Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:33:48 (20359): wrapper (7.7.26015): starting
07:33:48 (20359): wrapper: running run_atlas (--nthreads 8)
[2024-10-03 07:33:48] Arguments: --nthreads 8
[2024-10-03 07:33:48] Threads: 8
[2024-10-03 07:33:48] Checking for CVMFS
[2024-10-03 07:33:48] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-03 07:33:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-03 07:33:49] Running cvmfs_config stat atlas.cern.ch
[2024-10-03 07:33:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-03 07:33:50] 2.11.2.0 11686 53848 70832 137917 2 59 22561001 25165824 4026 130560 0 37881855 99.937 19701717 8819 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-03 07:33:50] CVMFS is ok
[2024-10-03 07:33:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-03 07:33:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-03 07:33:50] Further information can be found at the LHC@home message board.
[2024-10-03 07:33:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-03 07:33:50] Checking for apptainer binary...
[2024-10-03 07:33:50] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-03 07:33:50] Running /usr/bin/apptainer --version
[2024-10-03 07:33:50] apptainer version 1.3.2-1.el7
[2024-10-03 07:33:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-03 08:04:14] cg-vwn271.simple-grid.lan
[2024-10-03 08:04:14] apptainer works
[2024-10-03 08:04:14] Set ATHENA_PROC_NUMBER=8
[2024-10-03 08:04:14] Set ATHENA_CORE_NUMBER=8
[2024-10-03 08:04:14] Starting ATLAS job with PandaID=6354280713
[2024-10-03 08:04:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 15:36:06]  *** The last 200 lines of the pilot log: ***
[2024-10-03 15:36:07] 2024-10-03 13:35:42,819 | INFO     | right removable region: 426
[2024-10-03 15:36:07] 2024-10-03 13:35:42,820 | INFO     | model: linear, x: [1727936444.0, 1727936505.0, 1727936566.0, 1727936627.0, 1727936688.0, 1727936749.0, 1727936810.0, 1727936871.0, 1727936932.0, 1727936993.0, 1727
[2024-10-03 15:36:07] 2024-10-03 13:35:42,820 | INFO     | sum of square deviations: 24141245198.0
[2024-10-03 15:36:07] 2024-10-03 13:35:42,826 | INFO     | sum of deviations: 132976450409.99997
[2024-10-03 15:36:07] 2024-10-03 13:35:42,826 | INFO     | mean x: 1727949437.0
[2024-10-03 15:36:07] 2024-10-03 13:35:42,826 | INFO     | mean y: 2522611.8548009368
[2024-10-03 15:36:07] 2024-10-03 13:35:42,826 | INFO     | -- intersect: -9515486121.151808
[2024-10-03 15:36:07] 2024-10-03 13:35:42,826 | INFO     | intersect: -9515486121.151808
[2024-10-03 15:36:07] 2024-10-03 13:35:42,827 | INFO     | chi2: 3.6081461474000567
[2024-10-03 15:36:07] 2024-10-03 13:35:42,827 | INFO     | current chi2=3.6081461474000567 (change=53.4995239839978 %)
[2024-10-03 15:36:07] 2024-10-03 13:35:42,828 | INFO     | model: linear, x: [1727936749.0, 1727936810.0, 1727936871.0, 1727936932.0, 1727936993.0, 1727937054.0, 1727937115.0, 1727937176.0, 1727937237.0, 1727937298.0, 1727
[2024-10-03 15:36:07] 2024-10-03 13:35:42,828 | INFO     | sum of square deviations: 23303080645.5
[2024-10-03 15:36:07] 2024-10-03 13:35:42,834 | INFO     | sum of deviations: 37059155418.00001
[2024-10-03 15:36:07] 2024-10-03 13:35:42,834 | INFO     | mean x: 1727949589.5
[2024-10-03 15:36:07] 2024-10-03 13:35:42,834 | INFO     | mean y: 2540053.151658768
[2024-10-03 15:36:07] 2024-10-03 13:35:42,834 | INFO     | -- intersect: -2745437923.0613585
[2024-10-03 15:36:07] 2024-10-03 13:35:42,834 | INFO     | intersect: -2745437923.0613585
[2024-10-03 15:36:07] 2024-10-03 13:35:42,835 | INFO     | chi2: 1.7876021614461852
[2024-10-03 15:36:07] 2024-10-03 13:35:42,835 | INFO     | current chi2=1.7876021614461852 (change=50.456492380878515 %)
[2024-10-03 15:36:07] 2024-10-03 13:35:42,836 | INFO     | model: linear, x: [1727937054.0, 1727937115.0, 1727937176.0, 1727937237.0, 1727937298.0, 1727937359.0, 1727937420.0, 1727937481.0, 1727937542.0, 1727937603.0, 1727
[2024-10-03 15:36:07] 2024-10-03 13:35:42,836 | INFO     | sum of square deviations: 22484544368.0
[2024-10-03 15:36:07] 2024-10-03 13:35:42,841 | INFO     | sum of deviations: -44630453031.0
[2024-10-03 15:36:07] 2024-10-03 13:35:42,841 | INFO     | mean x: 1727949742.0
[2024-10-03 15:36:07] 2024-10-03 13:35:42,842 | INFO     | mean y: 2555272.3141486812
[2024-10-03 15:36:07] 2024-10-03 13:35:42,842 | INFO     | -- intersect: 3432430414.014399
[2024-10-03 15:36:07] 2024-10-03 13:35:42,842 | INFO     | intersect: 3432430414.014399
[2024-10-03 15:36:07] 2024-10-03 13:35:42,843 | INFO     | chi2: 0.4778170748393026
[2024-10-03 15:36:07] 2024-10-03 13:35:42,843 | INFO     | current chi2=0.4778170748393026 (change=73.27050251199381 %)
[2024-10-03 15:36:07] 2024-10-03 13:35:42,843 | INFO     | model: linear, x: [1727937359.0, 1727937420.0, 1727937481.0, 1727937542.0, 1727937603.0, 1727937664.0, 1727937725.0, 1727937786.0, 1727937847.0, 1727937908.0, 1727
[2024-10-03 15:36:07] 2024-10-03 13:35:42,844 | INFO     | sum of square deviations: 21685403803.0
[2024-10-03 15:36:07] 2024-10-03 13:35:42,849 | INFO     | sum of deviations: -70874155308.5
[2024-10-03 15:36:07] 2024-10-03 13:35:42,849 | INFO     | mean x: 1727949894.5
[2024-10-03 15:36:07] 2024-10-03 13:35:42,849 | INFO     | mean y: 2560258.759708738
[2024-10-03 15:36:07] 2024-10-03 13:35:42,849 | INFO     | -- intersect: 5649998983.011497
[2024-10-03 15:36:07] 2024-10-03 13:35:42,849 | INFO     | intersect: 5649998983.011497
[2024-10-03 15:36:07] 2024-10-03 13:35:42,850 | INFO     | chi2: 0.2674857883154112
[2024-10-03 15:36:07] 2024-10-03 13:35:42,850 | INFO     | current chi2=0.2674857883154112 (change=44.01920684701967 %)
[2024-10-03 15:36:07] 2024-10-03 13:35:42,851 | INFO     | model: linear, x: [1727937664.0, 1727937725.0, 1727937786.0, 1727937847.0, 1727937908.0, 1727937969.0, 1727938030.0, 1727938091.0, 1727938152.0, 1727938213.0, 1727
[2024-10-03 15:36:07] 2024-10-03 13:35:42,851 | INFO     | sum of square deviations: 20905426388.0
[2024-10-03 15:36:07] 2024-10-03 13:35:42,856 | INFO     | sum of deviations: -68554129285.00004
[2024-10-03 15:36:07] 2024-10-03 13:35:42,856 | INFO     | mean x: 1727950047.0
[2024-10-03 15:36:07] 2024-10-03 13:35:42,856 | INFO     | mean y: 2559794.253071253
[2024-10-03 15:36:07] 2024-10-03 13:35:42,857 | INFO     | -- intersect: 5668940796.080255
[2024-10-03 15:36:07] 2024-10-03 13:35:42,857 | INFO     | intersect: 5668940796.080255
[2024-10-03 15:36:07] 2024-10-03 13:35:42,857 | INFO     | chi2: 0.25152638144264755
[2024-10-03 15:36:07] 2024-10-03 13:35:42,857 | INFO     | current chi2=0.25152638144264755 (change=5.966450394719587 %)
[2024-10-03 15:36:07] 2024-10-03 13:35:42,857 | INFO     | left removable region: 50
[2024-10-03 15:36:07] 2024-10-03 13:35:42,858 | INFO     | model: linear, x: [1727939189.0, 1727939250.0, 1727939311.0, 1727939372.0, 1727939433.0, 1727939494.0, 1727939555.0, 1727939616.0, 1727939677.0, 1727939738.0, 1727
[2024-10-03 15:36:07] 2024-10-03 13:35:42,858 | INFO     | sum of square deviations: 16483099750.0
[2024-10-03 15:36:07] 2024-10-03 13:35:42,862 | INFO     | sum of deviations: -3764966970.000011
[2024-10-03 15:36:07] 2024-10-03 13:35:42,863 | INFO     | mean x: 1727950626.5
[2024-10-03 15:36:07] 2024-10-03 13:35:42,863 | INFO     | mean y: 2545905.5319148935
[2024-10-03 15:36:07] 2024-10-03 13:35:42,863 | INFO     | -- intersect: 397233624.0578751
[2024-10-03 15:36:07] 2024-10-03 13:35:42,863 | INFO     | intersect: 397233624.0578751
[2024-10-03 15:36:07] 2024-10-03 13:35:42,864 | INFO     | chi2: 0.11106109220732582
[2024-10-03 15:36:07] 2024-10-03 13:35:42,864 | INFO     | -- intersect: 397233624.0578751
[2024-10-03 15:36:07] 2024-10-03 13:35:42,864 | INFO     | current memory leak: -0.23 B/s (using 376 data points, chi2=0.11)
[2024-10-03 15:36:07] 2024-10-03 13:35:42,865 | INFO     | ..............................
[2024-10-03 15:36:07] 2024-10-03 13:35:42,866 | INFO     | . Timing measurements:
[2024-10-03 15:36:07] 2024-10-03 13:35:42,866 | INFO     | . get job = 0 s
[2024-10-03 15:36:07] 2024-10-03 13:35:42,866 | INFO     | . initial setup = 8 s
[2024-10-03 15:36:07] 2024-10-03 13:35:42,866 | INFO     | . payload setup = 123 s
[2024-10-03 15:36:07] 2024-10-03 13:35:42,866 | INFO     | . stage-in = 0 s
[2024-10-03 15:36:07] 2024-10-03 13:35:42,866 | INFO     | . payload execution = 26506 s
[2024-10-03 15:36:07] 2024-10-03 13:35:42,866 | INFO     | . stage-out = 2 s
[2024-10-03 15:36:07] 2024-10-03 13:35:42,866 | INFO     | . log creation = 0 s
[2024-10-03 15:36:07] 2024-10-03 13:35:42,866 | INFO     | ..............................
[2024-10-03 15:36:07] 2024-10-03 13:35:43,380 | INFO     | 
[2024-10-03 15:36:07] 2024-10-03 13:35:43,380 | INFO     | job summary report
[2024-10-03 15:36:07] 2024-10-03 13:35:43,381 | INFO     | --------------------------------------------------
[2024-10-03 15:36:07] 2024-10-03 13:35:43,381 | INFO     | PanDA job id: 6354280713
[2024-10-03 15:36:07] 2024-10-03 13:35:43,381 | INFO     | task id: 41481123
[2024-10-03 15:36:07] 2024-10-03 13:35:43,381 | INFO     | errors: (none)
[2024-10-03 15:36:07] 2024-10-03 13:35:43,381 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 15:36:07] 2024-10-03 13:35:43,381 | INFO     | pilot state: finished 
[2024-10-03 15:36:07] 2024-10-03 13:35:43,381 | INFO     | transexitcode: 0
[2024-10-03 15:36:07] 2024-10-03 13:35:43,381 | INFO     | exeerrorcode: 0
[2024-10-03 15:36:07] 2024-10-03 13:35:43,381 | INFO     | exeerrordiag: 
[2024-10-03 15:36:07] 2024-10-03 13:35:43,381 | INFO     | exitcode: 0
[2024-10-03 15:36:07] 2024-10-03 13:35:43,382 | INFO     | exitmsg: OK
[2024-10-03 15:36:07] 2024-10-03 13:35:43,382 | INFO     | cpuconsumptiontime: 93745 s
[2024-10-03 15:36:07] 2024-10-03 13:35:43,382 | INFO     | nevents: 400
[2024-10-03 15:36:07] 2024-10-03 13:35:43,382 | INFO     | neventsw: 0
[2024-10-03 15:36:07] 2024-10-03 13:35:43,382 | INFO     | pid: 28977
[2024-10-03 15:36:07] 2024-10-03 13:35:43,382 | INFO     | pgrp: 28977
[2024-10-03 15:36:07] 2024-10-03 13:35:43,382 | INFO     | corecount: 8
[2024-10-03 15:36:07] 2024-10-03 13:35:43,382 | INFO     | event service: False
[2024-10-03 15:36:07] 2024-10-03 13:35:43,382 | INFO     | sizes: {0: 2435218, 1: 2435417, 12: 2435417, 23: 2435445, 34: 2435473, 44: 2435501, 55: 2435657, 66: 2435685, 77: 2435713, 87: 2435769, 88: 2436003, 98: 2436311, 2
[2024-10-03 15:36:07] 2024-10-03 13:35:43,383 | INFO     | --------------------------------------------------
[2024-10-03 15:36:07] 2024-10-03 13:35:43,383 | INFO     | 
[2024-10-03 15:36:07] 2024-10-03 13:35:43,383 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-03 15:36:07] 2024-10-03 13:35:43,677 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,677 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,677 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,677 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,679 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,679 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,679 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 15:36:07] 2024-10-03 13:35:43,679 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,679 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 15:36:07] 2024-10-03 13:35:43,679 | INFO     | job 6354280713 has completed (purged errors)
[2024-10-03 15:36:07] 2024-10-03 13:35:43,679 | INFO     | overall cleanup function is called
[2024-10-03 15:36:07] 2024-10-03 13:35:44,689 | INFO     | --- collectZombieJob: --- 10, [28977]
[2024-10-03 15:36:07] 2024-10-03 13:35:44,689 | INFO     | zombie collector waiting for pid 28977
[2024-10-03 15:36:07] 2024-10-03 13:35:44,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 15:36:07] 2024-10-03 13:35:44,690 | INFO     | collected zombie processes
[2024-10-03 15:36:07] 2024-10-03 13:35:44,690 | INFO     | will  attempt to kill all subprocesses of pid=28977
[2024-10-03 15:36:07] 2024-10-03 13:35:45,374 | INFO     | process IDs to be killed: [28977] (in reverse order)
[2024-10-03 15:36:07] 2024-10-03 13:35:45,468 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 15:36:07] 2024-10-03 13:35:45,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 15:36:07] 2024-10-03 13:35:45,472 | INFO     | did not find any defunct processes belonging to 28977
[2024-10-03 15:36:07] 2024-10-03 13:35:45,475 | INFO     | did not find any defunct processes belonging to 28977
[2024-10-03 15:36:07] 2024-10-03 13:35:45,475 | INFO     | ready for new job
[2024-10-03 15:36:07] 2024-10-03 13:35:45,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 15:36:07] 2024-10-03 13:35:45,479 | INFO     | *************************************
[2024-10-03 15:36:07] 2024-10-03 13:35:45,479 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 15:36:07] 2024-10-03 13:35:45,479 | INFO     | *************************************
[2024-10-03 15:36:07] 2024-10-03 13:35:45,479 | INFO     | 
[2024-10-03 15:36:07] 2024-10-03 13:35:45,480 | INFO     | pilot is running in a VM
[2024-10-03 15:36:07] 2024-10-03 13:35:45,480 | INFO     | architecture information:
[2024-10-03 15:36:07] 2024-10-03 13:35:45,480 | INFO     | executing command: cat /etc/os-release
[2024-10-03 15:36:07] 2024-10-03 13:35:45,512 | INFO     | cat /etc/os-release:
[2024-10-03 15:36:07] NAME="CentOS Linux"
[2024-10-03 15:36:07] VERSION="7 (Core)"
[2024-10-03 15:36:07] ID="centos"
[2024-10-03 15:36:07] ID_LIKE="rhel fedora"
[2024-10-03 15:36:07] VERSION_ID="7"
[2024-10-03 15:36:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 15:36:07] ANSI_COLOR="0;31"
[2024-10-03 15:36:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 15:36:07] HOME_URL="https://www.centos.org/"
[2024-10-03 15:36:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 15:36:07] 
[2024-10-03 15:36:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 15:36:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 15:36:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 15:36:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 15:36:07] 
[2024-10-03 15:36:07] 2024-10-03 13:35:45,512 | INFO     | *************************************
[2024-10-03 15:36:07] 2024-10-03 13:35:46,015 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-03 15:36:07] 2024-10-03 13:35:46,159 | INFO     | sufficient remaining disk space (488129953792 B)
[2024-10-03 15:36:07] 2024-10-03 13:35:46,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 15:36:07] 2024-10-03 13:35:46,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 15:36:07] 2024-10-03 13:35:46,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 15:36:07] 2024-10-03 13:35:46,163 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-03 15:36:07] 2024-10-03 13:35:46,164 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 15:36:07] 2024-10-03 13:35:46,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 15:36:07] 2024-10-03 13:35:46,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 15:36:07] 2024-10-03 13:35:46,426 | INFO     | all payload control threads have been joined
[2024-10-03 15:36:07] 2024-10-03 13:35:46,500 | INFO     | all job control threads have been joined
[2024-10-03 15:36:07] 2024-10-03 13:35:46,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 15:36:07] 2024-10-03 13:35:46,550 | INFO     | aborting loop
[2024-10-03 15:36:07] 2024-10-03 13:35:47,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 15:36:07] 2024-10-03 13:35:47,166 | INFO     | [job] retrieve thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:47,223 | INFO     | all data control threads have been joined
[2024-10-03 15:36:07] 2024-10-03 13:35:47,284 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:47,431 | INFO     | [payload] control thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:47,506 | INFO     | [job] control thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:47,534 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:47,556 | INFO     | [job] job monitor thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:47,909 | INFO     | [job] validate thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:48,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 15:36:07] 2024-10-03 13:35:48,229 | INFO     | [data] control thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:48,448 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:48,508 | INFO     | [payload] failed_post thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:48,519 | INFO     | [data] copytool_in thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:48,728 | INFO     | [payload] validate_post thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:49,027 | INFO     | [job] queue monitor thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:49,053 | INFO     | [data] copytool_out thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:50,168 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:56,606 | INFO     | job.realtimelogging is not enabled
[2024-10-03 15:36:07] 2024-10-03 13:35:57,612 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 15:36:07] 2024-10-03 13:35:59,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139652832769856)>', '<ExcThread(monitor, started 139652254127872)>']
[2024-10-03 15:36:07] 2024-10-03 13:36:00,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 15:36:07] 2024-10-03 13:36:00,248 | INFO     | [monitor] control thread has ended
[2024-10-03 15:36:07] 2024-10-03 13:36:04,305 | INFO     | all workflow threads have been joined
[2024-10-03 15:36:07] 2024-10-03 13:36:04,305 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 15:36:07] 2024-10-03 13:36:04,306 | INFO     | traces error code: 0
[2024-10-03 15:36:07] 2024-10-03 13:36:04,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 15:36:07] 2024-10-03 13:36:04,554 [wrapper] ==== pilot stdout END ====
[2024-10-03 15:36:07] 2024-10-03 13:36:04,592 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 15:36:07] 2024-10-03 13:36:04,625 [wrapper] pilotpid: 19100
[2024-10-03 15:36:07] 2024-10-03 13:36:04,680 [wrapper] Pilot exit status: 0
[2024-10-03 15:36:07] 2024-10-03 13:36:05,082 [wrapper] pandaids: 6354280713
[2024-10-03 15:36:07] 2024-10-03 13:36:05,201 [wrapper] cleanup supervisor_pilot  3470 19101
[2024-10-03 15:36:07] 2024-10-03 13:36:05,231 [wrapper] Test setup, not cleaning
[2024-10-03 15:36:07] 2024-10-03 13:36:05,277 [wrapper] ==== wrapper stdout END ====
[2024-10-03 15:36:07] 2024-10-03 13:36:05,388 [wrapper] ==== wrapper stderr END ====
[2024-10-03 15:36:07] 2024-10-03 13:36:05,564 [wrapper] apfmon messages muted
[2024-10-03 15:36:07]  *** Error codes and diagnostics ***
[2024-10-03 15:36:07]     "exeErrorCode": 0,
[2024-10-03 15:36:07]     "exeErrorDiag": "",
[2024-10-03 15:36:07]     "pilotErrorCode": 0,
[2024-10-03 15:36:07]     "pilotErrorDiag": "",
[2024-10-03 15:36:07]  *** Listing of results directory ***
[2024-10-03 15:36:07] total 815788
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc    484599 Oct  2 15:16 pilot3.tar.gz
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc      5653 Oct  2 15:30 queuedata.json
[2024-10-03 15:36:07] -rwx------. 1 boinc boinc     33814 Oct  2 15:30 runpilot2-wrapper.sh
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc       100 Oct  3 07:33 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 15:36:07] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 07:33 run_atlas
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc       105 Oct  3 07:33 job.xml
[2024-10-03 15:36:07] -rw-r--r--. 2 boinc boinc 593191864 Oct  3 07:33 EVNT.41481121._000028.pool.root.1
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc      6346 Oct  3 07:33 init_data.xml
[2024-10-03 15:36:07] -rw-r--r--. 2 boinc boinc     17537 Oct  3 07:33 start_atlas.sh
[2024-10-03 15:36:07] drwxrwx--x. 2 boinc boinc        68 Oct  3 07:33 shared
[2024-10-03 15:36:07] -rw-r--r--. 2 boinc boinc    498166 Oct  3 07:33 input.tar.gz
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc         0 Oct  3 07:33 boinc_lockfile
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc      2538 Oct  3 08:04 pandaJob.out
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc       424 Oct  3 08:04 setup.sh.local
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc   1024595 Oct  3 08:07 agis_schedconf.cvmfs.json
[2024-10-03 15:36:07] drwx------. 4 boinc boinc      4096 Oct  3 08:07 pilot3
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc 232106050 Oct  3 15:33 HITS.41481123._001768.pool.root.1
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc       532 Oct  3 15:34 boinc_task_state.xml
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc      1028 Oct  3 15:34 memory_monitor_summary.json
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc   1615815 Oct  3 15:34 agis_ddmendpoints.agis.ALL.json
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc    529811 Oct  3 15:34 log.41481123._001768.job.log.tgz.1
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc        95 Oct  3 15:34 pilot_heartbeat.json
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc      8192 Oct  3 15:35 boinc_mmap_file
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc        28 Oct  3 15:35 wrapper_checkpoint.txt
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc      7690 Oct  3 15:35 heartbeat.json
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc      4469 Oct  3 15:36 pilotlog.txt
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc   2572716 Oct  3 15:36 log.41481123._001768.job.log.1
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc       357 Oct  3 15:36 output.list
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc       620 Oct  3 15:36 runtime_log
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc   3123200 Oct  3 15:36 result.tar.gz
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc     10999 Oct  3 15:36 runtime_log.err
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc       646 Oct  3 15:36 bzCODmDcEG6n9Rq4apOajLDm4fhM0noT9bVorHsSDmh4aKDmoZOB6n.diag
[2024-10-03 15:36:07] -rw-r--r--. 1 boinc boinc     21588 Oct  3 15:36 stderr.txt
[2024-10-03 15:36:07] HITS file was successfully produced:
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc 232106050 Oct  3 15:33 shared/HITS.pool.root.1
[2024-10-03 15:36:07]  *** Contents of shared directory: ***
[2024-10-03 15:36:07] total 809520
[2024-10-03 15:36:07] -rw-r--r--. 2 boinc boinc 593191864 Oct  3 07:33 ATLAS.root_0
[2024-10-03 15:36:07] -rw-r--r--. 2 boinc boinc     17537 Oct  3 07:33 start_atlas.sh
[2024-10-03 15:36:07] -rw-r--r--. 2 boinc boinc    498166 Oct  3 07:33 input.tar.gz
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc 232106050 Oct  3 15:33 HITS.pool.root.1
[2024-10-03 15:36:07] -rw-------. 1 boinc boinc   3123200 Oct  3 15:36 result.tar.gz
15:36:08 (20359): run_atlas exited; CPU time 93647.280520
15:36:08 (20359): called boinc_finish(0)

</stderr_txt>
]]>

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