Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:05:40 (24524): wrapper (7.7.26015): starting
00:05:40 (24524): wrapper: running run_atlas (--nthreads 8)
[2024-10-03 00:05:40] Arguments: --nthreads 8
[2024-10-03 00:05:40] Threads: 8
[2024-10-03 00:05:40] Checking for CVMFS
[2024-10-03 00:05:40] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-03 00:05:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-03 00:05:40] Running cvmfs_config stat atlas.cern.ch
[2024-10-03 00:05:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-03 00:05:41] 2.11.2.0 8869 53418 72012 137905 0 154 18943286 25165824 4118 130560 0 35020730 99.943 19208286 8086 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-03 00:05:41] CVMFS is ok
[2024-10-03 00:05:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-03 00:05:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-03 00:05:41] Further information can be found at the LHC@home message board.
[2024-10-03 00:05:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-03 00:05:41] Checking for apptainer binary...
[2024-10-03 00:05:41] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-03 00:05:41] Running /usr/bin/apptainer --version
[2024-10-03 00:05:41] apptainer version 1.3.2-1.el7
[2024-10-03 00:05:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-03 00:05:42] cg-vwn499.simple-grid.lan
[2024-10-03 00:05:42] apptainer works
[2024-10-03 00:05:42] Set ATHENA_PROC_NUMBER=8
[2024-10-03 00:05:42] Set ATHENA_CORE_NUMBER=8
[2024-10-03 00:05:42] Starting ATLAS job with PandaID=6354253620
[2024-10-03 00:05:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 06:16:14]  *** The last 200 lines of the pilot log: ***
[2024-10-03 06:16:14] 2024-10-03 04:15:40,517 | INFO     | model: linear, x: [1727906808.0, 1727906869.0, 1727906930.0, 1727906991.0, 1727907052.0, 1727907113.0, 1727907174.0, 1727907235.0, 1727907296.0, 1727907357.0, 1727
[2024-10-03 06:16:14] 2024-10-03 04:15:40,517 | INFO     | sum of square deviations: 14108461738.0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,521 | INFO     | sum of deviations: 201704868407.00003
[2024-10-03 06:16:14] 2024-10-03 04:15:40,521 | INFO     | mean x: 1727917666.0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,522 | INFO     | mean y: 2492507.7394957985
[2024-10-03 06:16:14] 2024-10-03 04:15:40,522 | INFO     | -- intersect: -24701079852.663544
[2024-10-03 06:16:14] 2024-10-03 04:15:40,522 | INFO     | intersect: -24701079852.663544
[2024-10-03 06:16:14] 2024-10-03 04:15:40,522 | INFO     | chi2: 4.153467785438327
[2024-10-03 06:16:14] 2024-10-03 04:15:40,523 | INFO     | current chi2=4.153467785438327 (change=15.517602336696257 %)
[2024-10-03 06:16:14] 2024-10-03 04:15:40,523 | INFO     | right removable region: 356
[2024-10-03 06:16:14] 2024-10-03 04:15:40,523 | INFO     | model: linear, x: [1727907113.0, 1727907174.0, 1727907235.0, 1727907296.0, 1727907357.0, 1727907418.0, 1727907479.0, 1727907540.0, 1727907601.0, 1727907662.0, 1727
[2024-10-03 06:16:14] 2024-10-03 04:15:40,523 | INFO     | sum of square deviations: 14108461738.0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,527 | INFO     | sum of deviations: 87884674509.0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,527 | INFO     | mean x: 1727917971.0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,527 | INFO     | mean y: 2510465.8655462186
[2024-10-03 06:16:14] 2024-10-03 04:15:40,527 | INFO     | -- intersect: -10761066122.400686
[2024-10-03 06:16:14] 2024-10-03 04:15:40,527 | INFO     | intersect: -10761066122.400686
[2024-10-03 06:16:14] 2024-10-03 04:15:40,528 | INFO     | chi2: 2.424292251720977
[2024-10-03 06:16:14] 2024-10-03 04:15:40,528 | INFO     | current chi2=2.424292251720977 (change=50.68939193894736 %)
[2024-10-03 06:16:14] 2024-10-03 04:15:40,528 | INFO     | model: linear, x: [1727907418.0, 1727907479.0, 1727907540.0, 1727907601.0, 1727907662.0, 1727907723.0, 1727907784.0, 1727907845.0, 1727907906.0, 1727907967.0, 1727
[2024-10-03 06:16:14] 2024-10-03 04:15:40,529 | INFO     | sum of square deviations: 13523929848.0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,532 | INFO     | sum of deviations: 20364242104.5
[2024-10-03 06:16:14] 2024-10-03 04:15:40,532 | INFO     | mean x: 1727918123.5
[2024-10-03 06:16:14] 2024-10-03 04:15:40,533 | INFO     | mean y: 2528081.21875
[2024-10-03 06:16:14] 2024-10-03 04:15:40,533 | INFO     | -- intersect: -2599359343.456934
[2024-10-03 06:16:14] 2024-10-03 04:15:40,533 | INFO     | intersect: -2599359343.456934
[2024-10-03 06:16:14] 2024-10-03 04:15:40,533 | INFO     | chi2: 1.206640580888812
[2024-10-03 06:16:14] 2024-10-03 04:15:40,533 | INFO     | current chi2=1.206640580888812 (change=50.22709906232502 %)
[2024-10-03 06:16:14] 2024-10-03 04:15:40,534 | INFO     | model: linear, x: [1727907723.0, 1727907784.0, 1727907845.0, 1727907906.0, 1727907967.0, 1727908028.0, 1727908089.0, 1727908150.0, 1727908211.0, 1727908272.0, 1727
[2024-10-03 06:16:14] 2024-10-03 04:15:40,534 | INFO     | sum of square deviations: 12955770358.0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,537 | INFO     | sum of deviations: -12365313050.0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,538 | INFO     | mean x: 1727918276.0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,538 | INFO     | mean y: 2536834.340057637
[2024-10-03 06:16:14] 2024-10-03 04:15:40,538 | INFO     | -- intersect: 1651705491.791828
[2024-10-03 06:16:14] 2024-10-03 04:15:40,538 | INFO     | intersect: 1651705491.791828
[2024-10-03 06:16:14] 2024-10-03 04:15:40,539 | INFO     | chi2: 0.8406391388907153
[2024-10-03 06:16:14] 2024-10-03 04:15:40,539 | INFO     | current chi2=0.8406391388907153 (change=30.3322669397129 %)
[2024-10-03 06:16:14] 2024-10-03 04:15:40,539 | INFO     | model: linear, x: [1727908028.0, 1727908089.0, 1727908150.0, 1727908211.0, 1727908272.0, 1727908333.0, 1727908394.0, 1727908455.0, 1727908516.0, 1727908577.0, 1727
[2024-10-03 06:16:14] 2024-10-03 04:15:40,539 | INFO     | sum of square deviations: 12403750705.5
[2024-10-03 06:16:14] 2024-10-03 04:15:40,543 | INFO     | sum of deviations: -20745808725.000004
[2024-10-03 06:16:14] 2024-10-03 04:15:40,543 | INFO     | mean x: 1727918428.5
[2024-10-03 06:16:14] 2024-10-03 04:15:40,543 | INFO     | mean y: 2539134.3333333335
[2024-10-03 06:16:14] 2024-10-03 04:15:40,543 | INFO     | -- intersect: 2892557328.1179357
[2024-10-03 06:16:14] 2024-10-03 04:15:40,543 | INFO     | intersect: 2892557328.1179357
[2024-10-03 06:16:14] 2024-10-03 04:15:40,544 | INFO     | chi2: 0.804272891656141
[2024-10-03 06:16:14] 2024-10-03 04:15:40,544 | INFO     | current chi2=0.804272891656141 (change=4.326023563756761 %)
[2024-10-03 06:16:14] 2024-10-03 04:15:40,544 | INFO     | left removable region: 40
[2024-10-03 06:16:14] 2024-10-03 04:15:40,544 | INFO     | model: linear, x: [1727909248.0, 1727909309.0, 1727909370.0, 1727909431.0, 1727909492.0, 1727909553.0, 1727909614.0, 1727909675.0, 1727909736.0, 1727909797.0, 1727
[2024-10-03 06:16:14] 2024-10-03 04:15:40,544 | INFO     | sum of square deviations: 9784425315.0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,547 | INFO     | sum of deviations: 3899569112.499996
[2024-10-03 06:16:14] 2024-10-03 04:15:40,548 | INFO     | mean x: 1727918855.5
[2024-10-03 06:16:14] 2024-10-03 04:15:40,548 | INFO     | mean y: 2545073.389240506
[2024-10-03 06:16:14] 2024-10-03 04:15:40,548 | INFO     | -- intersect: -686114585.2914026
[2024-10-03 06:16:14] 2024-10-03 04:15:40,548 | INFO     | intersect: -686114585.2914026
[2024-10-03 06:16:14] 2024-10-03 04:15:40,548 | INFO     | chi2: 0.015620470611644352
[2024-10-03 06:16:14] 2024-10-03 04:15:40,549 | INFO     | -- intersect: -686114585.2914026
[2024-10-03 06:16:14] 2024-10-03 04:15:40,549 | INFO     | current memory leak: 0.40 B/s (using 316 data points, chi2=0.02)
[2024-10-03 06:16:14] 2024-10-03 04:15:40,550 | INFO     | ..............................
[2024-10-03 06:16:14] 2024-10-03 04:15:40,550 | INFO     | . Timing measurements:
[2024-10-03 06:16:14] 2024-10-03 04:15:40,550 | INFO     | . get job = 0 s
[2024-10-03 06:16:14] 2024-10-03 04:15:40,550 | INFO     | . initial setup = 2 s
[2024-10-03 06:16:14] 2024-10-03 04:15:40,550 | INFO     | . payload setup = 9 s
[2024-10-03 06:16:14] 2024-10-03 04:15:40,550 | INFO     | . stage-in = 0 s
[2024-10-03 06:16:14] 2024-10-03 04:15:40,550 | INFO     | . payload execution = 22051 s
[2024-10-03 06:16:14] 2024-10-03 04:15:40,550 | INFO     | . stage-out = 4 s
[2024-10-03 06:16:14] 2024-10-03 04:15:40,550 | INFO     | . log creation = 2 s
[2024-10-03 06:16:14] 2024-10-03 04:15:40,551 | INFO     | ..............................
[2024-10-03 06:16:14] 2024-10-03 04:15:40,677 | INFO     | 
[2024-10-03 06:16:14] 2024-10-03 04:15:40,677 | INFO     | job summary report
[2024-10-03 06:16:14] 2024-10-03 04:15:40,677 | INFO     | --------------------------------------------------
[2024-10-03 06:16:14] 2024-10-03 04:15:40,677 | INFO     | PanDA job id: 6354253620
[2024-10-03 06:16:14] 2024-10-03 04:15:40,677 | INFO     | task id: 41481123
[2024-10-03 06:16:14] 2024-10-03 04:15:40,677 | INFO     | errors: (none)
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | pilot state: finished 
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | transexitcode: 0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | exeerrorcode: 0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | exeerrordiag: 
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | exitcode: 0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | exitmsg: OK
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | cpuconsumptiontime: 83011 s
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | nevents: 400
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | neventsw: 0
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | pid: 5166
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | pgrp: 5166
[2024-10-03 06:16:14] 2024-10-03 04:15:40,678 | INFO     | corecount: 8
[2024-10-03 06:16:14] 2024-10-03 04:15:40,679 | INFO     | event service: False
[2024-10-03 06:16:14] 2024-10-03 04:15:40,679 | INFO     | sizes: {0: 2435387, 1: 2435387, 9: 2435621, 11: 2435649, 22065: 2469484, 22070: 2478508, 22072: 2478692, 22161: 2478862}
[2024-10-03 06:16:14] 2024-10-03 04:15:40,679 | INFO     | --------------------------------------------------
[2024-10-03 06:16:14] 2024-10-03 04:15:40,679 | INFO     | 
[2024-10-03 06:16:14] 2024-10-03 04:15:40,679 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-03 06:16:14] 2024-10-03 04:15:40,927 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,927 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,927 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,927 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,929 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 06:16:14] 2024-10-03 04:15:40,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,929 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 06:16:14] 2024-10-03 04:15:40,929 | INFO     | job 6354253620 has completed (purged errors)
[2024-10-03 06:16:14] 2024-10-03 04:15:40,929 | INFO     | overall cleanup function is called
[2024-10-03 06:16:14] 2024-10-03 04:15:41,939 | INFO     | --- collectZombieJob: --- 10, [5166]
[2024-10-03 06:16:14] 2024-10-03 04:15:41,939 | INFO     | zombie collector waiting for pid 5166
[2024-10-03 06:16:14] 2024-10-03 04:15:41,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 06:16:14] 2024-10-03 04:15:41,939 | INFO     | collected zombie processes
[2024-10-03 06:16:14] 2024-10-03 04:15:41,939 | INFO     | will  attempt to kill all subprocesses of pid=5166
[2024-10-03 06:16:14] 2024-10-03 04:15:42,627 | INFO     | process IDs to be killed: [5166] (in reverse order)
[2024-10-03 06:16:14] 2024-10-03 04:15:43,406 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 06:16:14] 2024-10-03 04:15:43,407 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 06:16:14] 2024-10-03 04:15:43,410 | INFO     | did not find any defunct processes belonging to 5166
[2024-10-03 06:16:14] 2024-10-03 04:15:43,413 | INFO     | did not find any defunct processes belonging to 5166
[2024-10-03 06:16:14] 2024-10-03 04:15:43,414 | INFO     | ready for new job
[2024-10-03 06:16:14] 2024-10-03 04:15:43,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 06:16:14] 2024-10-03 04:15:43,416 | INFO     | *************************************
[2024-10-03 06:16:14] 2024-10-03 04:15:43,416 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 06:16:14] 2024-10-03 04:15:43,416 | INFO     | *************************************
[2024-10-03 06:16:14] 2024-10-03 04:15:43,416 | INFO     | 
[2024-10-03 06:16:14] 2024-10-03 04:15:43,417 | INFO     | pilot is running in a VM
[2024-10-03 06:16:14] 2024-10-03 04:15:43,417 | INFO     | architecture information:
[2024-10-03 06:16:14] 2024-10-03 04:15:43,418 | INFO     | executing command: cat /etc/os-release
[2024-10-03 06:16:14] 2024-10-03 04:15:43,453 | INFO     | cat /etc/os-release:
[2024-10-03 06:16:14] NAME="CentOS Linux"
[2024-10-03 06:16:14] VERSION="7 (Core)"
[2024-10-03 06:16:14] ID="centos"
[2024-10-03 06:16:14] ID_LIKE="rhel fedora"
[2024-10-03 06:16:14] VERSION_ID="7"
[2024-10-03 06:16:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 06:16:14] ANSI_COLOR="0;31"
[2024-10-03 06:16:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 06:16:14] HOME_URL="https://www.centos.org/"
[2024-10-03 06:16:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 06:16:14] 
[2024-10-03 06:16:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 06:16:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 06:16:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 06:16:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 06:16:14] 
[2024-10-03 06:16:14] 2024-10-03 04:15:43,454 | INFO     | *************************************
[2024-10-03 06:16:14] 2024-10-03 04:15:43,957 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-03 06:16:14] 2024-10-03 04:15:44,151 | INFO     | sufficient remaining disk space (482564112384 B)
[2024-10-03 06:16:14] 2024-10-03 04:15:44,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 06:16:14] 2024-10-03 04:15:44,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 06:16:14] 2024-10-03 04:15:44,154 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 06:16:14] 2024-10-03 04:15:44,354 | INFO     | all payload control threads have been joined
[2024-10-03 06:16:14] 2024-10-03 04:15:44,391 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-03 06:16:14] 2024-10-03 04:15:44,391 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-03 06:16:14] 2024-10-03 04:15:44,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 06:16:14] 2024-10-03 04:15:44,391 | INFO     | will abort loop
[2024-10-03 06:16:14] 2024-10-03 04:15:44,516 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 06:16:14] 2024-10-03 04:15:44,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 06:16:14] 2024-10-03 04:15:44,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 06:16:14] 2024-10-03 04:15:45,048 | INFO     | all data control threads have been joined
[2024-10-03 06:16:14] 2024-10-03 04:15:45,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 06:16:14] 2024-10-03 04:15:45,158 | INFO     | [job] retrieve thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:45,217 | INFO     | all job control threads have been joined
[2024-10-03 06:16:14] 2024-10-03 04:15:45,360 | INFO     | [payload] control thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:45,368 | INFO     | [payload] validate_post thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:45,398 | INFO     | [job] job monitor thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:45,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 06:16:14] 2024-10-03 04:15:46,054 | INFO     | [data] control thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:46,111 | INFO     | [data] copytool_in thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:46,129 | INFO     | [job] validate thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:46,129 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:46,152 | INFO     | [payload] failed_post thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:46,205 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:46,208 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:46,224 | INFO     | [job] control thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:46,462 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:46,699 | INFO     | [job] queue monitor thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:47,164 | INFO     | [data] copytool_out thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:48,162 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 06:16:14] 2024-10-03 04:15:49,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140231211587392)>', '<ExcThread(monitor, started 140230900291328)>']
[2024-10-03 06:16:14] 2024-10-03 04:15:50,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 06:16:14] 2024-10-03 04:15:50,552 | INFO     | [monitor] control thread has ended
[2024-10-03 06:16:14] 2024-10-03 04:15:54,714 | INFO     | all workflow threads have been joined
[2024-10-03 06:16:14] 2024-10-03 04:15:54,714 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 06:16:14] 2024-10-03 04:15:54,714 | INFO     | traces error code: 0
[2024-10-03 06:16:14] 2024-10-03 04:15:54,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 06:16:14] 2024-10-03 04:15:55,261 [wrapper] ==== pilot stdout END ====
[2024-10-03 06:16:14] 2024-10-03 04:15:55,356 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 06:16:14] 2024-10-03 04:15:55,481 [wrapper] pilotpid: 28569
[2024-10-03 06:16:14] 2024-10-03 04:15:55,593 [wrapper] Pilot exit status: 0
[2024-10-03 06:16:14] 2024-10-03 04:15:56,020 [wrapper] pandaids: 6354253620
[2024-10-03 06:16:14] 2024-10-03 04:15:56,637 [wrapper] cleanup supervisor_pilot  1262 28570
[2024-10-03 06:16:14] 2024-10-03 04:15:56,645 [wrapper] Test setup, not cleaning
[2024-10-03 06:16:14] 2024-10-03 04:15:56,655 [wrapper] ==== wrapper stdout END ====
[2024-10-03 06:16:14] 2024-10-03 04:15:56,666 [wrapper] ==== wrapper stderr END ====
[2024-10-03 06:16:14] 2024-10-03 04:15:56,677 [wrapper] apfmon messages muted
[2024-10-03 06:16:14]  *** Error codes and diagnostics ***
[2024-10-03 06:16:14]     "exeErrorCode": 0,
[2024-10-03 06:16:14]     "exeErrorDiag": "",
[2024-10-03 06:16:14]     "pilotErrorCode": 0,
[2024-10-03 06:16:14]     "pilotErrorDiag": "",
[2024-10-03 06:16:14]  *** Listing of results directory ***
[2024-10-03 06:16:14] total 807924
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc    484599 Oct  2 15:04 pilot3.tar.gz
[2024-10-03 06:16:14] -rwx------. 1 boinc boinc     33814 Oct  2 15:06 runpilot2-wrapper.sh
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc      5653 Oct  2 15:07 queuedata.json
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc       100 Oct  3 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 06:16:14] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 00:05 run_atlas
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc       105 Oct  3 00:05 job.xml
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc      6346 Oct  3 00:05 init_data.xml
[2024-10-03 06:16:14] -rw-r--r--. 2 boinc boinc 595120682 Oct  3 00:05 EVNT.41481121._000048.pool.root.1
[2024-10-03 06:16:14] -rw-r--r--. 2 boinc boinc     17537 Oct  3 00:05 start_atlas.sh
[2024-10-03 06:16:14] drwxrwx--x. 2 boinc boinc        68 Oct  3 00:05 shared
[2024-10-03 06:16:14] -rw-r--r--. 2 boinc boinc    498165 Oct  3 00:05 input.tar.gz
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc         0 Oct  3 00:05 boinc_lockfile
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc      2537 Oct  3 00:05 pandaJob.out
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc       424 Oct  3 00:05 setup.sh.local
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc   1022889 Oct  3 00:05 agis_schedconf.cvmfs.json
[2024-10-03 06:16:14] drwx------. 4 boinc boinc      4096 Oct  3 00:06 pilot3
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc 223322155 Oct  3 06:12 HITS.41481123._001453.pool.root.1
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc       532 Oct  3 06:13 boinc_task_state.xml
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc      1020 Oct  3 06:14 memory_monitor_summary.json
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc   1615815 Oct  3 06:14 agis_ddmendpoints.agis.ALL.json
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc    467407 Oct  3 06:14 log.41481123._001453.job.log.tgz.1
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc        95 Oct  3 06:15 pilot_heartbeat.json
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc      7691 Oct  3 06:15 heartbeat.json
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc      4460 Oct  3 06:15 pilotlog.txt
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc   2038014 Oct  3 06:15 log.41481123._001453.job.log.1
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc       357 Oct  3 06:15 output.list
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc       620 Oct  3 06:15 runtime_log
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc   2529280 Oct  3 06:15 result.tar.gz
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc       646 Oct  3 06:15 VOaNDm8EEG6n7OlckoGmwREmGgkVDo1bjSoqOlfODmBOsKDmtp7ybn.diag
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc     10999 Oct  3 06:15 runtime_log.err
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc      8192 Oct  3 06:16 boinc_mmap_file
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc        28 Oct  3 06:16 wrapper_checkpoint.txt
[2024-10-03 06:16:14] -rw-r--r--. 1 boinc boinc     21515 Oct  3 06:16 stderr.txt
[2024-10-03 06:16:14] HITS file was successfully produced:
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc 223322155 Oct  3 06:12 shared/HITS.pool.root.1
[2024-10-03 06:16:14]  *** Contents of shared directory: ***
[2024-10-03 06:16:14] total 802248
[2024-10-03 06:16:14] -rw-r--r--. 2 boinc boinc 595120682 Oct  3 00:05 ATLAS.root_0
[2024-10-03 06:16:14] -rw-r--r--. 2 boinc boinc     17537 Oct  3 00:05 start_atlas.sh
[2024-10-03 06:16:14] -rw-r--r--. 2 boinc boinc    498165 Oct  3 00:05 input.tar.gz
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc 223322155 Oct  3 06:12 HITS.pool.root.1
[2024-10-03 06:16:14] -rw-------. 1 boinc boinc   2529280 Oct  3 06:15 result.tar.gz
06:16:16 (24524): run_atlas exited; CPU time 82934.768517
06:16:16 (24524): called boinc_finish(0)

</stderr_txt>
]]>

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