Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:57:26 (11291): wrapper (7.7.26015): starting
09:57:26 (11291): wrapper: running run_atlas (--nthreads 8)
[2024-10-03 09:57:26] Arguments: --nthreads 8
[2024-10-03 09:57:26] Threads: 8
[2024-10-03 09:57:26] Checking for CVMFS
[2024-10-03 09:57:27] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-03 09:57:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-03 09:57:27] Running cvmfs_config stat atlas.cern.ch
[2024-10-03 09:57:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-03 09:57:27] 2.11.2.0 18079 54034 71924 137920 0 252 12966004 25165824 3563 130560 0 35296520 99.931 19522760 8913 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-03 09:57:27] CVMFS is ok
[2024-10-03 09:57:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-03 09:57:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-03 09:57:27] Further information can be found at the LHC@home message board.
[2024-10-03 09:57:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-03 09:57:27] Checking for apptainer binary...
[2024-10-03 09:57:27] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-03 09:57:27] Running /usr/bin/apptainer --version
[2024-10-03 09:57:27] apptainer version 1.3.2-1.el7
[2024-10-03 09:57:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-03 09:57:29] cg-vwn342.simple-grid.lan
[2024-10-03 09:57:29] apptainer works
[2024-10-03 09:57:29] Set ATHENA_PROC_NUMBER=8
[2024-10-03 09:57:29] Set ATHENA_CORE_NUMBER=8
[2024-10-03 09:57:29] Starting ATLAS job with PandaID=6354078263
[2024-10-03 09:57:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 17:02:28]  *** The last 200 lines of the pilot log: ***
[2024-10-03 17:02:28] 2024-10-03 15:01:25,830 | INFO     | model: linear, x: [1727942326.0, 1727942387.0, 1727942448.0, 1727942509.0, 1727942570.0, 1727942631.0, 1727942692.0, 1727942753.0, 1727942814.0, 1727942875.0, 1727
[2024-10-03 17:02:28] 2024-10-03 15:01:25,830 | INFO     | sum of square deviations: 21371126282.5
[2024-10-03 17:02:28] 2024-10-03 15:01:25,835 | INFO     | sum of deviations: 239866528400.50003
[2024-10-03 17:02:28] 2024-10-03 15:01:25,845 | INFO     | mean x: 1727954800.5
[2024-10-03 17:02:28] 2024-10-03 15:01:25,846 | INFO     | mean y: 2504756.241463415
[2024-10-03 17:02:28] 2024-10-03 15:01:25,846 | INFO     | -- intersect: -19391817927.08451
[2024-10-03 17:02:28] 2024-10-03 15:01:25,846 | INFO     | intersect: -19391817927.08451
[2024-10-03 17:02:28] 2024-10-03 15:01:25,846 | INFO     | chi2: 4.182537459520539
[2024-10-03 17:02:28] 2024-10-03 15:01:25,846 | INFO     | current chi2=4.182537459520539 (change=15.41953381172861 %)
[2024-10-03 17:02:28] 2024-10-03 15:01:25,847 | INFO     | right removable region: 409
[2024-10-03 17:02:28] 2024-10-03 15:01:25,847 | INFO     | model: linear, x: [1727942631.0, 1727942692.0, 1727942753.0, 1727942814.0, 1727942875.0, 1727942936.0, 1727942997.0, 1727943058.0, 1727943119.0, 1727943180.0, 1727
[2024-10-03 17:02:28] 2024-10-03 15:01:25,847 | INFO     | sum of square deviations: 21371126282.5
[2024-10-03 17:02:28] 2024-10-03 15:01:25,852 | INFO     | sum of deviations: 106919210400.99998
[2024-10-03 17:02:28] 2024-10-03 15:01:25,852 | INFO     | mean x: 1727955105.5
[2024-10-03 17:02:28] 2024-10-03 15:01:25,853 | INFO     | mean y: 2520660.5853658537
[2024-10-03 17:02:28] 2024-10-03 15:01:25,853 | INFO     | -- intersect: -8642395524.282377
[2024-10-03 17:02:28] 2024-10-03 15:01:25,853 | INFO     | intersect: -8642395524.282377
[2024-10-03 17:02:28] 2024-10-03 15:01:25,853 | INFO     | chi2: 2.3982692716453506
[2024-10-03 17:02:28] 2024-10-03 15:01:25,854 | INFO     | current chi2=2.3982692716453506 (change=51.50151433096239 %)
[2024-10-03 17:02:28] 2024-10-03 15:01:25,854 | INFO     | model: linear, x: [1727942936.0, 1727942997.0, 1727943058.0, 1727943119.0, 1727943180.0, 1727943241.0, 1727943302.0, 1727943363.0, 1727943424.0, 1727943485.0, 1727
[2024-10-03 17:02:28] 2024-10-03 15:01:25,854 | INFO     | sum of square deviations: 20598749010.0
[2024-10-03 17:02:28] 2024-10-03 15:01:25,859 | INFO     | sum of deviations: 28391384451.99999
[2024-10-03 17:02:28] 2024-10-03 15:01:25,860 | INFO     | mean x: 1727955258.0
[2024-10-03 17:02:28] 2024-10-03 15:01:25,860 | INFO     | mean y: 2536165.3185185185
[2024-10-03 17:02:28] 2024-10-03 15:01:25,860 | INFO     | -- intersect: -2379115362.2531953
[2024-10-03 17:02:28] 2024-10-03 15:01:25,860 | INFO     | intersect: -2379115362.2531953
[2024-10-03 17:02:28] 2024-10-03 15:01:25,861 | INFO     | chi2: 1.1630715620627625
[2024-10-03 17:02:28] 2024-10-03 15:01:25,861 | INFO     | current chi2=1.1630715620627625 (change=51.50371245573986 %)
[2024-10-03 17:02:28] 2024-10-03 15:01:25,861 | INFO     | model: linear, x: [1727943241.0, 1727943302.0, 1727943363.0, 1727943424.0, 1727943485.0, 1727943546.0, 1727943607.0, 1727943668.0, 1727943729.0, 1727943790.0, 1727
[2024-10-03 17:02:28] 2024-10-03 15:01:25,862 | INFO     | sum of square deviations: 19845209300.0
[2024-10-03 17:02:28] 2024-10-03 15:01:25,872 | INFO     | sum of deviations: -2527220636.5
[2024-10-03 17:02:28] 2024-10-03 15:01:25,872 | INFO     | mean x: 1727955410.5
[2024-10-03 17:02:28] 2024-10-03 15:01:25,872 | INFO     | mean y: 2542390.3525
[2024-10-03 17:02:28] 2024-10-03 15:01:25,872 | INFO     | -- intersect: 222591698.29139027
[2024-10-03 17:02:28] 2024-10-03 15:01:25,872 | INFO     | intersect: 222591698.29139027
[2024-10-03 17:02:28] 2024-10-03 15:01:25,873 | INFO     | chi2: 0.8484282388018662
[2024-10-03 17:02:28] 2024-10-03 15:01:25,873 | INFO     | current chi2=0.8484282388018662 (change=27.052791377932188 %)
[2024-10-03 17:02:28] 2024-10-03 15:01:25,874 | INFO     | model: linear, x: [1727943546.0, 1727943607.0, 1727943668.0, 1727943729.0, 1727943790.0, 1727943851.0, 1727943912.0, 1727943973.0, 1727944034.0, 1727944095.0, 1727
[2024-10-03 17:02:28] 2024-10-03 15:01:25,874 | INFO     | sum of square deviations: 19110274590.0
[2024-10-03 17:02:28] 2024-10-03 15:01:25,878 | INFO     | sum of deviations: -15326061814.999989
[2024-10-03 17:02:28] 2024-10-03 15:01:25,879 | INFO     | mean x: 1727955563.0
[2024-10-03 17:02:28] 2024-10-03 15:01:25,879 | INFO     | mean y: 2545032.253164557
[2024-10-03 17:02:28] 2024-10-03 15:01:25,879 | INFO     | -- intersect: 1388331178.202578
[2024-10-03 17:02:28] 2024-10-03 15:01:25,879 | INFO     | intersect: 1388331178.202578
[2024-10-03 17:02:28] 2024-10-03 15:01:25,879 | INFO     | chi2: 0.7914892904807453
[2024-10-03 17:02:28] 2024-10-03 15:01:25,880 | INFO     | current chi2=0.7914892904807453 (change=6.711109521947191 %)
[2024-10-03 17:02:28] 2024-10-03 15:01:25,880 | INFO     | left removable region: 40
[2024-10-03 17:02:28] 2024-10-03 15:01:25,880 | INFO     | model: linear, x: [1727944766.0, 1727944827.0, 1727944888.0, 1727944949.0, 1727945010.0, 1727945071.0, 1727945132.0, 1727945193.0, 1727945254.0, 1727945315.0, 1727
[2024-10-03 17:02:28] 2024-10-03 15:01:25,880 | INFO     | sum of square deviations: 15579529320.0
[2024-10-03 17:02:28] 2024-10-03 15:01:25,884 | INFO     | sum of deviations: 9058594977.0
[2024-10-03 17:02:28] 2024-10-03 15:01:25,885 | INFO     | mean x: 1727955990.0
[2024-10-03 17:02:28] 2024-10-03 15:01:25,885 | INFO     | mean y: 2551171.3821138213
[2024-10-03 17:02:28] 2024-10-03 15:01:25,885 | INFO     | -- intersect: -1002155269.3572052
[2024-10-03 17:02:28] 2024-10-03 15:01:25,885 | INFO     | intersect: -1002155269.3572052
[2024-10-03 17:02:28] 2024-10-03 15:01:25,886 | INFO     | chi2: 0.0059607671579094005
[2024-10-03 17:02:28] 2024-10-03 15:01:25,886 | INFO     | -- intersect: -1002155269.3572052
[2024-10-03 17:02:28] 2024-10-03 15:01:25,886 | INFO     | current memory leak: 0.58 B/s (using 369 data points, chi2=0.01)
[2024-10-03 17:02:28] 2024-10-03 15:01:25,887 | INFO     | ..............................
[2024-10-03 17:02:28] 2024-10-03 15:01:25,887 | INFO     | . Timing measurements:
[2024-10-03 17:02:28] 2024-10-03 15:01:25,887 | INFO     | . get job = 0 s
[2024-10-03 17:02:28] 2024-10-03 15:01:25,887 | INFO     | . initial setup = 2 s
[2024-10-03 17:02:28] 2024-10-03 15:01:25,888 | INFO     | . payload setup = 9 s
[2024-10-03 17:02:28] 2024-10-03 15:01:25,888 | INFO     | . stage-in = 0 s
[2024-10-03 17:02:28] 2024-10-03 15:01:25,888 | INFO     | . payload execution = 25294 s
[2024-10-03 17:02:28] 2024-10-03 15:01:25,888 | INFO     | . stage-out = 3 s
[2024-10-03 17:02:28] 2024-10-03 15:01:25,888 | INFO     | . log creation = 1 s
[2024-10-03 17:02:28] 2024-10-03 15:01:25,888 | INFO     | ..............................
[2024-10-03 17:02:28] 2024-10-03 15:01:26,042 | INFO     | 
[2024-10-03 17:02:28] 2024-10-03 15:01:26,042 | INFO     | job summary report
[2024-10-03 17:02:28] 2024-10-03 15:01:26,043 | INFO     | --------------------------------------------------
[2024-10-03 17:02:28] 2024-10-03 15:01:26,043 | INFO     | PanDA job id: 6354078263
[2024-10-03 17:02:28] 2024-10-03 15:01:26,043 | INFO     | task id: 41481181
[2024-10-03 17:02:28] 2024-10-03 15:01:26,043 | INFO     | errors: (none)
[2024-10-03 17:02:28] 2024-10-03 15:01:26,043 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 17:02:28] 2024-10-03 15:01:26,043 | INFO     | pilot state: finished 
[2024-10-03 17:02:28] 2024-10-03 15:01:26,043 | INFO     | transexitcode: 0
[2024-10-03 17:02:28] 2024-10-03 15:01:26,043 | INFO     | exeerrorcode: 0
[2024-10-03 17:02:28] 2024-10-03 15:01:26,043 | INFO     | exeerrordiag: 
[2024-10-03 17:02:28] 2024-10-03 15:01:26,044 | INFO     | exitcode: 0
[2024-10-03 17:02:28] 2024-10-03 15:01:26,044 | INFO     | exitmsg: OK
[2024-10-03 17:02:28] 2024-10-03 15:01:26,044 | INFO     | cpuconsumptiontime: 91250 s
[2024-10-03 17:02:28] 2024-10-03 15:01:26,044 | INFO     | nevents: 400
[2024-10-03 17:02:28] 2024-10-03 15:01:26,044 | INFO     | neventsw: 0
[2024-10-03 17:02:28] 2024-10-03 15:01:26,044 | INFO     | pid: 28123
[2024-10-03 17:02:28] 2024-10-03 15:01:26,044 | INFO     | pgrp: 28123
[2024-10-03 17:02:28] 2024-10-03 15:01:26,044 | INFO     | corecount: 8
[2024-10-03 17:02:28] 2024-10-03 15:01:26,044 | INFO     | event service: False
[2024-10-03 17:02:28] 2024-10-03 15:01:26,045 | INFO     | sizes: {0: 2435261, 1: 2435460, 9: 2435666, 12: 2435694, 25307: 2471246, 25308: 2471245, 25312: 2480453, 25314: 2480509, 25390: 2480679}
[2024-10-03 17:02:28] 2024-10-03 15:01:26,045 | INFO     | --------------------------------------------------
[2024-10-03 17:02:28] 2024-10-03 15:01:26,045 | INFO     | 
[2024-10-03 17:02:28] 2024-10-03 15:01:26,045 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-03 17:02:28] 2024-10-03 15:01:26,409 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,409 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,409 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,409 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,410 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,410 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,410 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,410 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,410 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,410 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,410 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,410 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,410 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,410 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,411 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 17:02:28] 2024-10-03 15:01:26,411 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,411 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 17:02:28] 2024-10-03 15:01:26,411 | INFO     | job 6354078263 has completed (purged errors)
[2024-10-03 17:02:28] 2024-10-03 15:01:26,411 | INFO     | overall cleanup function is called
[2024-10-03 17:02:28] 2024-10-03 15:01:27,421 | INFO     | --- collectZombieJob: --- 10, [28123]
[2024-10-03 17:02:28] 2024-10-03 15:01:27,421 | INFO     | zombie collector waiting for pid 28123
[2024-10-03 17:02:28] 2024-10-03 15:01:27,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 17:02:28] 2024-10-03 15:01:27,422 | INFO     | collected zombie processes
[2024-10-03 17:02:28] 2024-10-03 15:01:27,422 | INFO     | will  attempt to kill all subprocesses of pid=28123
[2024-10-03 17:02:28] 2024-10-03 15:01:28,261 | INFO     | process IDs to be killed: [28123] (in reverse order)
[2024-10-03 17:02:28] 2024-10-03 15:01:29,197 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 17:02:28] 2024-10-03 15:01:29,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 17:02:28] 2024-10-03 15:01:29,201 | INFO     | did not find any defunct processes belonging to 28123
[2024-10-03 17:02:28] 2024-10-03 15:01:29,203 | INFO     | did not find any defunct processes belonging to 28123
[2024-10-03 17:02:28] 2024-10-03 15:01:29,204 | INFO     | ready for new job
[2024-10-03 17:02:28] 2024-10-03 15:01:29,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 17:02:28] 2024-10-03 15:01:29,206 | INFO     | *************************************
[2024-10-03 17:02:28] 2024-10-03 15:01:29,206 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 17:02:28] 2024-10-03 15:01:29,207 | INFO     | *************************************
[2024-10-03 17:02:28] 2024-10-03 15:01:29,207 | INFO     | 
[2024-10-03 17:02:28] 2024-10-03 15:01:29,207 | INFO     | pilot is running in a VM
[2024-10-03 17:02:28] 2024-10-03 15:01:29,207 | INFO     | architecture information:
[2024-10-03 17:02:28] 2024-10-03 15:01:29,225 | INFO     | executing command: cat /etc/os-release
[2024-10-03 17:02:28] 2024-10-03 15:01:29,443 | INFO     | cat /etc/os-release:
[2024-10-03 17:02:28] NAME="CentOS Linux"
[2024-10-03 17:02:28] VERSION="7 (Core)"
[2024-10-03 17:02:28] ID="centos"
[2024-10-03 17:02:28] ID_LIKE="rhel fedora"
[2024-10-03 17:02:28] VERSION_ID="7"
[2024-10-03 17:02:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 17:02:28] ANSI_COLOR="0;31"
[2024-10-03 17:02:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 17:02:28] HOME_URL="https://www.centos.org/"
[2024-10-03 17:02:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 17:02:28] 
[2024-10-03 17:02:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 17:02:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 17:02:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 17:02:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 17:02:28] 
[2024-10-03 17:02:28] 2024-10-03 15:01:29,443 | INFO     | *************************************
[2024-10-03 17:02:28] 2024-10-03 15:01:29,946 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-03 17:02:28] 2024-10-03 15:01:30,174 | INFO     | sufficient remaining disk space (487696891904 B)
[2024-10-03 17:02:28] 2024-10-03 15:01:30,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 17:02:28] 2024-10-03 15:01:30,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 17:02:28] 2024-10-03 15:01:30,210 | INFO     | all job control threads have been joined
[2024-10-03 17:02:28] 2024-10-03 15:01:30,291 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-03 17:02:28] 2024-10-03 15:01:30,291 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-03 17:02:28] 2024-10-03 15:01:30,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 17:02:28] 2024-10-03 15:01:30,292 | INFO     | will abort loop
[2024-10-03 17:02:28] 2024-10-03 15:01:30,563 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 17:02:28] 2024-10-03 15:01:30,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 17:02:28] 2024-10-03 15:01:30,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 17:02:28] 2024-10-03 15:01:30,693 | INFO     | all data control threads have been joined
[2024-10-03 17:02:28] 2024-10-03 15:01:30,841 | INFO     | all payload control threads have been joined
[2024-10-03 17:02:28] 2024-10-03 15:01:31,055 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 17:02:28] 2024-10-03 15:01:31,180 | INFO     | [job] retrieve thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:31,216 | INFO     | [job] control thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:31,227 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:31,297 | INFO     | [job] job monitor thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:31,429 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:31,454 | INFO     | [payload] validate_post thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:31,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 17:02:28] 2024-10-03 15:01:31,651 | INFO     | [job] validate thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:31,699 | INFO     | [data] control thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:31,745 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:31,847 | INFO     | [payload] control thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:31,948 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:32,038 | INFO     | [data] copytool_in thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:32,061 | INFO     | [job] queue monitor thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:32,555 | INFO     | [payload] failed_post thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:33,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 17:02:28] 2024-10-03 15:01:33,518 | INFO     | [data] copytool_out thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:37,140 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 17:02:28] 2024-10-03 15:01:37,745 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139823714416448)>', '<ExcThread(monitor, started 139823062972160)>']
[2024-10-03 17:02:28] 2024-10-03 15:01:38,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 17:02:28] 2024-10-03 15:01:38,608 | INFO     | [monitor] control thread has ended
[2024-10-03 17:02:28] 2024-10-03 15:01:42,771 | INFO     | all workflow threads have been joined
[2024-10-03 17:02:28] 2024-10-03 15:01:42,771 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 17:02:28] 2024-10-03 15:01:42,772 | INFO     | traces error code: 0
[2024-10-03 17:02:28] 2024-10-03 15:01:42,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 17:02:28] 2024-10-03 15:01:43,047 [wrapper] ==== pilot stdout END ====
[2024-10-03 17:02:28] 2024-10-03 15:01:43,083 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 17:02:28] 2024-10-03 15:01:43,180 [wrapper] pilotpid: 20959
[2024-10-03 17:02:28] 2024-10-03 15:01:43,275 [wrapper] Pilot exit status: 0
[2024-10-03 17:02:28] 2024-10-03 15:01:43,708 [wrapper] pandaids: 6354078263
[2024-10-03 17:02:28] 2024-10-03 15:01:44,405 [wrapper] cleanup supervisor_pilot 22624 20960
[2024-10-03 17:02:28] 2024-10-03 15:01:44,509 [wrapper] Test setup, not cleaning
[2024-10-03 17:02:28] 2024-10-03 15:01:44,600 [wrapper] ==== wrapper stdout END ====
[2024-10-03 17:02:28] 2024-10-03 15:01:44,696 [wrapper] ==== wrapper stderr END ====
[2024-10-03 17:02:28] 2024-10-03 15:01:44,845 [wrapper] apfmon messages muted
[2024-10-03 17:02:28]  *** Error codes and diagnostics ***
[2024-10-03 17:02:28]     "exeErrorCode": 0,
[2024-10-03 17:02:28]     "exeErrorDiag": "",
[2024-10-03 17:02:28]     "pilotErrorCode": 0,
[2024-10-03 17:02:28]     "pilotErrorDiag": "",
[2024-10-03 17:02:28]  *** Listing of results directory ***
[2024-10-03 17:02:28] total 892096
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc    484599 Oct  2 14:18 pilot3.tar.gz
[2024-10-03 17:02:28] -rwx------. 1 boinc boinc     33814 Oct  2 14:22 runpilot2-wrapper.sh
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc      5653 Oct  2 14:23 queuedata.json
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc       100 Oct  3 09:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 17:02:28] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 09:57 run_atlas
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc       105 Oct  3 09:57 job.xml
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc      6346 Oct  3 09:57 init_data.xml
[2024-10-03 17:02:28] -rw-r--r--. 2 boinc boinc 638416952 Oct  3 09:57 EVNT.41466530._000041.pool.root.1
[2024-10-03 17:02:28] -rw-r--r--. 2 boinc boinc     17537 Oct  3 09:57 start_atlas.sh
[2024-10-03 17:02:28] drwxrwx--x. 2 boinc boinc        68 Oct  3 09:57 shared
[2024-10-03 17:02:28] -rw-r--r--. 2 boinc boinc    498171 Oct  3 09:57 input.tar.gz
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc         0 Oct  3 09:57 boinc_lockfile
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc      2534 Oct  3 09:57 pandaJob.out
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc       424 Oct  3 09:57 setup.sh.local
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc   1024614 Oct  3 09:57 agis_schedconf.cvmfs.json
[2024-10-03 17:02:28] drwx------. 4 boinc boinc      4096 Oct  3 09:57 pilot3
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc 265249804 Oct  3 16:59 HITS.41481181._001897.pool.root.1
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc       532 Oct  3 16:59 boinc_task_state.xml
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc      1019 Oct  3 16:59 memory_monitor_summary.json
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc   1615815 Oct  3 17:00 agis_ddmendpoints.agis.ALL.json
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc    514539 Oct  3 17:00 log.41481181._001897.job.log.tgz.1
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc        95 Oct  3 17:00 pilot_heartbeat.json
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc      7692 Oct  3 17:01 heartbeat.json
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc      4460 Oct  3 17:01 pilotlog.txt
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc   2474147 Oct  3 17:01 log.41481181._001897.job.log.1
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc       357 Oct  3 17:01 output.list
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc       620 Oct  3 17:01 runtime_log
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc   3010560 Oct  3 17:01 result.tar.gz
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc       646 Oct  3 17:01 wK1NDm7XDG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmzenKDmJaJkem.diag
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc     10999 Oct  3 17:01 runtime_log.err
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc        28 Oct  3 17:02 wrapper_checkpoint.txt
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc      8192 Oct  3 17:02 boinc_mmap_file
[2024-10-03 17:02:28] -rw-r--r--. 1 boinc boinc     21552 Oct  3 17:02 stderr.txt
[2024-10-03 17:02:28] HITS file was successfully produced:
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc 265249804 Oct  3 16:59 shared/HITS.pool.root.1
[2024-10-03 17:02:28]  *** Contents of shared directory: ***
[2024-10-03 17:02:28] total 885940
[2024-10-03 17:02:28] -rw-r--r--. 2 boinc boinc 638416952 Oct  3 09:57 ATLAS.root_0
[2024-10-03 17:02:28] -rw-r--r--. 2 boinc boinc     17537 Oct  3 09:57 start_atlas.sh
[2024-10-03 17:02:28] -rw-r--r--. 2 boinc boinc    498171 Oct  3 09:57 input.tar.gz
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc 265249804 Oct  3 16:59 HITS.pool.root.1
[2024-10-03 17:02:28] -rw-------. 1 boinc boinc   3010560 Oct  3 17:01 result.tar.gz
17:02:30 (11291): run_atlas exited; CPU time 91155.159378
17:02:30 (11291): called boinc_finish(0)

</stderr_txt>
]]>

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