Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:14:58 (28585): wrapper (7.7.26015): starting
08:14:58 (28585): wrapper: running run_atlas (--nthreads 8)
[2024-10-04 08:14:58] Arguments: --nthreads 8
[2024-10-04 08:14:58] Threads: 8
[2024-10-04 08:14:58] Checking for CVMFS
[2024-10-04 08:14:59] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-04 08:15:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-04 08:15:00] Running cvmfs_config stat atlas.cern.ch
[2024-10-04 08:15:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-04 08:15:00] 2.11.2.0 3911 55363 71552 137959 2 157 13085688 25165825 4184 130560 0 36754241 99.936 19875110 8493 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-04 08:15:00] CVMFS is ok
[2024-10-04 08:15:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-04 08:15:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-04 08:15:00] Further information can be found at the LHC@home message board.
[2024-10-04 08:15:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-04 08:15:00] Checking for apptainer binary...
[2024-10-04 08:15:00] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-04 08:15:00] Running /usr/bin/apptainer --version
[2024-10-04 08:15:00] apptainer version 1.3.2-1.el7
[2024-10-04 08:15:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-04 08:15:02] cg-vwn267.simple-grid.lan
[2024-10-04 08:15:02] apptainer works
[2024-10-04 08:15:02] Set ATHENA_PROC_NUMBER=8
[2024-10-04 08:15:02] Set ATHENA_CORE_NUMBER=8
[2024-10-04 08:15:02] Starting ATLAS job with PandaID=6354376804
[2024-10-04 08:15:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-04 15:37:30]  *** The last 200 lines of the pilot log: ***
[2024-10-04 15:37:30] 2024-10-04 13:19:41,921 | INFO     | model: linear, x: [1728022566.0, 1728022627.0, 1728022688.0, 1728022749.0, 1728022810.0, 1728022871.0, 1728022932.0, 1728022993.0, 1728023054.0, 1728023115.0, 1728
[2024-10-04 15:37:30] 2024-10-04 13:19:41,922 | INFO     | sum of square deviations: 21371126282.5
[2024-10-04 15:37:30] 2024-10-04 13:19:41,927 | INFO     | sum of deviations: 232526993394.5
[2024-10-04 15:37:30] 2024-10-04 13:19:41,928 | INFO     | mean x: 1728035040.5
[2024-10-04 15:37:30] 2024-10-04 13:19:41,928 | INFO     | mean y: 2516137.3585365852
[2024-10-04 15:37:30] 2024-10-04 13:19:41,928 | INFO     | -- intersect: -18799244103.83375
[2024-10-04 15:37:30] 2024-10-04 13:19:41,928 | INFO     | intersect: -18799244103.83375
[2024-10-04 15:37:30] 2024-10-04 13:19:41,929 | INFO     | chi2: 5.141428370627357
[2024-10-04 15:37:30] 2024-10-04 13:19:41,929 | INFO     | current chi2=5.141428370627357 (change=12.819793283834823 %)
[2024-10-04 15:37:30] 2024-10-04 13:19:41,929 | INFO     | right removable region: 409
[2024-10-04 15:37:30] 2024-10-04 13:19:41,930 | INFO     | model: linear, x: [1728022871.0, 1728022932.0, 1728022993.0, 1728023054.0, 1728023115.0, 1728023176.0, 1728023237.0, 1728023298.0, 1728023359.0, 1728023420.0, 1728
[2024-10-04 15:37:30] 2024-10-04 13:19:41,930 | INFO     | sum of square deviations: 21371126282.5
[2024-10-04 15:37:30] 2024-10-04 13:19:41,935 | INFO     | sum of deviations: 91633547544.00002
[2024-10-04 15:37:30] 2024-10-04 13:19:41,936 | INFO     | mean x: 1728035345.5
[2024-10-04 15:37:30] 2024-10-04 13:19:41,936 | INFO     | mean y: 2533407.43902439
[2024-10-04 15:37:30] 2024-10-04 13:19:41,936 | INFO     | -- intersect: -7406809782.828409
[2024-10-04 15:37:30] 2024-10-04 13:19:41,936 | INFO     | intersect: -7406809782.828409
[2024-10-04 15:37:30] 2024-10-04 13:19:41,937 | INFO     | chi2: 3.020219105680567
[2024-10-04 15:37:30] 2024-10-04 13:19:41,937 | INFO     | current chi2=3.020219105680567 (change=48.787903481145825 %)
[2024-10-04 15:37:30] 2024-10-04 13:19:41,938 | INFO     | model: linear, x: [1728023176.0, 1728023237.0, 1728023298.0, 1728023359.0, 1728023420.0, 1728023481.0, 1728023542.0, 1728023603.0, 1728023664.0, 1728023725.0, 1728
[2024-10-04 15:37:30] 2024-10-04 13:19:41,938 | INFO     | sum of square deviations: 20598749010.0
[2024-10-04 15:37:30] 2024-10-04 13:19:41,943 | INFO     | sum of deviations: 1492248794.9999924
[2024-10-04 15:37:30] 2024-10-04 13:19:41,944 | INFO     | mean x: 1728035498.0
[2024-10-04 15:37:30] 2024-10-04 13:19:41,944 | INFO     | mean y: 2551205.2543209875
[2024-10-04 15:37:30] 2024-10-04 13:19:41,944 | INFO     | -- intersect: -122634012.95266137
[2024-10-04 15:37:30] 2024-10-04 13:19:41,944 | INFO     | intersect: -122634012.95266137
[2024-10-04 15:37:30] 2024-10-04 13:19:41,945 | INFO     | chi2: 1.3665248601804163
[2024-10-04 15:37:30] 2024-10-04 13:19:41,945 | INFO     | current chi2=1.3665248601804163 (change=54.754115103430955 %)
[2024-10-04 15:37:30] 2024-10-04 13:19:41,946 | INFO     | model: linear, x: [1728023481.0, 1728023542.0, 1728023603.0, 1728023664.0, 1728023725.0, 1728023786.0, 1728023847.0, 1728023908.0, 1728023969.0, 1728024030.0, 1728
[2024-10-04 15:37:30] 2024-10-04 13:19:41,946 | INFO     | sum of square deviations: 19845209300.0
[2024-10-04 15:37:30] 2024-10-04 13:19:41,951 | INFO     | sum of deviations: -39804108753.0
[2024-10-04 15:37:30] 2024-10-04 13:19:41,952 | INFO     | mean x: 1728035650.5
[2024-10-04 15:37:30] 2024-10-04 13:19:41,952 | INFO     | mean y: 2559529.18
[2024-10-04 15:37:30] 2024-10-04 13:19:41,952 | INFO     | -- intersect: 3468530480.746789
[2024-10-04 15:37:30] 2024-10-04 13:19:41,952 | INFO     | intersect: 3468530480.746789
[2024-10-04 15:37:30] 2024-10-04 13:19:41,953 | INFO     | chi2: 0.8808128772909916
[2024-10-04 15:37:30] 2024-10-04 13:19:41,953 | INFO     | current chi2=0.8808128772909916 (change=35.543589219833024 %)
[2024-10-04 15:37:30] 2024-10-04 13:19:41,954 | INFO     | model: linear, x: [1728023786.0, 1728023847.0, 1728023908.0, 1728023969.0, 1728024030.0, 1728024091.0, 1728024152.0, 1728024213.0, 1728024274.0, 1728024335.0, 1728
[2024-10-04 15:37:30] 2024-10-04 13:19:41,954 | INFO     | sum of square deviations: 19110274590.0
[2024-10-04 15:37:30] 2024-10-04 13:19:41,959 | INFO     | sum of deviations: -50125406109.0
[2024-10-04 15:37:30] 2024-10-04 13:19:41,959 | INFO     | mean x: 1728035803.0
[2024-10-04 15:37:30] 2024-10-04 13:19:41,960 | INFO     | mean y: 2561659.7974683545
[2024-10-04 15:37:30] 2024-10-04 13:19:41,960 | INFO     | -- intersect: 4535123240.131459
[2024-10-04 15:37:30] 2024-10-04 13:19:41,960 | INFO     | intersect: 4535123240.131459
[2024-10-04 15:37:30] 2024-10-04 13:19:41,961 | INFO     | chi2: 0.8391026876451436
[2024-10-04 15:37:30] 2024-10-04 13:19:41,961 | INFO     | current chi2=0.8391026876451436 (change=4.735420055861452 %)
[2024-10-04 15:37:30] 2024-10-04 13:19:41,961 | INFO     | left removable region: 40
[2024-10-04 15:37:30] 2024-10-04 13:19:41,961 | INFO     | model: linear, x: [1728025006.0, 1728025067.0, 1728025128.0, 1728025189.0, 1728025250.0, 1728025311.0, 1728025372.0, 1728025433.0, 1728025494.0, 1728025555.0, 1728
[2024-10-04 15:37:30] 2024-10-04 13:19:41,962 | INFO     | sum of square deviations: 15579529320.0
[2024-10-04 15:37:30] 2024-10-04 13:19:41,966 | INFO     | sum of deviations: -8447821375.000001
[2024-10-04 15:37:30] 2024-10-04 13:19:41,967 | INFO     | mean x: 1728036230.0
[2024-10-04 15:37:30] 2024-10-04 13:19:41,967 | INFO     | mean y: 2564197.3197831977
[2024-10-04 15:37:30] 2024-10-04 13:19:41,967 | INFO     | -- intersect: 939572055.56286
[2024-10-04 15:37:30] 2024-10-04 13:19:41,967 | INFO     | intersect: 939572055.56286
[2024-10-04 15:37:30] 2024-10-04 13:19:41,968 | INFO     | chi2: 0.04356103850956746
[2024-10-04 15:37:30] 2024-10-04 13:19:41,968 | INFO     | -- intersect: 939572055.56286
[2024-10-04 15:37:30] 2024-10-04 13:19:41,968 | INFO     | current memory leak: -0.54 B/s (using 369 data points, chi2=0.04)
[2024-10-04 15:37:30] 2024-10-04 13:19:41,969 | INFO     | ..............................
[2024-10-04 15:37:30] 2024-10-04 13:19:41,970 | INFO     | . Timing measurements:
[2024-10-04 15:37:30] 2024-10-04 13:19:41,970 | INFO     | . get job = 0 s
[2024-10-04 15:37:30] 2024-10-04 13:19:41,970 | INFO     | . initial setup = 2 s
[2024-10-04 15:37:30] 2024-10-04 13:19:41,970 | INFO     | . payload setup = 10 s
[2024-10-04 15:37:30] 2024-10-04 13:19:41,970 | INFO     | . stage-in = 0 s
[2024-10-04 15:37:30] 2024-10-04 13:19:41,970 | INFO     | . payload execution = 25327 s
[2024-10-04 15:37:30] 2024-10-04 13:19:41,970 | INFO     | . stage-out = 4 s
[2024-10-04 15:37:30] 2024-10-04 13:19:41,970 | INFO     | . log creation = 1 s
[2024-10-04 15:37:30] 2024-10-04 13:19:41,970 | INFO     | ..............................
[2024-10-04 15:37:30] 2024-10-04 13:19:42,112 | INFO     | 
[2024-10-04 15:37:30] 2024-10-04 13:19:42,112 | INFO     | job summary report
[2024-10-04 15:37:30] 2024-10-04 13:19:42,112 | INFO     | --------------------------------------------------
[2024-10-04 15:37:30] 2024-10-04 13:19:42,113 | INFO     | PanDA job id: 6354376804
[2024-10-04 15:37:30] 2024-10-04 13:19:42,113 | INFO     | task id: 41491228
[2024-10-04 15:37:30] 2024-10-04 13:19:42,113 | INFO     | errors: (none)
[2024-10-04 15:37:30] 2024-10-04 13:19:42,113 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-04 15:37:30] 2024-10-04 13:19:42,113 | INFO     | pilot state: finished 
[2024-10-04 15:37:30] 2024-10-04 13:19:42,113 | INFO     | transexitcode: 0
[2024-10-04 15:37:30] 2024-10-04 13:19:42,113 | INFO     | exeerrorcode: 0
[2024-10-04 15:37:30] 2024-10-04 13:19:42,113 | INFO     | exeerrordiag: 
[2024-10-04 15:37:30] 2024-10-04 13:19:42,113 | INFO     | exitcode: 0
[2024-10-04 15:37:30] 2024-10-04 13:19:42,114 | INFO     | exitmsg: OK
[2024-10-04 15:37:30] 2024-10-04 13:19:42,114 | INFO     | cpuconsumptiontime: 94449 s
[2024-10-04 15:37:30] 2024-10-04 13:19:42,114 | INFO     | nevents: 400
[2024-10-04 15:37:30] 2024-10-04 13:19:42,114 | INFO     | neventsw: 0
[2024-10-04 15:37:30] 2024-10-04 13:19:42,114 | INFO     | pid: 9355
[2024-10-04 15:37:30] 2024-10-04 13:19:42,114 | INFO     | pgrp: 9355
[2024-10-04 15:37:30] 2024-10-04 13:19:42,114 | INFO     | corecount: 8
[2024-10-04 15:37:30] 2024-10-04 13:19:42,114 | INFO     | event service: False
[2024-10-04 15:37:30] 2024-10-04 13:19:42,114 | INFO     | sizes: {0: 2434106, 1: 2435642, 2: 2435642, 10: 2435876, 12: 2435904, 25342: 2471558, 25343: 2471685, 25347: 2480821, 25443: 2480935}
[2024-10-04 15:37:30] 2024-10-04 13:19:42,115 | INFO     | --------------------------------------------------
[2024-10-04 15:37:30] 2024-10-04 13:19:42,115 | INFO     | 
[2024-10-04 15:37:30] 2024-10-04 13:19:42,115 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2024-10-04 15:37:30] 2024-10-04 13:19:42,344 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,345 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,345 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,345 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,347 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-04 15:37:30] 2024-10-04 13:19:42,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,347 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-04 15:37:30] 2024-10-04 13:19:42,347 | INFO     | job 6354376804 has completed (purged errors)
[2024-10-04 15:37:30] 2024-10-04 13:19:42,347 | INFO     | overall cleanup function is called
[2024-10-04 15:37:30] 2024-10-04 13:19:43,357 | INFO     | --- collectZombieJob: --- 10, [9355]
[2024-10-04 15:37:30] 2024-10-04 13:19:43,357 | INFO     | zombie collector waiting for pid 9355
[2024-10-04 15:37:30] 2024-10-04 13:19:43,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-04 15:37:30] 2024-10-04 13:19:43,358 | INFO     | collected zombie processes
[2024-10-04 15:37:30] 2024-10-04 13:19:43,358 | INFO     | will  attempt to kill all subprocesses of pid=9355
[2024-10-04 15:37:30] 2024-10-04 13:19:43,468 | INFO     | process IDs to be killed: [9355] (in reverse order)
[2024-10-04 15:37:30] 2024-10-04 13:19:44,203 | WARNING  | found no corresponding commands to process id(s)
[2024-10-04 15:37:30] 2024-10-04 13:19:44,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-04 15:37:30] 2024-10-04 13:19:44,207 | INFO     | did not find any defunct processes belonging to 9355
[2024-10-04 15:37:30] 2024-10-04 13:19:44,212 | INFO     | did not find any defunct processes belonging to 9355
[2024-10-04 15:37:30] 2024-10-04 13:19:44,213 | INFO     | ready for new job
[2024-10-04 15:37:30] 2024-10-04 13:19:44,213 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-04 15:37:30] 2024-10-04 13:19:44,215 | INFO     | *************************************
[2024-10-04 15:37:30] 2024-10-04 13:19:44,216 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-04 15:37:30] 2024-10-04 13:19:44,216 | INFO     | *************************************
[2024-10-04 15:37:30] 2024-10-04 13:19:44,216 | INFO     | 
[2024-10-04 15:37:30] 2024-10-04 13:19:44,216 | INFO     | pilot is running in a VM
[2024-10-04 15:37:30] 2024-10-04 13:19:44,217 | INFO     | architecture information:
[2024-10-04 15:37:30] 2024-10-04 13:19:44,229 | INFO     | executing command: cat /etc/os-release
[2024-10-04 15:37:30] 2024-10-04 13:19:44,378 | INFO     | cat /etc/os-release:
[2024-10-04 15:37:30] NAME="CentOS Linux"
[2024-10-04 15:37:30] VERSION="7 (Core)"
[2024-10-04 15:37:30] ID="centos"
[2024-10-04 15:37:30] ID_LIKE="rhel fedora"
[2024-10-04 15:37:30] VERSION_ID="7"
[2024-10-04 15:37:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-04 15:37:30] ANSI_COLOR="0;31"
[2024-10-04 15:37:30] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-04 15:37:30] HOME_URL="https://www.centos.org/"
[2024-10-04 15:37:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-04 15:37:30] 
[2024-10-04 15:37:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-04 15:37:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-04 15:37:30] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-04 15:37:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-04 15:37:30] 
[2024-10-04 15:37:30] 2024-10-04 13:19:44,378 | INFO     | *************************************
[2024-10-04 15:37:30] 2024-10-04 13:19:44,882 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2024-10-04 15:37:30] 2024-10-04 13:19:45,009 | INFO     | sufficient remaining disk space (490345594880 B)
[2024-10-04 15:37:30] 2024-10-04 13:19:45,009 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-04 15:37:30] 2024-10-04 13:19:45,009 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-04 15:37:30] 2024-10-04 13:19:45,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-04 15:37:30] 2024-10-04 13:19:45,010 | INFO     | aborting loop
[2024-10-04 15:37:30] 2024-10-04 13:19:45,015 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-04 15:37:30] 2024-10-04 13:19:45,016 | INFO     | found 0 job(s) in 20 queues
[2024-10-04 15:37:30] 2024-10-04 13:19:45,016 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-04 15:37:30] 2024-10-04 13:19:45,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-04 15:37:30] 2024-10-04 13:19:45,516 | INFO     | all payload control threads have been joined
[2024-10-04 15:37:30] 2024-10-04 13:19:45,823 | INFO     | all data control threads have been joined
[2024-10-04 15:37:30] 2024-10-04 13:19:46,015 | INFO     | [job] job monitor thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:46,016 | INFO     | [job] retrieve thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:46,165 | INFO     | [job] validate thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:46,185 | INFO     | [payload] validate_pre thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:46,206 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-04 15:37:30] 2024-10-04 13:19:46,300 | INFO     | [payload] failed_post thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:46,388 | INFO     | [job] create_data_payload thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:46,454 | INFO     | all job control threads have been joined
[2024-10-04 15:37:30] 2024-10-04 13:19:46,522 | INFO     | [payload] control thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:46,758 | INFO     | [data] copytool_in thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:46,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-04 15:37:30] 2024-10-04 13:19:46,775 | INFO     | [payload] validate_post thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:46,829 | INFO     | [data] control thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:47,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-04 15:37:30] 2024-10-04 13:19:47,127 | INFO     | [payload] execute_payloads thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:47,460 | INFO     | [job] control thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:48,133 | INFO     | [job] queue monitor thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:48,213 | INFO     | [data] copytool_out thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:50,782 | INFO     | [data] queue_monitor thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:55,710 | INFO     | job.realtimelogging is not enabled
[2024-10-04 15:37:30] 2024-10-04 13:19:56,716 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-04 15:37:30] 2024-10-04 13:19:58,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307528603456)>', '<ExcThread(monitor, started 140306498443008)>']
[2024-10-04 15:37:30] 2024-10-04 13:19:59,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-04 15:37:30] 2024-10-04 13:19:59,100 | INFO     | [monitor] control thread has ended
[2024-10-04 15:37:30] 2024-10-04 13:20:03,317 | INFO     | all workflow threads have been joined
[2024-10-04 15:37:30] 2024-10-04 13:20:03,317 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-04 15:37:30] 2024-10-04 13:20:03,317 | INFO     | traces error code: 0
[2024-10-04 15:37:30] 2024-10-04 13:20:03,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-04 15:37:30] 2024-10-04 13:20:03,647 [wrapper] ==== pilot stdout END ====
[2024-10-04 15:37:30] 2024-10-04 13:20:03,706 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-04 15:37:30] 2024-10-04 13:20:03,767 [wrapper] pilotpid: 360
[2024-10-04 15:37:30] 2024-10-04 13:20:03,883 [wrapper] Pilot exit status: 0
[2024-10-04 15:37:30] 2024-10-04 13:20:04,289 [wrapper] pandaids: 6354376804
[2024-10-04 15:37:30] 2024-10-04 13:20:04,919 [wrapper] cleanup supervisor_pilot 18738 361
[2024-10-04 15:37:30] 2024-10-04 13:20:05,025 [wrapper] Test setup, not cleaning
[2024-10-04 15:37:30] 2024-10-04 13:20:05,128 [wrapper] ==== wrapper stdout END ====
[2024-10-04 15:37:30] 2024-10-04 13:20:05,180 [wrapper] ==== wrapper stderr END ====
[2024-10-04 15:37:30] 2024-10-04 13:20:05,348 [wrapper] apfmon messages muted
[2024-10-04 15:37:30]  *** Error codes and diagnostics ***
[2024-10-04 15:37:30]     "exeErrorCode": 0,
[2024-10-04 15:37:30]     "exeErrorDiag": "",
[2024-10-04 15:37:30]     "pilotErrorCode": 0,
[2024-10-04 15:37:30]     "pilotErrorDiag": "",
[2024-10-04 15:37:30]  *** Listing of results directory ***
[2024-10-04 15:37:30] total 589584
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc    484599 Oct  2 17:04 pilot3.tar.gz
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc      5653 Oct  2 17:27 queuedata.json
[2024-10-04 15:37:30] -rwx------. 1 boinc boinc     33814 Oct  2 17:29 runpilot2-wrapper.sh
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc       100 Oct  4 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-04 15:37:30] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 08:14 run_atlas
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc       105 Oct  4 08:14 job.xml
[2024-10-04 15:37:30] -rw-r--r--. 2 boinc boinc 316057970 Oct  4 08:14 EVNT.41491226._000009.pool.root.1
[2024-10-04 15:37:30] -rw-r--r--. 2 boinc boinc     17537 Oct  4 08:14 start_atlas.sh
[2024-10-04 15:37:30] drwxrwx--x. 2 boinc boinc        68 Oct  4 08:14 shared
[2024-10-04 15:37:30] -rw-r--r--. 2 boinc boinc    498201 Oct  4 08:14 input.tar.gz
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc      6346 Oct  4 08:14 init_data.xml
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc         0 Oct  4 08:14 boinc_lockfile
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc      2675 Oct  4 08:15 pandaJob.out
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc       424 Oct  4 08:15 setup.sh.local
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc   1024526 Oct  4 08:15 agis_schedconf.cvmfs.json
[2024-10-04 15:37:30] drwx------. 4 boinc boinc      4096 Oct  4 08:15 pilot3
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc 277941543 Oct  4 15:16 HITS.41491228._000216.pool.root.1
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc       530 Oct  4 15:16 boinc_task_state.xml
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc      1018 Oct  4 15:17 memory_monitor_summary.json
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc   1615815 Oct  4 15:18 agis_ddmendpoints.agis.ALL.json
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc    500835 Oct  4 15:18 log.41491228._000216.job.log.tgz.1
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc        95 Oct  4 15:19 pilot_heartbeat.json
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc      7683 Oct  4 15:19 heartbeat.json
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc      4469 Oct  4 15:20 pilotlog.txt
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc   2436169 Oct  4 15:20 log.41491228._000216.job.log.1
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc       357 Oct  4 15:20 output.list
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc       620 Oct  4 15:20 runtime_log
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc   2959360 Oct  4 15:20 result.tar.gz
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc       646 Oct  4 15:20 TlpNDmLTGG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmQ9nKDmkmzWXm.diag
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc     10999 Oct  4 15:20 runtime_log.err
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc      8192 Oct  4 15:37 boinc_mmap_file
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc        28 Oct  4 15:37 wrapper_checkpoint.txt
[2024-10-04 15:37:30] -rw-r--r--. 1 boinc boinc     21528 Oct  4 15:37 stderr.txt
[2024-10-04 15:37:30] HITS file was successfully produced:
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc 277941543 Oct  4 15:16 shared/HITS.pool.root.1
[2024-10-04 15:37:30]  *** Contents of shared directory: ***
[2024-10-04 15:37:30] total 583480
[2024-10-04 15:37:30] -rw-r--r--. 2 boinc boinc 316057970 Oct  4 08:14 ATLAS.root_0
[2024-10-04 15:37:30] -rw-r--r--. 2 boinc boinc     17537 Oct  4 08:14 start_atlas.sh
[2024-10-04 15:37:30] -rw-r--r--. 2 boinc boinc    498201 Oct  4 08:14 input.tar.gz
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc 277941543 Oct  4 15:16 HITS.pool.root.1
[2024-10-04 15:37:30] -rw-------. 1 boinc boinc   2959360 Oct  4 15:20 result.tar.gz
15:37:32 (28585): run_atlas exited; CPU time 94359.511361
15:37:32 (28585): called boinc_finish(0)

</stderr_txt>
]]>

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