Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:22:03 (32241): wrapper (7.7.26015): starting
18:22:03 (32241): wrapper: running run_atlas (--nthreads 8)
[2024-10-02 18:22:03] Arguments: --nthreads 8
[2024-10-02 18:22:03] Threads: 8
[2024-10-02 18:22:03] Checking for CVMFS
[2024-10-02 18:22:04] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-02 18:22:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-02 18:22:04] Running cvmfs_config stat atlas.cern.ch
[2024-10-02 18:22:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-02 18:22:05] 2.11.2.0 3067 53075 79884 137897 1 198 20108474 25165824 4041 130560 0 37772073 99.952 18963266 8807 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-02 18:22:05] CVMFS is ok
[2024-10-02 18:22:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-02 18:22:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-02 18:22:05] Further information can be found at the LHC@home message board.
[2024-10-02 18:22:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-02 18:22:05] Checking for apptainer binary...
[2024-10-02 18:22:05] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-02 18:22:05] Running /usr/bin/apptainer --version
[2024-10-02 18:22:05] apptainer version 1.3.2-1.el7
[2024-10-02 18:22:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-02 18:22:07] cg-vwn489.simple-grid.lan
[2024-10-02 18:22:07] apptainer works
[2024-10-02 18:22:07] Set ATHENA_PROC_NUMBER=8
[2024-10-02 18:22:07] Set ATHENA_CORE_NUMBER=8
[2024-10-02 18:22:07] Starting ATLAS job with PandaID=6354075531
[2024-10-02 18:22:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 00:50:08]  *** The last 200 lines of the pilot log: ***
[2024-10-03 00:50:08] 2024-10-02 22:41:38,907 | INFO     | model: linear, x: [1727886234.0, 1727886295.0, 1727886356.0, 1727886417.0, 1727886478.0, 1727886539.0, 1727886600.0, 1727886661.0, 1727886722.0, 1727886783.0, 1727
[2024-10-03 00:50:08] 2024-10-02 22:41:38,908 | INFO     | sum of square deviations: 15078347830.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,911 | INFO     | sum of deviations: 146340655845.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,911 | INFO     | mean x: 1727897336.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,912 | INFO     | mean y: 2518862.821917808
[2024-10-03 00:50:08] 2024-10-02 22:41:38,912 | INFO     | -- intersect: -16767331006.271353
[2024-10-03 00:50:08] 2024-10-02 22:41:38,912 | INFO     | intersect: -16767331006.271353
[2024-10-03 00:50:08] 2024-10-02 22:41:38,912 | INFO     | chi2: 4.537062505011598
[2024-10-03 00:50:08] 2024-10-02 22:41:38,912 | INFO     | current chi2=4.537062505011598 (change=14.206184442961725 %)
[2024-10-03 00:50:08] 2024-10-02 22:41:38,912 | INFO     | right removable region: 364
[2024-10-03 00:50:08] 2024-10-02 22:41:38,913 | INFO     | model: linear, x: [1727886539.0, 1727886600.0, 1727886661.0, 1727886722.0, 1727886783.0, 1727886844.0, 1727886905.0, 1727886966.0, 1727887027.0, 1727887088.0, 1727
[2024-10-03 00:50:08] 2024-10-02 22:41:38,913 | INFO     | sum of square deviations: 15078347830.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,917 | INFO     | sum of deviations: 26296947378.00001
[2024-10-03 00:50:08] 2024-10-02 22:41:38,917 | INFO     | mean x: 1727897641.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,917 | INFO     | mean y: 2536776.6684931507
[2024-10-03 00:50:08] 2024-10-02 22:41:38,917 | INFO     | -- intersect: -3010952091.7566457
[2024-10-03 00:50:08] 2024-10-02 22:41:38,917 | INFO     | intersect: -3010952091.7566457
[2024-10-03 00:50:08] 2024-10-02 22:41:38,918 | INFO     | chi2: 2.64773892034547
[2024-10-03 00:50:08] 2024-10-02 22:41:38,918 | INFO     | current chi2=2.64773892034547 (change=49.93244542600141 %)
[2024-10-03 00:50:08] 2024-10-02 22:41:38,918 | INFO     | model: linear, x: [1727886844.0, 1727886905.0, 1727886966.0, 1727887027.0, 1727887088.0, 1727887149.0, 1727887210.0, 1727887271.0, 1727887332.0, 1727887393.0, 1727
[2024-10-03 00:50:08] 2024-10-02 22:41:38,919 | INFO     | sum of square deviations: 14467136370.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,922 | INFO     | sum of deviations: -44511108056.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,923 | INFO     | mean x: 1727897793.5
[2024-10-03 00:50:08] 2024-10-02 22:41:38,923 | INFO     | mean y: 2554443.7444444443
[2024-10-03 00:50:08] 2024-10-02 22:41:38,923 | INFO     | -- intersect: 5318785896.133974
[2024-10-03 00:50:08] 2024-10-02 22:41:38,923 | INFO     | intersect: 5318785896.133974
[2024-10-03 00:50:08] 2024-10-02 22:41:38,923 | INFO     | chi2: 1.3319915299137548
[2024-10-03 00:50:08] 2024-10-02 22:41:38,924 | INFO     | current chi2=1.3319915299137548 (change=49.69324506738149 %)
[2024-10-03 00:50:08] 2024-10-02 22:41:38,924 | INFO     | model: linear, x: [1727887149.0, 1727887210.0, 1727887271.0, 1727887332.0, 1727887393.0, 1727887454.0, 1727887515.0, 1727887576.0, 1727887637.0, 1727887698.0, 1727
[2024-10-03 00:50:08] 2024-10-02 22:41:38,924 | INFO     | sum of square deviations: 13872669410.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,928 | INFO     | sum of deviations: -72173985612.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,928 | INFO     | mean x: 1727897946.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,928 | INFO     | mean y: 2561498.295774648
[2024-10-03 00:50:08] 2024-10-02 22:41:38,928 | INFO     | -- intersect: 8992127803.661106
[2024-10-03 00:50:08] 2024-10-02 22:41:38,928 | INFO     | intersect: 8992127803.661106
[2024-10-03 00:50:08] 2024-10-02 22:41:38,929 | INFO     | chi2: 0.9826205447512297
[2024-10-03 00:50:08] 2024-10-02 22:41:38,929 | INFO     | current chi2=0.9826205447512297 (change=26.229219729734055 %)
[2024-10-03 00:50:08] 2024-10-02 22:41:38,929 | INFO     | model: linear, x: [1727887454.0, 1727887515.0, 1727887576.0, 1727887637.0, 1727887698.0, 1727887759.0, 1727887820.0, 1727887881.0, 1727887942.0, 1727888003.0, 1727
[2024-10-03 00:50:08] 2024-10-02 22:41:38,930 | INFO     | sum of square deviations: 13294714387.5
[2024-10-03 00:50:08] 2024-10-02 22:41:38,933 | INFO     | sum of deviations: -66513893151.000046
[2024-10-03 00:50:08] 2024-10-02 22:41:38,933 | INFO     | mean x: 1727898098.5
[2024-10-03 00:50:08] 2024-10-02 22:41:38,933 | INFO     | mean y: 2559994.1257142858
[2024-10-03 00:50:08] 2024-10-02 22:41:38,933 | INFO     | -- intersect: 8647290986.429264
[2024-10-03 00:50:08] 2024-10-02 22:41:38,934 | INFO     | intersect: 8647290986.429264
[2024-10-03 00:50:08] 2024-10-02 22:41:38,934 | INFO     | chi2: 0.969125180520278
[2024-10-03 00:50:08] 2024-10-02 22:41:38,934 | INFO     | current chi2=0.969125180520278 (change=1.3734054618579536 %)
[2024-10-03 00:50:08] 2024-10-02 22:41:38,934 | INFO     | left removable region: 40
[2024-10-03 00:50:08] 2024-10-02 22:41:38,935 | INFO     | model: linear, x: [1727888674.0, 1727888735.0, 1727888796.0, 1727888857.0, 1727888918.0, 1727888979.0, 1727889040.0, 1727889101.0, 1727889162.0, 1727889223.0, 1727
[2024-10-03 00:50:08] 2024-10-02 22:41:38,935 | INFO     | sum of square deviations: 10546523325.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,938 | INFO     | sum of deviations: 6020098479.0
[2024-10-03 00:50:08] 2024-10-02 22:41:38,938 | INFO     | mean x: 1727898525.5
[2024-10-03 00:50:08] 2024-10-02 22:41:38,938 | INFO     | mean y: 2552399.37654321
[2024-10-03 00:50:08] 2024-10-02 22:41:38,938 | INFO     | -- intersect: -983755501.7847044
[2024-10-03 00:50:08] 2024-10-02 22:41:38,938 | INFO     | intersect: -983755501.7847044
[2024-10-03 00:50:08] 2024-10-02 22:41:38,938 | INFO     | chi2: 0.03886837819646162
[2024-10-03 00:50:08] 2024-10-02 22:41:38,939 | INFO     | -- intersect: -983755501.7847044
[2024-10-03 00:50:08] 2024-10-02 22:41:38,939 | INFO     | current memory leak: 0.57 B/s (using 324 data points, chi2=0.04)
[2024-10-03 00:50:08] 2024-10-02 22:41:38,940 | INFO     | ..............................
[2024-10-03 00:50:08] 2024-10-02 22:41:38,940 | INFO     | . Timing measurements:
[2024-10-03 00:50:08] 2024-10-02 22:41:38,940 | INFO     | . get job = 0 s
[2024-10-03 00:50:08] 2024-10-02 22:41:38,940 | INFO     | . initial setup = 2 s
[2024-10-03 00:50:08] 2024-10-02 22:41:38,940 | INFO     | . payload setup = 10 s
[2024-10-03 00:50:08] 2024-10-02 22:41:38,940 | INFO     | . stage-in = 0 s
[2024-10-03 00:50:08] 2024-10-02 22:41:38,940 | INFO     | . payload execution = 22580 s
[2024-10-03 00:50:08] 2024-10-02 22:41:38,940 | INFO     | . stage-out = 4 s
[2024-10-03 00:50:08] 2024-10-02 22:41:38,940 | INFO     | . log creation = 1 s
[2024-10-03 00:50:08] 2024-10-02 22:41:38,940 | INFO     | ..............................
[2024-10-03 00:50:08] 2024-10-02 22:41:39,244 | INFO     | 
[2024-10-03 00:50:08] 2024-10-02 22:41:39,245 | INFO     | job summary report
[2024-10-03 00:50:08] 2024-10-02 22:41:39,245 | INFO     | --------------------------------------------------
[2024-10-03 00:50:08] 2024-10-02 22:41:39,245 | INFO     | PanDA job id: 6354075531
[2024-10-03 00:50:08] 2024-10-02 22:41:39,245 | INFO     | task id: 41481181
[2024-10-03 00:50:08] 2024-10-02 22:41:39,245 | INFO     | errors: (none)
[2024-10-03 00:50:08] 2024-10-02 22:41:39,245 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 00:50:08] 2024-10-02 22:41:39,245 | INFO     | pilot state: finished 
[2024-10-03 00:50:08] 2024-10-02 22:41:39,246 | INFO     | transexitcode: 0
[2024-10-03 00:50:08] 2024-10-02 22:41:39,246 | INFO     | exeerrorcode: 0
[2024-10-03 00:50:08] 2024-10-02 22:41:39,246 | INFO     | exeerrordiag: 
[2024-10-03 00:50:08] 2024-10-02 22:41:39,246 | INFO     | exitcode: 0
[2024-10-03 00:50:08] 2024-10-02 22:41:39,246 | INFO     | exitmsg: OK
[2024-10-03 00:50:08] 2024-10-02 22:41:39,246 | INFO     | cpuconsumptiontime: 83175 s
[2024-10-03 00:50:08] 2024-10-02 22:41:39,246 | INFO     | nevents: 400
[2024-10-03 00:50:08] 2024-10-02 22:41:39,246 | INFO     | neventsw: 0
[2024-10-03 00:50:08] 2024-10-02 22:41:39,246 | INFO     | pid: 13351
[2024-10-03 00:50:08] 2024-10-02 22:41:39,246 | INFO     | pgrp: 13351
[2024-10-03 00:50:08] 2024-10-02 22:41:39,246 | INFO     | corecount: 8
[2024-10-03 00:50:08] 2024-10-02 22:41:39,247 | INFO     | event service: False
[2024-10-03 00:50:08] 2024-10-02 22:41:39,247 | INFO     | sizes: {0: 2435432, 1: 2435432, 8: 2435666, 12: 2435694, 22594: 2469814, 22595: 2469813, 22599: 2479077, 22691: 2479191}
[2024-10-03 00:50:08] 2024-10-02 22:41:39,247 | INFO     | --------------------------------------------------
[2024-10-03 00:50:08] 2024-10-02 22:41:39,247 | INFO     | 
[2024-10-03 00:50:08] 2024-10-02 22:41:39,247 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2024-10-03 00:50:08] 2024-10-02 22:41:39,717 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,719 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,719 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,719 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,719 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 00:50:08] 2024-10-02 22:41:39,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,719 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 00:50:08] 2024-10-02 22:41:39,719 | INFO     | job 6354075531 has completed (purged errors)
[2024-10-03 00:50:08] 2024-10-02 22:41:39,719 | INFO     | overall cleanup function is called
[2024-10-03 00:50:08] 2024-10-02 22:41:40,729 | INFO     | --- collectZombieJob: --- 10, [13351]
[2024-10-03 00:50:08] 2024-10-02 22:41:40,730 | INFO     | zombie collector waiting for pid 13351
[2024-10-03 00:50:08] 2024-10-02 22:41:40,730 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 00:50:08] 2024-10-02 22:41:40,730 | INFO     | collected zombie processes
[2024-10-03 00:50:08] 2024-10-02 22:41:40,730 | INFO     | will  attempt to kill all subprocesses of pid=13351
[2024-10-03 00:50:08] 2024-10-02 22:41:40,987 | INFO     | process IDs to be killed: [13351] (in reverse order)
[2024-10-03 00:50:08] 2024-10-02 22:41:41,846 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 00:50:08] 2024-10-02 22:41:41,847 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 00:50:08] 2024-10-02 22:41:41,850 | INFO     | did not find any defunct processes belonging to 13351
[2024-10-03 00:50:08] 2024-10-02 22:41:41,854 | INFO     | did not find any defunct processes belonging to 13351
[2024-10-03 00:50:08] 2024-10-02 22:41:41,858 | INFO     | ready for new job
[2024-10-03 00:50:08] 2024-10-02 22:41:41,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 00:50:08] 2024-10-02 22:41:41,861 | INFO     | *************************************
[2024-10-03 00:50:08] 2024-10-02 22:41:41,861 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 00:50:08] 2024-10-02 22:41:41,861 | INFO     | *************************************
[2024-10-03 00:50:08] 2024-10-02 22:41:41,861 | INFO     | 
[2024-10-03 00:50:08] 2024-10-02 22:41:41,862 | INFO     | pilot is running in a VM
[2024-10-03 00:50:08] 2024-10-02 22:41:41,862 | INFO     | architecture information:
[2024-10-03 00:50:08] 2024-10-02 22:41:41,873 | INFO     | executing command: cat /etc/os-release
[2024-10-03 00:50:08] 2024-10-02 22:41:42,161 | INFO     | cat /etc/os-release:
[2024-10-03 00:50:08] NAME="CentOS Linux"
[2024-10-03 00:50:08] VERSION="7 (Core)"
[2024-10-03 00:50:08] ID="centos"
[2024-10-03 00:50:08] ID_LIKE="rhel fedora"
[2024-10-03 00:50:08] VERSION_ID="7"
[2024-10-03 00:50:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 00:50:08] ANSI_COLOR="0;31"
[2024-10-03 00:50:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 00:50:08] HOME_URL="https://www.centos.org/"
[2024-10-03 00:50:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 00:50:08] 
[2024-10-03 00:50:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 00:50:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 00:50:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 00:50:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 00:50:08] 
[2024-10-03 00:50:08] 2024-10-02 22:41:42,161 | INFO     | *************************************
[2024-10-03 00:50:08] 2024-10-02 22:41:42,665 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2024-10-03 00:50:08] 2024-10-02 22:41:42,691 | INFO     | sufficient remaining disk space (489075769344 B)
[2024-10-03 00:50:08] 2024-10-02 22:41:42,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 00:50:08] 2024-10-02 22:41:42,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 00:50:08] 2024-10-02 22:41:42,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 00:50:08] 2024-10-02 22:41:42,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 00:50:08] 2024-10-02 22:41:42,838 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 00:50:08] 2024-10-02 22:41:42,839 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 00:50:08] 2024-10-02 22:41:42,839 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 00:50:08] 2024-10-02 22:41:42,966 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-03 00:50:08] 2024-10-02 22:41:42,967 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-03 00:50:08] 2024-10-02 22:41:42,967 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 00:50:08] 2024-10-02 22:41:42,967 | INFO     | will abort loop
[2024-10-03 00:50:08] 2024-10-02 22:41:43,020 | INFO     | all data control threads have been joined
[2024-10-03 00:50:08] 2024-10-02 22:41:43,697 | INFO     | [job] retrieve thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:43,808 | INFO     | all job control threads have been joined
[2024-10-03 00:50:08] 2024-10-02 22:41:43,823 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:43,824 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:43,885 | INFO     | all payload control threads have been joined
[2024-10-03 00:50:08] 2024-10-02 22:41:43,900 | INFO     | [data] copytool_in thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:43,973 | INFO     | [job] job monitor thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:44,026 | INFO     | [data] control thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:44,075 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 00:50:08] 2024-10-02 22:41:44,398 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:44,438 | INFO     | [payload] validate_post thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:44,651 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:44,699 | INFO     | [data] copytool_out thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:44,741 | INFO     | [job] validate thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:44,814 | INFO     | [job] control thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:44,891 | INFO     | [payload] control thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:45,080 | INFO     | [job] queue monitor thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:45,122 | INFO     | [payload] failed_post thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:46,803 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 00:50:08] 2024-10-02 22:41:48,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896675608384)>', '<ExcThread(monitor, started 139896362604288)>']
[2024-10-03 00:50:08] 2024-10-02 22:41:48,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 00:50:08] 2024-10-02 22:41:48,876 | INFO     | [monitor] control thread has ended
[2024-10-03 00:50:08] 2024-10-02 22:41:53,138 | INFO     | all workflow threads have been joined
[2024-10-03 00:50:08] 2024-10-02 22:41:53,139 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 00:50:08] 2024-10-02 22:41:53,139 | INFO     | traces error code: 0
[2024-10-03 00:50:08] 2024-10-02 22:41:53,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 00:50:08] 2024-10-02 22:41:53,441 [wrapper] ==== pilot stdout END ====
[2024-10-03 00:50:08] 2024-10-02 22:41:53,542 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 00:50:08] 2024-10-02 22:41:53,623 [wrapper] pilotpid: 6662
[2024-10-03 00:50:08] 2024-10-02 22:41:53,718 [wrapper] Pilot exit status: 0
[2024-10-03 00:50:08] 2024-10-02 22:41:54,204 [wrapper] pandaids: 6354075531
[2024-10-03 00:50:08] 2024-10-02 22:41:54,990 [wrapper] cleanup supervisor_pilot 19469 6663
[2024-10-03 00:50:08] 2024-10-02 22:41:55,021 [wrapper] Test setup, not cleaning
[2024-10-03 00:50:08] 2024-10-02 22:41:55,066 [wrapper] ==== wrapper stdout END ====
[2024-10-03 00:50:08] 2024-10-02 22:41:55,101 [wrapper] ==== wrapper stderr END ====
[2024-10-03 00:50:08] 2024-10-02 22:41:55,179 [wrapper] apfmon messages muted
[2024-10-03 00:50:08]  *** Error codes and diagnostics ***
[2024-10-03 00:50:08]     "exeErrorCode": 0,
[2024-10-03 00:50:08]     "exeErrorDiag": "",
[2024-10-03 00:50:08]     "pilotErrorCode": 0,
[2024-10-03 00:50:08]     "pilotErrorDiag": "",
[2024-10-03 00:50:08]  *** Listing of results directory ***
[2024-10-03 00:50:08] total 888880
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc    484599 Oct  2 14:18 pilot3.tar.gz
[2024-10-03 00:50:08] -rwx------. 1 boinc boinc     33814 Oct  2 14:20 runpilot2-wrapper.sh
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc      5653 Oct  2 14:23 queuedata.json
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc       100 Oct  2 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 00:50:08] -rwxr-xr-x. 1 boinc boinc      7986 Oct  2 18:22 run_atlas
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc       105 Oct  2 18:22 job.xml
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc      6347 Oct  2 18:22 init_data.xml
[2024-10-03 00:50:08] -rw-r--r--. 2 boinc boinc 638228454 Oct  2 18:22 EVNT.41466530._000024.pool.root.1
[2024-10-03 00:50:08] -rw-r--r--. 2 boinc boinc     17537 Oct  2 18:22 start_atlas.sh
[2024-10-03 00:50:08] drwxrwx--x. 2 boinc boinc        68 Oct  2 18:22 shared
[2024-10-03 00:50:08] -rw-r--r--. 2 boinc boinc    498168 Oct  2 18:22 input.tar.gz
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc         0 Oct  2 18:22 boinc_lockfile
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc      2534 Oct  2 18:22 pandaJob.out
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc       424 Oct  2 18:22 setup.sh.local
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc   1022906 Oct  2 18:23 agis_schedconf.cvmfs.json
[2024-10-03 00:50:08] drwx------. 4 boinc boinc      4096 Oct  2 18:23 pilot3
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc 263118053 Oct  3 00:38 HITS.41481181._001281.pool.root.1
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc       532 Oct  3 00:38 boinc_task_state.xml
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc      1019 Oct  3 00:39 memory_monitor_summary.json
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc   1615815 Oct  3 00:40 agis_ddmendpoints.agis.ALL.json
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc    461135 Oct  3 00:40 log.41481181._001281.job.log.tgz.1
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc        95 Oct  3 00:40 pilot_heartbeat.json
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc      7688 Oct  3 00:41 heartbeat.json
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc      4460 Oct  3 00:41 pilotlog.txt
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc   2047238 Oct  3 00:41 log.41481181._001281.job.log.1
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc       357 Oct  3 00:41 output.list
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc       620 Oct  3 00:41 runtime_log
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc   2529280 Oct  3 00:41 result.tar.gz
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc     10999 Oct  3 00:41 runtime_log.err
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc       646 Oct  3 00:41 eWpMDmrWDG6n9Rq4apOajLDm4fhM0noT9bVorHsSDmSuaKDm7ELrWo.diag
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc      8192 Oct  3 00:50 boinc_mmap_file
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc        28 Oct  3 00:50 wrapper_checkpoint.txt
[2024-10-03 00:50:08] -rw-r--r--. 1 boinc boinc     21520 Oct  3 00:50 stderr.txt
[2024-10-03 00:50:08] HITS file was successfully produced:
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc 263118053 Oct  3 00:38 shared/HITS.pool.root.1
[2024-10-03 00:50:08]  *** Contents of shared directory: ***
[2024-10-03 00:50:08] total 883204
[2024-10-03 00:50:08] -rw-r--r--. 2 boinc boinc 638228454 Oct  2 18:22 ATLAS.root_0
[2024-10-03 00:50:08] -rw-r--r--. 2 boinc boinc     17537 Oct  2 18:22 start_atlas.sh
[2024-10-03 00:50:08] -rw-r--r--. 2 boinc boinc    498168 Oct  2 18:22 input.tar.gz
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc 263118053 Oct  3 00:38 HITS.pool.root.1
[2024-10-03 00:50:08] -rw-------. 1 boinc boinc   2529280 Oct  3 00:41 result.tar.gz
00:50:10 (32241): run_atlas exited; CPU time 83087.491726
00:50:10 (32241): called boinc_finish(0)

</stderr_txt>
]]>

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