Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:48:08 (9341): wrapper (7.7.26015): starting
13:48:08 (9341): wrapper: running run_atlas (--nthreads 8)
[2024-10-03 13:48:08] Arguments: --nthreads 8
[2024-10-03 13:48:08] Threads: 8
[2024-10-03 13:48:08] Checking for CVMFS
[2024-10-03 13:48:08] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-03 13:48:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-03 13:48:08] Running cvmfs_config stat atlas.cern.ch
[2024-10-03 13:48:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-03 13:48:08] 2.11.2.0 7380 84718 82548 137926 1 199 13331798 25165825 3445 130560 0 57873425 99.926 31459457 8739 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-03 13:48:08] CVMFS is ok
[2024-10-03 13:48:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-03 13:48:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-03 13:48:08] Further information can be found at the LHC@home message board.
[2024-10-03 13:48:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-03 13:48:08] Checking for apptainer binary...
[2024-10-03 13:48:08] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-03 13:48:08] Running /usr/bin/apptainer --version
[2024-10-03 13:48:08] apptainer version 1.3.2-1.el7
[2024-10-03 13:48:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-03 13:48:10] cg-vwn329.simple-grid.lan
[2024-10-03 13:48:10] apptainer works
[2024-10-03 13:48:10] Set ATHENA_PROC_NUMBER=8
[2024-10-03 13:48:10] Set ATHENA_CORE_NUMBER=8
[2024-10-03 13:48:10] Starting ATLAS job with PandaID=6353941643
[2024-10-03 13:48:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-03 20:44:12]  *** The last 200 lines of the pilot log: ***
[2024-10-03 20:44:12] 2024-10-03 18:43:49,061 | INFO     | chi2: 4.386541546178656
[2024-10-03 20:44:12] 2024-10-03 18:43:49,061 | INFO     | model: linear, x: [1727956182.0, 1727956243.0, 1727956304.0, 1727956365.0, 1727956426.0, 1727956487.0, 1727956548.0, 1727956609.0, 1727956670.0, 1727956731.0, 1727
[2024-10-03 20:44:12] 2024-10-03 18:43:49,062 | INFO     | sum of square deviations: 20144379560.5
[2024-10-03 20:44:12] 2024-10-03 18:43:49,066 | INFO     | sum of deviations: 208290688633.0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,066 | INFO     | mean x: 1727968412.5
[2024-10-03 20:44:12] 2024-10-03 18:43:49,066 | INFO     | mean y: 2498051.154228856
[2024-10-03 20:44:12] 2024-10-03 18:43:49,067 | INFO     | -- intersect: -17864506961.074768
[2024-10-03 20:44:12] 2024-10-03 18:43:49,067 | INFO     | intersect: -17864506961.074768
[2024-10-03 20:44:12] 2024-10-03 18:43:49,067 | INFO     | chi2: 4.387672331332193
[2024-10-03 20:44:12] 2024-10-03 18:43:49,067 | INFO     | current chi2=4.387672331332193 (change=-0.025778512334433307 %)
[2024-10-03 20:44:12] 2024-10-03 18:43:49,068 | INFO     | right removable region: 401
[2024-10-03 20:44:12] 2024-10-03 18:43:49,068 | INFO     | model: linear, x: [1727956487.0, 1727956548.0, 1727956609.0, 1727956670.0, 1727956731.0, 1727956792.0, 1727956853.0, 1727956914.0, 1727956975.0, 1727957036.0, 1727
[2024-10-03 20:44:12] 2024-10-03 18:43:49,068 | INFO     | sum of square deviations: 20144379560.5
[2024-10-03 20:44:12] 2024-10-03 18:43:49,073 | INFO     | sum of deviations: 103818976382.5
[2024-10-03 20:44:12] 2024-10-03 18:43:49,074 | INFO     | mean x: 1727968717.5
[2024-10-03 20:44:12] 2024-10-03 18:43:49,074 | INFO     | mean y: 2520194.65920398
[2024-10-03 20:44:12] 2024-10-03 18:43:49,074 | INFO     | -- intersect: -8902988308.744837
[2024-10-03 20:44:12] 2024-10-03 18:43:49,074 | INFO     | intersect: -8902988308.744837
[2024-10-03 20:44:12] 2024-10-03 18:43:49,075 | INFO     | chi2: 1.696235184376732
[2024-10-03 20:44:12] 2024-10-03 18:43:49,075 | INFO     | current chi2=1.696235184376732 (change=61.33092171771608 %)
[2024-10-03 20:44:12] 2024-10-03 18:43:49,076 | INFO     | model: linear, x: [1727956792.0, 1727956853.0, 1727956914.0, 1727956975.0, 1727957036.0, 1727957097.0, 1727957158.0, 1727957219.0, 1727957280.0, 1727957341.0, 1727
[2024-10-03 20:44:12] 2024-10-03 18:43:49,076 | INFO     | sum of square deviations: 19402030758.0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,087 | INFO     | sum of deviations: 26841642607.999992
[2024-10-03 20:44:12] 2024-10-03 18:43:49,087 | INFO     | mean x: 1727968870.0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,087 | INFO     | mean y: 2536008.0680100755
[2024-10-03 20:44:12] 2024-10-03 18:43:49,088 | INFO     | -- intersect: -2388013900.0731883
[2024-10-03 20:44:12] 2024-10-03 18:43:49,088 | INFO     | intersect: -2388013900.0731883
[2024-10-03 20:44:12] 2024-10-03 18:43:49,088 | INFO     | chi2: 0.43776071827386925
[2024-10-03 20:44:12] 2024-10-03 18:43:49,088 | INFO     | current chi2=0.43776071827386925 (change=74.19221566054705 %)
[2024-10-03 20:44:12] 2024-10-03 18:43:49,089 | INFO     | model: linear, x: [1727957097.0, 1727957158.0, 1727957219.0, 1727957280.0, 1727957341.0, 1727957402.0, 1727957463.0, 1727957524.0, 1727957585.0, 1727957646.0, 1727
[2024-10-03 20:44:12] 2024-10-03 18:43:49,089 | INFO     | sum of square deviations: 18678147418.0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,094 | INFO     | sum of deviations: -4428408490.499997
[2024-10-03 20:44:12] 2024-10-03 18:43:49,094 | INFO     | mean x: 1727969022.5
[2024-10-03 20:44:12] 2024-10-03 18:43:49,094 | INFO     | mean y: 2542562.7066326533
[2024-10-03 20:44:12] 2024-10-03 18:43:49,094 | INFO     | -- intersect: 412227341.3579487
[2024-10-03 20:44:12] 2024-10-03 18:43:49,094 | INFO     | intersect: 412227341.3579487
[2024-10-03 20:44:12] 2024-10-03 18:43:49,095 | INFO     | chi2: 0.10648763700705678
[2024-10-03 20:44:12] 2024-10-03 18:43:49,095 | INFO     | current chi2=0.10648763700705678 (change=75.674464938986 %)
[2024-10-03 20:44:12] 2024-10-03 18:43:49,096 | INFO     | model: linear, x: [1727957402.0, 1727957463.0, 1727957524.0, 1727957585.0, 1727957646.0, 1727957707.0, 1727957768.0, 1727957829.0, 1727957890.0, 1727957951.0, 1727
[2024-10-03 20:44:12] 2024-10-03 18:43:49,096 | INFO     | sum of square deviations: 17972496978.0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,101 | INFO     | sum of deviations: -2564120909.0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,101 | INFO     | mean x: 1727969175.0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,101 | INFO     | mean y: 2542148.4211886306
[2024-10-03 20:44:12] 2024-10-03 18:43:49,101 | INFO     | -- intersect: 249070045.86073717
[2024-10-03 20:44:12] 2024-10-03 18:43:49,101 | INFO     | intersect: 249070045.86073717
[2024-10-03 20:44:12] 2024-10-03 18:43:49,102 | INFO     | chi2: 0.09303430813663456
[2024-10-03 20:44:12] 2024-10-03 18:43:49,102 | INFO     | current chi2=0.09303430813663456 (change=12.63370025717698 %)
[2024-10-03 20:44:12] 2024-10-03 18:43:49,102 | INFO     | left removable region: 40
[2024-10-03 20:44:12] 2024-10-03 18:43:49,103 | INFO     | model: linear, x: [1727958622.0, 1727958683.0, 1727958744.0, 1727958805.0, 1727958866.0, 1727958927.0, 1727958988.0, 1727959049.0, 1727959110.0, 1727959171.0, 1727
[2024-10-03 20:44:12] 2024-10-03 18:43:49,103 | INFO     | sum of square deviations: 14588031660.0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,112 | INFO     | sum of deviations: 21788545591.999996
[2024-10-03 20:44:12] 2024-10-03 18:43:49,113 | INFO     | mean x: 1727969602.0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,113 | INFO     | mean y: 2536316.3656509696
[2024-10-03 20:44:12] 2024-10-03 18:43:49,113 | INFO     | -- intersect: -2578342676.240476
[2024-10-03 20:44:12] 2024-10-03 18:43:49,113 | INFO     | intersect: -2578342676.240476
[2024-10-03 20:44:12] 2024-10-03 18:43:49,114 | INFO     | chi2: 0.0014119186253589708
[2024-10-03 20:44:12] 2024-10-03 18:43:49,114 | INFO     | -- intersect: -2578342676.240476
[2024-10-03 20:44:12] 2024-10-03 18:43:49,114 | INFO     | current memory leak: 1.49 B/s (using 361 data points, chi2=0.00)
[2024-10-03 20:44:12] 2024-10-03 18:43:49,115 | INFO     | ..............................
[2024-10-03 20:44:12] 2024-10-03 18:43:49,115 | INFO     | . Timing measurements:
[2024-10-03 20:44:12] 2024-10-03 18:43:49,115 | INFO     | . get job = 0 s
[2024-10-03 20:44:12] 2024-10-03 18:43:49,115 | INFO     | . initial setup = 2 s
[2024-10-03 20:44:12] 2024-10-03 18:43:49,115 | INFO     | . payload setup = 25 s
[2024-10-03 20:44:12] 2024-10-03 18:43:49,115 | INFO     | . stage-in = 0 s
[2024-10-03 20:44:12] 2024-10-03 18:43:49,115 | INFO     | . payload execution = 24837 s
[2024-10-03 20:44:12] 2024-10-03 18:43:49,116 | INFO     | . stage-out = 3 s
[2024-10-03 20:44:12] 2024-10-03 18:43:49,116 | INFO     | . log creation = 0 s
[2024-10-03 20:44:12] 2024-10-03 18:43:49,116 | INFO     | ..............................
[2024-10-03 20:44:12] 2024-10-03 18:43:49,389 | INFO     | 
[2024-10-03 20:44:12] 2024-10-03 18:43:49,390 | INFO     | job summary report
[2024-10-03 20:44:12] 2024-10-03 18:43:49,390 | INFO     | --------------------------------------------------
[2024-10-03 20:44:12] 2024-10-03 18:43:49,390 | INFO     | PanDA job id: 6353941643
[2024-10-03 20:44:12] 2024-10-03 18:43:49,390 | INFO     | task id: 41481123
[2024-10-03 20:44:12] 2024-10-03 18:43:49,390 | INFO     | errors: (none)
[2024-10-03 20:44:12] 2024-10-03 18:43:49,390 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-03 20:44:12] 2024-10-03 18:43:49,390 | INFO     | pilot state: finished 
[2024-10-03 20:44:12] 2024-10-03 18:43:49,390 | INFO     | transexitcode: 0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | exeerrorcode: 0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | exeerrordiag: 
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | exitcode: 0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | exitmsg: OK
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | cpuconsumptiontime: 92631 s
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | nevents: 400
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | neventsw: 0
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | pid: 24022
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | pgrp: 24022
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | corecount: 8
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | event service: False
[2024-10-03 20:44:12] 2024-10-03 18:43:49,391 | INFO     | sizes: {0: 2435263, 1: 2435462, 2: 2435462, 10: 2435696, 12: 2435724, 24866: 2470730, 24870: 2479754, 24872: 2479810, 24900: 2479980}
[2024-10-03 20:44:12] 2024-10-03 18:43:49,392 | INFO     | --------------------------------------------------
[2024-10-03 20:44:12] 2024-10-03 18:43:49,392 | INFO     | 
[2024-10-03 20:44:12] 2024-10-03 18:43:49,392 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-03 20:44:12] 2024-10-03 18:43:49,533 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,533 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,533 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,534 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,535 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-03 20:44:12] 2024-10-03 18:43:49,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,535 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-03 20:44:12] 2024-10-03 18:43:49,535 | INFO     | job 6353941643 has completed (purged errors)
[2024-10-03 20:44:12] 2024-10-03 18:43:49,536 | INFO     | overall cleanup function is called
[2024-10-03 20:44:12] 2024-10-03 18:43:50,543 | INFO     | --- collectZombieJob: --- 10, [24022]
[2024-10-03 20:44:12] 2024-10-03 18:43:50,544 | INFO     | zombie collector waiting for pid 24022
[2024-10-03 20:44:12] 2024-10-03 18:43:50,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-03 20:44:12] 2024-10-03 18:43:50,544 | INFO     | collected zombie processes
[2024-10-03 20:44:12] 2024-10-03 18:43:50,544 | INFO     | will  attempt to kill all subprocesses of pid=24022
[2024-10-03 20:44:12] 2024-10-03 18:43:51,207 | INFO     | process IDs to be killed: [24022] (in reverse order)
[2024-10-03 20:44:12] 2024-10-03 18:43:51,926 | WARNING  | found no corresponding commands to process id(s)
[2024-10-03 20:44:12] 2024-10-03 18:43:51,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-03 20:44:12] 2024-10-03 18:43:51,931 | INFO     | did not find any defunct processes belonging to 24022
[2024-10-03 20:44:12] 2024-10-03 18:43:51,934 | INFO     | did not find any defunct processes belonging to 24022
[2024-10-03 20:44:12] 2024-10-03 18:43:51,935 | INFO     | ready for new job
[2024-10-03 20:44:12] 2024-10-03 18:43:51,935 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-03 20:44:12] 2024-10-03 18:43:51,937 | INFO     | *************************************
[2024-10-03 20:44:12] 2024-10-03 18:43:51,937 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-03 20:44:12] 2024-10-03 18:43:51,938 | INFO     | *************************************
[2024-10-03 20:44:12] 2024-10-03 18:43:51,938 | INFO     | 
[2024-10-03 20:44:12] 2024-10-03 18:43:51,938 | INFO     | pilot is running in a VM
[2024-10-03 20:44:12] 2024-10-03 18:43:51,939 | INFO     | architecture information:
[2024-10-03 20:44:12] 2024-10-03 18:43:51,939 | INFO     | executing command: cat /etc/os-release
[2024-10-03 20:44:12] 2024-10-03 18:43:52,201 | INFO     | cat /etc/os-release:
[2024-10-03 20:44:12] NAME="CentOS Linux"
[2024-10-03 20:44:12] VERSION="7 (Core)"
[2024-10-03 20:44:12] ID="centos"
[2024-10-03 20:44:12] ID_LIKE="rhel fedora"
[2024-10-03 20:44:12] VERSION_ID="7"
[2024-10-03 20:44:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-03 20:44:12] ANSI_COLOR="0;31"
[2024-10-03 20:44:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-03 20:44:12] HOME_URL="https://www.centos.org/"
[2024-10-03 20:44:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-03 20:44:12] 
[2024-10-03 20:44:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-03 20:44:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-03 20:44:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-03 20:44:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-03 20:44:12] 
[2024-10-03 20:44:12] 2024-10-03 18:43:52,202 | INFO     | *************************************
[2024-10-03 20:44:12] 2024-10-03 18:43:52,705 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-03 20:44:12] 2024-10-03 18:43:52,886 | INFO     | sufficient remaining disk space (488610201600 B)
[2024-10-03 20:44:12] 2024-10-03 18:43:52,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-03 20:44:12] 2024-10-03 18:43:52,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-03 20:44:12] 2024-10-03 18:43:52,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-03 20:44:12] 2024-10-03 18:43:52,892 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-03 20:44:12] 2024-10-03 18:43:52,893 | INFO     | aborting loop
[2024-10-03 20:44:12] 2024-10-03 18:43:53,281 | INFO     | all data control threads have been joined
[2024-10-03 20:44:12] 2024-10-03 18:43:53,581 | INFO     | found 0 job(s) in 20 queues
[2024-10-03 20:44:12] 2024-10-03 18:43:53,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-03 20:44:12] 2024-10-03 18:43:53,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-03 20:44:12] 2024-10-03 18:43:53,893 | INFO     | [job] retrieve thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:53,899 | INFO     | [job] job monitor thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:53,942 | INFO     | all job control threads have been joined
[2024-10-03 20:44:12] 2024-10-03 18:43:53,961 | INFO     | [job] validate thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:54,029 | INFO     | [data] copytool_in thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:54,029 | INFO     | [job] create_data_payload thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:54,184 | INFO     | all payload control threads have been joined
[2024-10-03 20:44:12] 2024-10-03 18:43:54,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-03 20:44:12] 2024-10-03 18:43:54,289 | INFO     | [data] control thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:54,296 | INFO     | [payload] execute_payloads thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:54,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-03 20:44:12] 2024-10-03 18:43:54,803 | INFO     | [payload] validate_pre thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:54,897 | INFO     | [data] copytool_out thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:54,949 | INFO     | [job] control thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:55,190 | INFO     | [payload] control thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:55,292 | INFO     | [job] queue monitor thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:55,364 | INFO     | [payload] validate_post thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:55,471 | INFO     | [payload] failed_post thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:43:58,740 | INFO     | [data] queue_monitor thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:44:03,781 | INFO     | job.realtimelogging is not enabled
[2024-10-03 20:44:12] 2024-10-03 18:44:04,787 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-03 20:44:12] 2024-10-03 18:44:05,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804818589504)>', '<ExcThread(monitor, started 139804373137152)>']
[2024-10-03 20:44:12] 2024-10-03 18:44:06,655 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-03 20:44:12] 2024-10-03 18:44:06,656 | INFO     | [monitor] control thread has ended
[2024-10-03 20:44:12] 2024-10-03 18:44:10,676 | INFO     | all workflow threads have been joined
[2024-10-03 20:44:12] 2024-10-03 18:44:10,677 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-03 20:44:12] 2024-10-03 18:44:10,677 | INFO     | traces error code: 0
[2024-10-03 20:44:12] 2024-10-03 18:44:10,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-03 20:44:12] 2024-10-03 18:44:10,912 [wrapper] ==== pilot stdout END ====
[2024-10-03 20:44:12] 2024-10-03 18:44:10,923 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-03 20:44:12] 2024-10-03 18:44:10,927 [wrapper] pilotpid: 13090
[2024-10-03 20:44:12] 2024-10-03 18:44:10,959 [wrapper] Pilot exit status: 0
[2024-10-03 20:44:12] 2024-10-03 18:44:11,014 [wrapper] pandaids: 6353941643
[2024-10-03 20:44:12] 2024-10-03 18:44:11,143 [wrapper] cleanup supervisor_pilot   906 13091
[2024-10-03 20:44:12] 2024-10-03 18:44:11,224 [wrapper] Test setup, not cleaning
[2024-10-03 20:44:12] 2024-10-03 18:44:11,310 [wrapper] ==== wrapper stdout END ====
[2024-10-03 20:44:12] 2024-10-03 18:44:11,324 [wrapper] ==== wrapper stderr END ====
[2024-10-03 20:44:12] 2024-10-03 18:44:11,556 [wrapper] apfmon messages muted
[2024-10-03 20:44:12]  *** Error codes and diagnostics ***
[2024-10-03 20:44:12]     "exeErrorCode": 0,
[2024-10-03 20:44:12]     "exeErrorDiag": "",
[2024-10-03 20:44:12]     "pilotErrorCode": 0,
[2024-10-03 20:44:12]     "pilotErrorDiag": "",
[2024-10-03 20:44:12]  *** Listing of results directory ***
[2024-10-03 20:44:12] total 806912
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc    484599 Oct  2 08:02 pilot3.tar.gz
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc      5653 Oct  2 08:05 queuedata.json
[2024-10-03 20:44:12] -rwx------. 1 boinc boinc     33814 Oct  2 08:06 runpilot2-wrapper.sh
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc       100 Oct  3 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-03 20:44:12] -rwxr-xr-x. 1 boinc boinc      7986 Oct  3 13:48 run_atlas
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc       105 Oct  3 13:48 job.xml
[2024-10-03 20:44:12] -rw-r--r--. 2 boinc boinc 589608245 Oct  3 13:48 EVNT.41481121._000014.pool.root.1
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc      6345 Oct  3 13:48 init_data.xml
[2024-10-03 20:44:12] -rw-r--r--. 2 boinc boinc     17537 Oct  3 13:48 start_atlas.sh
[2024-10-03 20:44:12] drwxrwx--x. 2 boinc boinc        68 Oct  3 13:48 shared
[2024-10-03 20:44:12] -rw-r--r--. 2 boinc boinc    498163 Oct  3 13:48 input.tar.gz
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc         0 Oct  3 13:48 boinc_lockfile
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc      2536 Oct  3 13:48 pandaJob.out
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc       424 Oct  3 13:48 setup.sh.local
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc   1024595 Oct  3 13:48 agis_schedconf.cvmfs.json
[2024-10-03 20:44:12] drwx------. 4 boinc boinc      4096 Oct  3 13:48 pilot3
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc 227261201 Oct  3 20:42 HITS.41481123._000532.pool.root.1
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc       532 Oct  3 20:42 boinc_task_state.xml
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc      1015 Oct  3 20:43 memory_monitor_summary.json
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc   1615815 Oct  3 20:43 agis_ddmendpoints.agis.ALL.json
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc    501285 Oct  3 20:43 log.41481123._000532.job.log.tgz.1
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc        95 Oct  3 20:43 pilot_heartbeat.json
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc      7686 Oct  3 20:43 heartbeat.json
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc      8192 Oct  3 20:44 boinc_mmap_file
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc        28 Oct  3 20:44 wrapper_checkpoint.txt
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc      4346 Oct  3 20:44 pilotlog.txt
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc   2271763 Oct  3 20:44 log.41481123._000532.job.log.1
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc       357 Oct  3 20:44 output.list
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc       620 Oct  3 20:44 runtime_log
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc   2795520 Oct  3 20:44 result.tar.gz
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc     10999 Oct  3 20:44 runtime_log.err
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc       646 Oct  3 20:44 pOoMDm7f7F6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmKOnKDmtAnnkm.diag
[2024-10-03 20:44:12] -rw-r--r--. 1 boinc boinc     21501 Oct  3 20:44 stderr.txt
[2024-10-03 20:44:12] HITS file was successfully produced:
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc 227261201 Oct  3 20:42 shared/HITS.pool.root.1
[2024-10-03 20:44:12]  *** Contents of shared directory: ***
[2024-10-03 20:44:12] total 800968
[2024-10-03 20:44:12] -rw-r--r--. 2 boinc boinc 589608245 Oct  3 13:48 ATLAS.root_0
[2024-10-03 20:44:12] -rw-r--r--. 2 boinc boinc     17537 Oct  3 13:48 start_atlas.sh
[2024-10-03 20:44:12] -rw-r--r--. 2 boinc boinc    498163 Oct  3 13:48 input.tar.gz
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc 227261201 Oct  3 20:42 HITS.pool.root.1
[2024-10-03 20:44:12] -rw-------. 1 boinc boinc   2795520 Oct  3 20:44 result.tar.gz
20:44:13 (9341): run_atlas exited; CPU time 92526.704607
20:44:13 (9341): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN