Name xCjLDmsUDG6n9Rq4apOajLDm4fhM0noT9bVorHsSDm5qaKDm8WYL5n_0
Workunit 225776030
Created 2 Oct 2024, 12:23:40 UTC
Sent 2 Oct 2024, 12:27:33 UTC
Report deadline 10 Oct 2024, 12:27:33 UTC
Received 3 Oct 2024, 20:38:09 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10852123
Run time 6 hours 56 min 55 sec
CPU time 1 days 1 hours 24 min 51 sec
Validate state Valid
Credit 916.11
Device peak FLOPS 8.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.55 GB
Peak swap size 14.33 GB
Peak disk usage 1.45 GB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:09:59 (11321): wrapper (7.7.26015): starting
14:09:59 (11321): wrapper: running run_atlas (--nthreads 8)
[2024-10-03 14:09:59] Arguments: --nthreads 8
[2024-10-03 14:09:59] Threads: 8
[2024-10-03 14:09:59] Checking for CVMFS
[2024-10-03 14:09:59] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-03 14:10:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-03 14:10:00] Running cvmfs_config stat atlas.cern.ch
[2024-10-03 14:10:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-03 14:10:01] 2.11.2.0 7954 54262 76700 137926 0 61 24226335 25165824 3658 130560 0 36175933 99.930 20548468 9116 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-03 14:10:01] CVMFS is ok
[2024-10-03 14:10:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-03 14:10:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-03 14:10:01] Further information can be found at the LHC@home message board.
[2024-10-03 14:10:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-03 14:10:01] Checking for apptainer binary...
[2024-10-03 14:10:01] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-03 14:10:01] Running /usr/bin/apptainer --version
[2024-10-03 14:10:01] apptainer version 1.3.2-1.el7
[2024-10-03 14:10:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-03 14:10:06] cg-vwn319.simple-grid.lan
[2024-10-03 14:10:06] apptainer works
[2024-10-03 14:10:06] Set ATHENA_PROC_NUMBER=8
[2024-10-03 14:10:06] Set ATHENA_CORE_NUMBER=8
[2024-10-03 14:10:06] Starting ATLAS job with PandaID=6354103923
[2024-10-03 14:10:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 21:34:11]  *** The last 200 lines of the pilot log: ***
[2024-10-03 21:34:11] 2024-10-03 19:29:52,113 | INFO     | sum of square deviations: 22484544368.0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,118 | INFO     | sum of deviations: 210618256727.0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,118 | INFO     | mean x: 1727970740.0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,119 | INFO     | mean y: 2515387.282973621
[2024-10-03 21:34:11] 2024-10-03 19:29:52,119 | INFO     | -- intersect: -16183811494.751896
[2024-10-03 21:34:11] 2024-10-03 19:29:52,119 | INFO     | intersect: -16183811494.751896
[2024-10-03 21:34:11] 2024-10-03 19:29:52,119 | INFO     | chi2: 6.959823037479565
[2024-10-03 21:34:11] 2024-10-03 19:29:52,120 | INFO     | current chi2=6.959823037479565 (change=9.532038729289809 %)
[2024-10-03 21:34:11] 2024-10-03 19:29:52,120 | INFO     | right removable region: 416
[2024-10-03 21:34:11] 2024-10-03 19:29:52,120 | INFO     | model: linear, x: [1727958357.0, 1727958418.0, 1727958479.0, 1727958540.0, 1727958601.0, 1727958662.0, 1727958723.0, 1727958784.0, 1727958845.0, 1727958906.0, 1727
[2024-10-03 21:34:11] 2024-10-03 19:29:52,120 | INFO     | sum of square deviations: 22484544368.0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,126 | INFO     | sum of deviations: 47860601586.00005
[2024-10-03 21:34:11] 2024-10-03 19:29:52,126 | INFO     | mean x: 1727971045.0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,126 | INFO     | mean y: 2535962.8776978417
[2024-10-03 21:34:11] 2024-10-03 19:29:52,126 | INFO     | -- intersect: -3675623237.6525235
[2024-10-03 21:34:11] 2024-10-03 19:29:52,129 | INFO     | intersect: -3675623237.6525235
[2024-10-03 21:34:11] 2024-10-03 19:29:52,130 | INFO     | chi2: 3.742626659436504
[2024-10-03 21:34:11] 2024-10-03 19:29:52,130 | INFO     | current chi2=3.742626659436504 (change=51.351090127825216 %)
[2024-10-03 21:34:11] 2024-10-03 19:29:52,130 | INFO     | model: linear, x: [1727958662.0, 1727958723.0, 1727958784.0, 1727958845.0, 1727958906.0, 1727958967.0, 1727959028.0, 1727959089.0, 1727959150.0, 1727959211.0, 1727
[2024-10-03 21:34:11] 2024-10-03 19:29:52,131 | INFO     | sum of square deviations: 21685403803.0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,136 | INFO     | sum of deviations: -38867121974.0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,136 | INFO     | mean x: 1727971197.5
[2024-10-03 21:34:11] 2024-10-03 19:29:52,136 | INFO     | mean y: 2552506.8203883497
[2024-10-03 21:34:11] 2024-10-03 19:29:52,136 | INFO     | -- intersect: 3099624985.1986847
[2024-10-03 21:34:11] 2024-10-03 19:29:52,136 | INFO     | intersect: 3099624985.1986847
[2024-10-03 21:34:11] 2024-10-03 19:29:52,137 | INFO     | chi2: 2.1953647039539477
[2024-10-03 21:34:11] 2024-10-03 19:29:52,137 | INFO     | current chi2=2.1953647039539477 (change=41.34160567635979 %)
[2024-10-03 21:34:11] 2024-10-03 19:29:52,138 | INFO     | model: linear, x: [1727958967.0, 1727959028.0, 1727959089.0, 1727959150.0, 1727959211.0, 1727959272.0, 1727959333.0, 1727959394.0, 1727959455.0, 1727959516.0, 1727
[2024-10-03 21:34:11] 2024-10-03 19:29:52,138 | INFO     | sum of square deviations: 20905426388.0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,143 | INFO     | sum of deviations: -110329469081.00003
[2024-10-03 21:34:11] 2024-10-03 19:29:52,143 | INFO     | mean x: 1727971350.0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,143 | INFO     | mean y: 2566462.813267813
[2024-10-03 21:34:11] 2024-10-03 19:29:52,143 | INFO     | -- intersect: 9122024640.528906
[2024-10-03 21:34:11] 2024-10-03 19:29:52,143 | INFO     | intersect: 9122024640.528906
[2024-10-03 21:34:11] 2024-10-03 19:29:52,144 | INFO     | chi2: 1.0813942068358244
[2024-10-03 21:34:11] 2024-10-03 19:29:52,144 | INFO     | current chi2=1.0813942068358244 (change=50.741933452415154 %)
[2024-10-03 21:34:11] 2024-10-03 19:29:52,145 | INFO     | model: linear, x: [1727959272.0, 1727959333.0, 1727959394.0, 1727959455.0, 1727959516.0, 1727959577.0, 1727959638.0, 1727959699.0, 1727959760.0, 1727959821.0, 1727
[2024-10-03 21:34:11] 2024-10-03 19:29:52,145 | INFO     | sum of square deviations: 20144379560.5
[2024-10-03 21:34:11] 2024-10-03 19:29:52,150 | INFO     | sum of deviations: -116155372626.5
[2024-10-03 21:34:11] 2024-10-03 19:29:52,150 | INFO     | mean x: 1727971502.5
[2024-10-03 21:34:11] 2024-10-03 19:29:52,150 | INFO     | mean y: 2567612.614427861
[2024-10-03 21:34:11] 2024-10-03 19:29:52,150 | INFO     | -- intersect: 9966298347.435764
[2024-10-03 21:34:11] 2024-10-03 19:29:52,150 | INFO     | intersect: 9966298347.435764
[2024-10-03 21:34:11] 2024-10-03 19:29:52,151 | INFO     | chi2: 1.032015425077262
[2024-10-03 21:34:11] 2024-10-03 19:29:52,151 | INFO     | current chi2=1.032015425077262 (change=4.566214748185634 %)
[2024-10-03 21:34:11] 2024-10-03 19:29:52,151 | INFO     | left removable region: 40
[2024-10-03 21:34:11] 2024-10-03 19:29:52,152 | INFO     | model: linear, x: [1727960492.0, 1727960553.0, 1727960614.0, 1727960675.0, 1727960736.0, 1727960797.0, 1727960858.0, 1727960919.0, 1727960980.0, 1727961041.0, 1727
[2024-10-03 21:34:11] 2024-10-03 19:29:52,152 | INFO     | sum of square deviations: 16483099750.0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,156 | INFO     | sum of deviations: -38150100981.5
[2024-10-03 21:34:11] 2024-10-03 19:29:52,157 | INFO     | mean x: 1727971929.5
[2024-10-03 21:34:11] 2024-10-03 19:29:52,157 | INFO     | mean y: 2562560.098404255
[2024-10-03 21:34:11] 2024-10-03 19:29:52,157 | INFO     | -- intersect: 4001950090.5671444
[2024-10-03 21:34:11] 2024-10-03 19:29:52,157 | INFO     | intersect: 4001950090.5671444
[2024-10-03 21:34:11] 2024-10-03 19:29:52,157 | INFO     | chi2: 0.16974330360409284
[2024-10-03 21:34:11] 2024-10-03 19:29:52,158 | INFO     | -- intersect: 4001950090.5671444
[2024-10-03 21:34:11] 2024-10-03 19:29:52,158 | INFO     | current memory leak: -2.31 B/s (using 376 data points, chi2=0.17)
[2024-10-03 21:34:11] 2024-10-03 19:29:52,159 | INFO     | ..............................
[2024-10-03 21:34:11] 2024-10-03 19:29:52,159 | INFO     | . Timing measurements:
[2024-10-03 21:34:11] 2024-10-03 19:29:52,159 | INFO     | . get job = 0 s
[2024-10-03 21:34:11] 2024-10-03 19:29:52,159 | INFO     | . initial setup = 3 s
[2024-10-03 21:34:11] 2024-10-03 19:29:52,159 | INFO     | . payload setup = 118 s
[2024-10-03 21:34:11] 2024-10-03 19:29:52,159 | INFO     | . stage-in = 0 s
[2024-10-03 21:34:11] 2024-10-03 19:29:52,159 | INFO     | . payload execution = 25847 s
[2024-10-03 21:34:11] 2024-10-03 19:29:52,159 | INFO     | . stage-out = 4 s
[2024-10-03 21:34:11] 2024-10-03 19:29:52,159 | INFO     | . log creation = 2 s
[2024-10-03 21:34:11] 2024-10-03 19:29:52,159 | INFO     | ..............................
[2024-10-03 21:34:11] 2024-10-03 19:29:52,278 | INFO     | 
[2024-10-03 21:34:11] 2024-10-03 19:29:52,279 | INFO     | job summary report
[2024-10-03 21:34:11] 2024-10-03 19:29:52,279 | INFO     | --------------------------------------------------
[2024-10-03 21:34:11] 2024-10-03 19:29:52,279 | INFO     | PanDA job id: 6354103923
[2024-10-03 21:34:11] 2024-10-03 19:29:52,279 | INFO     | task id: 41481181
[2024-10-03 21:34:11] 2024-10-03 19:29:52,279 | INFO     | errors: (none)
[2024-10-03 21:34:11] 2024-10-03 19:29:52,279 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 21:34:11] 2024-10-03 19:29:52,279 | INFO     | pilot state: finished 
[2024-10-03 21:34:11] 2024-10-03 19:29:52,279 | INFO     | transexitcode: 0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,279 | INFO     | exeerrorcode: 0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,279 | INFO     | exeerrordiag: 
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | exitcode: 0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | exitmsg: OK
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | cpuconsumptiontime: 91517 s
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | nevents: 400
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | neventsw: 0
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | pid: 25509
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | pgrp: 25509
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | corecount: 8
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | event service: False
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | sizes: {0: 2435307, 1: 2435506, 2: 2435506, 12: 2435534, 23: 2435562, 34: 2435590, 45: 2435746, 55: 2435774, 66: 2435802, 77: 2435830, 88: 2435886, 91: 2436400, 98
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | --------------------------------------------------
[2024-10-03 21:34:11] 2024-10-03 19:29:52,280 | INFO     | 
[2024-10-03 21:34:11] 2024-10-03 19:29:52,281 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-03 21:34:11] 2024-10-03 19:29:52,754 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,755 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,755 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,755 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,756 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,756 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,756 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 21:34:11] 2024-10-03 19:29:52,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,756 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 21:34:11] 2024-10-03 19:29:52,757 | INFO     | job 6354103923 has completed (purged errors)
[2024-10-03 21:34:11] 2024-10-03 19:29:52,757 | INFO     | overall cleanup function is called
[2024-10-03 21:34:11] 2024-10-03 19:29:53,766 | INFO     | --- collectZombieJob: --- 10, [25509]
[2024-10-03 21:34:11] 2024-10-03 19:29:53,766 | INFO     | zombie collector waiting for pid 25509
[2024-10-03 21:34:11] 2024-10-03 19:29:53,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 21:34:11] 2024-10-03 19:29:53,766 | INFO     | collected zombie processes
[2024-10-03 21:34:11] 2024-10-03 19:29:53,766 | INFO     | will  attempt to kill all subprocesses of pid=25509
[2024-10-03 21:34:11] 2024-10-03 19:29:54,665 | INFO     | process IDs to be killed: [25509] (in reverse order)
[2024-10-03 21:34:11] 2024-10-03 19:29:55,440 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 21:34:11] 2024-10-03 19:29:55,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 21:34:11] 2024-10-03 19:29:55,444 | INFO     | did not find any defunct processes belonging to 25509
[2024-10-03 21:34:11] 2024-10-03 19:29:55,446 | INFO     | did not find any defunct processes belonging to 25509
[2024-10-03 21:34:11] 2024-10-03 19:29:55,447 | INFO     | ready for new job
[2024-10-03 21:34:11] 2024-10-03 19:29:55,447 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 21:34:11] 2024-10-03 19:29:55,449 | INFO     | *************************************
[2024-10-03 21:34:11] 2024-10-03 19:29:55,450 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 21:34:11] 2024-10-03 19:29:55,450 | INFO     | *************************************
[2024-10-03 21:34:11] 2024-10-03 19:29:55,450 | INFO     | 
[2024-10-03 21:34:11] 2024-10-03 19:29:55,450 | INFO     | pilot is running in a VM
[2024-10-03 21:34:11] 2024-10-03 19:29:55,451 | INFO     | architecture information:
[2024-10-03 21:34:11] 2024-10-03 19:29:55,451 | INFO     | executing command: cat /etc/os-release
[2024-10-03 21:34:11] 2024-10-03 19:29:55,635 | INFO     | cat /etc/os-release:
[2024-10-03 21:34:11] NAME="CentOS Linux"
[2024-10-03 21:34:11] VERSION="7 (Core)"
[2024-10-03 21:34:11] ID="centos"
[2024-10-03 21:34:11] ID_LIKE="rhel fedora"
[2024-10-03 21:34:11] VERSION_ID="7"
[2024-10-03 21:34:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 21:34:11] ANSI_COLOR="0;31"
[2024-10-03 21:34:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 21:34:11] HOME_URL="https://www.centos.org/"
[2024-10-03 21:34:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 21:34:11] 
[2024-10-03 21:34:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 21:34:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 21:34:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 21:34:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 21:34:11] 
[2024-10-03 21:34:11] 2024-10-03 19:29:55,635 | INFO     | *************************************
[2024-10-03 21:34:11] 2024-10-03 19:29:56,139 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-03 21:34:11] 2024-10-03 19:29:56,453 | INFO     | sufficient remaining disk space (488707719168 B)
[2024-10-03 21:34:11] 2024-10-03 19:29:56,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 21:34:11] 2024-10-03 19:29:56,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 21:34:11] 2024-10-03 19:29:56,456 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-03 21:34:11] 2024-10-03 19:29:56,456 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 21:34:11] 2024-10-03 19:29:56,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 21:34:11] 2024-10-03 19:29:56,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 21:34:11] 2024-10-03 19:29:56,545 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-03 21:34:11] 2024-10-03 19:29:56,545 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-03 21:34:11] 2024-10-03 19:29:56,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 21:34:11] 2024-10-03 19:29:56,545 | INFO     | will abort loop
[2024-10-03 21:34:11] 2024-10-03 19:29:56,634 | INFO     | all job control threads have been joined
[2024-10-03 21:34:11] 2024-10-03 19:29:56,669 | INFO     | all data control threads have been joined
[2024-10-03 21:34:11] 2024-10-03 19:29:56,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 21:34:11] 2024-10-03 19:29:57,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 21:34:11] 2024-10-03 19:29:57,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 21:34:11] 2024-10-03 19:29:57,459 | INFO     | [job] retrieve thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:57,551 | INFO     | [job] job monitor thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:57,639 | INFO     | [job] control thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:57,652 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:57,675 | INFO     | [data] control thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:57,764 | INFO     | [payload] validate_post thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:57,849 | INFO     | all payload control threads have been joined
[2024-10-03 21:34:11] 2024-10-03 19:29:57,884 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:58,096 | INFO     | [payload] failed_post thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:58,287 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:58,301 | INFO     | [job] queue monitor thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:58,332 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:58,540 | INFO     | [data] copytool_in thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:58,855 | INFO     | [payload] control thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:58,874 | INFO     | [data] copytool_out thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:29:58,907 | INFO     | [job] validate thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:30:01,316 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 21:34:11] 2024-10-03 19:30:02,987 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140406252287808)>', '<ExcThread(monitor, started 140405676951296)>']
[2024-10-03 21:34:11] 2024-10-03 19:30:03,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 21:34:11] 2024-10-03 19:30:03,500 | INFO     | [monitor] control thread has ended
[2024-10-03 21:34:11] 2024-10-03 19:30:08,014 | INFO     | all workflow threads have been joined
[2024-10-03 21:34:11] 2024-10-03 19:30:08,014 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 21:34:11] 2024-10-03 19:30:08,014 | INFO     | traces error code: 0
[2024-10-03 21:34:11] 2024-10-03 19:30:08,015 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 21:34:11] 2024-10-03 19:30:08,254 [wrapper] ==== pilot stdout END ====
[2024-10-03 21:34:11] 2024-10-03 19:30:08,399 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 21:34:11] 2024-10-03 19:30:08,523 [wrapper] pilotpid: 17107
[2024-10-03 21:34:11] 2024-10-03 19:30:08,591 [wrapper] Pilot exit status: 0
[2024-10-03 21:34:11] 2024-10-03 19:30:09,038 [wrapper] pandaids: 6354103923
[2024-10-03 21:34:11] 2024-10-03 19:30:10,042 [wrapper] cleanup supervisor_pilot 16036 17108
[2024-10-03 21:34:11] 2024-10-03 19:30:10,123 [wrapper] Test setup, not cleaning
[2024-10-03 21:34:11] 2024-10-03 19:30:10,174 [wrapper] ==== wrapper stdout END ====
[2024-10-03 21:34:11] 2024-10-03 19:30:10,260 [wrapper] ==== wrapper stderr END ====
[2024-10-03 21:34:11] 2024-10-03 19:30:10,409 [wrapper] apfmon messages muted
[2024-10-03 21:34:11]  *** Error codes and diagnostics ***
[2024-10-03 21:34:11]     "exeErrorCode": 0,
[2024-10-03 21:34:11]     "exeErrorDiag": "",
[2024-10-03 21:34:11]     "pilotErrorCode": 0,
[2024-10-03 21:34:11]     "pilotErrorDiag": "",
[2024-10-03 21:34:11]  *** Listing of results directory ***
[2024-10-03 21:34:11] total 890676
[2024-10-03 21:34:11] -rwx------. 1 boinc boinc     33814 Oct  2 14:18 runpilot2-wrapper.sh
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc    484599 Oct  2 14:18 pilot3.tar.gz
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc      5653 Oct  2 14:22 queuedata.json
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc       100 Oct  3 14:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 21:34:11] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 14:09 run_atlas
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc       105 Oct  3 14:09 job.xml
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc      6346 Oct  3 14:09 init_data.xml
[2024-10-03 21:34:11] -rw-r--r--. 2 boinc boinc 639319412 Oct  3 14:09 EVNT.41466530._000028.pool.root.1
[2024-10-03 21:34:11] -rw-r--r--. 2 boinc boinc     17537 Oct  3 14:09 start_atlas.sh
[2024-10-03 21:34:11] drwxrwx--x. 2 boinc boinc        68 Oct  3 14:09 shared
[2024-10-03 21:34:11] -rw-r--r--. 2 boinc boinc    498168 Oct  3 14:09 input.tar.gz
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc         0 Oct  3 14:09 boinc_lockfile
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc      2532 Oct  3 14:10 pandaJob.out
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc       424 Oct  3 14:10 setup.sh.local
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc   1024595 Oct  3 14:13 agis_schedconf.cvmfs.json
[2024-10-03 21:34:11] drwx------. 4 boinc boinc      4096 Oct  3 14:13 pilot3
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc 262908803 Oct  3 21:28 HITS.41481181._002478.pool.root.1
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc       532 Oct  3 21:28 boinc_task_state.xml
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc      1018 Oct  3 21:29 memory_monitor_summary.json
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc        95 Oct  3 21:29 pilot_heartbeat.json
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc   1615815 Oct  3 21:29 agis_ddmendpoints.agis.ALL.json
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc    516643 Oct  3 21:29 log.41481181._002478.job.log.tgz.1
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc      7690 Oct  3 21:29 heartbeat.json
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc      4583 Oct  3 21:30 pilotlog.txt
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc   2467053 Oct  3 21:30 log.41481181._002478.job.log.1
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc       357 Oct  3 21:30 output.list
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc       620 Oct  3 21:30 runtime_log
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc   3000320 Oct  3 21:30 result.tar.gz
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc       646 Oct  3 21:30 xCjLDmsUDG6n9Rq4apOajLDm4fhM0noT9bVorHsSDm5qaKDm8WYL5n.diag
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc     10999 Oct  3 21:30 runtime_log.err
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc      8192 Oct  3 21:34 boinc_mmap_file
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc        28 Oct  3 21:34 wrapper_checkpoint.txt
[2024-10-03 21:34:11] -rw-r--r--. 1 boinc boinc     21494 Oct  3 21:34 stderr.txt
[2024-10-03 21:34:11] HITS file was successfully produced:
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc 262908803 Oct  3 21:28 shared/HITS.pool.root.1
[2024-10-03 21:34:11]  *** Contents of shared directory: ***
[2024-10-03 21:34:11] total 884524
[2024-10-03 21:34:11] -rw-r--r--. 2 boinc boinc 639319412 Oct  3 14:09 ATLAS.root_0
[2024-10-03 21:34:11] -rw-r--r--. 2 boinc boinc     17537 Oct  3 14:09 start_atlas.sh
[2024-10-03 21:34:11] -rw-r--r--. 2 boinc boinc    498168 Oct  3 14:09 input.tar.gz
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc 262908803 Oct  3 21:28 HITS.pool.root.1
[2024-10-03 21:34:11] -rw-------. 1 boinc boinc   3000320 Oct  3 21:30 result.tar.gz
21:34:13 (11321): run_atlas exited; CPU time 91421.437750
21:34:13 (11321): called boinc_finish(0)

</stderr_txt>
]]>


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