Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:02:52 (7132): wrapper (7.7.26015): starting
19:02:52 (7132): wrapper: running run_atlas (--nthreads 8)
[2024-10-02 19:02:52] Arguments: --nthreads 8
[2024-10-02 19:02:52] Threads: 8
[2024-10-02 19:02:52] Checking for CVMFS
[2024-10-02 19:02:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-02 19:02:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-02 19:02:54] Running cvmfs_config stat atlas.cern.ch
[2024-10-02 19:02:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-02 19:02:55] 2.11.2.0 11454 53097 89672 137897 1 59 16962356 25165825 4517 130560 0 36097155 99.927 20368875 9155 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-02 19:02:55] CVMFS is ok
[2024-10-02 19:02:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-02 19:02:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-02 19:02:55] Further information can be found at the LHC@home message board.
[2024-10-02 19:02:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-02 19:02:55] Checking for apptainer binary...
[2024-10-02 19:02:55] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-02 19:02:55] Running /usr/bin/apptainer --version
[2024-10-02 19:02:55] apptainer version 1.3.2-1.el7
[2024-10-02 19:02:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-02 19:20:33] cg-vwn303.simple-grid.lan
[2024-10-02 19:20:33] apptainer works
[2024-10-02 19:20:33] Set ATHENA_PROC_NUMBER=8
[2024-10-02 19:20:33] Set ATHENA_CORE_NUMBER=8
[2024-10-02 19:20:34] Starting ATLAS job with PandaID=6353993737
[2024-10-02 19:20:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 03:04:31]  *** The last 200 lines of the pilot log: ***
[2024-10-03 03:04:31] 2024-10-03 00:39:25,276 | INFO     | current chi2=5.68539042188626 (change=43.56819842594205 %)
[2024-10-03 03:04:31] 2024-10-03 00:39:25,277 | INFO     | model: linear, x: [1727890908.0, 1727890969.0, 1727891030.0, 1727891091.0, 1727891152.0, 1727891213.0, 1727891274.0, 1727891335.0, 1727891396.0, 1727891457.0, 1727
[2024-10-03 03:04:31] 2024-10-03 00:39:25,277 | INFO     | sum of square deviations: 21527882710.0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,282 | INFO     | sum of deviations: 197494666341.0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,283 | INFO     | mean x: 1727903413.0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,283 | INFO     | mean y: 2509136.287104623
[2024-10-03 03:04:31] 2024-10-03 00:39:25,283 | INFO     | -- intersect: -15849105842.151716
[2024-10-03 03:04:31] 2024-10-03 00:39:25,283 | INFO     | intersect: -15849105842.151716
[2024-10-03 03:04:31] 2024-10-03 00:39:25,284 | INFO     | chi2: 3.63783634343259
[2024-10-03 03:04:31] 2024-10-03 00:39:25,284 | INFO     | current chi2=3.63783634343259 (change=36.01430907139613 %)
[2024-10-03 03:04:31] 2024-10-03 00:39:25,284 | INFO     | model: linear, x: [1727891213.0, 1727891274.0, 1727891335.0, 1727891396.0, 1727891457.0, 1727891518.0, 1727891579.0, 1727891640.0, 1727891701.0, 1727891762.0, 1727
[2024-10-03 03:04:31] 2024-10-03 00:39:25,285 | INFO     | sum of square deviations: 20751710017.5
[2024-10-03 03:04:31] 2024-10-03 00:39:25,289 | INFO     | sum of deviations: 118596256394.5
[2024-10-03 03:04:31] 2024-10-03 00:39:25,290 | INFO     | mean x: 1727903565.5
[2024-10-03 03:04:31] 2024-10-03 00:39:25,290 | INFO     | mean y: 2524638.539408867
[2024-10-03 03:04:31] 2024-10-03 00:39:25,290 | INFO     | -- intersect: -9872463692.841301
[2024-10-03 03:04:31] 2024-10-03 00:39:25,290 | INFO     | intersect: -9872463692.841301
[2024-10-03 03:04:31] 2024-10-03 00:39:25,291 | INFO     | chi2: 2.3920964798003763
[2024-10-03 03:04:31] 2024-10-03 00:39:25,291 | INFO     | current chi2=2.3920964798003763 (change=34.24397762920688 %)
[2024-10-03 03:04:31] 2024-10-03 00:39:25,291 | INFO     | model: linear, x: [1727891518.0, 1727891579.0, 1727891640.0, 1727891701.0, 1727891762.0, 1727891823.0, 1727891884.0, 1727891945.0, 1727892006.0, 1727892067.0, 1727
[2024-10-03 03:04:31] 2024-10-03 00:39:25,291 | INFO     | sum of square deviations: 19994421400.0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,296 | INFO     | sum of deviations: 40820438720.0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,297 | INFO     | mean x: 1727903718.0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,297 | INFO     | mean y: 2540301.1421446386
[2024-10-03 03:04:31] 2024-10-03 00:39:25,297 | INFO     | -- intersect: -3525133064.5236983
[2024-10-03 03:04:31] 2024-10-03 00:39:25,297 | INFO     | intersect: -3525133064.5236983
[2024-10-03 03:04:31] 2024-10-03 00:39:25,298 | INFO     | chi2: 1.1687610303886342
[2024-10-03 03:04:31] 2024-10-03 00:39:25,298 | INFO     | current chi2=1.1687610303886342 (change=51.140723618047005 %)
[2024-10-03 03:04:31] 2024-10-03 00:39:25,298 | INFO     | model: linear, x: [1727891823.0, 1727891884.0, 1727891945.0, 1727892006.0, 1727892067.0, 1727892128.0, 1727892189.0, 1727892250.0, 1727892311.0, 1727892372.0, 1727
[2024-10-03 03:04:31] 2024-10-03 00:39:25,298 | INFO     | sum of square deviations: 19255784295.0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,303 | INFO     | sum of deviations: 7585589790.999992
[2024-10-03 03:04:31] 2024-10-03 00:39:25,303 | INFO     | mean x: 1727903870.5
[2024-10-03 03:04:31] 2024-10-03 00:39:25,304 | INFO     | mean y: 2547131.6414141413
[2024-10-03 03:04:31] 2024-10-03 00:39:25,304 | INFO     | -- intersect: -678140279.4290147
[2024-10-03 03:04:31] 2024-10-03 00:39:25,304 | INFO     | intersect: -678140279.4290147
[2024-10-03 03:04:31] 2024-10-03 00:39:25,304 | INFO     | chi2: 0.8379199220135805
[2024-10-03 03:04:31] 2024-10-03 00:39:25,305 | INFO     | current chi2=0.8379199220135805 (change=28.306993454859043 %)
[2024-10-03 03:04:31] 2024-10-03 00:39:25,305 | INFO     | model: linear, x: [1727892128.0, 1727892189.0, 1727892250.0, 1727892311.0, 1727892372.0, 1727892433.0, 1727892494.0, 1727892555.0, 1727892616.0, 1727892677.0, 1727
[2024-10-03 03:04:31] 2024-10-03 00:39:25,305 | INFO     | sum of square deviations: 18535566140.0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,310 | INFO     | sum of deviations: 11050347884.000008
[2024-10-03 03:04:31] 2024-10-03 00:39:25,310 | INFO     | mean x: 1727904023.0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,310 | INFO     | mean y: 2546385.757033248
[2024-10-03 03:04:31] 2024-10-03 00:39:25,310 | INFO     | -- intersect: -1027578101.4097316
[2024-10-03 03:04:31] 2024-10-03 00:39:25,311 | INFO     | intersect: -1027578101.4097316
[2024-10-03 03:04:31] 2024-10-03 00:39:25,311 | INFO     | chi2: 0.8159421415891523
[2024-10-03 03:04:31] 2024-10-03 00:39:25,311 | INFO     | current chi2=0.8159421415891523 (change=2.622897468723975 %)
[2024-10-03 03:04:31] 2024-10-03 00:39:25,311 | INFO     | left removable region: 60
[2024-10-03 03:04:31] 2024-10-03 00:39:25,312 | INFO     | model: linear, x: [1727893958.0, 1727894019.0, 1727894080.0, 1727894141.0, 1727894202.0, 1727894263.0, 1727894324.0, 1727894385.0, 1727894446.0, 1727894507.0, 1727
[2024-10-03 03:04:31] 2024-10-03 00:39:25,312 | INFO     | sum of square deviations: 13872669410.0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,316 | INFO     | sum of deviations: 28308350946.99999
[2024-10-03 03:04:31] 2024-10-03 00:39:25,316 | INFO     | mean x: 1727904755.0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,316 | INFO     | mean y: 2554055.6985915494
[2024-10-03 03:04:31] 2024-10-03 00:39:25,317 | INFO     | -- intersect: -3523381203.1832123
[2024-10-03 03:04:31] 2024-10-03 00:39:25,317 | INFO     | intersect: -3523381203.1832123
[2024-10-03 03:04:31] 2024-10-03 00:39:25,318 | INFO     | chi2: 0.0015744175079871595
[2024-10-03 03:04:31] 2024-10-03 00:39:25,318 | INFO     | -- intersect: -3523381203.1832123
[2024-10-03 03:04:31] 2024-10-03 00:39:25,318 | INFO     | current memory leak: 2.04 B/s (using 355 data points, chi2=0.00)
[2024-10-03 03:04:31] 2024-10-03 00:39:25,319 | INFO     | ..............................
[2024-10-03 03:04:31] 2024-10-03 00:39:25,319 | INFO     | . Timing measurements:
[2024-10-03 03:04:31] 2024-10-03 00:39:25,319 | INFO     | . get job = 0 s
[2024-10-03 03:04:31] 2024-10-03 00:39:25,319 | INFO     | . initial setup = 7 s
[2024-10-03 03:04:31] 2024-10-03 00:39:25,320 | INFO     | . payload setup = 127 s
[2024-10-03 03:04:31] 2024-10-03 00:39:25,320 | INFO     | . stage-in = 0 s
[2024-10-03 03:04:31] 2024-10-03 00:39:25,320 | INFO     | . payload execution = 25812 s
[2024-10-03 03:04:31] 2024-10-03 00:39:25,320 | INFO     | . stage-out = 2 s
[2024-10-03 03:04:31] 2024-10-03 00:39:25,320 | INFO     | . log creation = 0 s
[2024-10-03 03:04:31] 2024-10-03 00:39:25,320 | INFO     | ..............................
[2024-10-03 03:04:31] 2024-10-03 00:39:25,442 | INFO     | 
[2024-10-03 03:04:31] 2024-10-03 00:39:25,443 | INFO     | job summary report
[2024-10-03 03:04:31] 2024-10-03 00:39:25,443 | INFO     | --------------------------------------------------
[2024-10-03 03:04:31] 2024-10-03 00:39:25,443 | INFO     | PanDA job id: 6353993737
[2024-10-03 03:04:31] 2024-10-03 00:39:25,443 | INFO     | task id: 41481181
[2024-10-03 03:04:31] 2024-10-03 00:39:25,443 | INFO     | errors: (none)
[2024-10-03 03:04:31] 2024-10-03 00:39:25,443 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 03:04:31] 2024-10-03 00:39:25,443 | INFO     | pilot state: finished 
[2024-10-03 03:04:31] 2024-10-03 00:39:25,443 | INFO     | transexitcode: 0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,443 | INFO     | exeerrorcode: 0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | exeerrordiag: 
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | exitcode: 0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | exitmsg: OK
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | cpuconsumptiontime: 93613 s
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | nevents: 400
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | neventsw: 0
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | pid: 4445
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | pgrp: 4445
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | corecount: 8
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | event service: False
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | sizes: {0: 2433907, 1: 2435272, 2: 2435471, 13: 2435471, 24: 2435527, 34: 2435555, 45: 2435711, 56: 2435739, 67: 2435767, 77: 2435795, 88: 2436365, 99: 2436365, 25
[2024-10-03 03:04:31] 2024-10-03 00:39:25,444 | INFO     | --------------------------------------------------
[2024-10-03 03:04:31] 2024-10-03 00:39:25,445 | INFO     | 
[2024-10-03 03:04:31] 2024-10-03 00:39:25,445 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-03 03:04:31] 2024-10-03 00:39:25,472 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,472 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,472 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,473 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,474 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 03:04:31] 2024-10-03 00:39:25,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,474 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 03:04:31] 2024-10-03 00:39:25,474 | INFO     | job 6353993737 has completed (purged errors)
[2024-10-03 03:04:31] 2024-10-03 00:39:25,475 | INFO     | overall cleanup function is called
[2024-10-03 03:04:31] 2024-10-03 00:39:26,484 | INFO     | --- collectZombieJob: --- 10, [4445]
[2024-10-03 03:04:31] 2024-10-03 00:39:26,484 | INFO     | zombie collector waiting for pid 4445
[2024-10-03 03:04:31] 2024-10-03 00:39:26,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 03:04:31] 2024-10-03 00:39:26,484 | INFO     | collected zombie processes
[2024-10-03 03:04:31] 2024-10-03 00:39:26,484 | INFO     | will  attempt to kill all subprocesses of pid=4445
[2024-10-03 03:04:31] 2024-10-03 00:39:26,627 | INFO     | process IDs to be killed: [4445] (in reverse order)
[2024-10-03 03:04:31] 2024-10-03 00:39:26,763 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 03:04:31] 2024-10-03 00:39:26,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 03:04:31] 2024-10-03 00:39:26,767 | INFO     | did not find any defunct processes belonging to 4445
[2024-10-03 03:04:31] 2024-10-03 00:39:26,771 | INFO     | did not find any defunct processes belonging to 4445
[2024-10-03 03:04:31] 2024-10-03 00:39:26,771 | INFO     | ready for new job
[2024-10-03 03:04:31] 2024-10-03 00:39:26,771 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 03:04:31] 2024-10-03 00:39:26,777 | INFO     | *************************************
[2024-10-03 03:04:31] 2024-10-03 00:39:26,778 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 03:04:31] 2024-10-03 00:39:26,778 | INFO     | *************************************
[2024-10-03 03:04:31] 2024-10-03 00:39:26,778 | INFO     | 
[2024-10-03 03:04:31] 2024-10-03 00:39:26,778 | INFO     | pilot is running in a VM
[2024-10-03 03:04:31] 2024-10-03 00:39:26,779 | INFO     | architecture information:
[2024-10-03 03:04:31] 2024-10-03 00:39:26,780 | INFO     | executing command: cat /etc/os-release
[2024-10-03 03:04:31] 2024-10-03 00:39:26,815 | INFO     | cat /etc/os-release:
[2024-10-03 03:04:31] NAME="CentOS Linux"
[2024-10-03 03:04:31] VERSION="7 (Core)"
[2024-10-03 03:04:31] ID="centos"
[2024-10-03 03:04:31] ID_LIKE="rhel fedora"
[2024-10-03 03:04:31] VERSION_ID="7"
[2024-10-03 03:04:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 03:04:31] ANSI_COLOR="0;31"
[2024-10-03 03:04:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 03:04:31] HOME_URL="https://www.centos.org/"
[2024-10-03 03:04:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 03:04:31] 
[2024-10-03 03:04:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 03:04:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 03:04:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 03:04:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 03:04:31] 
[2024-10-03 03:04:31] 2024-10-03 00:39:26,816 | INFO     | *************************************
[2024-10-03 03:04:31] 2024-10-03 00:39:27,319 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-03 03:04:31] 2024-10-03 00:39:27,409 | INFO     | sufficient remaining disk space (486607421440 B)
[2024-10-03 03:04:31] 2024-10-03 00:39:27,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 03:04:31] 2024-10-03 00:39:27,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 03:04:31] 2024-10-03 00:39:27,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 03:04:31] 2024-10-03 00:39:27,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 03:04:31] 2024-10-03 00:39:27,413 | INFO     | aborting loop
[2024-10-03 03:04:31] 2024-10-03 00:39:27,416 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-03 03:04:31] 2024-10-03 00:39:27,416 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 03:04:31] 2024-10-03 00:39:27,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 03:04:31] 2024-10-03 00:39:27,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 03:04:31] 2024-10-03 00:39:27,698 | INFO     | all payload control threads have been joined
[2024-10-03 03:04:31] 2024-10-03 00:39:27,768 | INFO     | all data control threads have been joined
[2024-10-03 03:04:31] 2024-10-03 00:39:28,175 | INFO     | all job control threads have been joined
[2024-10-03 03:04:31] 2024-10-03 00:39:28,416 | INFO     | [job] retrieve thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:28,417 | INFO     | [job] queue monitor thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:28,419 | INFO     | [job] job monitor thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:28,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 03:04:31] 2024-10-03 00:39:28,522 | INFO     | [payload] failed_post thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:28,639 | INFO     | [data] copytool_in thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:28,703 | INFO     | [payload] control thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:28,775 | INFO     | [data] control thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:29,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 03:04:31] 2024-10-03 00:39:29,181 | INFO     | [job] control thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:29,330 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:29,331 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:29,343 | INFO     | [job] validate thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:29,395 | INFO     | [payload] validate_post thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:29,726 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:30,518 | INFO     | [data] copytool_out thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:33,032 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:37,743 | INFO     | job.realtimelogging is not enabled
[2024-10-03 03:04:31] 2024-10-03 00:39:38,749 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 03:04:31] 2024-10-03 00:39:39,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140268347410240)>', '<ExcThread(monitor, started 140267885668096)>']
[2024-10-03 03:04:31] 2024-10-03 00:39:39,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 03:04:31] 2024-10-03 00:39:39,487 | INFO     | [monitor] control thread has ended
[2024-10-03 03:04:31] 2024-10-03 00:39:44,202 | INFO     | all workflow threads have been joined
[2024-10-03 03:04:31] 2024-10-03 00:39:44,202 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 03:04:31] 2024-10-03 00:39:44,203 | INFO     | traces error code: 0
[2024-10-03 03:04:31] 2024-10-03 00:39:44,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 03:04:31] 2024-10-03 00:39:44,459 [wrapper] ==== pilot stdout END ====
[2024-10-03 03:04:31] 2024-10-03 00:39:44,476 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 03:04:31] 2024-10-03 00:39:44,547 [wrapper] pilotpid: 26651
[2024-10-03 03:04:31] 2024-10-03 00:39:44,553 [wrapper] Pilot exit status: 0
[2024-10-03 03:04:31] 2024-10-03 00:39:44,786 [wrapper] pandaids: 6353993737
[2024-10-03 03:04:31] 2024-10-03 00:39:44,962 [wrapper] cleanup supervisor_pilot 14345 26652
[2024-10-03 03:04:31] 2024-10-03 00:39:44,977 [wrapper] Test setup, not cleaning
[2024-10-03 03:04:31] 2024-10-03 00:39:44,990 [wrapper] ==== wrapper stdout END ====
[2024-10-03 03:04:31] 2024-10-03 00:39:44,998 [wrapper] ==== wrapper stderr END ====
[2024-10-03 03:04:31] 2024-10-03 00:39:45,015 [wrapper] apfmon messages muted
[2024-10-03 03:04:31]  *** Error codes and diagnostics ***
[2024-10-03 03:04:31]     "exeErrorCode": 0,
[2024-10-03 03:04:31]     "exeErrorDiag": "",
[2024-10-03 03:04:31]     "pilotErrorCode": 0,
[2024-10-03 03:04:31]     "pilotErrorDiag": "",
[2024-10-03 03:04:31]  *** Listing of results directory ***
[2024-10-03 03:04:31] total 900396
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc    484599 Oct  2 10:55 pilot3.tar.gz
[2024-10-03 03:04:31] -rwx------. 1 boinc boinc     33814 Oct  2 10:57 runpilot2-wrapper.sh
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc      5653 Oct  2 11:00 queuedata.json
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc       100 Oct  2 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 03:04:31] -rwxr-xr-x. 1 boinc boinc      7986 Oct  2 19:02 run_atlas
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc       105 Oct  2 19:02 job.xml
[2024-10-03 03:04:31] -rw-r--r--. 2 boinc boinc 644780739 Oct  2 19:02 EVNT.41466530._000001.pool.root.1
[2024-10-03 03:04:31] -rw-r--r--. 2 boinc boinc     17537 Oct  2 19:02 start_atlas.sh
[2024-10-03 03:04:31] drwxrwx--x. 2 boinc boinc        68 Oct  2 19:02 shared
[2024-10-03 03:04:31] -rw-r--r--. 2 boinc boinc    498154 Oct  2 19:02 input.tar.gz
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc      6346 Oct  2 19:02 init_data.xml
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc         0 Oct  2 19:02 boinc_lockfile
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc      2525 Oct  2 19:20 pandaJob.out
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc       424 Oct  2 19:20 setup.sh.local
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc   1022906 Oct  2 19:23 agis_schedconf.cvmfs.json
[2024-10-03 03:04:31] drwx------. 4 boinc boinc      4096 Oct  2 19:23 pilot3
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc 266830403 Oct  3 02:38 HITS.41481181._000008.pool.root.1
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc       532 Oct  3 02:38 boinc_task_state.xml
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc        95 Oct  3 02:38 pilot_heartbeat.json
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc      1018 Oct  3 02:39 memory_monitor_summary.json
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc   1615815 Oct  3 02:39 agis_ddmendpoints.agis.ALL.json
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc    505521 Oct  3 02:39 log.41481181._000008.job.log.tgz.1
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc      7684 Oct  3 02:39 heartbeat.json
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc      4469 Oct  3 02:39 pilotlog.txt
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc   2760775 Oct  3 02:39 log.41481181._000008.job.log.1
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc       357 Oct  3 02:39 output.list
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc       620 Oct  3 02:39 runtime_log
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc   3287040 Oct  3 02:39 result.tar.gz
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc       646 Oct  3 02:39 wwGKDmGMAG6n7OlckoGmwREmGgkVDo1bjSoqOlfODmj6rKDmm3lnOo.diag
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc     10999 Oct  3 02:39 runtime_log.err
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc      8192 Oct  3 03:04 boinc_mmap_file
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc        28 Oct  3 03:04 wrapper_checkpoint.txt
[2024-10-03 03:04:31] -rw-r--r--. 1 boinc boinc     21616 Oct  3 03:04 stderr.txt
[2024-10-03 03:04:31] HITS file was successfully produced:
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc 266830403 Oct  3 02:38 shared/HITS.pool.root.1
[2024-10-03 03:04:31]  *** Contents of shared directory: ***
[2024-10-03 03:04:31] total 893972
[2024-10-03 03:04:31] -rw-r--r--. 2 boinc boinc 644780739 Oct  2 19:02 ATLAS.root_0
[2024-10-03 03:04:31] -rw-r--r--. 2 boinc boinc     17537 Oct  2 19:02 start_atlas.sh
[2024-10-03 03:04:31] -rw-r--r--. 2 boinc boinc    498154 Oct  2 19:02 input.tar.gz
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc 266830403 Oct  3 02:38 HITS.pool.root.1
[2024-10-03 03:04:31] -rw-------. 1 boinc boinc   3287040 Oct  3 02:39 result.tar.gz
03:04:33 (7132): run_atlas exited; CPU time 93524.894636
03:04:33 (7132): called boinc_finish(0)

</stderr_txt>
]]>

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