Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:30:04 (5738): wrapper (7.7.26015): starting
11:30:04 (5738): wrapper: running run_atlas (--nthreads 8)
[2024-10-02 11:30:04] Arguments: --nthreads 8
[2024-10-02 11:30:04] Threads: 8
[2024-10-02 11:30:04] Checking for CVMFS
[2024-10-02 11:30:06] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-02 11:30:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-02 11:30:06] Running cvmfs_config stat atlas.cern.ch
[2024-10-02 11:30:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-02 11:30:08] 2.11.2.0 23348 52663 79232 137884 3 16 16126126 25165824 4513 130560 0 35844585 99.952 19064944 9080 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-02 11:30:08] CVMFS is ok
[2024-10-02 11:30:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-02 11:30:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-02 11:30:08] Further information can be found at the LHC@home message board.
[2024-10-02 11:30:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-02 11:30:08] Checking for apptainer binary...
[2024-10-02 11:30:08] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-02 11:30:08] Running /usr/bin/apptainer --version
[2024-10-02 11:30:08] apptainer version 1.3.2-1.el7
[2024-10-02 11:30:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-02 11:30:23] cg-vwn419.simple-grid.lan
[2024-10-02 11:30:23] apptainer works
[2024-10-02 11:30:23] Set ATHENA_PROC_NUMBER=8
[2024-10-02 11:30:23] Set ATHENA_CORE_NUMBER=8
[2024-10-02 11:30:23] Starting ATLAS job with PandaID=6354020138
[2024-10-02 11:30:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-02 19:37:59]  *** The last 200 lines of the pilot log: ***
[2024-10-02 19:37:59] 2024-10-02 17:13:43,389 | INFO     | intersect: -23108211250.775085
[2024-10-02 19:37:59] 2024-10-02 17:13:43,390 | INFO     | chi2: 7.500346830203529
[2024-10-02 19:37:59] 2024-10-02 17:13:43,390 | INFO     | model: linear, x: [1727862489.0, 1727862550.0, 1727862611.0, 1727862672.0, 1727862733.0, 1727862794.0, 1727862855.0, 1727862916.0, 1727862977.0, 1727863038.0, 1727
[2024-10-02 19:37:59] 2024-10-02 17:13:43,391 | INFO     | sum of square deviations: 24826065480.0
[2024-10-02 19:37:59] 2024-10-02 17:13:43,396 | INFO     | sum of deviations: 369102982709.0001
[2024-10-02 19:37:59] 2024-10-02 17:13:43,397 | INFO     | mean x: 1727875604.0
[2024-10-02 19:37:59] 2024-10-02 17:13:43,397 | INFO     | mean y: 2488100.343387471
[2024-10-02 19:37:59] 2024-10-02 17:13:43,397 | INFO     | -- intersect: -25686803652.32282
[2024-10-02 19:37:59] 2024-10-02 17:13:43,397 | INFO     | intersect: -25686803652.32282
[2024-10-02 19:37:59] 2024-10-02 17:13:43,398 | INFO     | chi2: 6.743954154187705
[2024-10-02 19:37:59] 2024-10-02 17:13:43,398 | INFO     | current chi2=6.743954154187705 (change=10.084769319864893 %)
[2024-10-02 19:37:59] 2024-10-02 17:13:43,398 | INFO     | right removable region: 430
[2024-10-02 19:37:59] 2024-10-02 17:13:43,398 | INFO     | model: linear, x: [1727862794.0, 1727862855.0, 1727862916.0, 1727862977.0, 1727863038.0, 1727863099.0, 1727863160.0, 1727863221.0, 1727863282.0, 1727863343.0, 1727
[2024-10-02 19:37:59] 2024-10-02 17:13:43,399 | INFO     | sum of square deviations: 24826065480.0
[2024-10-02 19:37:59] 2024-10-02 17:13:43,404 | INFO     | sum of deviations: 202022015764.0
[2024-10-02 19:37:59] 2024-10-02 17:13:43,404 | INFO     | mean x: 1727875909.0
[2024-10-02 19:37:59] 2024-10-02 17:13:43,405 | INFO     | mean y: 2508430.2459396753
[2024-10-02 19:37:59] 2024-10-02 17:13:43,405 | INFO     | -- intersect: -14058075370.576044
[2024-10-02 19:37:59] 2024-10-02 17:13:43,405 | INFO     | intersect: -14058075370.576044
[2024-10-02 19:37:59] 2024-10-02 17:13:43,405 | INFO     | chi2: 3.534813777292545
[2024-10-02 19:37:59] 2024-10-02 17:13:43,406 | INFO     | current chi2=3.534813777292545 (change=52.871329055637496 %)
[2024-10-02 19:37:59] 2024-10-02 17:13:43,406 | INFO     | model: linear, x: [1727863099.0, 1727863160.0, 1727863221.0, 1727863282.0, 1727863343.0, 1727863404.0, 1727863465.0, 1727863526.0, 1727863587.0, 1727863648.0, 1727
[2024-10-02 19:37:59] 2024-10-02 17:13:43,406 | INFO     | sum of square deviations: 23972030862.5
[2024-10-02 19:37:59] 2024-10-02 17:13:43,412 | INFO     | sum of deviations: 110856396139.50005
[2024-10-02 19:37:59] 2024-10-02 17:13:43,412 | INFO     | mean x: 1727876061.5
[2024-10-02 19:37:59] 2024-10-02 17:13:43,412 | INFO     | mean y: 2524701.1619718308
[2024-10-02 19:37:59] 2024-10-02 17:13:43,412 | INFO     | -- intersect: -7987875204.973771
[2024-10-02 19:37:59] 2024-10-02 17:13:43,412 | INFO     | intersect: -7987875204.973771
[2024-10-02 19:37:59] 2024-10-02 17:13:43,413 | INFO     | chi2: 2.004996798377269
[2024-10-02 19:37:59] 2024-10-02 17:13:43,413 | INFO     | current chi2=2.004996798377269 (change=43.278573506268955 %)
[2024-10-02 19:37:59] 2024-10-02 17:13:43,414 | INFO     | model: linear, x: [1727863404.0, 1727863465.0, 1727863526.0, 1727863587.0, 1727863648.0, 1727863709.0, 1727863770.0, 1727863831.0, 1727863892.0, 1727863953.0, 1727
[2024-10-02 19:37:59] 2024-10-02 17:13:43,414 | INFO     | sum of square deviations: 23137810570.0
[2024-10-02 19:37:59] 2024-10-02 17:13:43,419 | INFO     | sum of deviations: 32456070652.000008
[2024-10-02 19:37:59] 2024-10-02 17:13:43,420 | INFO     | mean x: 1727876214.0
[2024-10-02 19:37:59] 2024-10-02 17:13:43,420 | INFO     | mean y: 2539028.3871733965
[2024-10-02 19:37:59] 2024-10-02 17:13:43,420 | INFO     | -- intersect: -2421202505.403692
[2024-10-02 19:37:59] 2024-10-02 17:13:43,420 | INFO     | intersect: -2421202505.403692
[2024-10-02 19:37:59] 2024-10-02 17:13:43,421 | INFO     | chi2: 0.8798005902210999
[2024-10-02 19:37:59] 2024-10-02 17:13:43,421 | INFO     | current chi2=0.8798005902210999 (change=56.119601241599945 %)
[2024-10-02 19:37:59] 2024-10-02 17:13:43,421 | INFO     | model: linear, x: [1727863709.0, 1727863770.0, 1727863831.0, 1727863892.0, 1727863953.0, 1727864014.0, 1727864075.0, 1727864136.0, 1727864197.0, 1727864258.0, 1727
[2024-10-02 19:37:59] 2024-10-02 17:13:43,422 | INFO     | sum of square deviations: 22323172040.0
[2024-10-02 19:37:59] 2024-10-02 17:13:43,427 | INFO     | sum of deviations: 15376770840.500008
[2024-10-02 19:37:59] 2024-10-02 17:13:43,427 | INFO     | mean x: 1727876366.5
[2024-10-02 19:37:59] 2024-10-02 17:13:43,427 | INFO     | mean y: 2542212.987980769
[2024-10-02 19:37:59] 2024-10-02 17:13:43,427 | INFO     | -- intersect: -1187663143.1674118
[2024-10-02 19:37:59] 2024-10-02 17:13:43,427 | INFO     | intersect: -1187663143.1674118
[2024-10-02 19:37:59] 2024-10-02 17:13:43,428 | INFO     | chi2: 0.8096025488749099
[2024-10-02 19:37:59] 2024-10-02 17:13:43,428 | INFO     | current chi2=0.8096025488749099 (change=7.978858178368436 %)
[2024-10-02 19:37:59] 2024-10-02 17:13:43,428 | INFO     | left removable region: 40
[2024-10-02 19:37:59] 2024-10-02 17:13:43,429 | INFO     | model: linear, x: [1727864929.0, 1727864990.0, 1727865051.0, 1727865112.0, 1727865173.0, 1727865234.0, 1727865295.0, 1727865356.0, 1727865417.0, 1727865478.0, 1727
[2024-10-02 19:37:59] 2024-10-02 17:13:43,429 | INFO     | sum of square deviations: 18393712317.5
[2024-10-02 19:37:59] 2024-10-02 17:13:43,434 | INFO     | sum of deviations: 27037666809.5
[2024-10-02 19:37:59] 2024-10-02 17:13:43,434 | INFO     | mean x: 1727876793.5
[2024-10-02 19:37:59] 2024-10-02 17:13:43,434 | INFO     | mean y: 2550766.269230769
[2024-10-02 19:37:59] 2024-10-02 17:13:43,434 | INFO     | -- intersect: -2537325699.3462715
[2024-10-02 19:37:59] 2024-10-02 17:13:43,434 | INFO     | intersect: -2537325699.3462715
[2024-10-02 19:37:59] 2024-10-02 17:13:43,435 | INFO     | chi2: 0.002316736973696704
[2024-10-02 19:37:59] 2024-10-02 17:13:43,435 | INFO     | -- intersect: -2537325699.3462715
[2024-10-02 19:37:59] 2024-10-02 17:13:43,435 | INFO     | current memory leak: 1.47 B/s (using 390 data points, chi2=0.00)
[2024-10-02 19:37:59] 2024-10-02 17:13:43,436 | INFO     | ..............................
[2024-10-02 19:37:59] 2024-10-02 17:13:43,436 | INFO     | . Timing measurements:
[2024-10-02 19:37:59] 2024-10-02 17:13:43,436 | INFO     | . get job = 0 s
[2024-10-02 19:37:59] 2024-10-02 17:13:43,437 | INFO     | . initial setup = 19 s
[2024-10-02 19:37:59] 2024-10-02 17:13:43,437 | INFO     | . payload setup = 220 s
[2024-10-02 19:37:59] 2024-10-02 17:13:43,437 | INFO     | . stage-in = 0 s
[2024-10-02 19:37:59] 2024-10-02 17:13:43,437 | INFO     | . payload execution = 26763 s
[2024-10-02 19:37:59] 2024-10-02 17:13:43,437 | INFO     | . stage-out = 4 s
[2024-10-02 19:37:59] 2024-10-02 17:13:43,437 | INFO     | . log creation = 1 s
[2024-10-02 19:37:59] 2024-10-02 17:13:43,437 | INFO     | ..............................
[2024-10-02 19:37:59] 2024-10-02 17:13:44,105 | INFO     | 
[2024-10-02 19:37:59] 2024-10-02 17:13:44,105 | INFO     | job summary report
[2024-10-02 19:37:59] 2024-10-02 17:13:44,105 | INFO     | --------------------------------------------------
[2024-10-02 19:37:59] 2024-10-02 17:13:44,105 | INFO     | PanDA job id: 6354020138
[2024-10-02 19:37:59] 2024-10-02 17:13:44,105 | INFO     | task id: 41481181
[2024-10-02 19:37:59] 2024-10-02 17:13:44,105 | INFO     | errors: (none)
[2024-10-02 19:37:59] 2024-10-02 17:13:44,106 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-02 19:37:59] 2024-10-02 17:13:44,106 | INFO     | pilot state: finished 
[2024-10-02 19:37:59] 2024-10-02 17:13:44,106 | INFO     | transexitcode: 0
[2024-10-02 19:37:59] 2024-10-02 17:13:44,106 | INFO     | exeerrorcode: 0
[2024-10-02 19:37:59] 2024-10-02 17:13:44,106 | INFO     | exeerrordiag: 
[2024-10-02 19:37:59] 2024-10-02 17:13:44,106 | INFO     | exitcode: 0
[2024-10-02 19:37:59] 2024-10-02 17:13:44,106 | INFO     | exitmsg: OK
[2024-10-02 19:37:59] 2024-10-02 17:13:44,106 | INFO     | cpuconsumptiontime: 98022 s
[2024-10-02 19:37:59] 2024-10-02 17:13:44,106 | INFO     | nevents: 400
[2024-10-02 19:37:59] 2024-10-02 17:13:44,107 | INFO     | neventsw: 0
[2024-10-02 19:37:59] 2024-10-02 17:13:44,107 | INFO     | pid: 23636
[2024-10-02 19:37:59] 2024-10-02 17:13:44,107 | INFO     | pgrp: 23636
[2024-10-02 19:37:59] 2024-10-02 17:13:44,107 | INFO     | corecount: 8
[2024-10-02 19:37:59] 2024-10-02 17:13:44,107 | INFO     | event service: False
[2024-10-02 19:37:59] 2024-10-02 17:13:44,107 | INFO     | sizes: {0: 2433929, 1: 2435294, 2: 2435493, 3: 2435493, 14: 2435521, 25: 2435549, 36: 2435705, 46: 2435733, 57: 2435761, 68: 2435789, 79: 2435817, 90: 2436153, 101
[2024-10-02 19:37:59] 2024-10-02 17:13:44,107 | INFO     | --------------------------------------------------
[2024-10-02 19:37:59] 2024-10-02 17:13:44,107 | INFO     | 
[2024-10-02 19:37:59] 2024-10-02 17:13:44,108 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2024-10-02 19:37:59] 2024-10-02 17:13:44,231 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,232 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,232 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,232 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,234 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-02 19:37:59] 2024-10-02 17:13:44,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,234 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-02 19:37:59] 2024-10-02 17:13:44,234 | INFO     | job 6354020138 has completed (purged errors)
[2024-10-02 19:37:59] 2024-10-02 17:13:44,234 | INFO     | overall cleanup function is called
[2024-10-02 19:37:59] 2024-10-02 17:13:45,243 | INFO     | --- collectZombieJob: --- 10, [23636]
[2024-10-02 19:37:59] 2024-10-02 17:13:45,244 | INFO     | zombie collector waiting for pid 23636
[2024-10-02 19:37:59] 2024-10-02 17:13:45,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-02 19:37:59] 2024-10-02 17:13:45,244 | INFO     | collected zombie processes
[2024-10-02 19:37:59] 2024-10-02 17:13:45,244 | INFO     | will  attempt to kill all subprocesses of pid=23636
[2024-10-02 19:37:59] 2024-10-02 17:13:45,336 | INFO     | process IDs to be killed: [23636] (in reverse order)
[2024-10-02 19:37:59] 2024-10-02 17:13:46,119 | WARNING  | found no corresponding commands to process id(s)
[2024-10-02 19:37:59] 2024-10-02 17:13:46,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-02 19:37:59] 2024-10-02 17:13:46,123 | INFO     | did not find any defunct processes belonging to 23636
[2024-10-02 19:37:59] 2024-10-02 17:13:46,128 | INFO     | did not find any defunct processes belonging to 23636
[2024-10-02 19:37:59] 2024-10-02 17:13:46,128 | INFO     | ready for new job
[2024-10-02 19:37:59] 2024-10-02 17:13:46,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-02 19:37:59] 2024-10-02 17:13:46,138 | INFO     | *************************************
[2024-10-02 19:37:59] 2024-10-02 17:13:46,138 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-02 19:37:59] 2024-10-02 17:13:46,138 | INFO     | *************************************
[2024-10-02 19:37:59] 2024-10-02 17:13:46,139 | INFO     | 
[2024-10-02 19:37:59] 2024-10-02 17:13:46,139 | INFO     | pilot is running in a VM
[2024-10-02 19:37:59] 2024-10-02 17:13:46,139 | INFO     | architecture information:
[2024-10-02 19:37:59] 2024-10-02 17:13:46,152 | INFO     | executing command: cat /etc/os-release
[2024-10-02 19:37:59] 2024-10-02 17:13:46,429 | INFO     | cat /etc/os-release:
[2024-10-02 19:37:59] NAME="CentOS Linux"
[2024-10-02 19:37:59] VERSION="7 (Core)"
[2024-10-02 19:37:59] ID="centos"
[2024-10-02 19:37:59] ID_LIKE="rhel fedora"
[2024-10-02 19:37:59] VERSION_ID="7"
[2024-10-02 19:37:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-02 19:37:59] ANSI_COLOR="0;31"
[2024-10-02 19:37:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-02 19:37:59] HOME_URL="https://www.centos.org/"
[2024-10-02 19:37:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-02 19:37:59] 
[2024-10-02 19:37:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-02 19:37:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-02 19:37:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-02 19:37:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-02 19:37:59] 
[2024-10-02 19:37:59] 2024-10-02 17:13:46,430 | INFO     | *************************************
[2024-10-02 19:37:59] 2024-10-02 17:13:46,933 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2024-10-02 19:37:59] 2024-10-02 17:13:47,191 | INFO     | sufficient remaining disk space (487939112960 B)
[2024-10-02 19:37:59] 2024-10-02 17:13:47,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-02 19:37:59] 2024-10-02 17:13:47,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-02 19:37:59] 2024-10-02 17:13:47,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-02 19:37:59] 2024-10-02 17:13:47,193 | INFO     | aborting loop
[2024-10-02 19:37:59] 2024-10-02 17:13:47,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-02 19:37:59] 2024-10-02 17:13:47,293 | INFO     | all job control threads have been joined
[2024-10-02 19:37:59] 2024-10-02 17:13:47,489 | INFO     | found 0 job(s) in 20 queues
[2024-10-02 19:37:59] 2024-10-02 17:13:47,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-02 19:37:59] 2024-10-02 17:13:47,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-02 19:37:59] 2024-10-02 17:13:47,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-02 19:37:59] 2024-10-02 17:13:47,515 | INFO     | all data control threads have been joined
[2024-10-02 19:37:59] 2024-10-02 17:13:47,584 | INFO     | all payload control threads have been joined
[2024-10-02 19:37:59] 2024-10-02 17:13:48,198 | INFO     | [job] retrieve thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:48,199 | INFO     | [job] job monitor thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:48,298 | INFO     | [job] control thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:48,340 | INFO     | [payload] validate_pre thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:48,521 | INFO     | [data] control thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:48,590 | INFO     | [payload] control thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:48,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-02 19:37:59] 2024-10-02 17:13:48,966 | INFO     | [data] copytool_in thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:49,061 | INFO     | [job] validate thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:49,082 | INFO     | [payload] failed_post thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:49,188 | INFO     | [payload] execute_payloads thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:49,291 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:49,388 | INFO     | [job] create_data_payload thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:49,502 | INFO     | [data] copytool_out thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:49,526 | INFO     | [payload] validate_post thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:49,671 | INFO     | [job] queue monitor thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:51,210 | INFO     | [data] queue_monitor thread has finished
[2024-10-02 19:37:59] 2024-10-02 17:13:53,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916815476544)>', '<ExcThread(monitor, started 139915857745664)>']
[2024-10-02 19:37:59] 2024-10-02 17:13:53,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-02 19:37:59] 2024-10-02 17:13:53,525 | INFO     | [monitor] control thread has ended
[2024-10-02 19:37:59] 2024-10-02 17:13:58,280 | INFO     | all workflow threads have been joined
[2024-10-02 19:37:59] 2024-10-02 17:13:58,280 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-02 19:37:59] 2024-10-02 17:13:58,280 | INFO     | traces error code: 0
[2024-10-02 19:37:59] 2024-10-02 17:13:58,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-02 19:37:59] 2024-10-02 17:13:58,751 [wrapper] ==== pilot stdout END ====
[2024-10-02 19:37:59] 2024-10-02 17:13:58,859 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-02 19:37:59] 2024-10-02 17:13:58,928 [wrapper] pilotpid: 12793
[2024-10-02 19:37:59] 2024-10-02 17:13:58,977 [wrapper] Pilot exit status: 0
[2024-10-02 19:37:59] 2024-10-02 17:13:59,384 [wrapper] pandaids: 6354020138
[2024-10-02 19:37:59] 2024-10-02 17:13:59,959 [wrapper] cleanup supervisor_pilot 17463 12794
[2024-10-02 19:37:59] 2024-10-02 17:14:00,086 [wrapper] Test setup, not cleaning
[2024-10-02 19:37:59] 2024-10-02 17:14:00,196 [wrapper] ==== wrapper stdout END ====
[2024-10-02 19:37:59] 2024-10-02 17:14:00,310 [wrapper] ==== wrapper stderr END ====
[2024-10-02 19:37:59] 2024-10-02 17:14:00,495 [wrapper] apfmon messages muted
[2024-10-02 19:37:59]  *** Error codes and diagnostics ***
[2024-10-02 19:37:59]     "exeErrorCode": 0,
[2024-10-02 19:37:59]     "exeErrorDiag": "",
[2024-10-02 19:37:59]     "pilotErrorCode": 0,
[2024-10-02 19:37:59]     "pilotErrorDiag": "",
[2024-10-02 19:37:59]  *** Listing of results directory ***
[2024-10-02 19:37:59] total 891924
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc    484599 Oct  2 10:55 pilot3.tar.gz
[2024-10-02 19:37:59] -rwx------. 1 boinc boinc     33814 Oct  2 10:58 runpilot2-wrapper.sh
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc      5653 Oct  2 11:00 queuedata.json
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc       100 Oct  2 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-02 19:37:59] -rwxr-xr-x. 1 boinc boinc      7986 Oct  2 11:29 run_atlas
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc       105 Oct  2 11:29 job.xml
[2024-10-02 19:37:59] -rw-r--r--. 2 boinc boinc 637420758 Oct  2 11:30 EVNT.41466530._000020.pool.root.1
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc      6347 Oct  2 11:30 init_data.xml
[2024-10-02 19:37:59] -rw-r--r--. 2 boinc boinc     17537 Oct  2 11:30 start_atlas.sh
[2024-10-02 19:37:59] drwxrwx--x. 2 boinc boinc        68 Oct  2 11:30 shared
[2024-10-02 19:37:59] -rw-r--r--. 2 boinc boinc    498161 Oct  2 11:30 input.tar.gz
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc         0 Oct  2 11:30 boinc_lockfile
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc      2540 Oct  2 11:30 pandaJob.out
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc       424 Oct  2 11:31 setup.sh.local
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc   1021559 Oct  2 11:36 agis_schedconf.cvmfs.json
[2024-10-02 19:37:59] drwx------. 4 boinc boinc      4096 Oct  2 11:36 pilot3
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc 265233366 Oct  2 19:09 HITS.41481181._000535.pool.root.1
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc       532 Oct  2 19:10 boinc_task_state.xml
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc      1017 Oct  2 19:11 memory_monitor_summary.json
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc   1615815 Oct  2 19:12 agis_ddmendpoints.agis.ALL.json
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc    549592 Oct  2 19:12 log.41481181._000535.job.log.tgz.1
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc        95 Oct  2 19:13 pilot_heartbeat.json
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc      7696 Oct  2 19:13 heartbeat.json
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc      4274 Oct  2 19:13 pilotlog.txt
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc   2857297 Oct  2 19:14 log.41481181._000535.job.log.1
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc       357 Oct  2 19:14 output.list
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc       620 Oct  2 19:14 runtime_log
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc   3430400 Oct  2 19:14 result.tar.gz
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc       646 Oct  2 19:14 zQZKDmLNAG6n7OlckoGmwREmGgkVDo1bjSoqOlfODmMAsKDmcTfWtn.diag
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc     10999 Oct  2 19:14 runtime_log.err
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc      8192 Oct  2 19:37 boinc_mmap_file
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc        28 Oct  2 19:37 wrapper_checkpoint.txt
[2024-10-02 19:37:59] -rw-r--r--. 1 boinc boinc     21530 Oct  2 19:37 stderr.txt
[2024-10-02 19:37:59] HITS file was successfully produced:
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc 265233366 Oct  2 19:09 shared/HITS.pool.root.1
[2024-10-02 19:37:59]  *** Contents of shared directory: ***
[2024-10-02 19:37:59] total 885364
[2024-10-02 19:37:59] -rw-r--r--. 2 boinc boinc 637420758 Oct  2 11:30 ATLAS.root_0
[2024-10-02 19:37:59] -rw-r--r--. 2 boinc boinc     17537 Oct  2 11:30 start_atlas.sh
[2024-10-02 19:37:59] -rw-r--r--. 2 boinc boinc    498161 Oct  2 11:30 input.tar.gz
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc 265233366 Oct  2 19:09 HITS.pool.root.1
[2024-10-02 19:37:59] -rw-------. 1 boinc boinc   3430400 Oct  2 19:14 result.tar.gz
19:38:01 (5738): run_atlas exited; CPU time 97896.223456
19:38:01 (5738): called boinc_finish(0)

</stderr_txt>
]]>

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