Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
06:08:47 (478269): wrapper (7.7.26015): starting
06:08:47 (478269): wrapper: running run_atlas (--nthreads 12)
[2024-10-04 06:08:47] Arguments: --nthreads 12
[2024-10-04 06:08:47] Threads: 12
[2024-10-04 06:08:47] Checking for CVMFS
[2024-10-04 06:08:49] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-04 06:08:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-04 06:08:51] Running cvmfs_config stat atlas.cern.ch
[2024-10-04 06:08:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-04 06:08:51] 2.11.5.0 478416 0 31232 137968 3 1 5509739 6144001 0 130560 0 0 0.000 1237 539 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-10-04 06:08:51] CVMFS is ok
[2024-10-04 06:08:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-04 06:08:51] Small home clusters do not require a local http proxy but it is suggested if
[2024-10-04 06:08:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-10-04 06:08:51] Further information can be found at the LHC@home message board.
[2024-10-04 06:08:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-04 06:08:51] Checking for apptainer binary...
[2024-10-04 06:08:51] apptainer is not installed, using version from CVMFS
[2024-10-04 06:08:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-04 06:08:51] ace
[2024-10-04 06:08:51] apptainer works
[2024-10-04 06:08:51] Set ATHENA_PROC_NUMBER=12
[2024-10-04 06:08:51] Set ATHENA_CORE_NUMBER=12
[2024-10-04 06:08:51] Starting ATLAS job with PandaID=6354541735
[2024-10-04 06:08:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-04 07:09:31]  *** The last 200 lines of the pilot log: ***
[2024-10-04 07:09:31]  lfn=log.41079470._000074.job.log.tgz.1
[2024-10-04 07:09:31]  mtime=0
[2024-10-04 07:09:31]  protocol_id=None
[2024-10-04 07:09:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-10-04 07:09:31]  replicas=None
[2024-10-04 07:09:31]  scope=mc23_13p6TeV
[2024-10-04 07:09:31]  status=None
[2024-10-04 07:09:31]  status_code=0
[2024-10-04 07:09:31]  storage_token=
[2024-10-04 07:09:31]  surl=/home/boinc-client/slots/2/PanDA_Pilot-6354541735/log.41079470._000074.job.log.tgz.1
[2024-10-04 07:09:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/9e/log.41079470._000074.job.log.tgz.1
[2024-10-04 07:09:31]  workdir=None
[2024-10-04 07:09:31] ]
[2024-10-04 07:09:31] 2024-10-04 12:09:06,721 | INFO     | transferring file log.41079470._000074.job.log.tgz.1 from /home/boinc-client/slots/2/PanDA_Pilot-6354541735/log.41079470._000074.job.log.tgz.1 to /home/boinc-clien
[2024-10-04 07:09:31] 2024-10-04 12:09:06,721 | INFO     | executing command: /usr/bin/env mv /home/boinc-client/slots/2/PanDA_Pilot-6354541735/log.41079470._000074.job.log.tgz.1 /home/boinc-client/slots/2/log.41079470._00
[2024-10-04 07:09:31] 2024-10-04 12:09:06,736 | INFO     | adding to output.list: log.41079470._000074.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/9e/log.41079470._000074.job.log.tg
[2024-10-04 07:09:31] 2024-10-04 12:09:06,737 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-04 07:09:31] 2024-10-04 12:09:06,737 | INFO     | summary of transferred files:
[2024-10-04 07:09:31] 2024-10-04 12:09:06,737 | INFO     |  -- lfn=log.41079470._000074.job.log.tgz.1, status_code=0, status=transferred
[2024-10-04 07:09:31] 2024-10-04 12:09:06,737 | INFO     | stage-out finished correctly
[2024-10-04 07:09:31] 2024-10-04 12:09:07,155 | WARNING  | process 489144 is no longer using CPU - aborting
[2024-10-04 07:09:31] 2024-10-04 12:09:09,034 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-04 07:09:31] 2024-10-04 12:09:09,658 | INFO     | monitor loop #282: job 0:6354541735 is in state 'finished'
[2024-10-04 07:09:31] 2024-10-04 12:09:09,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-04 07:09:31] 2024-10-04 12:09:11,754 | INFO     | job 6354541735 has state=finished
[2024-10-04 07:09:31] 2024-10-04 12:09:11,754 | INFO     | preparing for final server update for job 6354541735 in state='finished'
[2024-10-04 07:09:31] 2024-10-04 12:09:11,755 | INFO     | this job has now completed (state=finished)
[2024-10-04 07:09:31] 2024-10-04 12:09:11,755 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-04 07:09:31] 2024-10-04 12:09:11,755 | INFO     | log transfer has been attempted: DONE
[2024-10-04 07:09:31] 2024-10-04 12:09:11,755 | INFO     | job 6354541735 has finished - writing final server update
[2024-10-04 07:09:31] 2024-10-04 12:09:11,755 | INFO     | total number of processed events: 400 (read)
[2024-10-04 07:09:31] 2024-10-04 12:09:11,758 | INFO     | executing command: lscpu
[2024-10-04 07:09:31] 2024-10-04 12:09:11,777 | INFO     | found 8 cores (8 cores per socket, 1 sockets)
[2024-10-04 07:09:31] 2024-10-04 12:09:11,777 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-10-04 07:09:31] 2024-10-04 12:09:11,801 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-04 07:09:31] 2024-10-04 12:09:12,159 | INFO     | monitor loop #283: job 0:6354541735 is in state 'finished'
[2024-10-04 07:09:31] 2024-10-04 12:09:12,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-04 07:09:31] 2024-10-04 12:09:14,662 | INFO     | monitor loop #284: job 0:6354541735 is in state 'finished'
[2024-10-04 07:09:31] 2024-10-04 12:09:14,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-04 07:09:31] 2024-10-04 12:09:17,166 | INFO     | monitor loop #285: job 0:6354541735 is in state 'finished'
[2024-10-04 07:09:31] 2024-10-04 12:09:17,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-04 07:09:31] 2024-10-04 12:09:18,335 | INFO     | 3612s have passed since pilot start
[2024-10-04 07:09:31] 2024-10-04 12:09:18,722 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-04 07:09:31] 2024-10-04 12:09:18,723 | INFO     | using path: /home/boinc-client/slots/2/PanDA_Pilot-6354541735/memory_monitor_summary.json (trf name=prmon)
[2024-10-04 07:09:31] 2024-10-04 12:09:18,723 | INFO     | extracted standard info from prmon json
[2024-10-04 07:09:31] 2024-10-04 12:09:18,723 | INFO     | extracted standard memory fields from prmon json
[2024-10-04 07:09:31] 2024-10-04 12:09:18,724 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-04 07:09:31] 2024-10-04 12:09:18,724 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-04 07:09:31] 2024-10-04 12:09:18,724 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-04 07:09:31] 2024-10-04 12:09:18,725 | INFO     | fitting pss+swap vs Time
[2024-10-04 07:09:31] 2024-10-04 12:09:18,725 | INFO     | model: linear, x: [1728040475.0, 1728040536.0, 1728040597.0, 1728040658.0, 1728040719.0, 1728040780.0, 1728040841.0, 1728040902.0, 1728040963.0, 1728041024.0, 1728
[2024-10-04 07:09:31] 2024-10-04 12:09:18,725 | INFO     | sum of square deviations: 43584073.0
[2024-10-04 07:09:31] 2024-10-04 12:09:18,725 | INFO     | sum of deviations: 18011121873.000004
[2024-10-04 07:09:31] 2024-10-04 12:09:18,725 | INFO     | mean x: 1728042030.5
[2024-10-04 07:09:31] 2024-10-04 12:09:18,725 | INFO     | mean y: 2629989.269230769
[2024-10-04 07:09:31] 2024-10-04 12:09:18,725 | INFO     | -- intersect: -714110886042.1923
[2024-10-04 07:09:31] 2024-10-04 12:09:18,725 | INFO     | intersect: -714110886042.1923
[2024-10-04 07:09:31] 2024-10-04 12:09:18,725 | INFO     | chi2: 1.9447619818999056
[2024-10-04 07:09:31] 2024-10-04 12:09:18,725 | INFO     | -- intersect: -714110886042.1923
[2024-10-04 07:09:31] 2024-10-04 12:09:18,726 | INFO     | current memory leak: 413.25 B/s (using 52 data points, chi2=1.94)
[2024-10-04 07:09:31] 2024-10-04 12:09:18,726 | INFO     | ..............................
[2024-10-04 07:09:31] 2024-10-04 12:09:18,726 | INFO     | . Timing measurements:
[2024-10-04 07:09:31] 2024-10-04 12:09:18,726 | INFO     | . get job = 0 s
[2024-10-04 07:09:31] 2024-10-04 12:09:18,726 | INFO     | . initial setup = 3 s
[2024-10-04 07:09:31] 2024-10-04 12:09:18,726 | INFO     | . payload setup = 3 s
[2024-10-04 07:09:31] 2024-10-04 12:09:18,726 | INFO     | . stage-in = 0 s
[2024-10-04 07:09:31] 2024-10-04 12:09:18,726 | INFO     | . payload execution = 3575 s
[2024-10-04 07:09:31] 2024-10-04 12:09:18,726 | INFO     | . stage-out = 0 s
[2024-10-04 07:09:31] 2024-10-04 12:09:18,726 | INFO     | . log creation = 0 s
[2024-10-04 07:09:31] 2024-10-04 12:09:18,726 | INFO     | ..............................
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | 
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | job summary report
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | --------------------------------------------------
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | PanDA job id: 6354541735
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | task id: 41079470
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | errors: (none)
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | pilot state: finished 
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | transexitcode: 0
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | exeerrorcode: 0
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | exeerrordiag: 
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | exitcode: 0
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | exitmsg: OK
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | cpuconsumptiontime: 32104 s
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | nevents: 400
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | neventsw: 0
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | pid: 489144
[2024-10-04 07:09:31] 2024-10-04 12:09:18,772 | INFO     | pgrp: 489144
[2024-10-04 07:09:31] 2024-10-04 12:09:18,773 | INFO     | corecount: 12
[2024-10-04 07:09:31] 2024-10-04 12:09:18,773 | INFO     | event service: False
[2024-10-04 07:09:31] 2024-10-04 12:09:18,773 | INFO     | sizes: {0: 2435486, 3: 2435692, 11: 2435720, 3583: 2461379, 3584: 2470411, 3586: 2470467, 3596: 2470765}
[2024-10-04 07:09:31] 2024-10-04 12:09:18,773 | INFO     | --------------------------------------------------
[2024-10-04 07:09:31] 2024-10-04 12:09:18,773 | INFO     | 
[2024-10-04 07:09:31] 2024-10-04 12:09:18,773 | INFO     | executing command: ls -lF /home/boinc-client/slots/2
[2024-10-04 07:09:31] 2024-10-04 12:09:18,790 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,790 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,790 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,790 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,790 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | job 6354541735 has completed (purged errors)
[2024-10-04 07:09:31] 2024-10-04 12:09:18,791 | INFO     | overall cleanup function is called
[2024-10-04 07:09:31] 2024-10-04 12:09:19,799 | INFO     | --- collectZombieJob: --- 10, [489144]
[2024-10-04 07:09:31] 2024-10-04 12:09:19,799 | INFO     | zombie collector waiting for pid 489144
[2024-10-04 07:09:31] 2024-10-04 12:09:19,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-04 07:09:31] 2024-10-04 12:09:19,799 | INFO     | collected zombie processes
[2024-10-04 07:09:31] 2024-10-04 12:09:19,799 | INFO     | will  attempt to kill all subprocesses of pid=489144
[2024-10-04 07:09:31] 2024-10-04 12:09:19,880 | INFO     | process IDs to be killed: [489144] (in reverse order)
[2024-10-04 07:09:31] 2024-10-04 12:09:19,920 | WARNING  | found no corresponding commands to process id(s)
[2024-10-04 07:09:31] 2024-10-04 12:09:19,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-04 07:09:31] 2024-10-04 12:09:19,923 | INFO     | did not find any defunct processes belonging to 489144
[2024-10-04 07:09:31] 2024-10-04 12:09:19,925 | INFO     | did not find any defunct processes belonging to 489144
[2024-10-04 07:09:31] 2024-10-04 12:09:19,926 | INFO     | ready for new job
[2024-10-04 07:09:31] 2024-10-04 12:09:19,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-04 07:09:31] 2024-10-04 12:09:19,927 | INFO     | *************************************
[2024-10-04 07:09:31] 2024-10-04 12:09:19,927 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-04 07:09:31] 2024-10-04 12:09:19,927 | INFO     | *************************************
[2024-10-04 07:09:31] 2024-10-04 12:09:19,927 | INFO     | 
[2024-10-04 07:09:31] 2024-10-04 12:09:19,927 | INFO     | architecture information:
[2024-10-04 07:09:31] 2024-10-04 12:09:19,928 | INFO     | executing command: cat /etc/os-release
[2024-10-04 07:09:31] 2024-10-04 12:09:19,947 | INFO     | cat /etc/os-release:
[2024-10-04 07:09:31] NAME="CentOS Linux"
[2024-10-04 07:09:31] VERSION="7 (Core)"
[2024-10-04 07:09:31] ID="centos"
[2024-10-04 07:09:31] ID_LIKE="rhel fedora"
[2024-10-04 07:09:31] VERSION_ID="7"
[2024-10-04 07:09:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-04 07:09:31] ANSI_COLOR="0;31"
[2024-10-04 07:09:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-04 07:09:31] HOME_URL="https://www.centos.org/"
[2024-10-04 07:09:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-04 07:09:31] 
[2024-10-04 07:09:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-04 07:09:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-04 07:09:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-04 07:09:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-04 07:09:31] 
[2024-10-04 07:09:31] 2024-10-04 12:09:19,947 | INFO     | *************************************
[2024-10-04 07:09:31] 2024-10-04 12:09:20,450 | INFO     | executing command: df -mP /home/boinc-client/slots/2
[2024-10-04 07:09:31] 2024-10-04 12:09:20,466 | INFO     | sufficient remaining disk space (122117160960 B)
[2024-10-04 07:09:31] 2024-10-04 12:09:20,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-04 07:09:31] 2024-10-04 12:09:20,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-04 07:09:31] 2024-10-04 12:09:20,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-04 07:09:31] 2024-10-04 12:09:20,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-04 07:09:31] 2024-10-04 12:09:20,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-04 07:09:31] 2024-10-04 12:09:20,636 | INFO     | all job control threads have been joined
[2024-10-04 07:09:31] 2024-10-04 12:09:20,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-04 07:09:31] 2024-10-04 12:09:20,671 | INFO     | aborting loop
[2024-10-04 07:09:31] 2024-10-04 12:09:21,012 | INFO     | all data control threads have been joined
[2024-10-04 07:09:31] 2024-10-04 12:09:21,341 | INFO     | all payload control threads have been joined
[2024-10-04 07:09:31] 2024-10-04 12:09:21,346 | INFO     | found 0 job(s) in 20 queues
[2024-10-04 07:09:31] 2024-10-04 12:09:21,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-04 07:09:31] 2024-10-04 12:09:21,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-04 07:09:31] 2024-10-04 12:09:21,472 | INFO     | [job] retrieve thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:21,472 | INFO     | [job] queue monitor thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:21,547 | INFO     | [payload] execute_payloads thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:21,641 | INFO     | [job] control thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:21,676 | INFO     | [job] job monitor thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:21,835 | INFO     | [job] validate thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:21,927 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:22,017 | INFO     | [data] control thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:22,074 | INFO     | [job] create_data_payload thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:22,108 | INFO     | [data] copytool_in thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:22,139 | INFO     | [payload] validate_pre thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:22,347 | INFO     | [payload] control thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:22,472 | INFO     | [data] copytool_out thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:22,595 | INFO     | [payload] validate_post thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:23,004 | INFO     | [payload] failed_post thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:24,473 | INFO     | [data] queue_monitor thread has finished
[2024-10-04 07:09:31] 2024-10-04 12:09:25,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143940466496)>', '<ExcThread(monitor, started 140143319058176)>']
[2024-10-04 07:09:31] 2024-10-04 12:09:26,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-04 07:09:31] 2024-10-04 12:09:26,367 | INFO     | [monitor] control thread has ended
[2024-10-04 07:09:31] 2024-10-04 12:09:30,892 | INFO     | all workflow threads have been joined
[2024-10-04 07:09:31] 2024-10-04 12:09:30,893 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-04 07:09:31] 2024-10-04 12:09:30,893 | INFO     | traces error code: 0
[2024-10-04 07:09:31] 2024-10-04 12:09:30,893 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-04 07:09:31] 2024-10-04 12:09:30,983 [wrapper] ==== pilot stdout END ====
[2024-10-04 07:09:31] 2024-10-04 12:09:30,984 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-04 07:09:31] 2024-10-04 12:09:30,986 [wrapper] pilotpid: 482571
[2024-10-04 07:09:31] 2024-10-04 12:09:30,988 [wrapper] Pilot exit status: 0
[2024-10-04 07:09:31] 2024-10-04 12:09:30,995 [wrapper] pandaids: 6354541735
[2024-10-04 07:09:31] 2024-10-04 12:09:31,016 [wrapper] cleanup supervisor_pilot  507965 482572
[2024-10-04 07:09:31] 2024-10-04 12:09:31,018 [wrapper] Test setup, not cleaning
[2024-10-04 07:09:31] 2024-10-04 12:09:31,019 [wrapper] ==== wrapper stdout END ====
[2024-10-04 07:09:31] 2024-10-04 12:09:31,021 [wrapper] ==== wrapper stderr END ====
[2024-10-04 07:09:31] 2024-10-04 12:09:31,025 [wrapper] apfmon messages muted
[2024-10-04 07:09:31]  *** Error codes and diagnostics ***
[2024-10-04 07:09:31]     "exeErrorCode": 0,
[2024-10-04 07:09:31]     "exeErrorDiag": "",
[2024-10-04 07:09:31]     "pilotErrorCode": 0,
[2024-10-04 07:09:31]     "pilotErrorDiag": "",
[2024-10-04 07:09:31]  *** Listing of results directory ***
[2024-10-04 07:09:31] total 587336
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc    484599 Oct  2 15:20 pilot3.tar.gz
[2024-10-04 07:09:31] -rwx------ 1 boinc boinc     33814 Oct  2 15:26 runpilot2-wrapper.sh
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc      5653 Oct  2 15:27 queuedata.json
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc       100 Oct  4 06:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-04 07:09:31] -rwxr-xr-x 1 boinc boinc      7986 Oct  4 06:08 run_atlas
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc       105 Oct  4 06:08 job.xml
[2024-10-04 07:09:31] -rw-r--r-- 2 boinc boinc     17537 Oct  4 06:08 start_atlas.sh
[2024-10-04 07:09:31] drwxrwx--x 2 boinc boinc      4096 Oct  4 06:08 shared
[2024-10-04 07:09:31] -rw-r--r-- 2 boinc boinc    498168 Oct  4 06:08 input.tar.gz
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc      8912 Oct  4 06:08 init_data.xml
[2024-10-04 07:09:31] -rw-r--r-- 2 boinc boinc 440347464 Oct  4 06:08 EVNT.41079467._000003.pool.root.1
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc         0 Oct  4 06:08 boinc_lockfile
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc      2569 Oct  4 06:08 pandaJob.out
[2024-10-04 07:09:31] -rw------- 1 boinc boinc       424 Oct  4 06:08 setup.sh.local
[2024-10-04 07:09:31] -rw------- 1 boinc boinc   1024504 Oct  4 06:09 agis_schedconf.cvmfs.json
[2024-10-04 07:09:31] -rw------- 1 boinc boinc   1615815 Oct  4 06:09 agis_ddmendpoints.agis.ALL.json
[2024-10-04 07:09:31] drwx------ 4 boinc boinc      4096 Oct  4 06:09 pilot3
[2024-10-04 07:09:31] -rw------- 1 boinc boinc 155754856 Oct  4 07:08 HITS.41079470._000074.pool.root.1
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc       530 Oct  4 07:08 boinc_task_state.xml
[2024-10-04 07:09:31] -rw------- 1 boinc boinc      1029 Oct  4 07:09 memory_monitor_summary.json
[2024-10-04 07:09:31] -rw------- 1 boinc boinc    366117 Oct  4 07:09 log.41079470._000074.job.log.tgz.1
[2024-10-04 07:09:31] -rw------- 1 boinc boinc        95 Oct  4 07:09 pilot_heartbeat.json
[2024-10-04 07:09:31] -rw------- 1 boinc boinc      7682 Oct  4 07:09 heartbeat.json
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc      8192 Oct  4 07:09 boinc_mmap_file
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc        27 Oct  4 07:09 wrapper_checkpoint.txt
[2024-10-04 07:09:31] -rw------- 1 boinc boinc      4216 Oct  4 07:09 pilotlog.txt
[2024-10-04 07:09:31] -rw------- 1 boinc boinc    359659 Oct  4 07:09 log.41079470._000074.job.log.1
[2024-10-04 07:09:31] -rw------- 1 boinc boinc       357 Oct  4 07:09 output.list
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc       620 Oct  4 07:09 runtime_log
[2024-10-04 07:09:31] -rw------- 1 boinc boinc    747520 Oct  4 07:09 result.tar.gz
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc     10998 Oct  4 07:09 runtime_log.err
[2024-10-04 07:09:31] -rw------- 1 boinc boinc       629 Oct  4 07:09 7VRNDmU6KG6n7OlckoGmwREmGgkVDo1bjSoqOlfODmsdsKDmELOv5m.diag
[2024-10-04 07:09:31] -rw-r--r-- 1 boinc boinc     21767 Oct  4 07:09 stderr.txt
[2024-10-04 07:09:31] HITS file was successfully produced:
[2024-10-04 07:09:31] -rw------- 1 boinc boinc 155754856 Oct  4 07:08 shared/HITS.pool.root.1
[2024-10-04 07:09:31]  *** Contents of shared directory: ***
[2024-10-04 07:09:31] total 583384
[2024-10-04 07:09:31] -rw-r--r-- 2 boinc boinc     17537 Oct  4 06:08 start_atlas.sh
[2024-10-04 07:09:31] -rw-r--r-- 2 boinc boinc    498168 Oct  4 06:08 input.tar.gz
[2024-10-04 07:09:31] -rw-r--r-- 2 boinc boinc 440347464 Oct  4 06:08 ATLAS.root_0
[2024-10-04 07:09:31] -rw------- 1 boinc boinc 155754856 Oct  4 07:08 HITS.pool.root.1
[2024-10-04 07:09:31] -rw------- 1 boinc boinc    747520 Oct  4 07:09 result.tar.gz
07:09:32 (478269): run_atlas exited; CPU time 32059.630867
07:09:32 (478269): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN