Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:37:44 (18002): wrapper (7.7.26015): starting
16:37:44 (18002): wrapper: running run_atlas (--nthreads 8)
[2024-10-03 16:37:44] Arguments: --nthreads 8
[2024-10-03 16:37:44] Threads: 8
[2024-10-03 16:37:44] Checking for CVMFS
[2024-10-03 16:37:45] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-03 16:37:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-03 16:37:45] Running cvmfs_config stat atlas.cern.ch
[2024-10-03 16:37:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-03 16:37:46] 2.11.2.0 2476 54368 77844 137930 1 59 19555178 25165825 4519 130560 0 35584740 99.941 19903534 8631 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-03 16:37:46] CVMFS is ok
[2024-10-03 16:37:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-03 16:37:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-03 16:37:46] Further information can be found at the LHC@home message board.
[2024-10-03 16:37:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-03 16:37:46] Checking for apptainer binary...
[2024-10-03 16:37:46] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-03 16:37:46] Running /usr/bin/apptainer --version
[2024-10-03 16:37:46] apptainer version 1.3.2-1.el7
[2024-10-03 16:37:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-03 16:37:54] cg-vwn255.simple-grid.lan
[2024-10-03 16:37:54] apptainer works
[2024-10-03 16:37:54] Set ATHENA_PROC_NUMBER=8
[2024-10-03 16:37:54] Set ATHENA_CORE_NUMBER=8
[2024-10-03 16:37:55] Starting ATLAS job with PandaID=6354020602
[2024-10-03 16:37:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 23:25:12]  *** The last 200 lines of the pilot log: ***
[2024-10-03 23:25:12] 2024-10-03 21:22:49,643 | INFO     | intersect: -20072688590.700794
[2024-10-03 23:25:12] 2024-10-03 21:22:49,643 | INFO     | chi2: 4.916028658340561
[2024-10-03 23:25:12] 2024-10-03 21:22:49,644 | INFO     | model: linear, x: [1727966574.0, 1727966635.0, 1727966696.0, 1727966757.0, 1727966818.0, 1727966879.0, 1727966940.0, 1727967001.0, 1727967062.0, 1727967123.0, 1727
[2024-10-03 23:25:12] 2024-10-03 21:22:49,644 | INFO     | sum of square deviations: 17972496978.0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,649 | INFO     | sum of deviations: 240436658525.99997
[2024-10-03 23:25:12] 2024-10-03 21:22:49,649 | INFO     | mean x: 1727978347.0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,649 | INFO     | mean y: 2498555.0284237727
[2024-10-03 23:25:12] 2024-10-03 21:22:49,649 | INFO     | -- intersect: -23114452877.29252
[2024-10-03 23:25:12] 2024-10-03 21:22:49,650 | INFO     | intersect: -23114452877.29252
[2024-10-03 23:25:12] 2024-10-03 21:22:49,650 | INFO     | chi2: 4.150886934488035
[2024-10-03 23:25:12] 2024-10-03 21:22:49,650 | INFO     | current chi2=4.150886934488035 (change=15.564224235234711 %)
[2024-10-03 23:25:12] 2024-10-03 21:22:49,650 | INFO     | right removable region: 386
[2024-10-03 23:25:12] 2024-10-03 21:22:49,651 | INFO     | model: linear, x: [1727966879.0, 1727966940.0, 1727967001.0, 1727967062.0, 1727967123.0, 1727967184.0, 1727967245.0, 1727967306.0, 1727967367.0, 1727967428.0, 1727
[2024-10-03 23:25:12] 2024-10-03 21:22:49,651 | INFO     | sum of square deviations: 17972496978.0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,661 | INFO     | sum of deviations: 115798418286.00003
[2024-10-03 23:25:12] 2024-10-03 21:22:49,662 | INFO     | mean x: 1727978652.0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,662 | INFO     | mean y: 2515382.0645994833
[2024-10-03 23:25:12] 2024-10-03 21:22:49,662 | INFO     | -- intersect: -11131006853.521917
[2024-10-03 23:25:12] 2024-10-03 21:22:49,662 | INFO     | intersect: -11131006853.521917
[2024-10-03 23:25:12] 2024-10-03 21:22:49,663 | INFO     | chi2: 2.392672901550503
[2024-10-03 23:25:12] 2024-10-03 21:22:49,663 | INFO     | current chi2=2.392672901550503 (change=51.32915066532249 %)
[2024-10-03 23:25:12] 2024-10-03 21:22:49,663 | INFO     | model: linear, x: [1727967184.0, 1727967245.0, 1727967306.0, 1727967367.0, 1727967428.0, 1727967489.0, 1727967550.0, 1727967611.0, 1727967672.0, 1727967733.0, 1727
[2024-10-03 23:25:12] 2024-10-03 21:22:49,664 | INFO     | sum of square deviations: 17284846875.5
[2024-10-03 23:25:12] 2024-10-03 21:22:49,675 | INFO     | sum of deviations: 41994799099.5
[2024-10-03 23:25:12] 2024-10-03 21:22:49,676 | INFO     | mean x: 1727978804.5
[2024-10-03 23:25:12] 2024-10-03 21:22:49,676 | INFO     | mean y: 2531749.5366492146
[2024-10-03 23:25:12] 2024-10-03 21:22:49,676 | INFO     | -- intersect: -4195719080.560598
[2024-10-03 23:25:12] 2024-10-03 21:22:49,676 | INFO     | intersect: -4195719080.560598
[2024-10-03 23:25:12] 2024-10-03 21:22:49,677 | INFO     | chi2: 1.1751416278673499
[2024-10-03 23:25:12] 2024-10-03 21:22:49,677 | INFO     | current chi2=1.1751416278673499 (change=50.88582199824167 %)
[2024-10-03 23:25:12] 2024-10-03 21:22:49,678 | INFO     | model: linear, x: [1727967489.0, 1727967550.0, 1727967611.0, 1727967672.0, 1727967733.0, 1727967794.0, 1727967855.0, 1727967916.0, 1727967977.0, 1727968038.0, 1727
[2024-10-03 23:25:12] 2024-10-03 21:22:49,678 | INFO     | sum of square deviations: 16614964548.0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,689 | INFO     | sum of deviations: 7159692732.0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,690 | INFO     | mean x: 1727978957.0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,690 | INFO     | mean y: 2539653.9442970823
[2024-10-03 23:25:12] 2024-10-03 21:22:49,690 | INFO     | -- intersect: -742078147.9017547
[2024-10-03 23:25:12] 2024-10-03 21:22:49,690 | INFO     | intersect: -742078147.9017547
[2024-10-03 23:25:12] 2024-10-03 21:22:49,691 | INFO     | chi2: 0.8246764698684554
[2024-10-03 23:25:12] 2024-10-03 21:22:49,691 | INFO     | current chi2=0.8246764698684554 (change=29.823227233888357 %)
[2024-10-03 23:25:12] 2024-10-03 21:22:49,691 | INFO     | model: linear, x: [1727967794.0, 1727967855.0, 1727967916.0, 1727967977.0, 1727968038.0, 1727968099.0, 1727968160.0, 1727968221.0, 1727968282.0, 1727968343.0, 1727
[2024-10-03 23:25:12] 2024-10-03 21:22:49,691 | INFO     | sum of square deviations: 15962617433.0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,696 | INFO     | sum of deviations: -2220122785.5
[2024-10-03 23:25:12] 2024-10-03 21:22:49,696 | INFO     | mean x: 1727979109.5
[2024-10-03 23:25:12] 2024-10-03 21:22:49,696 | INFO     | mean y: 2541833.5349462368
[2024-10-03 23:25:12] 2024-10-03 21:22:49,696 | INFO     | -- intersect: 242873709.5553536
[2024-10-03 23:25:12] 2024-10-03 21:22:49,696 | INFO     | intersect: 242873709.5553536
[2024-10-03 23:25:12] 2024-10-03 21:22:49,697 | INFO     | chi2: 0.7896928434971254
[2024-10-03 23:25:12] 2024-10-03 21:22:49,697 | INFO     | current chi2=0.7896928434971254 (change=4.242103133718641 %)
[2024-10-03 23:25:12] 2024-10-03 21:22:49,697 | INFO     | left removable region: 40
[2024-10-03 23:25:12] 2024-10-03 21:22:49,698 | INFO     | model: linear, x: [1727969014.0, 1727969075.0, 1727969136.0, 1727969197.0, 1727969258.0, 1727969319.0, 1727969380.0, 1727969441.0, 1727969502.0, 1727969563.0, 1727
[2024-10-03 23:25:12] 2024-10-03 21:22:49,698 | INFO     | sum of square deviations: 12844082682.5
[2024-10-03 23:25:12] 2024-10-03 21:22:49,718 | INFO     | sum of deviations: 19866307583.5
[2024-10-03 23:25:12] 2024-10-03 21:22:49,719 | INFO     | mean x: 1727979536.5
[2024-10-03 23:25:12] 2024-10-03 21:22:49,719 | INFO     | mean y: 2548468.24566474
[2024-10-03 23:25:12] 2024-10-03 21:22:49,719 | INFO     | -- intersect: -2670166572.5003185
[2024-10-03 23:25:12] 2024-10-03 21:22:49,719 | INFO     | intersect: -2670166572.5003185
[2024-10-03 23:25:12] 2024-10-03 21:22:49,720 | INFO     | chi2: 0.0011339872204912656
[2024-10-03 23:25:12] 2024-10-03 21:22:49,720 | INFO     | -- intersect: -2670166572.5003185
[2024-10-03 23:25:12] 2024-10-03 21:22:49,720 | INFO     | current memory leak: 1.55 B/s (using 346 data points, chi2=0.00)
[2024-10-03 23:25:12] 2024-10-03 21:22:49,721 | INFO     | ..............................
[2024-10-03 23:25:12] 2024-10-03 21:22:49,721 | INFO     | . Timing measurements:
[2024-10-03 23:25:12] 2024-10-03 21:22:49,721 | INFO     | . get job = 0 s
[2024-10-03 23:25:12] 2024-10-03 21:22:49,721 | INFO     | . initial setup = 6 s
[2024-10-03 23:25:12] 2024-10-03 21:22:49,721 | INFO     | . payload setup = 12 s
[2024-10-03 23:25:12] 2024-10-03 21:22:49,722 | INFO     | . stage-in = 0 s
[2024-10-03 23:25:12] 2024-10-03 21:22:49,722 | INFO     | . payload execution = 23921 s
[2024-10-03 23:25:12] 2024-10-03 21:22:49,722 | INFO     | . stage-out = 4 s
[2024-10-03 23:25:12] 2024-10-03 21:22:49,722 | INFO     | . log creation = 1 s
[2024-10-03 23:25:12] 2024-10-03 21:22:49,722 | INFO     | ..............................
[2024-10-03 23:25:12] 2024-10-03 21:22:49,889 | INFO     | 
[2024-10-03 23:25:12] 2024-10-03 21:22:49,889 | INFO     | job summary report
[2024-10-03 23:25:12] 2024-10-03 21:22:49,889 | INFO     | --------------------------------------------------
[2024-10-03 23:25:12] 2024-10-03 21:22:49,889 | INFO     | PanDA job id: 6354020602
[2024-10-03 23:25:12] 2024-10-03 21:22:49,889 | INFO     | task id: 41481181
[2024-10-03 23:25:12] 2024-10-03 21:22:49,889 | INFO     | errors: (none)
[2024-10-03 23:25:12] 2024-10-03 21:22:49,889 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | pilot state: finished 
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | transexitcode: 0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | exeerrorcode: 0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | exeerrordiag: 
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | exitcode: 0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | exitmsg: OK
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | cpuconsumptiontime: 88658 s
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | nevents: 400
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | neventsw: 0
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | pid: 31435
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | pgrp: 31435
[2024-10-03 23:25:12] 2024-10-03 21:22:49,890 | INFO     | corecount: 8
[2024-10-03 23:25:12] 2024-10-03 21:22:49,891 | INFO     | event service: False
[2024-10-03 23:25:12] 2024-10-03 21:22:49,891 | INFO     | sizes: {0: 2435258, 1: 2435457, 2: 2435457, 12: 2435485, 23: 2435513, 34: 2435541, 44: 2435697, 52: 2435931, 55: 2435959, 23938: 2470693, 23943: 2479717, 23944: 24
[2024-10-03 23:25:12] 2024-10-03 21:22:49,891 | INFO     | --------------------------------------------------
[2024-10-03 23:25:12] 2024-10-03 21:22:49,891 | INFO     | 
[2024-10-03 23:25:12] 2024-10-03 21:22:49,891 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2024-10-03 23:25:12] 2024-10-03 21:22:50,146 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,147 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,147 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,147 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,147 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,147 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,147 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,148 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,148 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,148 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,148 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,148 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,148 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,148 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 23:25:12] 2024-10-03 21:22:50,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,148 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 23:25:12] 2024-10-03 21:22:50,149 | INFO     | job 6354020602 has completed (purged errors)
[2024-10-03 23:25:12] 2024-10-03 21:22:50,149 | INFO     | overall cleanup function is called
[2024-10-03 23:25:12] 2024-10-03 21:22:51,158 | INFO     | --- collectZombieJob: --- 10, [31435]
[2024-10-03 23:25:12] 2024-10-03 21:22:51,158 | INFO     | zombie collector waiting for pid 31435
[2024-10-03 23:25:12] 2024-10-03 21:22:51,158 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 23:25:12] 2024-10-03 21:22:51,158 | INFO     | collected zombie processes
[2024-10-03 23:25:12] 2024-10-03 21:22:51,158 | INFO     | will  attempt to kill all subprocesses of pid=31435
[2024-10-03 23:25:12] 2024-10-03 21:22:51,842 | INFO     | process IDs to be killed: [31435] (in reverse order)
[2024-10-03 23:25:12] 2024-10-03 21:22:51,910 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 23:25:12] 2024-10-03 21:22:51,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 23:25:12] 2024-10-03 21:22:51,914 | INFO     | did not find any defunct processes belonging to 31435
[2024-10-03 23:25:12] 2024-10-03 21:22:51,918 | INFO     | did not find any defunct processes belonging to 31435
[2024-10-03 23:25:12] 2024-10-03 21:22:51,918 | INFO     | ready for new job
[2024-10-03 23:25:12] 2024-10-03 21:22:51,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 23:25:12] 2024-10-03 21:22:51,921 | INFO     | *************************************
[2024-10-03 23:25:12] 2024-10-03 21:22:51,921 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 23:25:12] 2024-10-03 21:22:51,921 | INFO     | *************************************
[2024-10-03 23:25:12] 2024-10-03 21:22:51,921 | INFO     | 
[2024-10-03 23:25:12] 2024-10-03 21:22:51,922 | INFO     | pilot is running in a VM
[2024-10-03 23:25:12] 2024-10-03 21:22:51,922 | INFO     | architecture information:
[2024-10-03 23:25:12] 2024-10-03 21:22:51,922 | INFO     | executing command: cat /etc/os-release
[2024-10-03 23:25:12] 2024-10-03 21:22:52,104 | INFO     | cat /etc/os-release:
[2024-10-03 23:25:12] NAME="CentOS Linux"
[2024-10-03 23:25:12] VERSION="7 (Core)"
[2024-10-03 23:25:12] ID="centos"
[2024-10-03 23:25:12] ID_LIKE="rhel fedora"
[2024-10-03 23:25:12] VERSION_ID="7"
[2024-10-03 23:25:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 23:25:12] ANSI_COLOR="0;31"
[2024-10-03 23:25:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 23:25:12] HOME_URL="https://www.centos.org/"
[2024-10-03 23:25:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 23:25:12] 
[2024-10-03 23:25:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 23:25:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 23:25:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 23:25:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 23:25:12] 
[2024-10-03 23:25:12] 2024-10-03 21:22:52,105 | INFO     | *************************************
[2024-10-03 23:25:12] 2024-10-03 21:22:52,607 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2024-10-03 23:25:12] 2024-10-03 21:22:52,879 | INFO     | sufficient remaining disk space (489280241664 B)
[2024-10-03 23:25:12] 2024-10-03 21:22:52,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 23:25:12] 2024-10-03 21:22:52,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 23:25:12] 2024-10-03 21:22:52,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 23:25:12] 2024-10-03 21:22:52,881 | INFO     | aborting loop
[2024-10-03 23:25:12] 2024-10-03 21:22:52,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 23:25:12] 2024-10-03 21:22:53,152 | INFO     | all data control threads have been joined
[2024-10-03 23:25:12] 2024-10-03 21:22:53,542 | INFO     | all job control threads have been joined
[2024-10-03 23:25:12] 2024-10-03 21:22:53,883 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 23:25:12] 2024-10-03 21:22:53,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 23:25:12] 2024-10-03 21:22:53,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 23:25:12] 2024-10-03 21:22:53,887 | INFO     | [job] job monitor thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:53,888 | INFO     | [job] retrieve thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:53,914 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:53,971 | INFO     | all payload control threads have been joined
[2024-10-03 23:25:12] 2024-10-03 21:22:54,003 | INFO     | [data] copytool_in thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:54,158 | INFO     | [data] control thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:54,215 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:54,396 | INFO     | [payload] validate_post thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:54,496 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:54,546 | INFO     | [job] validate thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:54,548 | INFO     | [job] control thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:54,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 23:25:12] 2024-10-03 21:22:54,890 | INFO     | [data] copytool_out thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:54,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 23:25:12] 2024-10-03 21:22:54,977 | INFO     | [payload] control thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:55,106 | INFO     | [payload] failed_post thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:55,235 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:55,909 | INFO     | [job] queue monitor thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:22:58,736 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 23:25:12] 2024-10-03 21:23:00,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516606195520)>', '<ExcThread(monitor, started 140515819382528)>']
[2024-10-03 23:25:12] 2024-10-03 21:23:00,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 23:25:12] 2024-10-03 21:23:00,925 | INFO     | [monitor] control thread has ended
[2024-10-03 23:25:12] 2024-10-03 21:23:05,338 | INFO     | all workflow threads have been joined
[2024-10-03 23:25:12] 2024-10-03 21:23:05,338 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 23:25:12] 2024-10-03 21:23:05,339 | INFO     | traces error code: 0
[2024-10-03 23:25:12] 2024-10-03 21:23:05,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 23:25:12] 2024-10-03 21:23:05,721 [wrapper] ==== pilot stdout END ====
[2024-10-03 23:25:12] 2024-10-03 21:23:05,805 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 23:25:12] 2024-10-03 21:23:05,872 [wrapper] pilotpid: 23626
[2024-10-03 23:25:12] 2024-10-03 21:23:05,983 [wrapper] Pilot exit status: 0
[2024-10-03 23:25:12] 2024-10-03 21:23:06,328 [wrapper] pandaids: 6354020602
[2024-10-03 23:25:12] 2024-10-03 21:23:06,708 [wrapper] cleanup supervisor_pilot 14979 23627
[2024-10-03 23:25:12] 2024-10-03 21:23:06,808 [wrapper] Test setup, not cleaning
[2024-10-03 23:25:12] 2024-10-03 21:23:06,882 [wrapper] ==== wrapper stdout END ====
[2024-10-03 23:25:12] 2024-10-03 21:23:06,954 [wrapper] ==== wrapper stderr END ====
[2024-10-03 23:25:12] 2024-10-03 21:23:07,147 [wrapper] apfmon messages muted
[2024-10-03 23:25:13]  *** Error codes and diagnostics ***
[2024-10-03 23:25:13]     "exeErrorCode": 0,
[2024-10-03 23:25:13]     "exeErrorDiag": "",
[2024-10-03 23:25:13]     "pilotErrorCode": 0,
[2024-10-03 23:25:13]     "pilotErrorDiag": "",
[2024-10-03 23:25:13]  *** Listing of results directory ***
[2024-10-03 23:25:13] total 887124
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc    484599 Oct  2 10:55 pilot3.tar.gz
[2024-10-03 23:25:13] -rwx------. 1 boinc boinc     33814 Oct  2 10:58 runpilot2-wrapper.sh
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc      5653 Oct  2 11:00 queuedata.json
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc       100 Oct  3 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 23:25:13] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 16:37 run_atlas
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc       105 Oct  3 16:37 job.xml
[2024-10-03 23:25:13] -rw-r--r--. 2 boinc boinc 636080510 Oct  3 16:37 EVNT.41466530._000026.pool.root.1
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc      6344 Oct  3 16:37 init_data.xml
[2024-10-03 23:25:13] drwxrwx--x. 2 boinc boinc        68 Oct  3 16:37 shared
[2024-10-03 23:25:13] -rw-r--r--. 2 boinc boinc    498168 Oct  3 16:37 input.tar.gz
[2024-10-03 23:25:13] -rw-r--r--. 2 boinc boinc     17537 Oct  3 16:37 start_atlas.sh
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc         0 Oct  3 16:37 boinc_lockfile
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc      2532 Oct  3 16:37 pandaJob.out
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc       424 Oct  3 16:38 setup.sh.local
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc   1024549 Oct  3 16:41 agis_schedconf.cvmfs.json
[2024-10-03 23:25:13] drwx------. 4 boinc boinc      4096 Oct  3 16:41 pilot3
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc 262919439 Oct  3 23:19 HITS.41481181._000733.pool.root.1
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc       532 Oct  3 23:20 boinc_task_state.xml
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc      1020 Oct  3 23:21 memory_monitor_summary.json
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc   1615815 Oct  3 23:21 agis_ddmendpoints.agis.ALL.json
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc    508482 Oct  3 23:21 log.41481181._000733.job.log.tgz.1
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc        95 Oct  3 23:21 pilot_heartbeat.json
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc      7693 Oct  3 23:22 heartbeat.json
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc      4274 Oct  3 23:23 pilotlog.txt
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc   2265930 Oct  3 23:23 log.41481181._000733.job.log.1
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc       357 Oct  3 23:23 output.list
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc       620 Oct  3 23:23 runtime_log
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc   2795520 Oct  3 23:23 result.tar.gz
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc     10999 Oct  3 23:23 runtime_log.err
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc       646 Oct  3 23:23 DChKDmKNAG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmsUnKDmDtIE6m.diag
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc      8192 Oct  3 23:25 boinc_mmap_file
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc        28 Oct  3 23:25 wrapper_checkpoint.txt
[2024-10-03 23:25:13] -rw-r--r--. 1 boinc boinc     21516 Oct  3 23:25 stderr.txt
[2024-10-03 23:25:13] HITS file was successfully produced:
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc 262919439 Oct  3 23:19 shared/HITS.pool.root.1
[2024-10-03 23:25:13]  *** Contents of shared directory: ***
[2024-10-03 23:25:13] total 881176
[2024-10-03 23:25:13] -rw-r--r--. 2 boinc boinc 636080510 Oct  3 16:37 ATLAS.root_0
[2024-10-03 23:25:13] -rw-r--r--. 2 boinc boinc    498168 Oct  3 16:37 input.tar.gz
[2024-10-03 23:25:13] -rw-r--r--. 2 boinc boinc     17537 Oct  3 16:37 start_atlas.sh
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc 262919439 Oct  3 23:19 HITS.pool.root.1
[2024-10-03 23:25:13] -rw-------. 1 boinc boinc   2795520 Oct  3 23:23 result.tar.gz
23:25:14 (18002): run_atlas exited; CPU time 88569.898429
23:25:14 (18002): called boinc_finish(0)

</stderr_txt>
]]>

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