Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:59:31 (27399): wrapper (7.7.26015): starting
21:59:31 (27399): wrapper: running run_atlas (--nthreads 8)
[2024-10-02 21:59:31] Arguments: --nthreads 8
[2024-10-02 21:59:31] Threads: 8
[2024-10-02 21:59:31] Checking for CVMFS
[2024-10-02 21:59:31] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-02 21:59:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-02 21:59:32] Running cvmfs_config stat atlas.cern.ch
[2024-10-02 21:59:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-02 21:59:32] 2.11.2.0 27533 53292 73060 137902 1 99 15528056 25165824 3788 130560 0 37850139 99.906 21208957 9431 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-02 21:59:32] CVMFS is ok
[2024-10-02 21:59:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-02 21:59:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-02 21:59:32] Further information can be found at the LHC@home message board.
[2024-10-02 21:59:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-02 21:59:32] Checking for apptainer binary...
[2024-10-02 21:59:32] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-02 21:59:32] Running /usr/bin/apptainer --version
[2024-10-02 21:59:32] apptainer version 1.3.2-1.el7
[2024-10-02 21:59:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-02 21:59:34] cg-vwn495.simple-grid.lan
[2024-10-02 21:59:34] apptainer works
[2024-10-02 21:59:34] Set ATHENA_PROC_NUMBER=8
[2024-10-02 21:59:34] Set ATHENA_CORE_NUMBER=8
[2024-10-02 21:59:34] Starting ATLAS job with PandaID=6354078170
[2024-10-02 21:59:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 04:32:30]  *** The last 200 lines of the pilot log: ***
[2024-10-03 04:32:30] 2024-10-03 02:32:08,108 | INFO     | mean y: 2506027.395778364
[2024-10-03 04:32:30] 2024-10-03 02:32:08,108 | INFO     | -- intersect: -21469888676.85194
[2024-10-03 04:32:30] 2024-10-03 02:32:08,108 | INFO     | intersect: -21469888676.85194
[2024-10-03 04:32:30] 2024-10-03 02:32:08,108 | INFO     | chi2: 4.240414174764562
[2024-10-03 04:32:30] 2024-10-03 02:32:08,108 | INFO     | current chi2=4.240414174764562 (change=15.241022726485989 %)
[2024-10-03 04:32:30] 2024-10-03 02:32:08,109 | INFO     | right removable region: 378
[2024-10-03 04:32:30] 2024-10-03 02:32:08,109 | INFO     | model: linear, x: [1727899620.0, 1727899681.0, 1727899742.0, 1727899803.0, 1727899864.0, 1727899925.0, 1727899986.0, 1727900047.0, 1727900108.0, 1727900169.0, 1727
[2024-10-03 04:32:30] 2024-10-03 02:32:08,109 | INFO     | sum of square deviations: 16880800230.0
[2024-10-03 04:32:30] 2024-10-03 02:32:08,113 | INFO     | sum of deviations: 85756616248.0
[2024-10-03 04:32:30] 2024-10-03 02:32:08,114 | INFO     | mean x: 1727911149.0
[2024-10-03 04:32:30] 2024-10-03 02:32:08,114 | INFO     | mean y: 2523478.258575198
[2024-10-03 04:32:30] 2024-10-03 02:32:08,114 | INFO     | -- intersect: -8775485342.205605
[2024-10-03 04:32:30] 2024-10-03 02:32:08,114 | INFO     | intersect: -8775485342.205605
[2024-10-03 04:32:30] 2024-10-03 02:32:08,114 | INFO     | chi2: 2.3906055200186156
[2024-10-03 04:32:30] 2024-10-03 02:32:08,115 | INFO     | current chi2=2.3906055200186156 (change=52.21568681968544 %)
[2024-10-03 04:32:30] 2024-10-03 02:32:08,115 | INFO     | model: linear, x: [1727899925.0, 1727899986.0, 1727900047.0, 1727900108.0, 1727900169.0, 1727900230.0, 1727900291.0, 1727900352.0, 1727900413.0, 1727900474.0, 1727
[2024-10-03 04:32:30] 2024-10-03 02:32:08,115 | INFO     | sum of square deviations: 16221466937.5
[2024-10-03 04:32:30] 2024-10-03 02:32:08,119 | INFO     | sum of deviations: 13001754719.999992
[2024-10-03 04:32:30] 2024-10-03 02:32:08,120 | INFO     | mean x: 1727911301.5
[2024-10-03 04:32:30] 2024-10-03 02:32:08,120 | INFO     | mean y: 2540306.117647059
[2024-10-03 04:32:30] 2024-10-03 02:32:08,120 | INFO     | -- intersect: -1382407122.2856019
[2024-10-03 04:32:30] 2024-10-03 02:32:08,120 | INFO     | intersect: -1382407122.2856019
[2024-10-03 04:32:30] 2024-10-03 02:32:08,121 | INFO     | chi2: 1.1445076870595563
[2024-10-03 04:32:30] 2024-10-03 02:32:08,121 | INFO     | current chi2=1.1445076870595563 (change=52.12477853516192 %)
[2024-10-03 04:32:30] 2024-10-03 02:32:08,121 | INFO     | model: linear, x: [1727900230.0, 1727900291.0, 1727900352.0, 1727900413.0, 1727900474.0, 1727900535.0, 1727900596.0, 1727900657.0, 1727900718.0, 1727900779.0, 1727
[2024-10-03 04:32:30] 2024-10-03 02:32:08,122 | INFO     | sum of square deviations: 15579529320.0
[2024-10-03 04:32:30] 2024-10-03 02:32:08,126 | INFO     | sum of deviations: -14779612468.999998
[2024-10-03 04:32:30] 2024-10-03 02:32:08,126 | INFO     | mean x: 1727911454.0
[2024-10-03 04:32:30] 2024-10-03 02:32:08,126 | INFO     | mean y: 2546867.086720867
[2024-10-03 04:32:30] 2024-10-03 02:32:08,126 | INFO     | -- intersect: 1641740269.2957625
[2024-10-03 04:32:30] 2024-10-03 02:32:08,126 | INFO     | intersect: 1641740269.2957625
[2024-10-03 04:32:30] 2024-10-03 02:32:08,127 | INFO     | chi2: 0.8295164021706878
[2024-10-03 04:32:30] 2024-10-03 02:32:08,127 | INFO     | current chi2=0.8295164021706878 (change=27.521989450165872 %)
[2024-10-03 04:32:30] 2024-10-03 02:32:08,128 | INFO     | model: linear, x: [1727900535.0, 1727900596.0, 1727900657.0, 1727900718.0, 1727900779.0, 1727900840.0, 1727900901.0, 1727900962.0, 1727901023.0, 1727901084.0, 1727
[2024-10-03 04:32:30] 2024-10-03 02:32:08,128 | INFO     | sum of square deviations: 14954754815.0
[2024-10-03 04:32:30] 2024-10-03 02:32:08,131 | INFO     | sum of deviations: -23576584241.0
[2024-10-03 04:32:30] 2024-10-03 02:32:08,132 | INFO     | mean x: 1727911606.5
[2024-10-03 04:32:30] 2024-10-03 02:32:08,132 | INFO     | mean y: 2549007.4175824174
[2024-10-03 04:32:30] 2024-10-03 02:32:08,132 | INFO     | -- intersect: 2726649405.9602175
[2024-10-03 04:32:30] 2024-10-03 02:32:08,132 | INFO     | intersect: 2726649405.9602175
[2024-10-03 04:32:30] 2024-10-03 02:32:08,133 | INFO     | chi2: 0.7956074185663733
[2024-10-03 04:32:30] 2024-10-03 02:32:08,133 | INFO     | current chi2=0.7956074185663733 (change=4.087801460656002 %)
[2024-10-03 04:32:30] 2024-10-03 02:32:08,133 | INFO     | left removable region: 40
[2024-10-03 04:32:30] 2024-10-03 02:32:08,133 | INFO     | model: linear, x: [1727901755.0, 1727901816.0, 1727901877.0, 1727901938.0, 1727901999.0, 1727902060.0, 1727902121.0, 1727902182.0, 1727902243.0, 1727902304.0, 1727
[2024-10-03 04:32:30] 2024-10-03 02:32:08,133 | INFO     | sum of square deviations: 11973599384.5
[2024-10-03 04:32:30] 2024-10-03 02:32:08,137 | INFO     | sum of deviations: -2774258375.5000014
[2024-10-03 04:32:30] 2024-10-03 02:32:08,137 | INFO     | mean x: 1727912033.5
[2024-10-03 04:32:30] 2024-10-03 02:32:08,137 | INFO     | mean y: 2556174.2869822485
[2024-10-03 04:32:30] 2024-10-03 02:32:08,137 | INFO     | -- intersect: 402909842.14646447
[2024-10-03 04:32:30] 2024-10-03 02:32:08,137 | INFO     | intersect: 402909842.14646447
[2024-10-03 04:32:30] 2024-10-03 02:32:08,138 | INFO     | chi2: 0.00602786711594144
[2024-10-03 04:32:30] 2024-10-03 02:32:08,138 | INFO     | -- intersect: 402909842.14646447
[2024-10-03 04:32:30] 2024-10-03 02:32:08,138 | INFO     | current memory leak: -0.23 B/s (using 338 data points, chi2=0.01)
[2024-10-03 04:32:30] 2024-10-03 02:32:08,139 | INFO     | ..............................
[2024-10-03 04:32:30] 2024-10-03 02:32:08,139 | INFO     | . Timing measurements:
[2024-10-03 04:32:30] 2024-10-03 02:32:08,139 | INFO     | . get job = 0 s
[2024-10-03 04:32:30] 2024-10-03 02:32:08,139 | INFO     | . initial setup = 2 s
[2024-10-03 04:32:30] 2024-10-03 02:32:08,139 | INFO     | . payload setup = 21 s
[2024-10-03 04:32:30] 2024-10-03 02:32:08,140 | INFO     | . stage-in = 0 s
[2024-10-03 04:32:30] 2024-10-03 02:32:08,140 | INFO     | . payload execution = 23430 s
[2024-10-03 04:32:30] 2024-10-03 02:32:08,140 | INFO     | . stage-out = 1 s
[2024-10-03 04:32:30] 2024-10-03 02:32:08,140 | INFO     | . log creation = 0 s
[2024-10-03 04:32:30] 2024-10-03 02:32:08,140 | INFO     | ..............................
[2024-10-03 04:32:30] 2024-10-03 02:32:08,353 | INFO     | 
[2024-10-03 04:32:30] 2024-10-03 02:32:08,354 | INFO     | job summary report
[2024-10-03 04:32:30] 2024-10-03 02:32:08,354 | INFO     | --------------------------------------------------
[2024-10-03 04:32:30] 2024-10-03 02:32:08,354 | INFO     | PanDA job id: 6354078170
[2024-10-03 04:32:30] 2024-10-03 02:32:08,354 | INFO     | task id: 41481181
[2024-10-03 04:32:30] 2024-10-03 02:32:08,354 | INFO     | errors: (none)
[2024-10-03 04:32:30] 2024-10-03 02:32:08,354 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 04:32:30] 2024-10-03 02:32:08,354 | INFO     | pilot state: finished 
[2024-10-03 04:32:30] 2024-10-03 02:32:08,354 | INFO     | transexitcode: 0
[2024-10-03 04:32:30] 2024-10-03 02:32:08,354 | INFO     | exeerrorcode: 0
[2024-10-03 04:32:30] 2024-10-03 02:32:08,354 | INFO     | exeerrordiag: 
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | exitcode: 0
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | exitmsg: OK
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | cpuconsumptiontime: 84543 s
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | nevents: 400
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | neventsw: 0
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | pid: 7253
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | pgrp: 7253
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | corecount: 8
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | event service: False
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | sizes: {0: 2435207, 1: 2435462, 2: 2435462, 12: 2435490, 22: 2435724, 23: 2435752, 23456: 2470387, 23458: 2479467, 23474: 2479581}
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | --------------------------------------------------
[2024-10-03 04:32:30] 2024-10-03 02:32:08,355 | INFO     | 
[2024-10-03 04:32:30] 2024-10-03 02:32:08,356 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-03 04:32:30] 2024-10-03 02:32:08,490 | WARNING  | process 7253 is no longer using CPU - aborting
[2024-10-03 04:32:30] 2024-10-03 02:32:08,490 | INFO     | aborting job monitoring since job object (job id=6354078170) has expired
[2024-10-03 04:32:30] 2024-10-03 02:32:08,556 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,556 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,556 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,556 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,558 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 04:32:30] 2024-10-03 02:32:08,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,558 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 04:32:30] 2024-10-03 02:32:08,558 | INFO     | job 6354078170 has completed (purged errors)
[2024-10-03 04:32:30] 2024-10-03 02:32:08,558 | INFO     | overall cleanup function is called
[2024-10-03 04:32:30] 2024-10-03 02:32:09,570 | INFO     | --- collectZombieJob: --- 10, [7253]
[2024-10-03 04:32:30] 2024-10-03 02:32:09,570 | INFO     | zombie collector waiting for pid 7253
[2024-10-03 04:32:30] 2024-10-03 02:32:09,571 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 04:32:30] 2024-10-03 02:32:09,571 | INFO     | collected zombie processes
[2024-10-03 04:32:30] 2024-10-03 02:32:09,571 | INFO     | will  attempt to kill all subprocesses of pid=7253
[2024-10-03 04:32:30] 2024-10-03 02:32:09,874 | INFO     | process IDs to be killed: [7253] (in reverse order)
[2024-10-03 04:32:30] 2024-10-03 02:32:09,937 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 04:32:30] 2024-10-03 02:32:09,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 04:32:30] 2024-10-03 02:32:09,941 | INFO     | did not find any defunct processes belonging to 7253
[2024-10-03 04:32:30] 2024-10-03 02:32:09,945 | INFO     | did not find any defunct processes belonging to 7253
[2024-10-03 04:32:30] 2024-10-03 02:32:09,945 | INFO     | ready for new job
[2024-10-03 04:32:30] 2024-10-03 02:32:09,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 04:32:30] 2024-10-03 02:32:09,947 | INFO     | *************************************
[2024-10-03 04:32:30] 2024-10-03 02:32:09,948 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 04:32:30] 2024-10-03 02:32:09,948 | INFO     | *************************************
[2024-10-03 04:32:30] 2024-10-03 02:32:09,948 | INFO     | 
[2024-10-03 04:32:30] 2024-10-03 02:32:09,948 | INFO     | pilot is running in a VM
[2024-10-03 04:32:30] 2024-10-03 02:32:09,948 | INFO     | architecture information:
[2024-10-03 04:32:30] 2024-10-03 02:32:09,949 | INFO     | executing command: cat /etc/os-release
[2024-10-03 04:32:30] 2024-10-03 02:32:09,975 | INFO     | cat /etc/os-release:
[2024-10-03 04:32:30] NAME="CentOS Linux"
[2024-10-03 04:32:30] VERSION="7 (Core)"
[2024-10-03 04:32:30] ID="centos"
[2024-10-03 04:32:30] ID_LIKE="rhel fedora"
[2024-10-03 04:32:30] VERSION_ID="7"
[2024-10-03 04:32:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 04:32:30] ANSI_COLOR="0;31"
[2024-10-03 04:32:30] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 04:32:30] HOME_URL="https://www.centos.org/"
[2024-10-03 04:32:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 04:32:30] 
[2024-10-03 04:32:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 04:32:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 04:32:30] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 04:32:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 04:32:30] 
[2024-10-03 04:32:30] 2024-10-03 02:32:09,975 | INFO     | *************************************
[2024-10-03 04:32:30] 2024-10-03 02:32:10,478 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-03 04:32:30] 2024-10-03 02:32:10,587 | INFO     | sufficient remaining disk space (485139415040 B)
[2024-10-03 04:32:30] 2024-10-03 02:32:10,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 04:32:30] 2024-10-03 02:32:10,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 04:32:30] 2024-10-03 02:32:10,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 04:32:30] 2024-10-03 02:32:10,595 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-03 04:32:30] 2024-10-03 02:32:10,596 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 04:32:30] 2024-10-03 02:32:10,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 04:32:30] 2024-10-03 02:32:10,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 04:32:30] 2024-10-03 02:32:10,994 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-03 04:32:30] 2024-10-03 02:32:10,994 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-03 04:32:30] 2024-10-03 02:32:10,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 04:32:30] 2024-10-03 02:32:10,995 | INFO     | will abort loop
[2024-10-03 04:32:30] 2024-10-03 02:32:11,594 | INFO     | [job] retrieve thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:11,604 | INFO     | all data control threads have been joined
[2024-10-03 04:32:30] 2024-10-03 02:32:11,697 | INFO     | [data] copytool_in thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:11,941 | INFO     | all job control threads have been joined
[2024-10-03 04:32:30] 2024-10-03 02:32:11,999 | INFO     | [job] job monitor thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:12,042 | INFO     | all payload control threads have been joined
[2024-10-03 04:32:30] 2024-10-03 02:32:12,056 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:12,393 | INFO     | [payload] validate_post thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:12,407 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:12,416 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:12,596 | INFO     | [data] copytool_out thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:12,610 | INFO     | [data] control thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:12,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 04:32:30] 2024-10-03 02:32:12,871 | INFO     | [payload] failed_post thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:12,947 | INFO     | [job] control thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:13,048 | INFO     | [payload] control thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:13,070 | INFO     | [job] validate thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:13,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 04:32:30] 2024-10-03 02:32:14,371 | INFO     | [job] queue monitor thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:16,757 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:21,619 | INFO     | job.realtimelogging is not enabled
[2024-10-03 04:32:30] 2024-10-03 02:32:22,624 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 04:32:30] 2024-10-03 02:32:24,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139939255842624)>', '<ExcThread(monitor, started 139938691544832)>']
[2024-10-03 04:32:30] 2024-10-03 02:32:24,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 04:32:30] 2024-10-03 02:32:24,680 | INFO     | [monitor] control thread has ended
[2024-10-03 04:32:30] 2024-10-03 02:32:29,164 | INFO     | all workflow threads have been joined
[2024-10-03 04:32:30] 2024-10-03 02:32:29,165 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 04:32:30] 2024-10-03 02:32:29,165 | INFO     | traces error code: 0
[2024-10-03 04:32:30] 2024-10-03 02:32:29,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 04:32:30] 2024-10-03 02:32:29,534 [wrapper] ==== pilot stdout END ====
[2024-10-03 04:32:30] 2024-10-03 02:32:29,541 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 04:32:30] 2024-10-03 02:32:29,544 [wrapper] pilotpid: 31824
[2024-10-03 04:32:30] 2024-10-03 02:32:29,550 [wrapper] Pilot exit status: 0
[2024-10-03 04:32:30] 2024-10-03 02:32:29,795 [wrapper] pandaids: 6354078170
[2024-10-03 04:32:30] 2024-10-03 02:32:29,922 [wrapper] cleanup supervisor_pilot 31477 31825
[2024-10-03 04:32:30] 2024-10-03 02:32:29,978 [wrapper] Test setup, not cleaning
[2024-10-03 04:32:30] 2024-10-03 02:32:29,985 [wrapper] ==== wrapper stdout END ====
[2024-10-03 04:32:30] 2024-10-03 02:32:29,995 [wrapper] ==== wrapper stderr END ====
[2024-10-03 04:32:30] 2024-10-03 02:32:30,013 [wrapper] apfmon messages muted
[2024-10-03 04:32:30]  *** Error codes and diagnostics ***
[2024-10-03 04:32:30]     "exeErrorCode": 0,
[2024-10-03 04:32:30]     "exeErrorDiag": "",
[2024-10-03 04:32:30]     "pilotErrorCode": 0,
[2024-10-03 04:32:30]     "pilotErrorDiag": "",
[2024-10-03 04:32:30]  *** Listing of results directory ***
[2024-10-03 04:32:30] total 897092
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc    484599 Oct  2 14:18 pilot3.tar.gz
[2024-10-03 04:32:30] -rwx------. 1 boinc boinc     33814 Oct  2 14:22 runpilot2-wrapper.sh
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc      5653 Oct  2 14:23 queuedata.json
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc       100 Oct  2 21:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 04:32:30] -rwxr-xr-x. 1 boinc boinc      7986 Oct  2 21:59 run_atlas
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc       105 Oct  2 21:59 job.xml
[2024-10-03 04:32:30] -rw-r--r--. 2 boinc boinc 644560779 Oct  2 21:59 EVNT.41466530._000039.pool.root.1
[2024-10-03 04:32:30] -rw-r--r--. 2 boinc boinc     17537 Oct  2 21:59 start_atlas.sh
[2024-10-03 04:32:30] drwxrwx--x. 2 boinc boinc        68 Oct  2 21:59 shared
[2024-10-03 04:32:30] -rw-r--r--. 2 boinc boinc    498170 Oct  2 21:59 input.tar.gz
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc      6347 Oct  2 21:59 init_data.xml
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc         0 Oct  2 21:59 boinc_lockfile
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc      2535 Oct  2 21:59 pandaJob.out
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc       424 Oct  2 21:59 setup.sh.local
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc   1022881 Oct  2 22:00 agis_schedconf.cvmfs.json
[2024-10-03 04:32:30] drwx------. 4 boinc boinc      4096 Oct  2 22:00 pilot3
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc 264637241 Oct  3 04:31 HITS.41481181._001805.pool.root.1
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc       532 Oct  3 04:31 boinc_task_state.xml
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc      1018 Oct  3 04:31 memory_monitor_summary.json
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc   1615815 Oct  3 04:31 agis_ddmendpoints.agis.ALL.json
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc    509569 Oct  3 04:31 log.41481181._001805.job.log.tgz.1
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc        95 Oct  3 04:31 pilot_heartbeat.json
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc      7690 Oct  3 04:32 heartbeat.json
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc      8192 Oct  3 04:32 boinc_mmap_file
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc        28 Oct  3 04:32 wrapper_checkpoint.txt
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc      4655 Oct  3 04:32 pilotlog.txt
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc   2280121 Oct  3 04:32 log.41481181._001805.job.log.1
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc       357 Oct  3 04:32 output.list
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc       620 Oct  3 04:32 runtime_log
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc   2805760 Oct  3 04:32 result.tar.gz
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc     10999 Oct  3 04:32 runtime_log.err
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc       646 Oct  3 04:32 oXcMDm7XDG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmHenKDmo2RQBo.diag
[2024-10-03 04:32:30] -rw-r--r--. 1 boinc boinc     21523 Oct  3 04:32 stderr.txt
[2024-10-03 04:32:30] HITS file was successfully produced:
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc 264637241 Oct  3 04:31 shared/HITS.pool.root.1
[2024-10-03 04:32:30]  *** Contents of shared directory: ***
[2024-10-03 04:32:30] total 891140
[2024-10-03 04:32:30] -rw-r--r--. 2 boinc boinc 644560779 Oct  2 21:59 ATLAS.root_0
[2024-10-03 04:32:30] -rw-r--r--. 2 boinc boinc     17537 Oct  2 21:59 start_atlas.sh
[2024-10-03 04:32:30] -rw-r--r--. 2 boinc boinc    498170 Oct  2 21:59 input.tar.gz
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc 264637241 Oct  3 04:31 HITS.pool.root.1
[2024-10-03 04:32:30] -rw-------. 1 boinc boinc   2805760 Oct  3 04:32 result.tar.gz
04:32:32 (27399): run_atlas exited; CPU time 84456.551027
04:32:32 (27399): called boinc_finish(0)

</stderr_txt>
]]>

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