Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:26:48 (19761): wrapper (7.7.26015): starting
14:26:48 (19761): wrapper: running run_atlas (--nthreads 8)
[2024-10-02 14:26:48] Arguments: --nthreads 8
[2024-10-02 14:26:48] Threads: 8
[2024-10-02 14:26:48] Checking for CVMFS
[2024-10-02 14:26:50] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-02 14:26:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-02 14:26:50] Running cvmfs_config stat atlas.cern.ch
[2024-10-02 14:26:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-02 14:26:52] 2.11.2.0 18731 83117 84296 137890 2 16 13285803 25165825 4087 130560 0 57144764 99.941 28941705 9247 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-02 14:26:52] CVMFS is ok
[2024-10-02 14:26:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-02 14:26:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-02 14:26:52] Further information can be found at the LHC@home message board.
[2024-10-02 14:26:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-02 14:26:52] Checking for apptainer binary...
[2024-10-02 14:26:52] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-02 14:26:52] Running /usr/bin/apptainer --version
[2024-10-02 14:26:52] apptainer version 1.3.2-1.el7
[2024-10-02 14:26:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-02 14:26:59] cg-vwn284.simple-grid.lan
[2024-10-02 14:26:59] apptainer works
[2024-10-02 14:26:59] Set ATHENA_PROC_NUMBER=8
[2024-10-02 14:26:59] Set ATHENA_CORE_NUMBER=8
[2024-10-02 14:26:59] Starting ATLAS job with PandaID=6354074910
[2024-10-02 14:26:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-02 22:42:28]  *** The last 200 lines of the pilot log: ***
[2024-10-02 22:42:28] 2024-10-02 19:36:35,085 | INFO     | model: linear, x: [1727873207.0, 1727873268.0, 1727873329.0, 1727873390.0, 1727873451.0, 1727873512.0, 1727873573.0, 1727873634.0, 1727873695.0, 1727873756.0, 1727
[2024-10-02 22:42:28] 2024-10-02 19:36:35,085 | INFO     | sum of square deviations: 19994421400.0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,090 | INFO     | sum of deviations: 189108857626.99997
[2024-10-02 22:42:28] 2024-10-02 19:36:35,090 | INFO     | mean x: 1727885407.0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,090 | INFO     | mean y: 2507980.152119701
[2024-10-02 22:42:28] 2024-10-02 19:36:35,090 | INFO     | -- intersect: -16339972199.251015
[2024-10-02 22:42:28] 2024-10-02 19:36:35,091 | INFO     | intersect: -16339972199.251015
[2024-10-02 22:42:28] 2024-10-02 19:36:35,091 | INFO     | chi2: 4.68078238756401
[2024-10-02 22:42:28] 2024-10-02 19:36:35,091 | INFO     | current chi2=4.68078238756401 (change=48.322094263139675 %)
[2024-10-02 22:42:28] 2024-10-02 19:36:35,092 | INFO     | model: linear, x: [1727873512.0, 1727873573.0, 1727873634.0, 1727873695.0, 1727873756.0, 1727873817.0, 1727873878.0, 1727873939.0, 1727874000.0, 1727874061.0, 1727
[2024-10-02 22:42:28] 2024-10-02 19:36:35,093 | INFO     | sum of square deviations: 19255784295.0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,098 | INFO     | sum of deviations: 94367685822.99998
[2024-10-02 22:42:28] 2024-10-02 19:36:35,098 | INFO     | mean x: 1727885559.5
[2024-10-02 22:42:28] 2024-10-02 19:36:35,098 | INFO     | mean y: 2527525.525252525
[2024-10-02 22:42:28] 2024-10-02 19:36:35,099 | INFO     | -- intersect: -8465398741.146429
[2024-10-02 22:42:28] 2024-10-02 19:36:35,099 | INFO     | intersect: -8465398741.146429
[2024-10-02 22:42:28] 2024-10-02 19:36:35,099 | INFO     | chi2: 2.685234475813402
[2024-10-02 22:42:28] 2024-10-02 19:36:35,099 | INFO     | current chi2=2.685234475813402 (change=42.632785430325 %)
[2024-10-02 22:42:28] 2024-10-02 19:36:35,100 | INFO     | model: linear, x: [1727873817.0, 1727873878.0, 1727873939.0, 1727874000.0, 1727874061.0, 1727874122.0, 1727874183.0, 1727874244.0, 1727874305.0, 1727874366.0, 1727
[2024-10-02 22:42:28] 2024-10-02 19:36:35,100 | INFO     | sum of square deviations: 18535566140.0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,105 | INFO     | sum of deviations: 17956875549.000004
[2024-10-02 22:42:28] 2024-10-02 19:36:35,105 | INFO     | mean x: 1727885712.0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,105 | INFO     | mean y: 2543704.8567774934
[2024-10-02 22:42:28] 2024-10-02 19:36:35,105 | INFO     | -- intersect: -1671396462.868753
[2024-10-02 22:42:28] 2024-10-02 19:36:35,105 | INFO     | intersect: -1671396462.868753
[2024-10-02 22:42:28] 2024-10-02 19:36:35,106 | INFO     | chi2: 1.4190021089318532
[2024-10-02 22:42:28] 2024-10-02 19:36:35,106 | INFO     | current chi2=1.4190021089318532 (change=47.155374261980825 %)
[2024-10-02 22:42:28] 2024-10-02 19:36:35,107 | INFO     | model: linear, x: [1727874122.0, 1727874183.0, 1727874244.0, 1727874305.0, 1727874366.0, 1727874427.0, 1727874488.0, 1727874549.0, 1727874610.0, 1727874671.0, 1727
[2024-10-02 22:42:28] 2024-10-02 19:36:35,107 | INFO     | sum of square deviations: 17833534372.5
[2024-10-02 22:42:28] 2024-10-02 19:36:35,112 | INFO     | sum of deviations: -25887799363.5
[2024-10-02 22:42:28] 2024-10-02 19:36:35,112 | INFO     | mean x: 1727885864.5
[2024-10-02 22:42:28] 2024-10-02 19:36:35,112 | INFO     | mean y: 2553195.494818653
[2024-10-02 22:42:28] 2024-10-02 19:36:35,112 | INFO     | -- intersect: 2510814409.9504867
[2024-10-02 22:42:28] 2024-10-02 19:36:35,112 | INFO     | intersect: 2510814409.9504867
[2024-10-02 22:42:28] 2024-10-02 19:36:35,113 | INFO     | chi2: 0.8871361365584097
[2024-10-02 22:42:28] 2024-10-02 19:36:35,114 | INFO     | current chi2=0.8871361365584097 (change=37.48169005709251 %)
[2024-10-02 22:42:28] 2024-10-02 19:36:35,114 | INFO     | model: linear, x: [1727874427.0, 1727874488.0, 1727874549.0, 1727874610.0, 1727874671.0, 1727874732.0, 1727874793.0, 1727874854.0, 1727874915.0, 1727874976.0, 1727
[2024-10-02 22:42:28] 2024-10-02 19:36:35,114 | INFO     | sum of square deviations: 17149456430.0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,119 | INFO     | sum of deviations: -30769456276.0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,120 | INFO     | mean x: 1727886017.0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,120 | INFO     | mean y: 2554274.0866141734
[2024-10-02 22:42:28] 2024-10-02 19:36:35,120 | INFO     | -- intersect: 3102717446.4299893
[2024-10-02 22:42:28] 2024-10-02 19:36:35,120 | INFO     | intersect: 3102717446.4299893
[2024-10-02 22:42:28] 2024-10-02 19:36:35,120 | INFO     | chi2: 0.8682081616799735
[2024-10-02 22:42:28] 2024-10-02 19:36:35,121 | INFO     | current chi2=0.8682081616799735 (change=2.133604313748975 %)
[2024-10-02 22:42:28] 2024-10-02 19:36:35,121 | INFO     | left removable region: 50
[2024-10-02 22:42:28] 2024-10-02 19:36:35,121 | INFO     | model: linear, x: [1727875952.0, 1727876013.0, 1727876074.0, 1727876135.0, 1727876196.0, 1727876257.0, 1727876318.0, 1727876379.0, 1727876440.0, 1727876501.0, 1727
[2024-10-02 22:42:28] 2024-10-02 19:36:35,121 | INFO     | sum of square deviations: 13294714387.5
[2024-10-02 22:42:28] 2024-10-02 19:36:35,125 | INFO     | sum of deviations: 14573012453.499996
[2024-10-02 22:42:28] 2024-10-02 19:36:35,126 | INFO     | mean x: 1727886596.5
[2024-10-02 22:42:28] 2024-10-02 19:36:35,126 | INFO     | mean y: 2555668.1228571427
[2024-10-02 22:42:28] 2024-10-02 19:36:35,126 | INFO     | -- intersect: -1891468690.3624613
[2024-10-02 22:42:28] 2024-10-02 19:36:35,126 | INFO     | intersect: -1891468690.3624613
[2024-10-02 22:42:28] 2024-10-02 19:36:35,126 | INFO     | chi2: 0.001792072901193649
[2024-10-02 22:42:28] 2024-10-02 19:36:35,127 | INFO     | -- intersect: -1891468690.3624613
[2024-10-02 22:42:28] 2024-10-02 19:36:35,127 | INFO     | current memory leak: 1.10 B/s (using 350 data points, chi2=0.00)
[2024-10-02 22:42:28] 2024-10-02 19:36:35,128 | INFO     | ..............................
[2024-10-02 22:42:28] 2024-10-02 19:36:35,128 | INFO     | . Timing measurements:
[2024-10-02 22:42:28] 2024-10-02 19:36:35,128 | INFO     | . get job = 0 s
[2024-10-02 22:42:28] 2024-10-02 19:36:35,128 | INFO     | . initial setup = 14 s
[2024-10-02 22:42:28] 2024-10-02 19:36:35,128 | INFO     | . payload setup = 138 s
[2024-10-02 22:42:28] 2024-10-02 19:36:35,128 | INFO     | . stage-in = 0 s
[2024-10-02 22:42:28] 2024-10-02 19:36:35,128 | INFO     | . payload execution = 24898 s
[2024-10-02 22:42:28] 2024-10-02 19:36:35,129 | INFO     | . stage-out = 4 s
[2024-10-02 22:42:28] 2024-10-02 19:36:35,129 | INFO     | . log creation = 2 s
[2024-10-02 22:42:28] 2024-10-02 19:36:35,129 | INFO     | ..............................
[2024-10-02 22:42:28] 2024-10-02 19:36:35,459 | INFO     | 
[2024-10-02 22:42:28] 2024-10-02 19:36:35,459 | INFO     | job summary report
[2024-10-02 22:42:28] 2024-10-02 19:36:35,459 | INFO     | --------------------------------------------------
[2024-10-02 22:42:28] 2024-10-02 19:36:35,459 | INFO     | PanDA job id: 6354074910
[2024-10-02 22:42:28] 2024-10-02 19:36:35,459 | INFO     | task id: 41481181
[2024-10-02 22:42:28] 2024-10-02 19:36:35,459 | INFO     | errors: (none)
[2024-10-02 22:42:28] 2024-10-02 19:36:35,460 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-02 22:42:28] 2024-10-02 19:36:35,460 | INFO     | pilot state: finished 
[2024-10-02 22:42:28] 2024-10-02 19:36:35,460 | INFO     | transexitcode: 0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,460 | INFO     | exeerrorcode: 0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,460 | INFO     | exeerrordiag: 
[2024-10-02 22:42:28] 2024-10-02 19:36:35,460 | INFO     | exitcode: 0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,460 | INFO     | exitmsg: OK
[2024-10-02 22:42:28] 2024-10-02 19:36:35,460 | INFO     | cpuconsumptiontime: 90235 s
[2024-10-02 22:42:28] 2024-10-02 19:36:35,460 | INFO     | nevents: 400
[2024-10-02 22:42:28] 2024-10-02 19:36:35,461 | INFO     | neventsw: 0
[2024-10-02 22:42:28] 2024-10-02 19:36:35,461 | INFO     | pid: 4506
[2024-10-02 22:42:28] 2024-10-02 19:36:35,461 | INFO     | pgrp: 4506
[2024-10-02 22:42:28] 2024-10-02 19:36:35,461 | INFO     | corecount: 8
[2024-10-02 22:42:28] 2024-10-02 19:36:35,461 | INFO     | event service: False
[2024-10-02 22:42:28] 2024-10-02 19:36:35,461 | INFO     | sizes: {0: 2433924, 1: 2435289, 2: 2435488, 3: 2435516, 14: 2435516, 24: 2435544, 35: 2435700, 46: 2435728, 57: 2435756, 68: 2435784, 79: 2435812, 90: 2436148, 101
[2024-10-02 22:42:28] 2024-10-02 19:36:35,461 | INFO     | --------------------------------------------------
[2024-10-02 22:42:28] 2024-10-02 19:36:35,461 | INFO     | 
[2024-10-02 22:42:28] 2024-10-02 19:36:35,461 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2024-10-02 22:42:28] 2024-10-02 19:36:35,889 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,890 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,890 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,890 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,891 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-02 22:42:28] 2024-10-02 19:36:35,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,891 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-02 22:42:28] 2024-10-02 19:36:35,891 | INFO     | job 6354074910 has completed (purged errors)
[2024-10-02 22:42:28] 2024-10-02 19:36:35,892 | INFO     | overall cleanup function is called
[2024-10-02 22:42:28] 2024-10-02 19:36:36,901 | INFO     | --- collectZombieJob: --- 10, [4506]
[2024-10-02 22:42:28] 2024-10-02 19:36:36,901 | INFO     | zombie collector waiting for pid 4506
[2024-10-02 22:42:28] 2024-10-02 19:36:36,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-02 22:42:28] 2024-10-02 19:36:36,901 | INFO     | collected zombie processes
[2024-10-02 22:42:28] 2024-10-02 19:36:36,901 | INFO     | will  attempt to kill all subprocesses of pid=4506
[2024-10-02 22:42:28] 2024-10-02 19:36:37,479 | INFO     | process IDs to be killed: [4506] (in reverse order)
[2024-10-02 22:42:28] 2024-10-02 19:36:38,026 | WARNING  | found no corresponding commands to process id(s)
[2024-10-02 22:42:28] 2024-10-02 19:36:38,027 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-02 22:42:28] 2024-10-02 19:36:38,030 | INFO     | did not find any defunct processes belonging to 4506
[2024-10-02 22:42:28] 2024-10-02 19:36:38,033 | INFO     | did not find any defunct processes belonging to 4506
[2024-10-02 22:42:28] 2024-10-02 19:36:38,033 | INFO     | ready for new job
[2024-10-02 22:42:28] 2024-10-02 19:36:38,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-02 22:42:28] 2024-10-02 19:36:38,036 | INFO     | *************************************
[2024-10-02 22:42:28] 2024-10-02 19:36:38,036 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-02 22:42:28] 2024-10-02 19:36:38,036 | INFO     | *************************************
[2024-10-02 22:42:28] 2024-10-02 19:36:38,036 | INFO     | 
[2024-10-02 22:42:28] 2024-10-02 19:36:38,037 | INFO     | pilot is running in a VM
[2024-10-02 22:42:28] 2024-10-02 19:36:38,037 | INFO     | architecture information:
[2024-10-02 22:42:28] 2024-10-02 19:36:38,038 | INFO     | executing command: cat /etc/os-release
[2024-10-02 22:42:28] 2024-10-02 19:36:38,252 | INFO     | cat /etc/os-release:
[2024-10-02 22:42:28] NAME="CentOS Linux"
[2024-10-02 22:42:28] VERSION="7 (Core)"
[2024-10-02 22:42:28] ID="centos"
[2024-10-02 22:42:28] ID_LIKE="rhel fedora"
[2024-10-02 22:42:28] VERSION_ID="7"
[2024-10-02 22:42:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-02 22:42:28] ANSI_COLOR="0;31"
[2024-10-02 22:42:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-02 22:42:28] HOME_URL="https://www.centos.org/"
[2024-10-02 22:42:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-02 22:42:28] 
[2024-10-02 22:42:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-02 22:42:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-02 22:42:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-02 22:42:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-02 22:42:28] 
[2024-10-02 22:42:28] 2024-10-02 19:36:38,252 | INFO     | *************************************
[2024-10-02 22:42:28] 2024-10-02 19:36:38,756 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2024-10-02 22:42:28] 2024-10-02 19:36:38,948 | INFO     | sufficient remaining disk space (486751076352 B)
[2024-10-02 22:42:28] 2024-10-02 19:36:38,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-02 22:42:28] 2024-10-02 19:36:38,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-02 22:42:28] 2024-10-02 19:36:38,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-02 22:42:28] 2024-10-02 19:36:38,958 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-02 22:42:28] 2024-10-02 19:36:38,958 | INFO     | found 0 job(s) in 20 queues
[2024-10-02 22:42:28] 2024-10-02 19:36:38,958 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-02 22:42:28] 2024-10-02 19:36:38,958 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-02 22:42:28] 2024-10-02 19:36:39,266 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-02 22:42:28] 2024-10-02 19:36:39,267 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-02 22:42:28] 2024-10-02 19:36:39,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-02 22:42:28] 2024-10-02 19:36:39,267 | INFO     | will abort loop
[2024-10-02 22:42:28] 2024-10-02 19:36:39,398 | INFO     | all data control threads have been joined
[2024-10-02 22:42:28] 2024-10-02 19:36:39,405 | INFO     | all job control threads have been joined
[2024-10-02 22:42:28] 2024-10-02 19:36:39,954 | INFO     | [job] retrieve thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:40,198 | INFO     | all payload control threads have been joined
[2024-10-02 22:42:28] 2024-10-02 19:36:40,273 | INFO     | [job] job monitor thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:40,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-02 22:42:28] 2024-10-02 19:36:40,341 | INFO     | [payload] validate_post thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:40,405 | INFO     | [data] control thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:40,412 | INFO     | [job] control thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:40,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-02 22:42:28] 2024-10-02 19:36:40,437 | INFO     | [job] validate thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:40,471 | INFO     | [data] copytool_in thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:40,793 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:40,831 | INFO     | [payload] validate_pre thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:40,956 | INFO     | [data] copytool_out thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:41,040 | INFO     | [job] create_data_payload thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:41,083 | INFO     | [payload] failed_post thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:41,204 | INFO     | [payload] control thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:41,252 | INFO     | [payload] execute_payloads thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:41,286 | INFO     | [job] queue monitor thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:44,439 | INFO     | [data] queue_monitor thread has finished
[2024-10-02 22:42:28] 2024-10-02 19:36:45,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140108370634560)>', '<ExcThread(monitor, started 140107780704000)>']
[2024-10-02 22:42:28] 2024-10-02 19:36:45,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-02 22:42:28] 2024-10-02 19:36:46,000 | INFO     | [monitor] control thread has ended
[2024-10-02 22:42:28] 2024-10-02 19:36:50,743 | INFO     | all workflow threads have been joined
[2024-10-02 22:42:28] 2024-10-02 19:36:50,743 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-02 22:42:28] 2024-10-02 19:36:50,743 | INFO     | traces error code: 0
[2024-10-02 22:42:28] 2024-10-02 19:36:50,743 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-02 22:42:28] 2024-10-02 19:36:51,064 [wrapper] ==== pilot stdout END ====
[2024-10-02 22:42:28] 2024-10-02 19:36:51,115 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-02 22:42:28] 2024-10-02 19:36:51,215 [wrapper] pilotpid: 24881
[2024-10-02 22:42:28] 2024-10-02 19:36:51,300 [wrapper] Pilot exit status: 0
[2024-10-02 22:42:28] 2024-10-02 19:36:51,836 [wrapper] pandaids: 6354074910
[2024-10-02 22:42:28] 2024-10-02 19:36:52,412 [wrapper] cleanup supervisor_pilot 23569 24882
[2024-10-02 22:42:28] 2024-10-02 19:36:52,516 [wrapper] Test setup, not cleaning
[2024-10-02 22:42:28] 2024-10-02 19:36:52,611 [wrapper] ==== wrapper stdout END ====
[2024-10-02 22:42:28] 2024-10-02 19:36:52,690 [wrapper] ==== wrapper stderr END ====
[2024-10-02 22:42:28] 2024-10-02 19:36:52,799 [wrapper] apfmon messages muted
[2024-10-02 22:42:28]  *** Error codes and diagnostics ***
[2024-10-02 22:42:28]     "exeErrorCode": 0,
[2024-10-02 22:42:28]     "exeErrorDiag": "",
[2024-10-02 22:42:28]     "pilotErrorCode": 0,
[2024-10-02 22:42:28]     "pilotErrorDiag": "",
[2024-10-02 22:42:28]  *** Listing of results directory ***
[2024-10-02 22:42:28] total 895528
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc    484599 Oct  2 14:18 pilot3.tar.gz
[2024-10-02 22:42:28] -rwx------. 1 boinc boinc     33814 Oct  2 14:20 runpilot2-wrapper.sh
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc      5653 Oct  2 14:22 queuedata.json
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc       100 Oct  2 14:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-02 22:42:28] -rwxr-xr-x. 1 boinc boinc      7986 Oct  2 14:26 run_atlas
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc       105 Oct  2 14:26 job.xml
[2024-10-02 22:42:28] -rw-r--r--. 2 boinc boinc 645363170 Oct  2 14:26 EVNT.41466530._000018.pool.root.1
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc      6346 Oct  2 14:26 init_data.xml
[2024-10-02 22:42:28] -rw-r--r--. 2 boinc boinc     17537 Oct  2 14:26 start_atlas.sh
[2024-10-02 22:42:28] drwxrwx--x. 2 boinc boinc        68 Oct  2 14:26 shared
[2024-10-02 22:42:28] -rw-r--r--. 2 boinc boinc    498160 Oct  2 14:26 input.tar.gz
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc         0 Oct  2 14:26 boinc_lockfile
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc      2534 Oct  2 14:26 pandaJob.out
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc       424 Oct  2 14:27 setup.sh.local
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc   1021547 Oct  2 14:32 agis_schedconf.cvmfs.json
[2024-10-02 22:42:28] drwx------. 4 boinc boinc      4096 Oct  2 14:33 pilot3
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc 261961004 Oct  2 21:32 HITS.41481181._001143.pool.root.1
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc       532 Oct  2 21:33 boinc_task_state.xml
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc      1020 Oct  2 21:34 memory_monitor_summary.json
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc   1615815 Oct  2 21:35 agis_ddmendpoints.agis.ALL.json
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc    505244 Oct  2 21:35 log.41481181._001143.job.log.tgz.1
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc        95 Oct  2 21:35 pilot_heartbeat.json
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc      7697 Oct  2 21:36 heartbeat.json
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc      4583 Oct  2 21:36 pilotlog.txt
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc   2416303 Oct  2 21:36 log.41481181._001143.job.log.1
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc       357 Oct  2 21:36 output.list
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc       620 Oct  2 21:36 runtime_log
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc   2938880 Oct  2 21:36 result.tar.gz
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc     10999 Oct  2 21:36 runtime_log.err
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc       646 Oct  2 21:36 eWMLDmpWDG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDm5YnKDmMlquun.diag
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc      8192 Oct  2 22:42 boinc_mmap_file
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc        28 Oct  2 22:42 wrapper_checkpoint.txt
[2024-10-02 22:42:28] -rw-r--r--. 1 boinc boinc     21634 Oct  2 22:42 stderr.txt
[2024-10-02 22:42:28] HITS file was successfully produced:
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc 261961004 Oct  2 21:32 shared/HITS.pool.root.1
[2024-10-02 22:42:28]  *** Contents of shared directory: ***
[2024-10-02 22:42:28] total 889444
[2024-10-02 22:42:28] -rw-r--r--. 2 boinc boinc 645363170 Oct  2 14:26 ATLAS.root_0
[2024-10-02 22:42:28] -rw-r--r--. 2 boinc boinc     17537 Oct  2 14:26 start_atlas.sh
[2024-10-02 22:42:28] -rw-r--r--. 2 boinc boinc    498160 Oct  2 14:26 input.tar.gz
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc 261961004 Oct  2 21:32 HITS.pool.root.1
[2024-10-02 22:42:28] -rw-------. 1 boinc boinc   2938880 Oct  2 21:36 result.tar.gz
22:42:30 (19761): run_atlas exited; CPU time 90142.063597
22:42:30 (19761): called boinc_finish(0)

</stderr_txt>
]]>

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