.299238
[2024-10-05 04:57:51] 2024-10-05 02:39:56,291 | INFO     | chi2: 0.20958636125570215
[2024-10-05 04:57:51] 2024-10-05 02:39:56,291 | INFO     | -- intersect: 9631403568.299238
[2024-10-05 04:57:51] 2024-10-05 02:39:56,291 | INFO     | current memory leak: -5.57 B/s (using 335 data points, chi2=0.21)
[2024-10-05 04:57:51] 2024-10-05 02:39:56,292 | INFO     | ..............................
[2024-10-05 04:57:51] 2024-10-05 02:39:56,292 | INFO     | . Timing measurements:
[2024-10-05 04:57:51] 2024-10-05 02:39:56,293 | INFO     | . get job = 0 s
[2024-10-05 04:57:51] 2024-10-05 02:39:56,293 | INFO     | . initial setup = 2 s
[2024-10-05 04:57:51] 2024-10-05 02:39:56,293 | INFO     | . payload setup = 10 s
[2024-10-05 04:57:51] 2024-10-05 02:39:56,293 | INFO     | . stage-in = 0 s
[2024-10-05 04:57:51] 2024-10-05 02:39:56,293 | INFO     | . payload execution = 22890 s
[2024-10-05 04:57:51] 2024-10-05 02:39:56,293 | INFO     | . stage-out = 4 s
[2024-10-05 04:57:51] 2024-10-05 02:39:56,293 | INFO     | . log creation = 1 s
[2024-10-05 04:57:51] 2024-10-05 02:39:56,293 | INFO     | ..............................
[2024-10-05 04:57:51] 2024-10-05 02:39:56,898 | INFO     | 
[2024-10-05 04:57:51] 2024-10-05 02:39:56,899 | INFO     | job summary report
[2024-10-05 04:57:51] 2024-10-05 02:39:56,899 | INFO     | --------------------------------------------------
[2024-10-05 04:57:51] 2024-10-05 02:39:56,899 | INFO     | PanDA job id: 6354563384
[2024-10-05 04:57:51] 2024-10-05 02:39:56,899 | INFO     | task id: 41491264
[2024-10-05 04:57:51] 2024-10-05 02:39:56,899 | INFO     | errors: (none)
[2024-10-05 04:57:51] 2024-10-05 02:39:56,899 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-05 04:57:51] 2024-10-05 02:39:56,899 | INFO     | pilot state: finished 
[2024-10-05 04:57:51] 2024-10-05 02:39:56,899 | INFO     | transexitcode: 0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | exeerrorcode: 0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | exeerrordiag: 
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | exitcode: 0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | exitmsg: OK
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | cpuconsumptiontime: 86152 s
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | nevents: 400
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | neventsw: 0
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | pid: 15642
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | pgrp: 15642
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | corecount: 8
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | event service: False
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | sizes: {0: 2435449, 1: 2435648, 9: 2435854, 11: 2435882, 22905: 2470216, 22909: 2479240, 22911: 2479424, 22999: 2479594}
[2024-10-05 04:57:51] 2024-10-05 02:39:56,900 | INFO     | --------------------------------------------------
[2024-10-05 04:57:51] 2024-10-05 02:39:56,901 | INFO     | 
[2024-10-05 04:57:51] 2024-10-05 02:39:56,901 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-10-05 04:57:51] 2024-10-05 02:39:57,358 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,358 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,358 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,358 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,360 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-05 04:57:51] 2024-10-05 02:39:57,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,360 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-05 04:57:51] 2024-10-05 02:39:57,360 | INFO     | job 6354563384 has completed (purged errors)
[2024-10-05 04:57:51] 2024-10-05 02:39:57,360 | INFO     | overall cleanup function is called
[2024-10-05 04:57:51] 2024-10-05 02:39:58,369 | INFO     | --- collectZombieJob: --- 10, [15642]
[2024-10-05 04:57:51] 2024-10-05 02:39:58,369 | INFO     | zombie collector waiting for pid 15642
[2024-10-05 04:57:51] 2024-10-05 02:39:58,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-05 04:57:51] 2024-10-05 02:39:58,369 | INFO     | collected zombie processes
[2024-10-05 04:57:51] 2024-10-05 02:39:58,369 | INFO     | will  attempt to kill all subprocesses of pid=15642
[2024-10-05 04:57:51] 2024-10-05 02:39:59,208 | INFO     | process IDs to be killed: [15642] (in reverse order)
[2024-10-05 04:57:51] 2024-10-05 02:40:00,094 | WARNING  | found no corresponding commands to process id(s)
[2024-10-05 04:57:51] 2024-10-05 02:40:00,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-05 04:57:51] 2024-10-05 02:40:00,098 | INFO     | did not find any defunct processes belonging to 15642
[2024-10-05 04:57:51] 2024-10-05 02:40:00,100 | INFO     | did not find any defunct processes belonging to 15642
[2024-10-05 04:57:51] 2024-10-05 02:40:00,101 | INFO     | ready for new job
[2024-10-05 04:57:51] 2024-10-05 02:40:00,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-05 04:57:51] 2024-10-05 02:40:00,103 | INFO     | *************************************
[2024-10-05 04:57:51] 2024-10-05 02:40:00,103 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-05 04:57:51] 2024-10-05 02:40:00,103 | INFO     | *************************************
[2024-10-05 04:57:51] 2024-10-05 02:40:00,103 | INFO     | 
[2024-10-05 04:57:51] 2024-10-05 02:40:00,104 | INFO     | pilot is running in a VM
[2024-10-05 04:57:51] 2024-10-05 02:40:00,104 | INFO     | architecture information:
[2024-10-05 04:57:51] 2024-10-05 02:40:00,121 | INFO     | executing command: cat /etc/os-release
[2024-10-05 04:57:51] 2024-10-05 02:40:00,373 | INFO     | cat /etc/os-release:
[2024-10-05 04:57:51] NAME="CentOS Linux"
[2024-10-05 04:57:51] VERSION="7 (Core)"
[2024-10-05 04:57:51] ID="centos"
[2024-10-05 04:57:51] ID_LIKE="rhel fedora"
[2024-10-05 04:57:51] VERSION_ID="7"
[2024-10-05 04:57:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-05 04:57:51] ANSI_COLOR="0;31"
[2024-10-05 04:57:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-05 04:57:51] HOME_URL="https://www.centos.org/"
[2024-10-05 04:57:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-05 04:57:51] 
[2024-10-05 04:57:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-05 04:57:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-05 04:57:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-05 04:57:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-05 04:57:51] 
[2024-10-05 04:57:51] 2024-10-05 02:40:00,373 | INFO     | *************************************
[2024-10-05 04:57:51] 2024-10-05 02:40:00,877 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-10-05 04:57:51] 2024-10-05 02:40:01,111 | INFO     | sufficient remaining disk space (485527388160 B)
[2024-10-05 04:57:51] 2024-10-05 02:40:01,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-05 04:57:51] 2024-10-05 02:40:01,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-05 04:57:51] 2024-10-05 02:40:01,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-05 04:57:51] 2024-10-05 02:40:01,113 | INFO     | aborting loop
[2024-10-05 04:57:51] 2024-10-05 02:40:01,114 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-05 04:57:51] 2024-10-05 02:40:01,115 | INFO     | found 0 job(s) in 20 queues
[2024-10-05 04:57:51] 2024-10-05 02:40:01,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-05 04:57:51] 2024-10-05 02:40:01,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-05 04:57:51] 2024-10-05 02:40:01,340 | INFO     | all payload control threads have been joined
[2024-10-05 04:57:51] 2024-10-05 02:40:01,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-05 04:57:51] 2024-10-05 02:40:01,973 | INFO     | all data control threads have been joined
[2024-10-05 04:57:51] 2024-10-05 02:40:02,118 | INFO     | [job] retrieve thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:02,119 | INFO     | [job] job monitor thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:02,138 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:02,170 | INFO     | all job control threads have been joined
[2024-10-05 04:57:51] 2024-10-05 02:40:02,303 | INFO     | [data] copytool_in thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:02,309 | INFO     | [payload] failed_post thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:02,347 | INFO     | [payload] control thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:02,451 | INFO     | [job] queue monitor thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:02,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-05 04:57:51] 2024-10-05 02:40:02,823 | INFO     | [payload] execute_payloads thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:02,980 | INFO     | [data] control thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:03,037 | INFO     | [payload] validate_pre thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:03,177 | INFO     | [job] control thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:03,283 | INFO     | [payload] validate_post thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:03,403 | INFO     | [job] create_data_payload thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:03,466 | INFO     | [job] validate thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:04,335 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-05 04:57:51] 2024-10-05 02:40:04,621 | INFO     | [data] copytool_out thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:08,344 | INFO     | [data] queue_monitor thread has finished
[2024-10-05 04:57:51] 2024-10-05 02:40:09,315 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340037994304)>', '<ExcThread(monitor, started 140339314677504)>']
[2024-10-05 04:57:51] 2024-10-05 02:40:10,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-05 04:57:51] 2024-10-05 02:40:10,169 | INFO     | [monitor] control thread has ended
[2024-10-05 04:57:51] 2024-10-05 02:40:14,340 | INFO     | all workflow threads have been joined
[2024-10-05 04:57:51] 2024-10-05 02:40:14,341 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-05 04:57:51] 2024-10-05 02:40:14,341 | INFO     | traces error code: 0
[2024-10-05 04:57:51] 2024-10-05 02:40:14,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-05 04:57:51] 2024-10-05 02:40:14,565 [wrapper] ==== pilot stdout END ====
[2024-10-05 04:57:51] 2024-10-05 02:40:14,622 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-05 04:57:51] 2024-10-05 02:40:14,652 [wrapper] pilotpid: 4381
[2024-10-05 04:57:51] 2024-10-05 02:40:14,719 [wrapper] Pilot exit status: 0
[2024-10-05 04:57:51] 2024-10-05 02:40:15,232 [wrapper] pandaids: 6354563384
[2024-10-05 04:57:51] 2024-10-05 02:40:16,035 [wrapper] cleanup supervisor_pilot 19235 4382
[2024-10-05 04:57:51] 2024-10-05 02:40:16,123 [wrapper] Test setup, not cleaning
[2024-10-05 04:57:51] 2024-10-05 02:40:16,246 [wrapper] ==== wrapper stdout END ====
[2024-10-05 04:57:51] 2024-10-05 02:40:16,364 [wrapper] ==== wrapper stderr END ====
[2024-10-05 04:57:51] 2024-10-05 02:40:16,532 [wrapper] apfmon messages muted
[2024-10-05 04:57:51]  *** Error codes and diagnostics ***
[2024-10-05 04:57:51]     "exeErrorCode": 0,
[2024-10-05 04:57:51]     "exeErrorDiag": "",
[2024-10-05 04:57:51]     "pilotErrorCode": 0,
[2024-10-05 04:57:51]     "pilotErrorDiag": "",
[2024-10-05 04:57:51]  *** Listing of results directory ***
[2024-10-05 04:57:51] total 575968
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc      5653 Oct  2 22:54 queuedata.json
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc    484599 Oct  2 22:55 pilot3.tar.gz
[2024-10-05 04:57:51] -rwx------. 1 boinc boinc     33814 Oct  2 22:58 runpilot2-wrapper.sh
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc       100 Oct  4 22:15 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-05 04:57:51] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 22:15 run_atlas
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc       105 Oct  4 22:15 job.xml
[2024-10-05 04:57:51] -rw-r--r--. 2 boinc boinc 310846100 Oct  4 22:15 EVNT.41491262._000009.pool.root.1
[2024-10-05 04:57:51] -rw-r--r--. 2 boinc boinc     17537 Oct  4 22:15 start_atlas.sh
[2024-10-05 04:57:51] drwxrwx--x. 2 boinc boinc        68 Oct  4 22:15 shared
[2024-10-05 04:57:51] -rw-r--r--. 2 boinc boinc    498190 Oct  4 22:15 input.tar.gz
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc      6347 Oct  4 22:15 init_data.xml
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc         0 Oct  4 22:15 boinc_lockfile
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc      2631 Oct  4 22:15 pandaJob.out
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc       424 Oct  4 22:15 setup.sh.local
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc   1024506 Oct  4 22:16 agis_schedconf.cvmfs.json
[2024-10-05 04:57:51] drwx------. 4 boinc boinc      4096 Oct  4 22:16 pilot3
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc 270020593 Oct  5 04:36 HITS.41491264._001041.pool.root.1
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc       531 Oct  5 04:37 boinc_task_state.xml
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc      1018 Oct  5 04:38 memory_monitor_summary.json
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc   1615815 Oct  5 04:38 agis_ddmendpoints.agis.ALL.json
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc    468557 Oct  5 04:38 log.41491264._001041.job.log.tgz.1
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc      7697 Oct  5 04:39 heartbeat.json
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc        95 Oct  5 04:40 pilot_heartbeat.json
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc      4397 Oct  5 04:40 pilotlog.txt
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc   2065124 Oct  5 04:40 log.41491264._001041.job.log.1
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc       357 Oct  5 04:40 output.list
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc       620 Oct  5 04:40 runtime_log
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc   2549760 Oct  5 04:40 result.tar.gz
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc       646 Oct  5 04:40 SINMDmabLG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmjhoKDmuhMA3n.diag
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc     10999 Oct  5 04:40 runtime_log.err
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc      8192 Oct  5 04:57 boinc_mmap_file
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc        28 Oct  5 04:57 wrapper_checkpoint.txt
[2024-10-05 04:57:51] -rw-r--r--. 1 boinc boinc     21547 Oct  5 04:57 stderr.txt
[2024-10-05 04:57:51] HITS file was successfully produced:
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc 270020593 Oct  5 04:36 shared/HITS.pool.root.1
[2024-10-05 04:57:51]  *** Contents of shared directory: ***
[2024-10-05 04:57:51] total 570256
[2024-10-05 04:57:51] -rw-r--r--. 2 boinc boinc 310846100 Oct  4 22:15 ATLAS.root_0
[2024-10-05 04:57:51] -rw-r--r--. 2 boinc boinc     17537 Oct  4 22:15 start_atlas.sh
[2024-10-05 04:57:51] -rw-r--r--. 2 boinc boinc    498190 Oct  4 22:15 input.tar.gz
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc 270020593 Oct  5 04:36 HITS.pool.root.1
[2024-10-05 04:57:51] -rw-------. 1 boinc boinc   2549760 Oct  5 04:40 result.tar.gz
04:57:53 (32636): run_atlas exited; CPU time 86069.114116
04:57:53 (32636): called boinc_finish(0)

</stderr_txt>
]]>

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