Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:24:28 (25901): wrapper (7.7.26015): starting
05:24:28 (25901): wrapper: running run_atlas (--nthreads 8)
[2024-10-03 05:24:28] Arguments: --nthreads 8
[2024-10-03 05:24:28] Threads: 8
[2024-10-03 05:24:28] Checking for CVMFS
[2024-10-03 05:24:29] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-03 05:24:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-03 05:24:29] Running cvmfs_config stat atlas.cern.ch
[2024-10-03 05:24:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-03 05:24:31] 2.11.2.0 3995 53710 79280 137913 2 199 20718915 25165825 3874 130560 0 34636573 99.950 18914514 9128 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-03 05:24:31] CVMFS is ok
[2024-10-03 05:24:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-03 05:24:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-03 05:24:31] Further information can be found at the LHC@home message board.
[2024-10-03 05:24:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-03 05:24:31] Checking for apptainer binary...
[2024-10-03 05:24:31] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-03 05:24:31] Running /usr/bin/apptainer --version
[2024-10-03 05:24:31] apptainer version 1.3.2-1.el7
[2024-10-03 05:24:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-03 05:24:43] cg-vwn302.simple-grid.lan
[2024-10-03 05:24:43] apptainer works
[2024-10-03 05:24:43] Set ATHENA_PROC_NUMBER=8
[2024-10-03 05:24:43] Set ATHENA_CORE_NUMBER=8
[2024-10-03 05:24:43] Starting ATLAS job with PandaID=6354079062
[2024-10-03 05:24:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 12:12:39]  *** The last 200 lines of the pilot log: ***
[2024-10-03 12:12:39] 2024-10-03 10:09:21,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-10-03 12:12:39] 2024-10-03 10:09:21,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-10-03 12:12:39] 2024-10-03 10:09:21,871 | INFO     | fitting pss+swap vs Time
[2024-10-03 12:12:39] 2024-10-03 10:09:21,872 | INFO     | model: linear, x: [1727925953.0, 1727926014.0, 1727926075.0, 1727926136.0, 1727926197.0, 1727926258.0, 1727926319.0, 1727926380.0, 1727926441.0, 1727926502.0, 1727
[2024-10-03 12:12:39] 2024-10-03 10:09:21,872 | INFO     | sum of square deviations: 19255784295.0
[2024-10-03 12:12:39] 2024-10-03 10:09:21,877 | INFO     | sum of deviations: 170707460895.50003
[2024-10-03 12:12:39] 2024-10-03 10:09:21,877 | INFO     | mean x: 1727938000.5
[2024-10-03 12:12:39] 2024-10-03 10:09:21,877 | INFO     | mean y: 2494306.6085858587
[2024-10-03 12:12:39] 2024-10-03 10:09:21,877 | INFO     | -- intersect: -15316118746.550478
[2024-10-03 12:12:39] 2024-10-03 10:09:21,878 | INFO     | intersect: -15316118746.550478
[2024-10-03 12:12:39] 2024-10-03 10:09:21,878 | INFO     | chi2: 6.600440718618481
[2024-10-03 12:12:39] 2024-10-03 10:09:21,879 | INFO     | model: linear, x: [1727925953.0, 1727926014.0, 1727926075.0, 1727926136.0, 1727926197.0, 1727926258.0, 1727926319.0, 1727926380.0, 1727926441.0, 1727926502.0, 1727
[2024-10-03 12:12:39] 2024-10-03 10:09:21,879 | INFO     | sum of square deviations: 18535566140.0
[2024-10-03 12:12:39] 2024-10-03 10:09:21,884 | INFO     | sum of deviations: 223125174140.0
[2024-10-03 12:12:39] 2024-10-03 10:09:21,885 | INFO     | mean x: 1727937848.0
[2024-10-03 12:12:39] 2024-10-03 10:09:21,885 | INFO     | mean y: 2505317.1253196932
[2024-10-03 12:12:39] 2024-10-03 10:09:21,891 | INFO     | -- intersect: -20797853858.636917
[2024-10-03 12:12:39] 2024-10-03 10:09:21,891 | INFO     | intersect: -20797853858.636917
[2024-10-03 12:12:39] 2024-10-03 10:09:21,892 | INFO     | chi2: 4.997610037615658
[2024-10-03 12:12:39] 2024-10-03 10:09:21,892 | INFO     | current chi2=4.997610037615658 (change=24.283691791694583 %)
[2024-10-03 12:12:39] 2024-10-03 10:09:21,892 | INFO     | right removable region: 390
[2024-10-03 12:12:39] 2024-10-03 10:09:21,893 | INFO     | model: linear, x: [1727926258.0, 1727926319.0, 1727926380.0, 1727926441.0, 1727926502.0, 1727926563.0, 1727926624.0, 1727926685.0, 1727926746.0, 1727926807.0, 1727
[2024-10-03 12:12:39] 2024-10-03 10:09:21,893 | INFO     | sum of square deviations: 18535566140.0
[2024-10-03 12:12:39] 2024-10-03 10:09:21,898 | INFO     | sum of deviations: 62702906927.000015
[2024-10-03 12:12:39] 2024-10-03 10:09:21,899 | INFO     | mean x: 1727938153.0
[2024-10-03 12:12:39] 2024-10-03 10:09:21,899 | INFO     | mean y: 2517145.0920716114
[2024-10-03 12:12:39] 2024-10-03 10:09:21,899 | INFO     | -- intersect: -5842826038.106287
[2024-10-03 12:12:39] 2024-10-03 10:09:21,899 | INFO     | intersect: -5842826038.106287
[2024-10-03 12:12:39] 2024-10-03 10:09:21,899 | INFO     | chi2: 3.7917585842459074
[2024-10-03 12:12:39] 2024-10-03 10:09:21,900 | INFO     | current chi2=3.7917585842459074 (change=42.552948418275484 %)
[2024-10-03 12:12:39] 2024-10-03 10:09:21,900 | INFO     | model: linear, x: [1727926563.0, 1727926624.0, 1727926685.0, 1727926746.0, 1727926807.0, 1727926868.0, 1727926929.0, 1727926990.0, 1727927051.0, 1727927112.0, 1727
[2024-10-03 12:12:39] 2024-10-03 10:09:21,900 | INFO     | sum of square deviations: 17833534372.5
[2024-10-03 12:12:39] 2024-10-03 10:09:21,905 | INFO     | sum of deviations: -20835427515.49999
[2024-10-03 12:12:39] 2024-10-03 10:09:21,905 | INFO     | mean x: 1727938305.5
[2024-10-03 12:12:39] 2024-10-03 10:09:21,905 | INFO     | mean y: 2535291.987046632
[2024-10-03 12:12:39] 2024-10-03 10:09:21,905 | INFO     | -- intersect: 2021334962.512151
[2024-10-03 12:12:39] 2024-10-03 10:09:21,905 | INFO     | intersect: 2021334962.512151
[2024-10-03 12:12:39] 2024-10-03 10:09:21,906 | INFO     | chi2: 2.2197630803404294
[2024-10-03 12:12:39] 2024-10-03 10:09:21,906 | INFO     | current chi2=2.2197630803404294 (change=41.458217050970596 %)
[2024-10-03 12:12:39] 2024-10-03 10:09:21,907 | INFO     | model: linear, x: [1727926868.0, 1727926929.0, 1727926990.0, 1727927051.0, 1727927112.0, 1727927173.0, 1727927234.0, 1727927295.0, 1727927356.0, 1727927417.0, 1727
[2024-10-03 12:12:39] 2024-10-03 10:09:21,907 | INFO     | sum of square deviations: 17149456430.0
[2024-10-03 12:12:39] 2024-10-03 10:09:21,913 | INFO     | sum of deviations: -60426562119.0
[2024-10-03 12:12:39] 2024-10-03 10:09:21,913 | INFO     | mean x: 1727938458.0
[2024-10-03 12:12:39] 2024-10-03 10:09:21,914 | INFO     | mean y: 2544083.656167979
[2024-10-03 12:12:39] 2024-10-03 10:09:21,914 | INFO     | -- intersect: 6090980821.947941
[2024-10-03 12:12:39] 2024-10-03 10:09:21,914 | INFO     | intersect: 6090980821.947941
[2024-10-03 12:12:39] 2024-10-03 10:09:21,915 | INFO     | chi2: 1.7443465554570319
[2024-10-03 12:12:39] 2024-10-03 10:09:21,915 | INFO     | current chi2=1.7443465554570319 (change=21.41744446035593 %)
[2024-10-03 12:12:39] 2024-10-03 10:09:21,915 | INFO     | left removable region: 30
[2024-10-03 12:12:39] 2024-10-03 10:09:21,915 | INFO     | model: linear, x: [1727927783.0, 1727927844.0, 1727927905.0, 1727927966.0, 1727928027.0, 1727928088.0, 1727928149.0, 1727928210.0, 1727928271.0, 1727928332.0, 1727
[2024-10-03 12:12:39] 2024-10-03 10:09:21,916 | INFO     | sum of square deviations: 14467136370.0
[2024-10-03 12:12:39] 2024-10-03 10:09:21,923 | INFO     | sum of deviations: -3787373123.999995
[2024-10-03 12:12:39] 2024-10-03 10:09:21,924 | INFO     | mean x: 1727938732.5
[2024-10-03 12:12:39] 2024-10-03 10:09:21,924 | INFO     | mean y: 2555283.811111111
[2024-10-03 12:12:39] 2024-10-03 10:09:21,924 | INFO     | -- intersect: 454914931.77571493
[2024-10-03 12:12:39] 2024-10-03 10:09:21,924 | INFO     | intersect: 454914931.77571493
[2024-10-03 12:12:39] 2024-10-03 10:09:21,924 | INFO     | chi2: 0.04476817844788011
[2024-10-03 12:12:39] 2024-10-03 10:09:21,925 | INFO     | -- intersect: 454914931.77571493
[2024-10-03 12:12:39] 2024-10-03 10:09:21,925 | INFO     | current memory leak: -0.26 B/s (using 360 data points, chi2=0.04)
[2024-10-03 12:12:39] 2024-10-03 10:09:21,927 | INFO     | ..............................
[2024-10-03 12:12:39] 2024-10-03 10:09:21,927 | INFO     | . Timing measurements:
[2024-10-03 12:12:39] 2024-10-03 10:09:21,927 | INFO     | . get job = 0 s
[2024-10-03 12:12:39] 2024-10-03 10:09:21,927 | INFO     | . initial setup = 2 s
[2024-10-03 12:12:39] 2024-10-03 10:09:21,927 | INFO     | . payload setup = 11 s
[2024-10-03 12:12:39] 2024-10-03 10:09:21,927 | INFO     | . stage-in = 0 s
[2024-10-03 12:12:39] 2024-10-03 10:09:21,928 | INFO     | . payload execution = 24125 s
[2024-10-03 12:12:39] 2024-10-03 10:09:21,928 | INFO     | . stage-out = 4 s
[2024-10-03 12:12:39] 2024-10-03 10:09:21,928 | INFO     | . log creation = 2 s
[2024-10-03 12:12:39] 2024-10-03 10:09:21,928 | INFO     | ..............................
[2024-10-03 12:12:39] 2024-10-03 10:09:22,105 | INFO     | 
[2024-10-03 12:12:39] 2024-10-03 10:09:22,105 | INFO     | job summary report
[2024-10-03 12:12:39] 2024-10-03 10:09:22,105 | INFO     | --------------------------------------------------
[2024-10-03 12:12:39] 2024-10-03 10:09:22,105 | INFO     | PanDA job id: 6354079062
[2024-10-03 12:12:39] 2024-10-03 10:09:22,106 | INFO     | task id: 41481181
[2024-10-03 12:12:39] 2024-10-03 10:09:22,106 | INFO     | errors: (none)
[2024-10-03 12:12:39] 2024-10-03 10:09:22,106 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 12:12:39] 2024-10-03 10:09:22,106 | INFO     | pilot state: finished 
[2024-10-03 12:12:39] 2024-10-03 10:09:22,106 | INFO     | transexitcode: 0
[2024-10-03 12:12:39] 2024-10-03 10:09:22,106 | INFO     | exeerrorcode: 0
[2024-10-03 12:12:39] 2024-10-03 10:09:22,106 | INFO     | exeerrordiag: 
[2024-10-03 12:12:39] 2024-10-03 10:09:22,106 | INFO     | exitcode: 0
[2024-10-03 12:12:39] 2024-10-03 10:09:22,106 | INFO     | exitmsg: OK
[2024-10-03 12:12:39] 2024-10-03 10:09:22,106 | INFO     | cpuconsumptiontime: 89650 s
[2024-10-03 12:12:39] 2024-10-03 10:09:22,106 | INFO     | nevents: 400
[2024-10-03 12:12:39] 2024-10-03 10:09:22,107 | INFO     | neventsw: 0
[2024-10-03 12:12:39] 2024-10-03 10:09:22,107 | INFO     | pid: 6487
[2024-10-03 12:12:39] 2024-10-03 10:09:22,107 | INFO     | pgrp: 6487
[2024-10-03 12:12:39] 2024-10-03 10:09:22,107 | INFO     | corecount: 8
[2024-10-03 12:12:39] 2024-10-03 10:09:22,107 | INFO     | event service: False
[2024-10-03 12:12:39] 2024-10-03 10:09:22,107 | INFO     | sizes: {0: 2435263, 1: 2435462, 8: 2435668, 12: 2435696, 24141: 2470343, 24146: 2479367, 24150: 2479551, 24238: 2479721}
[2024-10-03 12:12:39] 2024-10-03 10:09:22,107 | INFO     | --------------------------------------------------
[2024-10-03 12:12:39] 2024-10-03 10:09:22,107 | INFO     | 
[2024-10-03 12:12:39] 2024-10-03 10:09:22,107 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-03 12:12:39] 2024-10-03 10:09:22,228 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,229 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,229 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,229 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,231 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 12:12:39] 2024-10-03 10:09:22,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,231 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 12:12:39] 2024-10-03 10:09:22,231 | INFO     | job 6354079062 has completed (purged errors)
[2024-10-03 12:12:39] 2024-10-03 10:09:22,231 | INFO     | overall cleanup function is called
[2024-10-03 12:12:39] 2024-10-03 10:09:23,241 | INFO     | --- collectZombieJob: --- 10, [6487]
[2024-10-03 12:12:39] 2024-10-03 10:09:23,241 | INFO     | zombie collector waiting for pid 6487
[2024-10-03 12:12:39] 2024-10-03 10:09:23,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 12:12:39] 2024-10-03 10:09:23,242 | INFO     | collected zombie processes
[2024-10-03 12:12:39] 2024-10-03 10:09:23,242 | INFO     | will  attempt to kill all subprocesses of pid=6487
[2024-10-03 12:12:39] 2024-10-03 10:09:24,166 | INFO     | process IDs to be killed: [6487] (in reverse order)
[2024-10-03 12:12:39] 2024-10-03 10:09:24,630 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 12:12:39] 2024-10-03 10:09:24,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 12:12:39] 2024-10-03 10:09:24,633 | INFO     | did not find any defunct processes belonging to 6487
[2024-10-03 12:12:39] 2024-10-03 10:09:24,641 | INFO     | did not find any defunct processes belonging to 6487
[2024-10-03 12:12:39] 2024-10-03 10:09:24,642 | INFO     | ready for new job
[2024-10-03 12:12:39] 2024-10-03 10:09:24,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 12:12:39] 2024-10-03 10:09:24,644 | INFO     | *************************************
[2024-10-03 12:12:39] 2024-10-03 10:09:24,644 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 12:12:39] 2024-10-03 10:09:24,645 | INFO     | *************************************
[2024-10-03 12:12:39] 2024-10-03 10:09:24,645 | INFO     | 
[2024-10-03 12:12:39] 2024-10-03 10:09:24,645 | INFO     | pilot is running in a VM
[2024-10-03 12:12:39] 2024-10-03 10:09:24,645 | INFO     | architecture information:
[2024-10-03 12:12:39] 2024-10-03 10:09:24,651 | INFO     | executing command: cat /etc/os-release
[2024-10-03 12:12:39] 2024-10-03 10:09:24,831 | INFO     | cat /etc/os-release:
[2024-10-03 12:12:39] NAME="CentOS Linux"
[2024-10-03 12:12:39] VERSION="7 (Core)"
[2024-10-03 12:12:39] ID="centos"
[2024-10-03 12:12:39] ID_LIKE="rhel fedora"
[2024-10-03 12:12:39] VERSION_ID="7"
[2024-10-03 12:12:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 12:12:39] ANSI_COLOR="0;31"
[2024-10-03 12:12:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 12:12:39] HOME_URL="https://www.centos.org/"
[2024-10-03 12:12:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 12:12:39] 
[2024-10-03 12:12:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 12:12:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 12:12:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 12:12:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 12:12:39] 
[2024-10-03 12:12:39] 2024-10-03 10:09:24,832 | INFO     | *************************************
[2024-10-03 12:12:39] 2024-10-03 10:09:25,335 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-03 12:12:39] 2024-10-03 10:09:25,460 | INFO     | sufficient remaining disk space (488213839872 B)
[2024-10-03 12:12:39] 2024-10-03 10:09:25,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 12:12:39] 2024-10-03 10:09:25,461 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 12:12:39] 2024-10-03 10:09:25,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 12:12:39] 2024-10-03 10:09:25,608 | INFO     | all payload control threads have been joined
[2024-10-03 12:12:39] 2024-10-03 10:09:25,809 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 12:12:39] 2024-10-03 10:09:25,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 12:12:39] 2024-10-03 10:09:25,907 | INFO     | aborting loop
[2024-10-03 12:12:39] 2024-10-03 10:09:26,142 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 12:12:39] 2024-10-03 10:09:26,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 12:12:39] 2024-10-03 10:09:26,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 12:12:39] 2024-10-03 10:09:26,196 | INFO     | all data control threads have been joined
[2024-10-03 12:12:39] 2024-10-03 10:09:26,465 | INFO     | [job] retrieve thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:26,523 | INFO     | [payload] failed_post thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:26,579 | INFO     | [job] validate thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:26,614 | INFO     | [payload] control thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:26,758 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:26,913 | INFO     | [job] job monitor thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:26,968 | INFO     | all job control threads have been joined
[2024-10-03 12:12:39] 2024-10-03 10:09:27,106 | INFO     | [data] copytool_in thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:27,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 12:12:39] 2024-10-03 10:09:27,202 | INFO     | [data] control thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:27,370 | INFO     | [payload] validate_post thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:27,520 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:27,704 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:27,818 | INFO     | [data] copytool_out thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:27,853 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:27,974 | INFO     | [job] control thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:28,128 | INFO     | [job] queue monitor thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:29,470 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 12:12:39] 2024-10-03 10:09:29,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970286475072)>', '<ExcThread(monitor, started 139969981028096)>']
[2024-10-03 12:12:39] 2024-10-03 10:09:30,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 12:12:39] 2024-10-03 10:09:30,165 | INFO     | [monitor] control thread has ended
[2024-10-03 12:12:39] 2024-10-03 10:09:34,963 | INFO     | all workflow threads have been joined
[2024-10-03 12:12:39] 2024-10-03 10:09:34,963 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 12:12:39] 2024-10-03 10:09:34,964 | INFO     | traces error code: 0
[2024-10-03 12:12:39] 2024-10-03 10:09:34,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 12:12:39] 2024-10-03 10:09:35,286 [wrapper] ==== pilot stdout END ====
[2024-10-03 12:12:39] 2024-10-03 10:09:35,346 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 12:12:39] 2024-10-03 10:09:35,378 [wrapper] pilotpid: 31651
[2024-10-03 12:12:39] 2024-10-03 10:09:35,475 [wrapper] Pilot exit status: 0
[2024-10-03 12:12:39] 2024-10-03 10:09:35,965 [wrapper] pandaids: 6354079062
[2024-10-03 12:12:39] 2024-10-03 10:09:36,810 [wrapper] cleanup supervisor_pilot 27676 31652
[2024-10-03 12:12:39] 2024-10-03 10:09:36,901 [wrapper] Test setup, not cleaning
[2024-10-03 12:12:39] 2024-10-03 10:09:37,004 [wrapper] ==== wrapper stdout END ====
[2024-10-03 12:12:39] 2024-10-03 10:09:37,120 [wrapper] ==== wrapper stderr END ====
[2024-10-03 12:12:39] 2024-10-03 10:09:37,311 [wrapper] apfmon messages muted
[2024-10-03 12:12:39]  *** Error codes and diagnostics ***
[2024-10-03 12:12:39]     "exeErrorCode": 0,
[2024-10-03 12:12:39]     "exeErrorDiag": "",
[2024-10-03 12:12:39]     "pilotErrorCode": 0,
[2024-10-03 12:12:39]     "pilotErrorDiag": "",
[2024-10-03 12:12:39]  *** Listing of results directory ***
[2024-10-03 12:12:39] total 884332
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc    484599 Oct  2 14:18 pilot3.tar.gz
[2024-10-03 12:12:39] -rwx------. 1 boinc boinc     33814 Oct  2 14:22 runpilot2-wrapper.sh
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc      5653 Oct  2 14:23 queuedata.json
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc       100 Oct  3 05:24 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 12:12:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 05:24 run_atlas
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc       105 Oct  3 05:24 job.xml
[2024-10-03 12:12:39] -rw-r--r--. 2 boinc boinc 637714683 Oct  3 05:24 EVNT.41466530._000049.pool.root.1
[2024-10-03 12:12:39] -rw-r--r--. 2 boinc boinc    498159 Oct  3 05:24 input.tar.gz
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc      6346 Oct  3 05:24 init_data.xml
[2024-10-03 12:12:39] -rw-r--r--. 2 boinc boinc     17537 Oct  3 05:24 start_atlas.sh
[2024-10-03 12:12:39] drwxrwx--x. 2 boinc boinc        68 Oct  3 05:24 shared
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc         0 Oct  3 05:24 boinc_lockfile
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc      2535 Oct  3 05:24 pandaJob.out
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc       424 Oct  3 05:24 setup.sh.local
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc   1024603 Oct  3 05:25 agis_schedconf.cvmfs.json
[2024-10-03 12:12:39] drwx------. 4 boinc boinc      4096 Oct  3 05:25 pilot3
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc 258429014 Oct  3 12:06 HITS.41481181._002308.pool.root.1
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc       532 Oct  3 12:06 boinc_task_state.xml
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc      1019 Oct  3 12:07 memory_monitor_summary.json
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc   1615815 Oct  3 12:07 agis_ddmendpoints.agis.ALL.json
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc    511541 Oct  3 12:07 log.41481181._002308.job.log.tgz.1
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc        95 Oct  3 12:08 pilot_heartbeat.json
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc      7689 Oct  3 12:09 heartbeat.json
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc      4274 Oct  3 12:09 pilotlog.txt
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc   2262192 Oct  3 12:09 log.41481181._002308.job.log.1
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc       357 Oct  3 12:09 output.list
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc       620 Oct  3 12:09 runtime_log
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc   2795520 Oct  3 12:09 result.tar.gz
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc       646 Oct  3 12:09 nocKDmJYDG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmifnKDmbLe8Dn.diag
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc     10999 Oct  3 12:09 runtime_log.err
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc      8192 Oct  3 12:12 boinc_mmap_file
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc        28 Oct  3 12:12 wrapper_checkpoint.txt
[2024-10-03 12:12:39] -rw-r--r--. 1 boinc boinc     21469 Oct  3 12:12 stderr.txt
[2024-10-03 12:12:39] HITS file was successfully produced:
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc 258429014 Oct  3 12:06 shared/HITS.pool.root.1
[2024-10-03 12:12:39]  *** Contents of shared directory: ***
[2024-10-03 12:12:39] total 878388
[2024-10-03 12:12:39] -rw-r--r--. 2 boinc boinc 637714683 Oct  3 05:24 ATLAS.root_0
[2024-10-03 12:12:39] -rw-r--r--. 2 boinc boinc    498159 Oct  3 05:24 input.tar.gz
[2024-10-03 12:12:39] -rw-r--r--. 2 boinc boinc     17537 Oct  3 05:24 start_atlas.sh
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc 258429014 Oct  3 12:06 HITS.pool.root.1
[2024-10-03 12:12:39] -rw-------. 1 boinc boinc   2795520 Oct  3 12:09 result.tar.gz
12:12:41 (25901): run_atlas exited; CPU time 89550.892904
12:12:41 (25901): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN