Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:15 (440810): wrapper (7.7.26015): starting
19:20:15 (440810): wrapper: running run_atlas (--nthreads 6)
[2024-10-03 19:20:15] Arguments: --nthreads 6
[2024-10-03 19:20:15] Threads: 6
[2024-10-03 19:20:15] Checking for CVMFS
[2024-10-03 19:20:15] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-03 19:20:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-03 19:20:15] Running cvmfs_config stat atlas.cern.ch
[2024-10-03 19:20:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-03 19:20:15] 2.11.5.0 59890 519 58948 137924 2 55 20811463 20971521 928 130560 0 852209 99.994 171349 1203 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-10-03 19:20:15] CVMFS is ok
[2024-10-03 19:20:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-03 19:20:15] Small home clusters do not require a local http proxy but it is suggested if
[2024-10-03 19:20:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-10-03 19:20:15] Further information can be found at the LHC@home message board.
[2024-10-03 19:20:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-03 19:20:15] Checking for apptainer binary...
[2024-10-03 19:20:15] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-03 19:20:15] Running /usr/bin/apptainer --version
[2024-10-03 19:20:16] apptainer version 1.3.4-1.el9
[2024-10-03 19:20:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-03 19:20:16] testio005
[2024-10-03 19:20:16] apptainer works
[2024-10-03 19:20:16] Set ATHENA_PROC_NUMBER=6
[2024-10-03 19:20:16] Set ATHENA_CORE_NUMBER=6
[2024-10-03 19:20:16] Starting ATLAS job with PandaID=6354541764
[2024-10-03 19:20:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 20:46:15]  *** The last 200 lines of the pilot log: ***
[2024-10-03 20:46:15]  mtime=0
[2024-10-03 20:46:15]  protocol_id=None
[2024-10-03 20:46:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-10-03 20:46:15]  replicas=None
[2024-10-03 20:46:15]  scope=mc23_13p6TeV
[2024-10-03 20:46:15]  status=None
[2024-10-03 20:46:15]  status_code=0
[2024-10-03 20:46:15]  storage_token=
[2024-10-03 20:46:15]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6354541764/log.41079470._000101.job.log.tgz.1
[2024-10-03 20:46:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/cd/log.41079470._000101.job.log.tgz.1
[2024-10-03 20:46:15]  workdir=None
[2024-10-03 20:46:15] ]
[2024-10-03 20:46:15] 2024-10-03 11:45:45,732 | INFO     | transferring file log.41079470._000101.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6354541764/log.41079470._000101.job.log.tgz.1 to /var/lib/boinc/slots/
[2024-10-03 20:46:15] 2024-10-03 11:45:45,733 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6354541764/log.41079470._000101.job.log.tgz.1 /var/lib/boinc/slots/1/log.41079470._000101.job
[2024-10-03 20:46:15] 2024-10-03 11:45:45,741 | WARNING  | process 451114 is no longer using CPU - aborting
[2024-10-03 20:46:15] 2024-10-03 11:45:45,758 | INFO     | adding to output.list: log.41079470._000101.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/cd/log.41079470._000101.job.log.tg
[2024-10-03 20:46:15] 2024-10-03 11:45:45,759 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-10-03 20:46:15] 2024-10-03 11:45:45,759 | INFO     | summary of transferred files:
[2024-10-03 20:46:15] 2024-10-03 11:45:45,759 | INFO     |  -- lfn=log.41079470._000101.job.log.tgz.1, status_code=0, status=transferred
[2024-10-03 20:46:15] 2024-10-03 11:45:45,759 | INFO     | stage-out finished correctly
[2024-10-03 20:46:15] 2024-10-03 11:45:46,088 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-10-03 20:46:15] 2024-10-03 11:45:46,175 | INFO     | job 6354541764 has state=finished
[2024-10-03 20:46:15] 2024-10-03 11:45:46,175 | INFO     | preparing for final server update for job 6354541764 in state='finished'
[2024-10-03 20:46:15] 2024-10-03 11:45:46,176 | INFO     | this job has now completed (state=finished)
[2024-10-03 20:46:15] 2024-10-03 11:45:46,176 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-10-03 20:46:15] 2024-10-03 11:45:46,176 | INFO     | log transfer has been attempted: DONE
[2024-10-03 20:46:15] 2024-10-03 11:45:46,176 | INFO     | job 6354541764 has finished - writing final server update
[2024-10-03 20:46:15] 2024-10-03 11:45:46,176 | INFO     | total number of processed events: 400 (read)
[2024-10-03 20:46:15] 2024-10-03 11:45:46,189 | INFO     | executing command: lscpu
[2024-10-03 20:46:15] 2024-10-03 11:45:46,228 | INFO     | found 8 cores (8 cores per socket, 1 sockets)
[2024-10-03 20:46:15] 2024-10-03 11:45:46,228 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-10-03 20:46:15] 2024-10-03 11:45:46,271 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-10-03 20:46:15] 2024-10-03 11:45:48,244 | INFO     | monitor loop #403: job 0:6354541764 is in state 'finished'
[2024-10-03 20:46:15] 2024-10-03 11:45:48,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-03 20:46:15] 2024-10-03 11:45:50,746 | INFO     | monitor loop #404: job 0:6354541764 is in state 'finished'
[2024-10-03 20:46:15] 2024-10-03 11:45:50,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-03 20:46:15] 2024-10-03 11:45:53,249 | INFO     | monitor loop #405: job 0:6354541764 is in state 'finished'
[2024-10-03 20:46:15] 2024-10-03 11:45:53,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-03 20:46:15] 2024-10-03 11:45:55,752 | INFO     | monitor loop #406: job 0:6354541764 is in state 'finished'
[2024-10-03 20:46:15] 2024-10-03 11:45:55,752 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-03 20:46:15] 2024-10-03 11:45:58,255 | INFO     | monitor loop #407: job 0:6354541764 is in state 'finished'
[2024-10-03 20:46:15] 2024-10-03 11:45:58,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-10-03 20:46:15] 2024-10-03 11:46:00,348 | INFO     | CPU arch script returned: x86-64-v3
[2024-10-03 20:46:15] 2024-10-03 11:46:00,348 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6354541764/memory_monitor_summary.json (trf name=prmon)
[2024-10-03 20:46:15] 2024-10-03 11:46:00,349 | INFO     | extracted standard info from prmon json
[2024-10-03 20:46:15] 2024-10-03 11:46:00,349 | INFO     | extracted standard memory fields from prmon json
[2024-10-03 20:46:15] 2024-10-03 11:46:00,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-10-03 20:46:15] 2024-10-03 11:46:00,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-03 20:46:15] 2024-10-03 11:46:00,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-03 20:46:15] 2024-10-03 11:46:00,352 | INFO     | fitting pss+swap vs Time
[2024-10-03 20:46:15] 2024-10-03 11:46:00,352 | INFO     | model: linear, x: [1727951158.0, 1727951219.0, 1727951280.0, 1727951341.0, 1727951402.0, 1727951463.0, 1727951524.0, 1727951585.0, 1727951646.0, 1727951707.0, 1727
[2024-10-03 20:46:15] 2024-10-03 11:46:00,352 | INFO     | sum of square deviations: 141539398.0
[2024-10-03 20:46:15] 2024-10-03 11:46:00,352 | INFO     | sum of deviations: 26153591461.0
[2024-10-03 20:46:15] 2024-10-03 11:46:00,352 | INFO     | mean x: 1727953476.0
[2024-10-03 20:46:15] 2024-10-03 11:46:00,352 | INFO     | mean y: 2469486.272727273
[2024-10-03 20:46:15] 2024-10-03 11:46:00,353 | INFO     | -- intersect: -319288059606.68604
[2024-10-03 20:46:15] 2024-10-03 11:46:00,353 | INFO     | intersect: -319288059606.68604
[2024-10-03 20:46:15] 2024-10-03 11:46:00,353 | INFO     | chi2: 2.4862802500649277
[2024-10-03 20:46:15] 2024-10-03 11:46:00,353 | INFO     | -- intersect: -319288059606.68604
[2024-10-03 20:46:15] 2024-10-03 11:46:00,353 | INFO     | current memory leak: 184.78 B/s (using 77 data points, chi2=2.49)
[2024-10-03 20:46:15] 2024-10-03 11:46:00,353 | INFO     | ..............................
[2024-10-03 20:46:15] 2024-10-03 11:46:00,354 | INFO     | . Timing measurements:
[2024-10-03 20:46:15] 2024-10-03 11:46:00,354 | INFO     | . get job = 0 s
[2024-10-03 20:46:15] 2024-10-03 11:46:00,354 | INFO     | . initial setup = 5 s
[2024-10-03 20:46:15] 2024-10-03 11:46:00,354 | INFO     | . payload setup = 5 s
[2024-10-03 20:46:15] 2024-10-03 11:46:00,354 | INFO     | . stage-in = 0 s
[2024-10-03 20:46:15] 2024-10-03 11:46:00,354 | INFO     | . payload execution = 5093 s
[2024-10-03 20:46:15] 2024-10-03 11:46:00,354 | INFO     | . stage-out = 0 s
[2024-10-03 20:46:15] 2024-10-03 11:46:00,354 | INFO     | . log creation = 0 s
[2024-10-03 20:46:15] 2024-10-03 11:46:00,354 | INFO     | ..............................
[2024-10-03 20:46:15] 2024-10-03 11:46:00,570 | INFO     | 
[2024-10-03 20:46:15] 2024-10-03 11:46:00,570 | INFO     | job summary report
[2024-10-03 20:46:15] 2024-10-03 11:46:00,570 | INFO     | --------------------------------------------------
[2024-10-03 20:46:15] 2024-10-03 11:46:00,570 | INFO     | PanDA job id: 6354541764
[2024-10-03 20:46:15] 2024-10-03 11:46:00,570 | INFO     | task id: 41079470
[2024-10-03 20:46:15] 2024-10-03 11:46:00,570 | INFO     | errors: (none)
[2024-10-03 20:46:15] 2024-10-03 11:46:00,570 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | pilot state: finished 
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | transexitcode: 0
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | exeerrorcode: 0
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | exeerrordiag: 
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | exitcode: 0
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | exitmsg: OK
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | cpuconsumptiontime: 23755 s
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | nevents: 400
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | neventsw: 0
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | pid: 451114
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | pgrp: 451114
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | corecount: 6
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | event service: False
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | sizes: {0: 2435480, 4: 2435686, 11: 2435714, 5102: 2462059, 5103: 2471139, 5117: 2471253}
[2024-10-03 20:46:15] 2024-10-03 11:46:00,571 | INFO     | --------------------------------------------------
[2024-10-03 20:46:15] 2024-10-03 11:46:00,572 | INFO     | 
[2024-10-03 20:46:15] 2024-10-03 11:46:00,572 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2024-10-03 20:46:15] 2024-10-03 11:46:00,592 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,593 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,593 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,593 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 20:46:15] 2024-10-03 11:46:00,594 | INFO     | job 6354541764 has completed (purged errors)
[2024-10-03 20:46:15] 2024-10-03 11:46:00,595 | INFO     | overall cleanup function is called
[2024-10-03 20:46:15] 2024-10-03 11:46:01,601 | INFO     | --- collectZombieJob: --- 10, [451114]
[2024-10-03 20:46:15] 2024-10-03 11:46:01,601 | INFO     | zombie collector waiting for pid 451114
[2024-10-03 20:46:15] 2024-10-03 11:46:01,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 20:46:15] 2024-10-03 11:46:01,601 | INFO     | collected zombie processes
[2024-10-03 20:46:15] 2024-10-03 11:46:01,601 | INFO     | will  attempt to kill all subprocesses of pid=451114
[2024-10-03 20:46:15] 2024-10-03 11:46:01,676 | INFO     | process IDs to be killed: [451114] (in reverse order)
[2024-10-03 20:46:15] 2024-10-03 11:46:01,728 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 20:46:15] 2024-10-03 11:46:01,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 20:46:15] 2024-10-03 11:46:01,732 | INFO     | did not find any defunct processes belonging to 451114
[2024-10-03 20:46:15] 2024-10-03 11:46:01,735 | INFO     | did not find any defunct processes belonging to 451114
[2024-10-03 20:46:15] 2024-10-03 11:46:01,735 | INFO     | ready for new job
[2024-10-03 20:46:15] 2024-10-03 11:46:01,735 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 20:46:15] 2024-10-03 11:46:01,736 | INFO     | *************************************
[2024-10-03 20:46:15] 2024-10-03 11:46:01,737 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 20:46:15] 2024-10-03 11:46:01,737 | INFO     | *************************************
[2024-10-03 20:46:15] 2024-10-03 11:46:01,737 | INFO     | 
[2024-10-03 20:46:15] 2024-10-03 11:46:01,750 | INFO     | architecture information:
[2024-10-03 20:46:15] 2024-10-03 11:46:01,750 | INFO     | executing command: cat /etc/os-release
[2024-10-03 20:46:15] 2024-10-03 11:46:01,764 | INFO     | cat /etc/os-release:
[2024-10-03 20:46:15] NAME="CentOS Linux"
[2024-10-03 20:46:15] VERSION="7 (Core)"
[2024-10-03 20:46:15] ID="centos"
[2024-10-03 20:46:15] ID_LIKE="rhel fedora"
[2024-10-03 20:46:15] VERSION_ID="7"
[2024-10-03 20:46:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 20:46:15] ANSI_COLOR="0;31"
[2024-10-03 20:46:15] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 20:46:15] HOME_URL="https://www.centos.org/"
[2024-10-03 20:46:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 20:46:15] 
[2024-10-03 20:46:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 20:46:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 20:46:15] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 20:46:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 20:46:15] 
[2024-10-03 20:46:15] 2024-10-03 11:46:01,765 | INFO     | *************************************
[2024-10-03 20:46:15] 2024-10-03 11:46:02,267 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2024-10-03 20:46:15] 2024-10-03 11:46:02,283 | INFO     | sufficient remaining disk space (90583334912 B)
[2024-10-03 20:46:15] 2024-10-03 11:46:02,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 20:46:15] 2024-10-03 11:46:02,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 20:46:15] 2024-10-03 11:46:02,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 20:46:15] 2024-10-03 11:46:02,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 20:46:15] 2024-10-03 11:46:02,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 20:46:15] 2024-10-03 11:46:02,284 | INFO     | aborting loop
[2024-10-03 20:46:15] 2024-10-03 11:46:02,432 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 20:46:15] 2024-10-03 11:46:02,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 20:46:15] 2024-10-03 11:46:02,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 20:46:15] 2024-10-03 11:46:02,463 | INFO     | all payload control threads have been joined
[2024-10-03 20:46:15] 2024-10-03 11:46:02,494 | INFO     | all data control threads have been joined
[2024-10-03 20:46:15] 2024-10-03 11:46:03,289 | INFO     | [job] retrieve thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:03,290 | INFO     | [job] queue monitor thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:03,290 | INFO     | [job] job monitor thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:03,369 | INFO     | [job] validate thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:03,369 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:03,469 | INFO     | [payload] control thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:03,499 | INFO     | [data] control thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:03,697 | INFO     | all job control threads have been joined
[2024-10-03 20:46:15] 2024-10-03 11:46:03,701 | INFO     | [payload] validate_post thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:03,718 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:04,022 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:04,157 | INFO     | [data] copytool_in thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:04,244 | INFO     | [payload] failed_post thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:04,276 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:04,289 | INFO     | [data] copytool_out thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:04,702 | INFO     | [job] control thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:05,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 20:46:15] 2024-10-03 11:46:09,693 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 20:46:15] 2024-10-03 11:46:10,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140093753952064)>', '<ExcThread(monitor, started 140092966430464)>']
[2024-10-03 20:46:15] 2024-10-03 11:46:11,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 20:46:15] 2024-10-03 11:46:11,477 | INFO     | [monitor] control thread has ended
[2024-10-03 20:46:15] 2024-10-03 11:46:15,709 | INFO     | all workflow threads have been joined
[2024-10-03 20:46:15] 2024-10-03 11:46:15,709 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 20:46:15] 2024-10-03 11:46:15,709 | INFO     | traces error code: 0
[2024-10-03 20:46:15] 2024-10-03 11:46:15,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 20:46:15] 2024-10-03 11:46:15,803 [wrapper] ==== pilot stdout END ====
[2024-10-03 20:46:15] 2024-10-03 11:46:15,806 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 20:46:15] 2024-10-03 11:46:15,809 [wrapper] pilotpid: 444538
[2024-10-03 20:46:15] 2024-10-03 11:46:15,811 [wrapper] Pilot exit status: 0
[2024-10-03 20:46:15] 2024-10-03 11:46:15,820 [wrapper] pandaids: 6354541764
[2024-10-03 20:46:15] 2024-10-03 11:46:15,847 [wrapper] cleanup supervisor_pilot  497766 444539
[2024-10-03 20:46:15] 2024-10-03 11:46:15,849 [wrapper] Test setup, not cleaning
[2024-10-03 20:46:15] 2024-10-03 11:46:15,852 [wrapper] ==== wrapper stdout END ====
[2024-10-03 20:46:15] 2024-10-03 11:46:15,854 [wrapper] ==== wrapper stderr END ====
[2024-10-03 20:46:15] 2024-10-03 11:46:15,859 [wrapper] apfmon messages muted
[2024-10-03 20:46:15]  *** Error codes and diagnostics ***
[2024-10-03 20:46:15]     "exeErrorCode": 0,
[2024-10-03 20:46:15]     "exeErrorDiag": "",
[2024-10-03 20:46:15]     "pilotErrorCode": 0,
[2024-10-03 20:46:15]     "pilotErrorDiag": "",
[2024-10-03 20:46:15]  *** Listing of results directory ***
[2024-10-03 20:46:15] total 586228
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc    484599 Oct  3 05:20 pilot3.tar.gz
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc      5653 Oct  3 05:22 queuedata.json
[2024-10-03 20:46:15] -rwx------. 1 boinc boinc     33814 Oct  3 05:23 runpilot2-wrapper.sh
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc       100 Oct  3 19:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 20:46:15] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 19:20 run_atlas
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc       105 Oct  3 19:20 job.xml
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc      9351 Oct  3 19:20 init_data.xml
[2024-10-03 20:46:15] -rw-r--r--. 2 boinc boinc 442765074 Oct  3 19:20 EVNT.41079467._000005.pool.root.1
[2024-10-03 20:46:15] -rw-r--r--. 2 boinc boinc     17537 Oct  3 19:20 start_atlas.sh
[2024-10-03 20:46:15] drwxrwx--x. 2 boinc boinc        68 Oct  3 19:20 shared
[2024-10-03 20:46:15] -rw-r--r--. 2 boinc boinc    498161 Oct  3 19:20 input.tar.gz
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc         0 Oct  3 19:20 boinc_lockfile
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc      2568 Oct  3 19:20 pandaJob.out
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc       424 Oct  3 19:20 setup.sh.local
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc   1024603 Oct  3 19:20 agis_schedconf.cvmfs.json
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc   1615815 Oct  3 19:20 agis_ddmendpoints.agis.ALL.json
[2024-10-03 20:46:15] drwx------. 4 boinc boinc      4096 Oct  3 19:20 pilot3
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc 152192315 Oct  3 20:45 HITS.41079470._000101.pool.root.1
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc        95 Oct  3 20:45 pilot_heartbeat.json
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc      1035 Oct  3 20:45 memory_monitor_summary.json
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc       530 Oct  3 20:45 boinc_task_state.xml
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc    256930 Oct  3 20:45 log.41079470._000101.job.log.tgz.1
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc      7658 Oct  3 20:46 heartbeat.json
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc      8192 Oct  3 20:46 boinc_mmap_file
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc        27 Oct  3 20:46 wrapper_checkpoint.txt
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc      4211 Oct  3 20:46 pilotlog.txt
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc    486809 Oct  3 20:46 log.41079470._000101.job.log.1
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc       357 Oct  3 20:46 output.list
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc       620 Oct  3 20:46 runtime_log
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc    757760 Oct  3 20:46 result.tar.gz
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc     10957 Oct  3 20:46 runtime_log.err
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc       631 Oct  3 20:46 muiNDmN3KG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmPYoKDmV5uaKm.diag
[2024-10-03 20:46:15] -rw-r--r--. 1 boinc boinc     21832 Oct  3 20:46 stderr.txt
[2024-10-03 20:46:15] HITS file was successfully produced:
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc 152192315 Oct  3 20:45 shared/HITS.pool.root.1
[2024-10-03 20:46:15]  *** Contents of shared directory: ***
[2024-10-03 20:46:15] total 582268
[2024-10-03 20:46:15] -rw-r--r--. 2 boinc boinc 442765074 Oct  3 19:20 ATLAS.root_0
[2024-10-03 20:46:15] -rw-r--r--. 2 boinc boinc     17537 Oct  3 19:20 start_atlas.sh
[2024-10-03 20:46:15] -rw-r--r--. 2 boinc boinc    498161 Oct  3 19:20 input.tar.gz
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc 152192315 Oct  3 20:45 HITS.pool.root.1
[2024-10-03 20:46:15] -rw-------. 1 boinc boinc    757760 Oct  3 20:46 result.tar.gz
20:46:17 (440810): run_atlas exited; CPU time 23710.760950
20:46:17 (440810): called boinc_finish(0)

</stderr_txt>
]]>

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