Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:04:54 (2759): wrapper (7.7.26015): starting
07:04:54 (2759): wrapper: running run_atlas (--nthreads 8)
[2024-10-04 07:04:54] Arguments: --nthreads 8
[2024-10-04 07:04:54] Threads: 8
[2024-10-04 07:04:54] Checking for CVMFS
[2024-10-04 07:04:55] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-04 07:04:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-04 07:04:55] Running cvmfs_config stat atlas.cern.ch
[2024-10-04 07:04:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-04 07:04:55] 2.11.2.0 22897 55277 72508 137957 2 200 20644109 25165825 3544 130560 0 38776941 99.948 19885428 10955 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-04 07:04:55] CVMFS is ok
[2024-10-04 07:04:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-04 07:04:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-04 07:04:55] Further information can be found at the LHC@home message board.
[2024-10-04 07:04:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-04 07:04:55] Checking for apptainer binary...
[2024-10-04 07:04:55] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-04 07:04:55] Running /usr/bin/apptainer --version
[2024-10-04 07:04:55] apptainer version 1.3.2-1.el7
[2024-10-04 07:04:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-04 07:04:57] cg-vwn459.simple-grid.lan
[2024-10-04 07:04:57] apptainer works
[2024-10-04 07:04:57] Set ATHENA_PROC_NUMBER=8
[2024-10-04 07:04:57] Set ATHENA_CORE_NUMBER=8
[2024-10-04 07:04:57] Starting ATLAS job with PandaID=6354376873
[2024-10-04 07:04:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-04 13:46:59]  *** The last 200 lines of the pilot log: ***
[2024-10-04 13:46:59] 2024-10-04 11:46:37,225 | INFO     | model: linear, x: [1728018363.0, 1728018424.0, 1728018485.0, 1728018546.0, 1728018607.0, 1728018668.0, 1728018729.0, 1728018790.0, 1728018851.0, 1728018912.0, 1728
[2024-10-04 13:46:59] 2024-10-04 11:46:37,226 | INFO     | sum of square deviations: 18252584090.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,230 | INFO     | sum of deviations: 221526398056.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,230 | INFO     | mean x: 1728030197.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,230 | INFO     | mean y: 2509152.6580976862
[2024-10-04 13:46:59] 2024-10-04 11:46:37,231 | INFO     | -- intersect: -20970099623.495205
[2024-10-04 13:46:59] 2024-10-04 11:46:37,231 | INFO     | intersect: -20970099623.495205
[2024-10-04 13:46:59] 2024-10-04 11:46:37,231 | INFO     | chi2: 4.4204948237362975
[2024-10-04 13:46:59] 2024-10-04 11:46:37,231 | INFO     | current chi2=4.4204948237362975 (change=14.676795546423874 %)
[2024-10-04 13:46:59] 2024-10-04 11:46:37,231 | INFO     | right removable region: 388
[2024-10-04 13:46:59] 2024-10-04 11:46:37,232 | INFO     | model: linear, x: [1728018668.0, 1728018729.0, 1728018790.0, 1728018851.0, 1728018912.0, 1728018973.0, 1728019034.0, 1728019095.0, 1728019156.0, 1728019217.0, 1728
[2024-10-04 13:46:59] 2024-10-04 11:46:37,232 | INFO     | sum of square deviations: 18252584090.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,236 | INFO     | sum of deviations: 96079017643.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,237 | INFO     | mean x: 1728030502.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,237 | INFO     | mean y: 2525778.3136246786
[2024-10-04 13:46:59] 2024-10-04 11:46:37,237 | INFO     | -- intersect: -9093582053.358341
[2024-10-04 13:46:59] 2024-10-04 11:46:37,237 | INFO     | intersect: -9093582053.358341
[2024-10-04 13:46:59] 2024-10-04 11:46:37,238 | INFO     | chi2: 2.659214433026101
[2024-10-04 13:46:59] 2024-10-04 11:46:37,238 | INFO     | current chi2=2.659214433026101 (change=48.672556851178044 %)
[2024-10-04 13:46:59] 2024-10-04 11:46:37,238 | INFO     | model: linear, x: [1728018973.0, 1728019034.0, 1728019095.0, 1728019156.0, 1728019217.0, 1728019278.0, 1728019339.0, 1728019400.0, 1728019461.0, 1728019522.0, 1728
[2024-10-04 13:46:59] 2024-10-04 11:46:37,239 | INFO     | sum of square deviations: 17557761760.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,243 | INFO     | sum of deviations: 21587047525.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,243 | INFO     | mean x: 1728030654.5
[2024-10-04 13:46:59] 2024-10-04 11:46:37,243 | INFO     | mean y: 2542127.59375
[2024-10-04 13:46:59] 2024-10-04 11:46:37,243 | INFO     | -- intersect: -2122049854.7585812
[2024-10-04 13:46:59] 2024-10-04 11:46:37,243 | INFO     | intersect: -2122049854.7585812
[2024-10-04 13:46:59] 2024-10-04 11:46:37,244 | INFO     | chi2: 1.4138869955186366
[2024-10-04 13:46:59] 2024-10-04 11:46:37,244 | INFO     | current chi2=1.4138869955186366 (change=46.83065126456619 %)
[2024-10-04 13:46:59] 2024-10-04 11:46:37,244 | INFO     | model: linear, x: [1728019278.0, 1728019339.0, 1728019400.0, 1728019461.0, 1728019522.0, 1728019583.0, 1728019644.0, 1728019705.0, 1728019766.0, 1728019827.0, 1728
[2024-10-04 13:46:59] 2024-10-04 11:46:37,245 | INFO     | sum of square deviations: 16880800230.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,249 | INFO     | sum of deviations: -21641588418.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,249 | INFO     | mean x: 1728030807.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,249 | INFO     | mean y: 2551826.4670184697
[2024-10-04 13:46:59] 2024-10-04 11:46:37,249 | INFO     | -- intersect: 2217928525.982548
[2024-10-04 13:46:59] 2024-10-04 11:46:37,249 | INFO     | intersect: 2217928525.982548
[2024-10-04 13:46:59] 2024-10-04 11:46:37,250 | INFO     | chi2: 0.840815987689515
[2024-10-04 13:46:59] 2024-10-04 11:46:37,250 | INFO     | current chi2=0.840815987689515 (change=40.53159903482314 %)
[2024-10-04 13:46:59] 2024-10-04 11:46:37,250 | INFO     | model: linear, x: [1728019583.0, 1728019644.0, 1728019705.0, 1728019766.0, 1728019827.0, 1728019888.0, 1728019949.0, 1728020010.0, 1728020071.0, 1728020132.0, 1728
[2024-10-04 13:46:59] 2024-10-04 11:46:37,251 | INFO     | sum of square deviations: 16221466937.5
[2024-10-04 13:46:59] 2024-10-04 11:46:37,255 | INFO     | sum of deviations: -30877030630.000004
[2024-10-04 13:46:59] 2024-10-04 11:46:37,255 | INFO     | mean x: 1728030959.5
[2024-10-04 13:46:59] 2024-10-04 11:46:37,255 | INFO     | mean y: 2553949.080213904
[2024-10-04 13:46:59] 2024-10-04 11:46:37,255 | INFO     | -- intersect: 3291804241.4026003
[2024-10-04 13:46:59] 2024-10-04 11:46:37,255 | INFO     | intersect: 3291804241.4026003
[2024-10-04 13:46:59] 2024-10-04 11:46:37,256 | INFO     | chi2: 0.8014791798912823
[2024-10-04 13:46:59] 2024-10-04 11:46:37,256 | INFO     | current chi2=0.8014791798912823 (change=4.678408638057266 %)
[2024-10-04 13:46:59] 2024-10-04 11:46:37,256 | INFO     | left removable region: 40
[2024-10-04 13:46:59] 2024-10-04 11:46:37,256 | INFO     | model: linear, x: [1728020803.0, 1728020864.0, 1728020925.0, 1728020986.0, 1728021047.0, 1728021108.0, 1728021169.0, 1728021230.0, 1728021291.0, 1728021352.0, 1728
[2024-10-04 13:46:59] 2024-10-04 11:46:37,257 | INFO     | sum of square deviations: 13068103627.0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,260 | INFO     | sum of deviations: -703324235.500005
[2024-10-04 13:46:59] 2024-10-04 11:46:37,260 | INFO     | mean x: 1728031386.5
[2024-10-04 13:46:59] 2024-10-04 11:46:37,260 | INFO     | mean y: 2558728.882183908
[2024-10-04 13:46:59] 2024-10-04 11:46:37,261 | INFO     | -- intersect: 95561232.42210524
[2024-10-04 13:46:59] 2024-10-04 11:46:37,261 | INFO     | intersect: 95561232.42210524
[2024-10-04 13:46:59] 2024-10-04 11:46:37,261 | INFO     | chi2: 0.014249822991976463
[2024-10-04 13:46:59] 2024-10-04 11:46:37,261 | INFO     | -- intersect: 95561232.42210524
[2024-10-04 13:46:59] 2024-10-04 11:46:37,261 | INFO     | current memory leak: -0.05 B/s (using 348 data points, chi2=0.01)
[2024-10-04 13:46:59] 2024-10-04 11:46:37,262 | INFO     | ..............................
[2024-10-04 13:46:59] 2024-10-04 11:46:37,263 | INFO     | . Timing measurements:
[2024-10-04 13:46:59] 2024-10-04 11:46:37,263 | INFO     | . get job = 0 s
[2024-10-04 13:46:59] 2024-10-04 11:46:37,263 | INFO     | . initial setup = 2 s
[2024-10-04 13:46:59] 2024-10-04 11:46:37,263 | INFO     | . payload setup = 10 s
[2024-10-04 13:46:59] 2024-10-04 11:46:37,263 | INFO     | . stage-in = 0 s
[2024-10-04 13:46:59] 2024-10-04 11:46:37,263 | INFO     | . payload execution = 24020 s
[2024-10-04 13:46:59] 2024-10-04 11:46:37,263 | INFO     | . stage-out = 2 s
[2024-10-04 13:46:59] 2024-10-04 11:46:37,263 | INFO     | . log creation = 0 s
[2024-10-04 13:46:59] 2024-10-04 11:46:37,263 | INFO     | ..............................
[2024-10-04 13:46:59] 2024-10-04 11:46:37,793 | INFO     | 
[2024-10-04 13:46:59] 2024-10-04 11:46:37,793 | INFO     | job summary report
[2024-10-04 13:46:59] 2024-10-04 11:46:37,793 | INFO     | --------------------------------------------------
[2024-10-04 13:46:59] 2024-10-04 11:46:37,793 | INFO     | PanDA job id: 6354376873
[2024-10-04 13:46:59] 2024-10-04 11:46:37,793 | INFO     | task id: 41491228
[2024-10-04 13:46:59] 2024-10-04 11:46:37,793 | INFO     | errors: (none)
[2024-10-04 13:46:59] 2024-10-04 11:46:37,793 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-04 13:46:59] 2024-10-04 11:46:37,793 | INFO     | pilot state: finished 
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | transexitcode: 0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | exeerrorcode: 0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | exeerrordiag: 
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | exitcode: 0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | exitmsg: OK
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | cpuconsumptiontime: 87290 s
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | nevents: 400
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | neventsw: 0
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | pid: 15860
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | pgrp: 15860
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | corecount: 8
[2024-10-04 13:46:59] 2024-10-04 11:46:37,794 | INFO     | event service: False
[2024-10-04 13:46:59] 2024-10-04 11:46:37,795 | INFO     | sizes: {0: 2435445, 1: 2435644, 9: 2435850, 12: 2435878, 24034: 2470658, 24035: 2470657, 24037: 2479865, 24039: 2479921, 24063: 2480091}
[2024-10-04 13:46:59] 2024-10-04 11:46:37,795 | INFO     | --------------------------------------------------
[2024-10-04 13:46:59] 2024-10-04 11:46:37,795 | INFO     | 
[2024-10-04 13:46:59] 2024-10-04 11:46:37,795 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-04 13:46:59] 2024-10-04 11:46:37,909 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,909 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,910 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,910 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,911 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-04 13:46:59] 2024-10-04 11:46:37,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,911 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-04 13:46:59] 2024-10-04 11:46:37,911 | INFO     | job 6354376873 has completed (purged errors)
[2024-10-04 13:46:59] 2024-10-04 11:46:37,912 | INFO     | overall cleanup function is called
[2024-10-04 13:46:59] 2024-10-04 11:46:38,920 | INFO     | --- collectZombieJob: --- 10, [15860]
[2024-10-04 13:46:59] 2024-10-04 11:46:38,920 | INFO     | zombie collector waiting for pid 15860
[2024-10-04 13:46:59] 2024-10-04 11:46:38,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-04 13:46:59] 2024-10-04 11:46:38,920 | INFO     | collected zombie processes
[2024-10-04 13:46:59] 2024-10-04 11:46:38,920 | INFO     | will  attempt to kill all subprocesses of pid=15860
[2024-10-04 13:46:59] 2024-10-04 11:46:39,038 | INFO     | process IDs to be killed: [15860] (in reverse order)
[2024-10-04 13:46:59] 2024-10-04 11:46:39,454 | WARNING  | found no corresponding commands to process id(s)
[2024-10-04 13:46:59] 2024-10-04 11:46:39,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-04 13:46:59] 2024-10-04 11:46:39,458 | INFO     | did not find any defunct processes belonging to 15860
[2024-10-04 13:46:59] 2024-10-04 11:46:39,461 | INFO     | did not find any defunct processes belonging to 15860
[2024-10-04 13:46:59] 2024-10-04 11:46:39,461 | INFO     | ready for new job
[2024-10-04 13:46:59] 2024-10-04 11:46:39,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-04 13:46:59] 2024-10-04 11:46:39,464 | INFO     | *************************************
[2024-10-04 13:46:59] 2024-10-04 11:46:39,464 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-04 13:46:59] 2024-10-04 11:46:39,464 | INFO     | *************************************
[2024-10-04 13:46:59] 2024-10-04 11:46:39,464 | INFO     | 
[2024-10-04 13:46:59] 2024-10-04 11:46:39,465 | INFO     | pilot is running in a VM
[2024-10-04 13:46:59] 2024-10-04 11:46:39,465 | INFO     | architecture information:
[2024-10-04 13:46:59] 2024-10-04 11:46:39,465 | INFO     | executing command: cat /etc/os-release
[2024-10-04 13:46:59] 2024-10-04 11:46:39,514 | INFO     | cat /etc/os-release:
[2024-10-04 13:46:59] NAME="CentOS Linux"
[2024-10-04 13:46:59] VERSION="7 (Core)"
[2024-10-04 13:46:59] ID="centos"
[2024-10-04 13:46:59] ID_LIKE="rhel fedora"
[2024-10-04 13:46:59] VERSION_ID="7"
[2024-10-04 13:46:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-04 13:46:59] ANSI_COLOR="0;31"
[2024-10-04 13:46:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-04 13:46:59] HOME_URL="https://www.centos.org/"
[2024-10-04 13:46:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-04 13:46:59] 
[2024-10-04 13:46:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-04 13:46:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-04 13:46:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-04 13:46:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-04 13:46:59] 
[2024-10-04 13:46:59] 2024-10-04 11:46:39,514 | INFO     | *************************************
[2024-10-04 13:46:59] 2024-10-04 11:46:40,021 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-04 13:46:59] 2024-10-04 11:46:40,063 | INFO     | sufficient remaining disk space (490479812608 B)
[2024-10-04 13:46:59] 2024-10-04 11:46:40,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-04 13:46:59] 2024-10-04 11:46:40,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-04 13:46:59] 2024-10-04 11:46:40,064 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-04 13:46:59] 2024-10-04 11:46:40,064 | INFO     | found 0 job(s) in 20 queues
[2024-10-04 13:46:59] 2024-10-04 11:46:40,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-04 13:46:59] 2024-10-04 11:46:40,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-04 13:46:59] 2024-10-04 11:46:40,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-04 13:46:59] 2024-10-04 11:46:40,521 | INFO     | all data control threads have been joined
[2024-10-04 13:46:59] 2024-10-04 11:46:40,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-04 13:46:59] 2024-10-04 11:46:40,788 | INFO     | aborting loop
[2024-10-04 13:46:59] 2024-10-04 11:46:41,070 | INFO     | [job] retrieve thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:41,119 | INFO     | [payload] failed_post thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:41,222 | INFO     | [job] validate thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:41,292 | INFO     | [data] copytool_in thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:41,518 | INFO     | all payload control threads have been joined
[2024-10-04 13:46:59] 2024-10-04 11:46:41,527 | INFO     | [data] control thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:41,659 | INFO     | [job] create_data_payload thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:41,743 | INFO     | all job control threads have been joined
[2024-10-04 13:46:59] 2024-10-04 11:46:41,794 | INFO     | [job] job monitor thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:41,804 | INFO     | [payload] validate_pre thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:41,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-04 13:46:59] 2024-10-04 11:46:41,869 | INFO     | [payload] execute_payloads thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:42,072 | INFO     | [data] copytool_out thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:42,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-04 13:46:59] 2024-10-04 11:46:42,524 | INFO     | [payload] control thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:42,622 | INFO     | [payload] validate_post thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:42,749 | INFO     | [job] control thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:43,409 | INFO     | [job] queue monitor thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:45,875 | INFO     | [data] queue_monitor thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:50,840 | INFO     | job.realtimelogging is not enabled
[2024-10-04 13:46:59] 2024-10-04 11:46:51,846 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-04 13:46:59] 2024-10-04 11:46:52,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140618325821248)>', '<ExcThread(monitor, started 140617757746944)>']
[2024-10-04 13:46:59] 2024-10-04 11:46:53,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-04 13:46:59] 2024-10-04 11:46:53,142 | INFO     | [monitor] control thread has ended
[2024-10-04 13:46:59] 2024-10-04 11:46:57,500 | INFO     | all workflow threads have been joined
[2024-10-04 13:46:59] 2024-10-04 11:46:57,500 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-04 13:46:59] 2024-10-04 11:46:57,500 | INFO     | traces error code: 0
[2024-10-04 13:46:59] 2024-10-04 11:46:57,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-04 13:46:59] 2024-10-04 11:46:57,731 [wrapper] ==== pilot stdout END ====
[2024-10-04 13:46:59] 2024-10-04 11:46:57,771 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-04 13:46:59] 2024-10-04 11:46:57,813 [wrapper] pilotpid: 7749
[2024-10-04 13:46:59] 2024-10-04 11:46:57,886 [wrapper] Pilot exit status: 0
[2024-10-04 13:46:59] 2024-10-04 11:46:58,122 [wrapper] pandaids: 6354376873
[2024-10-04 13:46:59] 2024-10-04 11:46:58,415 [wrapper] cleanup supervisor_pilot 13856 7750
[2024-10-04 13:46:59] 2024-10-04 11:46:58,450 [wrapper] Test setup, not cleaning
[2024-10-04 13:46:59] 2024-10-04 11:46:58,474 [wrapper] ==== wrapper stdout END ====
[2024-10-04 13:46:59] 2024-10-04 11:46:58,488 [wrapper] ==== wrapper stderr END ====
[2024-10-04 13:46:59] 2024-10-04 11:46:58,618 [wrapper] apfmon messages muted
[2024-10-04 13:46:59]  *** Error codes and diagnostics ***
[2024-10-04 13:46:59]     "exeErrorCode": 0,
[2024-10-04 13:46:59]     "exeErrorDiag": "",
[2024-10-04 13:46:59]     "pilotErrorCode": 0,
[2024-10-04 13:46:59]     "pilotErrorDiag": "",
[2024-10-04 13:46:59]  *** Listing of results directory ***
[2024-10-04 13:46:59] total 588448
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc    484599 Oct  2 17:04 pilot3.tar.gz
[2024-10-04 13:46:59] -rwx------. 1 boinc boinc     33814 Oct  2 17:34 runpilot2-wrapper.sh
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc      5653 Oct  2 17:34 queuedata.json
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc       100 Oct  4 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-04 13:46:59] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 07:04 run_atlas
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc       105 Oct  4 07:04 job.xml
[2024-10-04 13:46:59] -rw-r--r--. 2 boinc boinc 315951699 Oct  4 07:04 EVNT.41491226._000011.pool.root.1
[2024-10-04 13:46:59] drwxrwx--x. 2 boinc boinc        68 Oct  4 07:04 shared
[2024-10-04 13:46:59] -rw-r--r--. 2 boinc boinc    498185 Oct  4 07:04 input.tar.gz
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc      6347 Oct  4 07:04 init_data.xml
[2024-10-04 13:46:59] -rw-r--r--. 2 boinc boinc     17537 Oct  4 07:04 start_atlas.sh
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc         0 Oct  4 07:04 boinc_lockfile
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc      2676 Oct  4 07:04 pandaJob.out
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc       424 Oct  4 07:04 setup.sh.local
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc   1024526 Oct  4 07:05 agis_schedconf.cvmfs.json
[2024-10-04 13:46:59] drwx------. 4 boinc boinc      4096 Oct  4 07:05 pilot3
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc 277173261 Oct  4 13:45 HITS.41491228._000272.pool.root.1
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc       531 Oct  4 13:45 boinc_task_state.xml
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc        95 Oct  4 13:46 pilot_heartbeat.json
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc      1020 Oct  4 13:46 memory_monitor_summary.json
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc   1615815 Oct  4 13:46 agis_ddmendpoints.agis.ALL.json
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc    497165 Oct  4 13:46 log.41491228._000272.job.log.tgz.1
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc      7685 Oct  4 13:46 heartbeat.json
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc      8192 Oct  4 13:46 boinc_mmap_file
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc        28 Oct  4 13:46 wrapper_checkpoint.txt
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc      4469 Oct  4 13:46 pilotlog.txt
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc   2295768 Oct  4 13:46 log.41491228._000272.job.log.1
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc       357 Oct  4 13:46 output.list
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc       620 Oct  4 13:46 runtime_log
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc   2816000 Oct  4 13:46 result.tar.gz
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc     10999 Oct  4 13:46 runtime_log.err
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc       646 Oct  4 13:46 JFiMDmOYGG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDm4AoKDm4pOOKo.diag
[2024-10-04 13:46:59] -rw-r--r--. 1 boinc boinc     21548 Oct  4 13:46 stderr.txt
[2024-10-04 13:46:59] HITS file was successfully produced:
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc 277173261 Oct  4 13:45 shared/HITS.pool.root.1
[2024-10-04 13:46:59]  *** Contents of shared directory: ***
[2024-10-04 13:46:59] total 582488
[2024-10-04 13:46:59] -rw-r--r--. 2 boinc boinc 315951699 Oct  4 07:04 ATLAS.root_0
[2024-10-04 13:46:59] -rw-r--r--. 2 boinc boinc    498185 Oct  4 07:04 input.tar.gz
[2024-10-04 13:46:59] -rw-r--r--. 2 boinc boinc     17537 Oct  4 07:04 start_atlas.sh
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc 277173261 Oct  4 13:45 HITS.pool.root.1
[2024-10-04 13:46:59] -rw-------. 1 boinc boinc   2816000 Oct  4 13:46 result.tar.gz
13:47:01 (2759): run_atlas exited; CPU time 87196.890142
13:47:01 (2759): called boinc_finish(0)

</stderr_txt>
]]>

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