Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:46:36 (21637): wrapper (7.7.26015): starting
08:46:36 (21637): wrapper: running run_atlas (--nthreads 8)
[2024-10-03 08:46:36] Arguments: --nthreads 8
[2024-10-03 08:46:36] Threads: 8
[2024-10-03 08:46:36] Checking for CVMFS
[2024-10-03 08:46:36] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-03 08:46:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-03 08:46:37] Running cvmfs_config stat atlas.cern.ch
[2024-10-03 08:46:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-03 08:46:37] 2.11.2.0 21910 84450 87184 137919 0 199 18221400 25165825 3061 130560 0 59395926 99.924 30336615 8337 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-03 08:46:37] CVMFS is ok
[2024-10-03 08:46:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-03 08:46:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-03 08:46:38] Further information can be found at the LHC@home message board.
[2024-10-03 08:46:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-03 08:46:38] Checking for apptainer binary...
[2024-10-03 08:46:38] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-03 08:46:38] Running /usr/bin/apptainer --version
[2024-10-03 08:46:38] apptainer version 1.3.2-1.el7
[2024-10-03 08:46:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-03 08:46:39] cg-vwn451.simple-grid.lan
[2024-10-03 08:46:39] apptainer works
[2024-10-03 08:46:39] Set ATHENA_PROC_NUMBER=8
[2024-10-03 08:46:39] Set ATHENA_CORE_NUMBER=8
[2024-10-03 08:46:39] Starting ATLAS job with PandaID=6354256957
[2024-10-03 08:46:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 15:30:51]  *** The last 200 lines of the pilot log: ***
[2024-10-03 15:30:51] 2024-10-03 13:26:23,596 | INFO     | chi2: 4.9982825465821215
[2024-10-03 15:30:51] 2024-10-03 13:26:23,597 | INFO     | model: linear, x: [1727938073.0, 1727938134.0, 1727938195.0, 1727938256.0, 1727938317.0, 1727938378.0, 1727938439.0, 1727938500.0, 1727938561.0, 1727938622.0, 1727
[2024-10-03 15:30:51] 2024-10-03 13:26:23,597 | INFO     | sum of square deviations: 17833534372.5
[2024-10-03 15:30:51] 2024-10-03 13:26:23,621 | INFO     | sum of deviations: 214974728893.5
[2024-10-03 15:30:51] 2024-10-03 13:26:23,621 | INFO     | mean x: 1727949815.5
[2024-10-03 15:30:51] 2024-10-03 13:26:23,622 | INFO     | mean y: 2511075.1062176167
[2024-10-03 15:30:51] 2024-10-03 13:26:23,622 | INFO     | -- intersect: -20827097647.968895
[2024-10-03 15:30:51] 2024-10-03 13:26:23,622 | INFO     | intersect: -20827097647.968895
[2024-10-03 15:30:51] 2024-10-03 13:26:23,622 | INFO     | chi2: 4.236833095338969
[2024-10-03 15:30:51] 2024-10-03 13:26:23,623 | INFO     | current chi2=4.236833095338969 (change=15.234221838135984 %)
[2024-10-03 15:30:51] 2024-10-03 13:26:23,623 | INFO     | right removable region: 385
[2024-10-03 15:30:51] 2024-10-03 13:26:23,623 | INFO     | model: linear, x: [1727938378.0, 1727938439.0, 1727938500.0, 1727938561.0, 1727938622.0, 1727938683.0, 1727938744.0, 1727938805.0, 1727938866.0, 1727938927.0, 1727
[2024-10-03 15:30:51] 2024-10-03 13:26:23,624 | INFO     | sum of square deviations: 17833534372.5
[2024-10-03 15:30:51] 2024-10-03 13:26:23,628 | INFO     | sum of deviations: 89687690670.99998
[2024-10-03 15:30:51] 2024-10-03 13:26:23,629 | INFO     | mean x: 1727950120.5
[2024-10-03 15:30:51] 2024-10-03 13:26:23,629 | INFO     | mean y: 2528057.2953367876
[2024-10-03 15:30:51] 2024-10-03 13:26:23,629 | INFO     | -- intersect: -8687608887.252228
[2024-10-03 15:30:51] 2024-10-03 13:26:23,629 | INFO     | intersect: -8687608887.252228
[2024-10-03 15:30:51] 2024-10-03 13:26:23,630 | INFO     | chi2: 2.4405109776667393
[2024-10-03 15:30:51] 2024-10-03 13:26:23,630 | INFO     | current chi2=2.4405109776667393 (change=51.17300883009131 %)
[2024-10-03 15:30:51] 2024-10-03 13:26:23,631 | INFO     | model: linear, x: [1727938683.0, 1727938744.0, 1727938805.0, 1727938866.0, 1727938927.0, 1727938988.0, 1727939049.0, 1727939110.0, 1727939171.0, 1727939232.0, 1727
[2024-10-03 15:30:51] 2024-10-03 13:26:23,631 | INFO     | sum of square deviations: 17149456430.0
[2024-10-03 15:30:51] 2024-10-03 13:26:23,644 | INFO     | sum of deviations: 15312301984.000004
[2024-10-03 15:30:51] 2024-10-03 13:26:23,644 | INFO     | mean x: 1727950273.0
[2024-10-03 15:30:51] 2024-10-03 13:26:23,644 | INFO     | mean y: 2544637.7112860894
[2024-10-03 15:30:51] 2024-10-03 13:26:23,644 | INFO     | -- intersect: -1540297055.3482094
[2024-10-03 15:30:51] 2024-10-03 13:26:23,644 | INFO     | intersect: -1540297055.3482094
[2024-10-03 15:30:51] 2024-10-03 13:26:23,645 | INFO     | chi2: 1.188207662912569
[2024-10-03 15:30:51] 2024-10-03 13:26:23,645 | INFO     | current chi2=1.188207662912569 (change=51.3131604903265 %)
[2024-10-03 15:30:51] 2024-10-03 13:26:23,646 | INFO     | model: linear, x: [1727938988.0, 1727939049.0, 1727939110.0, 1727939171.0, 1727939232.0, 1727939293.0, 1727939354.0, 1727939415.0, 1727939476.0, 1727939537.0, 1727
[2024-10-03 15:30:51] 2024-10-03 13:26:23,646 | INFO     | sum of square deviations: 16483099750.0
[2024-10-03 15:30:51] 2024-10-03 13:26:23,659 | INFO     | sum of deviations: -14823945073.00001
[2024-10-03 15:30:51] 2024-10-03 13:26:23,659 | INFO     | mean x: 1727950425.5
[2024-10-03 15:30:51] 2024-10-03 13:26:23,660 | INFO     | mean y: 2551498.7712765955
[2024-10-03 15:30:51] 2024-10-03 13:26:23,660 | INFO     | -- intersect: 1556570013.7947628
[2024-10-03 15:30:51] 2024-10-03 13:26:23,660 | INFO     | intersect: 1556570013.7947628
[2024-10-03 15:30:51] 2024-10-03 13:26:23,660 | INFO     | chi2: 0.8613451617679347
[2024-10-03 15:30:51] 2024-10-03 13:26:23,661 | INFO     | current chi2=0.8613451617679347 (change=27.50886998518588 %)
[2024-10-03 15:30:51] 2024-10-03 13:26:23,661 | INFO     | model: linear, x: [1727939293.0, 1727939354.0, 1727939415.0, 1727939476.0, 1727939537.0, 1727939598.0, 1727939659.0, 1727939720.0, 1727939781.0, 1727939842.0, 1727
[2024-10-03 15:30:51] 2024-10-03 13:26:23,662 | INFO     | sum of square deviations: 15834231770.0
[2024-10-03 15:30:51] 2024-10-03 13:26:23,666 | INFO     | sum of deviations: -10060793561.999998
[2024-10-03 15:30:51] 2024-10-03 13:26:23,666 | INFO     | mean x: 1727950578.0
[2024-10-03 15:30:51] 2024-10-03 13:26:23,666 | INFO     | mean y: 2550368.51212938
[2024-10-03 15:30:51] 2024-10-03 13:26:23,667 | INFO     | -- intersect: 1100459904.2013733
[2024-10-03 15:30:51] 2024-10-03 13:26:23,667 | INFO     | intersect: 1100459904.2013733
[2024-10-03 15:30:51] 2024-10-03 13:26:23,667 | INFO     | chi2: 0.8450255014089029
[2024-10-03 15:30:51] 2024-10-03 13:26:23,668 | INFO     | current chi2=0.8450255014089029 (change=1.8946713911453708 %)
[2024-10-03 15:30:51] 2024-10-03 13:26:23,668 | INFO     | left removable region: 40
[2024-10-03 15:30:51] 2024-10-03 13:26:23,668 | INFO     | model: linear, x: [1727940513.0, 1727940574.0, 1727940635.0, 1727940696.0, 1727940757.0, 1727940818.0, 1727940879.0, 1727940940.0, 1727941001.0, 1727941062.0, 1727
[2024-10-03 15:30:51] 2024-10-03 13:26:23,668 | INFO     | sum of square deviations: 12733038740.0
[2024-10-03 15:30:51] 2024-10-03 13:26:23,672 | INFO     | sum of deviations: 22767705086.99999
[2024-10-03 15:30:51] 2024-10-03 13:26:23,673 | INFO     | mean x: 1727951005.0
[2024-10-03 15:30:51] 2024-10-03 13:26:23,673 | INFO     | mean y: 2554435.913043478
[2024-10-03 15:30:51] 2024-10-03 13:26:23,673 | INFO     | -- intersect: -3087161985.2768636
[2024-10-03 15:30:51] 2024-10-03 13:26:23,673 | INFO     | intersect: -3087161985.2768636
[2024-10-03 15:30:51] 2024-10-03 13:26:23,674 | INFO     | chi2: 0.0019250447561027768
[2024-10-03 15:30:51] 2024-10-03 13:26:23,674 | INFO     | -- intersect: -3087161985.2768636
[2024-10-03 15:30:51] 2024-10-03 13:26:23,674 | INFO     | current memory leak: 1.79 B/s (using 345 data points, chi2=0.00)
[2024-10-03 15:30:51] 2024-10-03 13:26:23,675 | INFO     | ..............................
[2024-10-03 15:30:51] 2024-10-03 13:26:23,675 | INFO     | . Timing measurements:
[2024-10-03 15:30:51] 2024-10-03 13:26:23,675 | INFO     | . get job = 0 s
[2024-10-03 15:30:51] 2024-10-03 13:26:23,676 | INFO     | . initial setup = 2 s
[2024-10-03 15:30:51] 2024-10-03 13:26:23,682 | INFO     | . payload setup = 9 s
[2024-10-03 15:30:51] 2024-10-03 13:26:23,682 | INFO     | . stage-in = 0 s
[2024-10-03 15:30:51] 2024-10-03 13:26:23,682 | INFO     | . payload execution = 23826 s
[2024-10-03 15:30:51] 2024-10-03 13:26:23,682 | INFO     | . stage-out = 4 s
[2024-10-03 15:30:51] 2024-10-03 13:26:23,683 | INFO     | . log creation = 2 s
[2024-10-03 15:30:51] 2024-10-03 13:26:23,683 | INFO     | ..............................
[2024-10-03 15:30:51] 2024-10-03 13:26:23,832 | INFO     | 
[2024-10-03 15:30:51] 2024-10-03 13:26:23,832 | INFO     | job summary report
[2024-10-03 15:30:51] 2024-10-03 13:26:23,832 | INFO     | --------------------------------------------------
[2024-10-03 15:30:51] 2024-10-03 13:26:23,832 | INFO     | PanDA job id: 6354256957
[2024-10-03 15:30:51] 2024-10-03 13:26:23,833 | INFO     | task id: 41481181
[2024-10-03 15:30:51] 2024-10-03 13:26:23,833 | INFO     | errors: (none)
[2024-10-03 15:30:51] 2024-10-03 13:26:23,833 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 15:30:51] 2024-10-03 13:26:23,833 | INFO     | pilot state: finished 
[2024-10-03 15:30:51] 2024-10-03 13:26:23,833 | INFO     | transexitcode: 0
[2024-10-03 15:30:51] 2024-10-03 13:26:23,833 | INFO     | exeerrorcode: 0
[2024-10-03 15:30:51] 2024-10-03 13:26:23,833 | INFO     | exeerrordiag: 
[2024-10-03 15:30:51] 2024-10-03 13:26:23,833 | INFO     | exitcode: 0
[2024-10-03 15:30:51] 2024-10-03 13:26:23,833 | INFO     | exitmsg: OK
[2024-10-03 15:30:51] 2024-10-03 13:26:23,833 | INFO     | cpuconsumptiontime: 89152 s
[2024-10-03 15:30:51] 2024-10-03 13:26:23,834 | INFO     | nevents: 400
[2024-10-03 15:30:51] 2024-10-03 13:26:23,834 | INFO     | neventsw: 0
[2024-10-03 15:30:51] 2024-10-03 13:26:23,834 | INFO     | pid: 2439
[2024-10-03 15:30:51] 2024-10-03 13:26:23,834 | INFO     | pgrp: 2439
[2024-10-03 15:30:51] 2024-10-03 13:26:23,834 | INFO     | corecount: 8
[2024-10-03 15:30:51] 2024-10-03 13:26:23,834 | INFO     | event service: False
[2024-10-03 15:30:51] 2024-10-03 13:26:23,834 | INFO     | sizes: {0: 2435429, 1: 2435457, 10: 2435663, 12: 2435691, 23841: 2470304, 23847: 2479512, 23941: 2479626}
[2024-10-03 15:30:51] 2024-10-03 13:26:23,834 | INFO     | --------------------------------------------------
[2024-10-03 15:30:51] 2024-10-03 13:26:23,834 | INFO     | 
[2024-10-03 15:30:51] 2024-10-03 13:26:23,834 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2024-10-03 15:30:51] 2024-10-03 13:26:24,522 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,523 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,523 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,523 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,523 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,523 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,523 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,523 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,525 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 15:30:51] 2024-10-03 13:26:24,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,525 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 15:30:51] 2024-10-03 13:26:24,525 | INFO     | job 6354256957 has completed (purged errors)
[2024-10-03 15:30:51] 2024-10-03 13:26:24,525 | INFO     | overall cleanup function is called
[2024-10-03 15:30:51] 2024-10-03 13:26:25,535 | INFO     | --- collectZombieJob: --- 10, [2439]
[2024-10-03 15:30:51] 2024-10-03 13:26:25,535 | INFO     | zombie collector waiting for pid 2439
[2024-10-03 15:30:51] 2024-10-03 13:26:25,535 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 15:30:51] 2024-10-03 13:26:25,535 | INFO     | collected zombie processes
[2024-10-03 15:30:51] 2024-10-03 13:26:25,536 | INFO     | will  attempt to kill all subprocesses of pid=2439
[2024-10-03 15:30:51] 2024-10-03 13:26:26,381 | INFO     | process IDs to be killed: [2439] (in reverse order)
[2024-10-03 15:30:51] 2024-10-03 13:26:27,157 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 15:30:51] 2024-10-03 13:26:27,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 15:30:51] 2024-10-03 13:26:27,165 | INFO     | did not find any defunct processes belonging to 2439
[2024-10-03 15:30:51] 2024-10-03 13:26:27,168 | INFO     | did not find any defunct processes belonging to 2439
[2024-10-03 15:30:51] 2024-10-03 13:26:27,168 | INFO     | ready for new job
[2024-10-03 15:30:51] 2024-10-03 13:26:27,169 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 15:30:51] 2024-10-03 13:26:27,171 | INFO     | *************************************
[2024-10-03 15:30:51] 2024-10-03 13:26:27,171 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 15:30:51] 2024-10-03 13:26:27,171 | INFO     | *************************************
[2024-10-03 15:30:51] 2024-10-03 13:26:27,171 | INFO     | 
[2024-10-03 15:30:51] 2024-10-03 13:26:27,172 | INFO     | pilot is running in a VM
[2024-10-03 15:30:51] 2024-10-03 13:26:27,172 | INFO     | architecture information:
[2024-10-03 15:30:51] 2024-10-03 13:26:27,177 | INFO     | executing command: cat /etc/os-release
[2024-10-03 15:30:51] 2024-10-03 13:26:27,406 | INFO     | cat /etc/os-release:
[2024-10-03 15:30:51] NAME="CentOS Linux"
[2024-10-03 15:30:51] VERSION="7 (Core)"
[2024-10-03 15:30:51] ID="centos"
[2024-10-03 15:30:51] ID_LIKE="rhel fedora"
[2024-10-03 15:30:51] VERSION_ID="7"
[2024-10-03 15:30:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 15:30:51] ANSI_COLOR="0;31"
[2024-10-03 15:30:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 15:30:51] HOME_URL="https://www.centos.org/"
[2024-10-03 15:30:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 15:30:51] 
[2024-10-03 15:30:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 15:30:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 15:30:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 15:30:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 15:30:51] 
[2024-10-03 15:30:51] 2024-10-03 13:26:27,407 | INFO     | *************************************
[2024-10-03 15:30:51] 2024-10-03 13:26:27,912 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2024-10-03 15:30:51] 2024-10-03 13:26:28,249 | INFO     | sufficient remaining disk space (489747906560 B)
[2024-10-03 15:30:51] 2024-10-03 13:26:28,249 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 15:30:51] 2024-10-03 13:26:28,249 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 15:30:51] 2024-10-03 13:26:28,250 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-03 15:30:51] 2024-10-03 13:26:28,250 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 15:30:51] 2024-10-03 13:26:28,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 15:30:51] 2024-10-03 13:26:28,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 15:30:51] 2024-10-03 13:26:28,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 15:30:51] 2024-10-03 13:26:28,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 15:30:51] 2024-10-03 13:26:28,639 | INFO     | aborting loop
[2024-10-03 15:30:51] 2024-10-03 13:26:28,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 15:30:51] 2024-10-03 13:26:29,154 | INFO     | all payload control threads have been joined
[2024-10-03 15:30:51] 2024-10-03 13:26:29,255 | INFO     | [job] retrieve thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:29,270 | INFO     | all data control threads have been joined
[2024-10-03 15:30:51] 2024-10-03 13:26:29,309 | INFO     | [payload] validate_post thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:29,358 | INFO     | all job control threads have been joined
[2024-10-03 15:30:51] 2024-10-03 13:26:29,509 | INFO     | [job] validate thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:29,645 | INFO     | [job] job monitor thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:29,671 | INFO     | [data] copytool_in thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:29,719 | INFO     | [payload] failed_post thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:29,856 | INFO     | [job] queue monitor thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:30,076 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:30,160 | INFO     | [payload] control thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:30,210 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:30,258 | INFO     | [data] copytool_out thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:30,276 | INFO     | [data] control thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:30,364 | INFO     | [job] control thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:30,480 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:30,507 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:30,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 15:30:51] 2024-10-03 13:26:34,711 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 15:30:51] 2024-10-03 13:26:35,556 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140575028352832)>', '<ExcThread(monitor, started 140574564783872)>']
[2024-10-03 15:30:51] 2024-10-03 13:26:36,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 15:30:51] 2024-10-03 13:26:36,298 | INFO     | [monitor] control thread has ended
[2024-10-03 15:30:51] 2024-10-03 13:26:40,582 | INFO     | all workflow threads have been joined
[2024-10-03 15:30:51] 2024-10-03 13:26:40,582 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 15:30:51] 2024-10-03 13:26:40,583 | INFO     | traces error code: 0
[2024-10-03 15:30:51] 2024-10-03 13:26:40,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 15:30:51] 2024-10-03 13:26:40,921 [wrapper] ==== pilot stdout END ====
[2024-10-03 15:30:51] 2024-10-03 13:26:40,998 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 15:30:51] 2024-10-03 13:26:41,119 [wrapper] pilotpid: 27367
[2024-10-03 15:30:51] 2024-10-03 13:26:41,244 [wrapper] Pilot exit status: 0
[2024-10-03 15:30:51] 2024-10-03 13:26:41,657 [wrapper] pandaids: 6354256957
[2024-10-03 15:30:51] 2024-10-03 13:26:42,568 [wrapper] cleanup supervisor_pilot 31076 27368
[2024-10-03 15:30:51] 2024-10-03 13:26:42,658 [wrapper] Test setup, not cleaning
[2024-10-03 15:30:51] 2024-10-03 13:26:42,711 [wrapper] ==== wrapper stdout END ====
[2024-10-03 15:30:51] 2024-10-03 13:26:42,770 [wrapper] ==== wrapper stderr END ====
[2024-10-03 15:30:51] 2024-10-03 13:26:42,951 [wrapper] apfmon messages muted
[2024-10-03 15:30:51]  *** Error codes and diagnostics ***
[2024-10-03 15:30:51]     "exeErrorCode": 0,
[2024-10-03 15:30:51]     "exeErrorDiag": "",
[2024-10-03 15:30:51]     "pilotErrorCode": 0,
[2024-10-03 15:30:51]     "pilotErrorDiag": "",
[2024-10-03 15:30:51]  *** Listing of results directory ***
[2024-10-03 15:30:51] total 886152
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc    484599 Oct  2 15:04 pilot3.tar.gz
[2024-10-03 15:30:51] -rwx------. 1 boinc boinc     33814 Oct  2 15:06 runpilot2-wrapper.sh
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc      5653 Oct  2 15:12 queuedata.json
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc       100 Oct  3 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 15:30:51] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 08:46 run_atlas
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc       105 Oct  3 08:46 job.xml
[2024-10-03 15:30:51] -rw-r--r--. 2 boinc boinc 637008770 Oct  3 08:46 EVNT.41466530._000034.pool.root.1
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc      6347 Oct  3 08:46 init_data.xml
[2024-10-03 15:30:51] drwxrwx--x. 2 boinc boinc        68 Oct  3 08:46 shared
[2024-10-03 15:30:51] -rw-r--r--. 2 boinc boinc    498173 Oct  3 08:46 input.tar.gz
[2024-10-03 15:30:51] -rw-r--r--. 2 boinc boinc     17537 Oct  3 08:46 start_atlas.sh
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc         0 Oct  3 08:46 boinc_lockfile
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc      2530 Oct  3 08:46 pandaJob.out
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc       424 Oct  3 08:46 setup.sh.local
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc   1024595 Oct  3 08:47 agis_schedconf.cvmfs.json
[2024-10-03 15:30:51] drwx------. 4 boinc boinc      4096 Oct  3 08:47 pilot3
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc 261166163 Oct  3 15:23 HITS.41481181._002581.pool.root.1
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc       532 Oct  3 15:23 boinc_task_state.xml
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc      1019 Oct  3 15:24 memory_monitor_summary.json
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc   1615815 Oct  3 15:24 agis_ddmendpoints.agis.ALL.json
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc    519376 Oct  3 15:24 log.41481181._002581.job.log.tgz.1
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc        95 Oct  3 15:25 pilot_heartbeat.json
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc      7693 Oct  3 15:26 heartbeat.json
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc      4397 Oct  3 15:26 pilotlog.txt
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc   2178646 Oct  3 15:26 log.41481181._002581.job.log.1
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc       357 Oct  3 15:26 output.list
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc       620 Oct  3 15:26 runtime_log
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc   2713600 Oct  3 15:26 result.tar.gz
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc     10999 Oct  3 15:26 runtime_log.err
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc       646 Oct  3 15:26 IOfMDmOFEG6n7OlckoGmwREmGgkVDo1bjSoqOlfODmxPsKDmfpBtxm.diag
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc      8192 Oct  3 15:30 boinc_mmap_file
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc        28 Oct  3 15:30 wrapper_checkpoint.txt
[2024-10-03 15:30:51] -rw-r--r--. 1 boinc boinc     21525 Oct  3 15:30 stderr.txt
[2024-10-03 15:30:51] HITS file was successfully produced:
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc 261166163 Oct  3 15:23 shared/HITS.pool.root.1
[2024-10-03 15:30:51]  *** Contents of shared directory: ***
[2024-10-03 15:30:51] total 880288
[2024-10-03 15:30:51] -rw-r--r--. 2 boinc boinc 637008770 Oct  3 08:46 ATLAS.root_0
[2024-10-03 15:30:51] -rw-r--r--. 2 boinc boinc    498173 Oct  3 08:46 input.tar.gz
[2024-10-03 15:30:51] -rw-r--r--. 2 boinc boinc     17537 Oct  3 08:46 start_atlas.sh
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc 261166163 Oct  3 15:23 HITS.pool.root.1
[2024-10-03 15:30:51] -rw-------. 1 boinc boinc   2713600 Oct  3 15:26 result.tar.gz
15:30:53 (21637): run_atlas exited; CPU time 89055.094958
15:30:53 (21637): called boinc_finish(0)

</stderr_txt>
]]>

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