Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:48:37 (31795): wrapper (7.7.26015): starting
00:48:37 (31795): wrapper: running run_atlas (--nthreads 8)
[2024-10-04 00:48:37] Arguments: --nthreads 8
[2024-10-04 00:48:37] Threads: 8
[2024-10-04 00:48:37] Checking for CVMFS
[2024-10-04 00:48:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-04 00:48:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-04 00:48:38] Running cvmfs_config stat atlas.cern.ch
[2024-10-04 00:48:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-04 00:48:40] 2.11.2.0 16994 54859 77972 137948 3 196 14350335 25165825 4123 130560 0 38755370 99.929 20620684 8734 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-04 00:48:40] CVMFS is ok
[2024-10-04 00:48:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-04 00:48:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-04 00:48:40] Further information can be found at the LHC@home message board.
[2024-10-04 00:48:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-04 00:48:40] Checking for apptainer binary...
[2024-10-04 00:48:40] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-04 00:48:40] Running /usr/bin/apptainer --version
[2024-10-04 00:48:40] apptainer version 1.3.2-1.el7
[2024-10-04 00:48:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-04 00:48:42] cg-vwn280.simple-grid.lan
[2024-10-04 00:48:42] apptainer works
[2024-10-04 00:48:42] Set ATHENA_PROC_NUMBER=8
[2024-10-04 00:48:42] Set ATHENA_CORE_NUMBER=8
[2024-10-04 00:48:42] Starting ATLAS job with PandaID=6353993878
[2024-10-04 00:48:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-04 07:42:35]  *** The last 200 lines of the pilot log: ***
[2024-10-04 07:42:35] 2024-10-04 05:31:11,117 | INFO     | intersect: -15775590998.22612
[2024-10-04 07:42:35] 2024-10-04 05:31:11,118 | INFO     | chi2: 5.732323198131374
[2024-10-04 07:42:35] 2024-10-04 05:31:11,118 | INFO     | model: linear, x: [1727995800.0, 1727995861.0, 1727995922.0, 1727995983.0, 1727996044.0, 1727996105.0, 1727996166.0, 1727996227.0, 1727996288.0, 1727996349.0, 1727
[2024-10-04 07:42:35] 2024-10-04 05:31:11,119 | INFO     | sum of square deviations: 18252584090.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,123 | INFO     | sum of deviations: 224059270311.99997
[2024-10-04 07:42:35] 2024-10-04 05:31:11,123 | INFO     | mean x: 1728007634.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,124 | INFO     | mean y: 2507957.616966581
[2024-10-04 07:42:35] 2024-10-04 05:31:11,124 | INFO     | -- intersect: -21209618920.337086
[2024-10-04 07:42:35] 2024-10-04 05:31:11,124 | INFO     | intersect: -21209618920.337086
[2024-10-04 07:42:35] 2024-10-04 05:31:11,124 | INFO     | chi2: 4.193398155718168
[2024-10-04 07:42:35] 2024-10-04 05:31:11,125 | INFO     | current chi2=4.193398155718168 (change=26.84644583394853 %)
[2024-10-04 07:42:35] 2024-10-04 05:31:11,125 | INFO     | model: linear, x: [1727995800.0, 1727995861.0, 1727995922.0, 1727995983.0, 1727996044.0, 1727996105.0, 1727996166.0, 1727996227.0, 1727996288.0, 1727996349.0, 1727
[2024-10-04 07:42:35] 2024-10-04 05:31:11,125 | INFO     | sum of square deviations: 17557761760.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,130 | INFO     | sum of deviations: 220900100137.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,130 | INFO     | mean x: 1728007481.5
[2024-10-04 07:42:35] 2024-10-04 05:31:11,130 | INFO     | mean y: 2507264.2135416665
[2024-10-04 07:42:35] 2024-10-04 05:31:11,130 | INFO     | -- intersect: -21738135473.65871
[2024-10-04 07:42:35] 2024-10-04 05:31:11,131 | INFO     | intersect: -21738135473.65871
[2024-10-04 07:42:35] 2024-10-04 05:31:11,131 | INFO     | chi2: 4.193278843763514
[2024-10-04 07:42:35] 2024-10-04 05:31:11,131 | INFO     | current chi2=4.193278843763514 (change=0.002845233155169388 %)
[2024-10-04 07:42:35] 2024-10-04 05:31:11,131 | INFO     | right removable region: 383
[2024-10-04 07:42:35] 2024-10-04 05:31:11,132 | INFO     | model: linear, x: [1727996105.0, 1727996166.0, 1727996227.0, 1727996288.0, 1727996349.0, 1727996410.0, 1727996471.0, 1727996532.0, 1727996593.0, 1727996654.0, 1727
[2024-10-04 07:42:35] 2024-10-04 05:31:11,132 | INFO     | sum of square deviations: 18252584090.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,137 | INFO     | sum of deviations: 71253476214.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,137 | INFO     | mean x: 1728007939.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,137 | INFO     | mean y: 2518924.177377892
[2024-10-04 07:42:35] 2024-10-04 05:31:11,137 | INFO     | -- intersect: -6743187435.646858
[2024-10-04 07:42:35] 2024-10-04 05:31:11,137 | INFO     | intersect: -6743187435.646858
[2024-10-04 07:42:35] 2024-10-04 05:31:11,138 | INFO     | chi2: 3.2017501064407456
[2024-10-04 07:42:35] 2024-10-04 05:31:11,138 | INFO     | current chi2=3.2017501064407456 (change=44.145680629374596 %)
[2024-10-04 07:42:35] 2024-10-04 05:31:11,139 | INFO     | model: linear, x: [1727996410.0, 1727996471.0, 1727996532.0, 1727996593.0, 1727996654.0, 1727996715.0, 1727996776.0, 1727996837.0, 1727996898.0, 1727996959.0, 1727
[2024-10-04 07:42:35] 2024-10-04 05:31:11,142 | INFO     | sum of square deviations: 17557761760.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,147 | INFO     | sum of deviations: -3163502669.4999313
[2024-10-04 07:42:35] 2024-10-04 05:31:11,147 | INFO     | mean x: 1728008091.5
[2024-10-04 07:42:35] 2024-10-04 05:31:11,147 | INFO     | mean y: 2535257.3463541665
[2024-10-04 07:42:35] 2024-10-04 05:31:11,147 | INFO     | -- intersect: 313882357.5690953
[2024-10-04 07:42:35] 2024-10-04 05:31:11,147 | INFO     | intersect: 313882357.5690953
[2024-10-04 07:42:35] 2024-10-04 05:31:11,148 | INFO     | chi2: 1.9665899413064767
[2024-10-04 07:42:35] 2024-10-04 05:31:11,148 | INFO     | current chi2=1.9665899413064767 (change=38.57765672122819 %)
[2024-10-04 07:42:35] 2024-10-04 05:31:11,148 | INFO     | model: linear, x: [1727996715.0, 1727996776.0, 1727996837.0, 1727996898.0, 1727996959.0, 1727997020.0, 1727997081.0, 1727997142.0, 1727997203.0, 1727997264.0, 1727
[2024-10-04 07:42:35] 2024-10-04 05:31:11,149 | INFO     | sum of square deviations: 16880800230.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,153 | INFO     | sum of deviations: -32236861662.000004
[2024-10-04 07:42:35] 2024-10-04 05:31:11,154 | INFO     | mean x: 1728008244.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,154 | INFO     | mean y: 2541770.659630607
[2024-10-04 07:42:35] 2024-10-04 05:31:11,154 | INFO     | -- intersect: 3302477908.3804874
[2024-10-04 07:42:35] 2024-10-04 05:31:11,154 | INFO     | intersect: 3302477908.3804874
[2024-10-04 07:42:35] 2024-10-04 05:31:11,155 | INFO     | chi2: 1.6507212074189836
[2024-10-04 07:42:35] 2024-10-04 05:31:11,155 | INFO     | current chi2=1.6507212074189836 (change=16.061748677390774 %)
[2024-10-04 07:42:35] 2024-10-04 05:31:11,155 | INFO     | left removable region: 30
[2024-10-04 07:42:35] 2024-10-04 05:31:11,155 | INFO     | model: linear, x: [1727997630.0, 1727997691.0, 1727997752.0, 1727997813.0, 1727997874.0, 1727997935.0, 1727997996.0, 1727998057.0, 1727998118.0, 1727998179.0, 1727
[2024-10-04 07:42:35] 2024-10-04 05:31:11,156 | INFO     | sum of square deviations: 13639518992.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,160 | INFO     | sum of deviations: 24190032083.000004
[2024-10-04 07:42:35] 2024-10-04 05:31:11,160 | INFO     | mean x: 1728008366.0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,160 | INFO     | mean y: 2552088.104815864
[2024-10-04 07:42:35] 2024-10-04 05:31:11,160 | INFO     | -- intersect: -3062114476.584873
[2024-10-04 07:42:35] 2024-10-04 05:31:11,160 | INFO     | intersect: -3062114476.584873
[2024-10-04 07:42:35] 2024-10-04 05:31:11,161 | INFO     | chi2: 0.006658792519839576
[2024-10-04 07:42:35] 2024-10-04 05:31:11,161 | INFO     | -- intersect: -3062114476.584873
[2024-10-04 07:42:35] 2024-10-04 05:31:11,161 | INFO     | current memory leak: 1.77 B/s (using 353 data points, chi2=0.01)
[2024-10-04 07:42:35] 2024-10-04 05:31:11,162 | INFO     | ..............................
[2024-10-04 07:42:35] 2024-10-04 05:31:11,162 | INFO     | . Timing measurements:
[2024-10-04 07:42:35] 2024-10-04 05:31:11,162 | INFO     | . get job = 0 s
[2024-10-04 07:42:35] 2024-10-04 05:31:11,162 | INFO     | . initial setup = 2 s
[2024-10-04 07:42:35] 2024-10-04 05:31:11,162 | INFO     | . payload setup = 12 s
[2024-10-04 07:42:35] 2024-10-04 05:31:11,163 | INFO     | . stage-in = 0 s
[2024-10-04 07:42:35] 2024-10-04 05:31:11,163 | INFO     | . payload execution = 23991 s
[2024-10-04 07:42:35] 2024-10-04 05:31:11,163 | INFO     | . stage-out = 4 s
[2024-10-04 07:42:35] 2024-10-04 05:31:11,163 | INFO     | . log creation = 2 s
[2024-10-04 07:42:35] 2024-10-04 05:31:11,163 | INFO     | ..............................
[2024-10-04 07:42:35] 2024-10-04 05:31:11,297 | INFO     | 
[2024-10-04 07:42:35] 2024-10-04 05:31:11,297 | INFO     | job summary report
[2024-10-04 07:42:35] 2024-10-04 05:31:11,297 | INFO     | --------------------------------------------------
[2024-10-04 07:42:35] 2024-10-04 05:31:11,297 | INFO     | PanDA job id: 6353993878
[2024-10-04 07:42:35] 2024-10-04 05:31:11,297 | INFO     | task id: 41481181
[2024-10-04 07:42:35] 2024-10-04 05:31:11,298 | INFO     | errors: (none)
[2024-10-04 07:42:35] 2024-10-04 05:31:11,298 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-04 07:42:35] 2024-10-04 05:31:11,298 | INFO     | pilot state: finished 
[2024-10-04 07:42:35] 2024-10-04 05:31:11,298 | INFO     | transexitcode: 0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,298 | INFO     | exeerrorcode: 0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,298 | INFO     | exeerrordiag: 
[2024-10-04 07:42:35] 2024-10-04 05:31:11,298 | INFO     | exitcode: 0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,298 | INFO     | exitmsg: OK
[2024-10-04 07:42:35] 2024-10-04 05:31:11,298 | INFO     | cpuconsumptiontime: 89571 s
[2024-10-04 07:42:35] 2024-10-04 05:31:11,298 | INFO     | nevents: 400
[2024-10-04 07:42:35] 2024-10-04 05:31:11,298 | INFO     | neventsw: 0
[2024-10-04 07:42:35] 2024-10-04 05:31:11,299 | INFO     | pid: 12177
[2024-10-04 07:42:35] 2024-10-04 05:31:11,299 | INFO     | pgrp: 12177
[2024-10-04 07:42:35] 2024-10-04 05:31:11,299 | INFO     | corecount: 8
[2024-10-04 07:42:35] 2024-10-04 05:31:11,299 | INFO     | event service: False
[2024-10-04 07:42:35] 2024-10-04 05:31:11,299 | INFO     | sizes: {0: 2433919, 1: 2435455, 2: 2435455, 10: 2435689, 12: 2435717, 24008: 2470350, 24014: 2479374, 24016: 2479430, 24102: 2479600}
[2024-10-04 07:42:35] 2024-10-04 05:31:11,299 | INFO     | --------------------------------------------------
[2024-10-04 07:42:35] 2024-10-04 05:31:11,299 | INFO     | 
[2024-10-04 07:42:35] 2024-10-04 05:31:11,299 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2024-10-04 07:42:35] 2024-10-04 05:31:11,940 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,940 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,940 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,940 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,941 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,941 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,941 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,941 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,941 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,941 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,941 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,941 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,942 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,942 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,942 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-04 07:42:35] 2024-10-04 05:31:11,942 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,942 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-04 07:42:35] 2024-10-04 05:31:11,942 | INFO     | job 6353993878 has completed (purged errors)
[2024-10-04 07:42:35] 2024-10-04 05:31:11,943 | INFO     | overall cleanup function is called
[2024-10-04 07:42:35] 2024-10-04 05:31:12,952 | INFO     | --- collectZombieJob: --- 10, [12177]
[2024-10-04 07:42:35] 2024-10-04 05:31:12,952 | INFO     | zombie collector waiting for pid 12177
[2024-10-04 07:42:35] 2024-10-04 05:31:12,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-04 07:42:35] 2024-10-04 05:31:12,953 | INFO     | collected zombie processes
[2024-10-04 07:42:35] 2024-10-04 05:31:12,953 | INFO     | will  attempt to kill all subprocesses of pid=12177
[2024-10-04 07:42:35] 2024-10-04 05:31:13,576 | INFO     | process IDs to be killed: [12177] (in reverse order)
[2024-10-04 07:42:35] 2024-10-04 05:31:14,479 | WARNING  | found no corresponding commands to process id(s)
[2024-10-04 07:42:35] 2024-10-04 05:31:14,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-04 07:42:35] 2024-10-04 05:31:14,482 | INFO     | did not find any defunct processes belonging to 12177
[2024-10-04 07:42:35] 2024-10-04 05:31:14,485 | INFO     | did not find any defunct processes belonging to 12177
[2024-10-04 07:42:35] 2024-10-04 05:31:14,486 | INFO     | ready for new job
[2024-10-04 07:42:35] 2024-10-04 05:31:14,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-04 07:42:35] 2024-10-04 05:31:14,488 | INFO     | *************************************
[2024-10-04 07:42:35] 2024-10-04 05:31:14,488 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-04 07:42:35] 2024-10-04 05:31:14,488 | INFO     | *************************************
[2024-10-04 07:42:35] 2024-10-04 05:31:14,489 | INFO     | 
[2024-10-04 07:42:35] 2024-10-04 05:31:14,489 | INFO     | pilot is running in a VM
[2024-10-04 07:42:35] 2024-10-04 05:31:14,489 | INFO     | architecture information:
[2024-10-04 07:42:35] 2024-10-04 05:31:14,499 | INFO     | executing command: cat /etc/os-release
[2024-10-04 07:42:35] 2024-10-04 05:31:14,715 | INFO     | cat /etc/os-release:
[2024-10-04 07:42:35] NAME="CentOS Linux"
[2024-10-04 07:42:35] VERSION="7 (Core)"
[2024-10-04 07:42:35] ID="centos"
[2024-10-04 07:42:35] ID_LIKE="rhel fedora"
[2024-10-04 07:42:35] VERSION_ID="7"
[2024-10-04 07:42:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-04 07:42:35] ANSI_COLOR="0;31"
[2024-10-04 07:42:35] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-04 07:42:35] HOME_URL="https://www.centos.org/"
[2024-10-04 07:42:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-04 07:42:35] 
[2024-10-04 07:42:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-04 07:42:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-04 07:42:35] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-04 07:42:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-04 07:42:35] 
[2024-10-04 07:42:35] 2024-10-04 05:31:14,715 | INFO     | *************************************
[2024-10-04 07:42:35] 2024-10-04 05:31:15,218 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2024-10-04 07:42:35] 2024-10-04 05:31:15,375 | INFO     | sufficient remaining disk space (488520024064 B)
[2024-10-04 07:42:35] 2024-10-04 05:31:15,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-04 07:42:35] 2024-10-04 05:31:15,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-04 07:42:35] 2024-10-04 05:31:15,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-04 07:42:35] 2024-10-04 05:31:15,380 | INFO     | aborting loop
[2024-10-04 07:42:35] 2024-10-04 05:31:15,859 | INFO     | found 0 job(s) in 20 queues
[2024-10-04 07:42:35] 2024-10-04 05:31:15,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-04 07:42:35] 2024-10-04 05:31:15,859 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-04 07:42:35] 2024-10-04 05:31:16,051 | INFO     | all data control threads have been joined
[2024-10-04 07:42:35] 2024-10-04 05:31:16,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-04 07:42:35] 2024-10-04 05:31:16,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-04 07:42:35] 2024-10-04 05:31:16,382 | INFO     | [job] retrieve thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:16,386 | INFO     | [job] job monitor thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:16,389 | INFO     | [payload] failed_post thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:16,507 | INFO     | all job control threads have been joined
[2024-10-04 07:42:35] 2024-10-04 05:31:16,530 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:16,715 | INFO     | all payload control threads have been joined
[2024-10-04 07:42:35] 2024-10-04 05:31:16,724 | INFO     | [payload] validate_post thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:16,945 | INFO     | [data] copytool_in thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:17,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-04 07:42:35] 2024-10-04 05:31:17,057 | INFO     | [data] control thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:17,074 | INFO     | [job] validate thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:17,318 | INFO     | [job] queue monitor thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:17,435 | INFO     | [payload] execute_payloads thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:17,513 | INFO     | [job] control thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:17,658 | INFO     | [payload] validate_pre thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:17,721 | INFO     | [payload] control thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:17,824 | INFO     | [job] create_data_payload thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:18,341 | INFO     | [data] copytool_out thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:21,051 | INFO     | [data] queue_monitor thread has finished
[2024-10-04 07:42:35] 2024-10-04 05:31:21,913 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953801619264)>', '<ExcThread(monitor, started 139953346422528)>']
[2024-10-04 07:42:35] 2024-10-04 05:31:22,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-04 07:42:35] 2024-10-04 05:31:22,900 | INFO     | [monitor] control thread has ended
[2024-10-04 07:42:35] 2024-10-04 05:31:26,939 | INFO     | all workflow threads have been joined
[2024-10-04 07:42:35] 2024-10-04 05:31:26,939 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-04 07:42:35] 2024-10-04 05:31:26,940 | INFO     | traces error code: 0
[2024-10-04 07:42:35] 2024-10-04 05:31:26,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-04 07:42:35] 2024-10-04 05:31:27,245 [wrapper] ==== pilot stdout END ====
[2024-10-04 07:42:35] 2024-10-04 05:31:27,327 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-04 07:42:35] 2024-10-04 05:31:27,429 [wrapper] pilotpid: 4624
[2024-10-04 07:42:35] 2024-10-04 05:31:27,474 [wrapper] Pilot exit status: 0
[2024-10-04 07:42:35] 2024-10-04 05:31:27,984 [wrapper] pandaids: 6353993878
[2024-10-04 07:42:35] 2024-10-04 05:31:28,912 [wrapper] cleanup supervisor_pilot 12077 4625
[2024-10-04 07:42:35] 2024-10-04 05:31:29,024 [wrapper] Test setup, not cleaning
[2024-10-04 07:42:35] 2024-10-04 05:31:29,121 [wrapper] ==== wrapper stdout END ====
[2024-10-04 07:42:35] 2024-10-04 05:31:29,207 [wrapper] ==== wrapper stderr END ====
[2024-10-04 07:42:35] 2024-10-04 05:31:29,372 [wrapper] apfmon messages muted
[2024-10-04 07:42:35]  *** Error codes and diagnostics ***
[2024-10-04 07:42:35]     "exeErrorCode": 0,
[2024-10-04 07:42:35]     "exeErrorDiag": "",
[2024-10-04 07:42:35]     "pilotErrorCode": 0,
[2024-10-04 07:42:35]     "pilotErrorDiag": "",
[2024-10-04 07:42:35]  *** Listing of results directory ***
[2024-10-04 07:42:35] total 899136
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc    484599 Oct  2 10:55 pilot3.tar.gz
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc      5653 Oct  2 10:57 queuedata.json
[2024-10-04 07:42:35] -rwx------. 1 boinc boinc     33814 Oct  2 10:57 runpilot2-wrapper.sh
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc       100 Oct  4 00:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-04 07:42:35] -rwxr-xr-x. 1 boinc boinc      7986 Oct  4 00:48 run_atlas
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc       105 Oct  4 00:48 job.xml
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc      6345 Oct  4 00:48 init_data.xml
[2024-10-04 07:42:35] -rw-r--r--. 2 boinc boinc 645920790 Oct  4 00:48 EVNT.41466530._000003.pool.root.1
[2024-10-04 07:42:35] -rw-r--r--. 2 boinc boinc     17537 Oct  4 00:48 start_atlas.sh
[2024-10-04 07:42:35] drwxrwx--x. 2 boinc boinc        68 Oct  4 00:48 shared
[2024-10-04 07:42:35] -rw-r--r--. 2 boinc boinc    498156 Oct  4 00:48 input.tar.gz
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc         0 Oct  4 00:48 boinc_lockfile
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc      2531 Oct  4 00:48 pandaJob.out
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc       424 Oct  4 00:48 setup.sh.local
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc   1024534 Oct  4 00:49 agis_schedconf.cvmfs.json
[2024-10-04 07:42:35] drwx------. 4 boinc boinc      4096 Oct  4 00:49 pilot3
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc 265492984 Oct  4 07:28 HITS.41481181._000149.pool.root.1
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc       532 Oct  4 07:28 boinc_task_state.xml
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc      1018 Oct  4 07:29 memory_monitor_summary.json
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc   1615815 Oct  4 07:29 agis_ddmendpoints.agis.ALL.json
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc    521045 Oct  4 07:29 log.41481181._000149.job.log.tgz.1
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc        95 Oct  4 07:30 pilot_heartbeat.json
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc      7692 Oct  4 07:31 heartbeat.json
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc      4274 Oct  4 07:31 pilotlog.txt
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc   2203408 Oct  4 07:31 log.41481181._000149.job.log.1
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc       357 Oct  4 07:31 output.list
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc       620 Oct  4 07:31 runtime_log
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc   2744320 Oct  4 07:31 result.tar.gz
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc     10999 Oct  4 07:31 runtime_log.err
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc       646 Oct  4 07:31 Gx7KDmDMAG6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmxQnKDmq2442n.diag
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc      8192 Oct  4 07:42 boinc_mmap_file
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc        28 Oct  4 07:42 wrapper_checkpoint.txt
[2024-10-04 07:42:35] -rw-r--r--. 1 boinc boinc     21496 Oct  4 07:42 stderr.txt
[2024-10-04 07:42:35] HITS file was successfully produced:
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc 265492984 Oct  4 07:28 shared/HITS.pool.root.1
[2024-10-04 07:42:35]  *** Contents of shared directory: ***
[2024-10-04 07:42:35] total 893244
[2024-10-04 07:42:35] -rw-r--r--. 2 boinc boinc 645920790 Oct  4 00:48 ATLAS.root_0
[2024-10-04 07:42:35] -rw-r--r--. 2 boinc boinc     17537 Oct  4 00:48 start_atlas.sh
[2024-10-04 07:42:35] -rw-r--r--. 2 boinc boinc    498156 Oct  4 00:48 input.tar.gz
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc 265492984 Oct  4 07:28 HITS.pool.root.1
[2024-10-04 07:42:35] -rw-------. 1 boinc boinc   2744320 Oct  4 07:31 result.tar.gz
07:42:37 (31795): run_atlas exited; CPU time 89485.912684
07:42:37 (31795): called boinc_finish(0)

</stderr_txt>
]]>

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