Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:32:45 (12645): wrapper (7.7.26015): starting
14:32:45 (12645): wrapper: running run_atlas (--nthreads 8)
[2024-10-02 14:32:45] Arguments: --nthreads 8
[2024-10-02 14:32:45] Threads: 8
[2024-10-02 14:32:45] Checking for CVMFS
[2024-10-02 14:32:46] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-02 14:32:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-02 14:32:46] Running cvmfs_config stat atlas.cern.ch
[2024-10-02 14:32:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-02 14:32:47] 2.11.2.0 6297 52821 69108 137890 0 16 15529095 25165825 3967 130560 0 35146733 99.943 17883086 9036 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-02 14:32:47] CVMFS is ok
[2024-10-02 14:32:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-02 14:32:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-02 14:32:47] Further information can be found at the LHC@home message board.
[2024-10-02 14:32:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-02 14:32:47] Checking for apptainer binary...
[2024-10-02 14:32:47] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-02 14:32:47] Running /usr/bin/apptainer --version
[2024-10-02 14:32:47] apptainer version 1.3.2-1.el7
[2024-10-02 14:32:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-02 14:32:52] cg-vwn238.simple-grid.lan
[2024-10-02 14:32:52] apptainer works
[2024-10-02 14:32:52] Set ATHENA_PROC_NUMBER=8
[2024-10-02 14:32:52] Set ATHENA_CORE_NUMBER=8
[2024-10-02 14:32:52] Starting ATLAS job with PandaID=6353892504
[2024-10-02 14:32:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-02 21:43:14]  *** The last 200 lines of the pilot log: ***
[2024-10-02 21:43:14] 2024-10-02 19:41:18,192 | INFO     | model: linear, x: [1727873359.0, 1727873420.0, 1727873481.0, 1727873542.0, 1727873603.0, 1727873664.0, 1727873725.0, 1727873786.0, 1727873847.0, 1727873908.0, 1727
[2024-10-02 21:43:14] 2024-10-02 19:41:18,192 | INFO     | sum of square deviations: 20446541505.0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,197 | INFO     | sum of deviations: 185192851241.0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,198 | INFO     | mean x: 1727885650.5
[2024-10-02 21:43:14] 2024-10-02 19:41:18,198 | INFO     | mean y: 2489448.2524752477
[2024-10-02 21:43:14] 2024-10-02 19:41:18,198 | INFO     | -- intersect: -15647691300.225409
[2024-10-02 21:43:14] 2024-10-02 19:41:18,198 | INFO     | intersect: -15647691300.225409
[2024-10-02 21:43:14] 2024-10-02 19:41:18,199 | INFO     | chi2: 4.401565701462153
[2024-10-02 21:43:14] 2024-10-02 19:41:18,199 | INFO     | current chi2=4.401565701462153 (change=51.50662868907706 %)
[2024-10-02 21:43:14] 2024-10-02 19:41:18,200 | INFO     | model: linear, x: [1727873664.0, 1727873725.0, 1727873786.0, 1727873847.0, 1727873908.0, 1727873969.0, 1727874030.0, 1727874091.0, 1727874152.0, 1727874213.0, 1727
[2024-10-02 21:43:14] 2024-10-02 19:41:18,200 | INFO     | sum of square deviations: 19696741400.0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,217 | INFO     | sum of deviations: 91144020470.00002
[2024-10-02 21:43:14] 2024-10-02 19:41:18,218 | INFO     | mean x: 1727885803.0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,218 | INFO     | mean y: 2508558.4285714286
[2024-10-02 21:43:14] 2024-10-02 19:41:18,218 | INFO     | -- intersect: -7993050493.712633
[2024-10-02 21:43:14] 2024-10-02 19:41:18,218 | INFO     | intersect: -7993050493.712633
[2024-10-02 21:43:14] 2024-10-02 19:41:18,219 | INFO     | chi2: 2.4337614634895752
[2024-10-02 21:43:14] 2024-10-02 19:41:18,219 | INFO     | current chi2=2.4337614634895752 (change=44.70691502614386 %)
[2024-10-02 21:43:14] 2024-10-02 19:41:18,219 | INFO     | model: linear, x: [1727873969.0, 1727874030.0, 1727874091.0, 1727874152.0, 1727874213.0, 1727874274.0, 1727874335.0, 1727874396.0, 1727874457.0, 1727874518.0, 1727
[2024-10-02 21:43:14] 2024-10-02 19:41:18,220 | INFO     | sum of square deviations: 18965499782.5
[2024-10-02 21:43:14] 2024-10-02 19:41:18,225 | INFO     | sum of deviations: 15448606544.999977
[2024-10-02 21:43:14] 2024-10-02 19:41:18,225 | INFO     | mean x: 1727885955.5
[2024-10-02 21:43:14] 2024-10-02 19:41:18,225 | INFO     | mean y: 2524344.69035533
[2024-10-02 21:43:14] 2024-10-02 19:41:18,225 | INFO     | -- intersect: -1404948729.4324589
[2024-10-02 21:43:14] 2024-10-02 19:41:18,225 | INFO     | intersect: -1404948729.4324589
[2024-10-02 21:43:14] 2024-10-02 19:41:18,234 | INFO     | chi2: 1.2005324792445238
[2024-10-02 21:43:14] 2024-10-02 19:41:18,235 | INFO     | current chi2=1.2005324792445238 (change=50.67172780675159 %)
[2024-10-02 21:43:14] 2024-10-02 19:41:18,235 | INFO     | model: linear, x: [1727874274.0, 1727874335.0, 1727874396.0, 1727874457.0, 1727874518.0, 1727874579.0, 1727874640.0, 1727874701.0, 1727874762.0, 1727874823.0, 1727
[2024-10-02 21:43:14] 2024-10-02 19:41:18,236 | INFO     | sum of square deviations: 18252584090.0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,241 | INFO     | sum of deviations: -16316715662.0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,241 | INFO     | mean x: 1727886108.0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,241 | INFO     | mean y: 2531107.2365038563
[2024-10-02 21:43:14] 2024-10-02 19:41:18,241 | INFO     | -- intersect: 1547157675.2632244
[2024-10-02 21:43:14] 2024-10-02 19:41:18,241 | INFO     | intersect: 1547157675.2632244
[2024-10-02 21:43:14] 2024-10-02 19:41:18,242 | INFO     | chi2: 0.8686295692263988
[2024-10-02 21:43:14] 2024-10-02 19:41:18,242 | INFO     | current chi2=0.8686295692263988 (change=27.64630826372863 %)
[2024-10-02 21:43:14] 2024-10-02 19:41:18,243 | INFO     | model: linear, x: [1727874579.0, 1727874640.0, 1727874701.0, 1727874762.0, 1727874823.0, 1727874884.0, 1727874945.0, 1727875006.0, 1727875067.0, 1727875128.0, 1727
[2024-10-02 21:43:14] 2024-10-02 19:41:18,243 | INFO     | sum of square deviations: 17557761760.0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,248 | INFO     | sum of deviations: -13512862617.999989
[2024-10-02 21:43:14] 2024-10-02 19:41:18,248 | INFO     | mean x: 1727886260.5
[2024-10-02 21:43:14] 2024-10-02 19:41:18,248 | INFO     | mean y: 2530480.0729166665
[2024-10-02 21:43:14] 2024-10-02 19:41:18,249 | INFO     | -- intersect: 1332352012.955263
[2024-10-02 21:43:14] 2024-10-02 19:41:18,249 | INFO     | intersect: 1332352012.955263
[2024-10-02 21:43:14] 2024-10-02 19:41:18,249 | INFO     | chi2: 0.8530564427384717
[2024-10-02 21:43:14] 2024-10-02 19:41:18,250 | INFO     | current chi2=0.8530564427384717 (change=1.7928386322142478 %)
[2024-10-02 21:43:14] 2024-10-02 19:41:18,250 | INFO     | left removable region: 50
[2024-10-02 21:43:14] 2024-10-02 19:41:18,250 | INFO     | model: linear, x: [1727876104.0, 1727876165.0, 1727876226.0, 1727876287.0, 1727876348.0, 1727876409.0, 1727876470.0, 1727876531.0, 1727876592.0, 1727876653.0, 1727
[2024-10-02 21:43:14] 2024-10-02 19:41:18,250 | INFO     | sum of square deviations: 13639518992.0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,254 | INFO     | sum of deviations: 23682307123.000004
[2024-10-02 21:43:14] 2024-10-02 19:41:18,255 | INFO     | mean x: 1727886840.0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,255 | INFO     | mean y: 2533599.5467422097
[2024-10-02 21:43:14] 2024-10-02 19:41:18,255 | INFO     | -- intersect: -2997597625.21793
[2024-10-02 21:43:14] 2024-10-02 19:41:18,255 | INFO     | intersect: -2997597625.21793
[2024-10-02 21:43:14] 2024-10-02 19:41:18,255 | INFO     | chi2: 0.0009605898181526474
[2024-10-02 21:43:14] 2024-10-02 19:41:18,256 | INFO     | -- intersect: -2997597625.21793
[2024-10-02 21:43:14] 2024-10-02 19:41:18,256 | INFO     | current memory leak: 1.74 B/s (using 353 data points, chi2=0.00)
[2024-10-02 21:43:14] 2024-10-02 19:41:18,257 | INFO     | ..............................
[2024-10-02 21:43:14] 2024-10-02 19:41:18,257 | INFO     | . Timing measurements:
[2024-10-02 21:43:14] 2024-10-02 19:41:18,257 | INFO     | . get job = 0 s
[2024-10-02 21:43:14] 2024-10-02 19:41:18,257 | INFO     | . initial setup = 9 s
[2024-10-02 21:43:14] 2024-10-02 19:41:18,257 | INFO     | . payload setup = 128 s
[2024-10-02 21:43:14] 2024-10-02 19:41:18,257 | INFO     | . stage-in = 0 s
[2024-10-02 21:43:14] 2024-10-02 19:41:18,258 | INFO     | . payload execution = 25084 s
[2024-10-02 21:43:14] 2024-10-02 19:41:18,258 | INFO     | . stage-out = 1 s
[2024-10-02 21:43:14] 2024-10-02 19:41:18,258 | INFO     | . log creation = 0 s
[2024-10-02 21:43:14] 2024-10-02 19:41:18,258 | INFO     | ..............................
[2024-10-02 21:43:14] 2024-10-02 19:41:18,432 | INFO     | 
[2024-10-02 21:43:14] 2024-10-02 19:41:18,433 | INFO     | job summary report
[2024-10-02 21:43:14] 2024-10-02 19:41:18,433 | INFO     | --------------------------------------------------
[2024-10-02 21:43:14] 2024-10-02 19:41:18,433 | INFO     | PanDA job id: 6353892504
[2024-10-02 21:43:14] 2024-10-02 19:41:18,433 | INFO     | task id: 41481123
[2024-10-02 21:43:14] 2024-10-02 19:41:18,433 | INFO     | errors: (none)
[2024-10-02 21:43:14] 2024-10-02 19:41:18,433 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-02 21:43:14] 2024-10-02 19:41:18,433 | INFO     | pilot state: finished 
[2024-10-02 21:43:14] 2024-10-02 19:41:18,433 | INFO     | transexitcode: 0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,433 | INFO     | exeerrorcode: 0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,433 | INFO     | exeerrordiag: 
[2024-10-02 21:43:14] 2024-10-02 19:41:18,434 | INFO     | exitcode: 0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,434 | INFO     | exitmsg: OK
[2024-10-02 21:43:14] 2024-10-02 19:41:18,434 | INFO     | cpuconsumptiontime: 91496 s
[2024-10-02 21:43:14] 2024-10-02 19:41:18,434 | INFO     | nevents: 400
[2024-10-02 21:43:14] 2024-10-02 19:41:18,434 | INFO     | neventsw: 0
[2024-10-02 21:43:14] 2024-10-02 19:41:18,434 | INFO     | pid: 31354
[2024-10-02 21:43:14] 2024-10-02 19:41:18,434 | INFO     | pgrp: 31354
[2024-10-02 21:43:14] 2024-10-02 19:41:18,434 | INFO     | corecount: 8
[2024-10-02 21:43:14] 2024-10-02 19:41:18,434 | INFO     | event service: False
[2024-10-02 21:43:14] 2024-10-02 19:41:18,434 | INFO     | sizes: {0: 2433926, 1: 2435462, 12: 2435462, 23: 2435490, 34: 2435518, 44: 2435546, 55: 2435702, 66: 2435730, 77: 2435758, 86: 2436020, 88: 2436048, 25223: 2471381
[2024-10-02 21:43:14] 2024-10-02 19:41:18,435 | INFO     | --------------------------------------------------
[2024-10-02 21:43:14] 2024-10-02 19:41:18,435 | INFO     | 
[2024-10-02 21:43:14] 2024-10-02 19:41:18,435 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2024-10-02 21:43:14] 2024-10-02 19:41:18,523 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,523 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,523 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,523 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,525 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-02 21:43:14] 2024-10-02 19:41:18,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,525 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-02 21:43:14] 2024-10-02 19:41:18,526 | INFO     | job 6353892504 has completed (purged errors)
[2024-10-02 21:43:14] 2024-10-02 19:41:18,526 | INFO     | overall cleanup function is called
[2024-10-02 21:43:14] 2024-10-02 19:41:19,535 | INFO     | --- collectZombieJob: --- 10, [31354]
[2024-10-02 21:43:14] 2024-10-02 19:41:19,536 | INFO     | zombie collector waiting for pid 31354
[2024-10-02 21:43:14] 2024-10-02 19:41:19,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-02 21:43:14] 2024-10-02 19:41:19,536 | INFO     | collected zombie processes
[2024-10-02 21:43:14] 2024-10-02 19:41:19,536 | INFO     | will  attempt to kill all subprocesses of pid=31354
[2024-10-02 21:43:14] 2024-10-02 19:41:20,331 | INFO     | process IDs to be killed: [31354] (in reverse order)
[2024-10-02 21:43:14] 2024-10-02 19:41:21,214 | WARNING  | found no corresponding commands to process id(s)
[2024-10-02 21:43:14] 2024-10-02 19:41:21,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-02 21:43:14] 2024-10-02 19:41:21,218 | INFO     | did not find any defunct processes belonging to 31354
[2024-10-02 21:43:14] 2024-10-02 19:41:21,221 | INFO     | did not find any defunct processes belonging to 31354
[2024-10-02 21:43:14] 2024-10-02 19:41:21,221 | INFO     | ready for new job
[2024-10-02 21:43:14] 2024-10-02 19:41:21,221 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-02 21:43:14] 2024-10-02 19:41:21,224 | INFO     | *************************************
[2024-10-02 21:43:14] 2024-10-02 19:41:21,224 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-02 21:43:14] 2024-10-02 19:41:21,224 | INFO     | *************************************
[2024-10-02 21:43:14] 2024-10-02 19:41:21,224 | INFO     | 
[2024-10-02 21:43:14] 2024-10-02 19:41:21,225 | INFO     | pilot is running in a VM
[2024-10-02 21:43:14] 2024-10-02 19:41:21,225 | INFO     | architecture information:
[2024-10-02 21:43:14] 2024-10-02 19:41:21,242 | INFO     | executing command: cat /etc/os-release
[2024-10-02 21:43:14] 2024-10-02 19:41:21,529 | INFO     | cat /etc/os-release:
[2024-10-02 21:43:14] NAME="CentOS Linux"
[2024-10-02 21:43:14] VERSION="7 (Core)"
[2024-10-02 21:43:14] ID="centos"
[2024-10-02 21:43:14] ID_LIKE="rhel fedora"
[2024-10-02 21:43:14] VERSION_ID="7"
[2024-10-02 21:43:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-02 21:43:14] ANSI_COLOR="0;31"
[2024-10-02 21:43:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-02 21:43:14] HOME_URL="https://www.centos.org/"
[2024-10-02 21:43:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-02 21:43:14] 
[2024-10-02 21:43:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-02 21:43:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-02 21:43:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-02 21:43:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-02 21:43:14] 
[2024-10-02 21:43:14] 2024-10-02 19:41:21,529 | INFO     | *************************************
[2024-10-02 21:43:14] 2024-10-02 19:41:22,039 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2024-10-02 21:43:14] 2024-10-02 19:41:22,255 | INFO     | sufficient remaining disk space (489149169664 B)
[2024-10-02 21:43:14] 2024-10-02 19:41:22,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-02 21:43:14] 2024-10-02 19:41:22,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-02 21:43:14] 2024-10-02 19:41:22,256 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-10-02 21:43:14] 2024-10-02 19:41:22,257 | INFO     | found 0 job(s) in 20 queues
[2024-10-02 21:43:14] 2024-10-02 19:41:22,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-02 21:43:14] 2024-10-02 19:41:22,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-02 21:43:14] 2024-10-02 19:41:22,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-02 21:43:14] 2024-10-02 19:41:22,370 | INFO     | all payload control threads have been joined
[2024-10-02 21:43:14] 2024-10-02 19:41:22,420 | INFO     | all data control threads have been joined
[2024-10-02 21:43:14] 2024-10-02 19:41:22,491 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-02 21:43:14] 2024-10-02 19:41:22,492 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-02 21:43:14] 2024-10-02 19:41:22,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-02 21:43:14] 2024-10-02 19:41:22,492 | INFO     | will abort loop
[2024-10-02 21:43:14] 2024-10-02 19:41:23,262 | INFO     | [job] retrieve thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:23,376 | INFO     | [payload] control thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:23,426 | INFO     | [data] control thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:23,441 | INFO     | [payload] failed_post thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:23,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-02 21:43:14] 2024-10-02 19:41:23,497 | INFO     | [job] job monitor thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:23,570 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:23,662 | INFO     | all job control threads have been joined
[2024-10-02 21:43:14] 2024-10-02 19:41:23,818 | INFO     | [payload] execute_payloads thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:23,869 | INFO     | [job] create_data_payload thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:23,968 | INFO     | [job] validate thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:23,975 | INFO     | [data] copytool_in thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:24,244 | INFO     | [payload] validate_pre thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:24,269 | INFO     | [data] copytool_out thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:24,356 | INFO     | [payload] validate_post thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:24,451 | INFO     | [job] queue monitor thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:24,668 | INFO     | [job] control thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:25,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-02 21:43:14] 2024-10-02 19:41:29,683 | INFO     | [data] queue_monitor thread has finished
[2024-10-02 21:43:14] 2024-10-02 19:41:30,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713614174016)>', '<ExcThread(monitor, started 139713155405568)>']
[2024-10-02 21:43:14] 2024-10-02 19:41:31,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-02 21:43:14] 2024-10-02 19:41:31,311 | INFO     | [monitor] control thread has ended
[2024-10-02 21:43:14] 2024-10-02 19:41:35,740 | INFO     | all workflow threads have been joined
[2024-10-02 21:43:14] 2024-10-02 19:41:35,741 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-02 21:43:14] 2024-10-02 19:41:35,741 | INFO     | traces error code: 0
[2024-10-02 21:43:14] 2024-10-02 19:41:35,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-02 21:43:14] 2024-10-02 19:41:36,086 [wrapper] ==== pilot stdout END ====
[2024-10-02 21:43:14] 2024-10-02 19:41:36,187 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-02 21:43:14] 2024-10-02 19:41:36,298 [wrapper] pilotpid: 21540
[2024-10-02 21:43:14] 2024-10-02 19:41:36,393 [wrapper] Pilot exit status: 0
[2024-10-02 21:43:14] 2024-10-02 19:41:36,987 [wrapper] pandaids: 6353892504
[2024-10-02 21:43:14] 2024-10-02 19:41:37,542 [wrapper] cleanup supervisor_pilot  1943 21541
[2024-10-02 21:43:14] 2024-10-02 19:41:37,595 [wrapper] Test setup, not cleaning
[2024-10-02 21:43:14] 2024-10-02 19:41:37,662 [wrapper] ==== wrapper stdout END ====
[2024-10-02 21:43:14] 2024-10-02 19:41:37,744 [wrapper] ==== wrapper stderr END ====
[2024-10-02 21:43:14] 2024-10-02 19:41:37,887 [wrapper] apfmon messages muted
[2024-10-02 21:43:14]  *** Error codes and diagnostics ***
[2024-10-02 21:43:14]     "exeErrorCode": 0,
[2024-10-02 21:43:14]     "exeErrorDiag": "",
[2024-10-02 21:43:14]     "pilotErrorCode": 0,
[2024-10-02 21:43:14]     "pilotErrorDiag": "",
[2024-10-02 21:43:14]  *** Listing of results directory ***
[2024-10-02 21:43:14] total 812976
[2024-10-02 21:43:14] -rwx------. 1 boinc boinc     33814 Oct  2 07:04 runpilot2-wrapper.sh
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc      5653 Oct  2 07:05 queuedata.json
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc    484599 Oct  2 07:05 pilot3.tar.gz
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc       100 Oct  2 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-02 21:43:14] -rwxr-xr-x. 1 boinc boinc      7986 Oct  2 14:32 run_atlas
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc       105 Oct  2 14:32 job.xml
[2024-10-02 21:43:14] -rw-r--r--. 2 boinc boinc     17537 Oct  2 14:32 start_atlas.sh
[2024-10-02 21:43:14] drwxrwx--x. 2 boinc boinc        68 Oct  2 14:32 shared
[2024-10-02 21:43:14] -rw-r--r--. 2 boinc boinc    498160 Oct  2 14:32 input.tar.gz
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc      6346 Oct  2 14:32 init_data.xml
[2024-10-02 21:43:14] -rw-r--r--. 2 boinc boinc 596951351 Oct  2 14:32 EVNT.41481121._000004.pool.root.1
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc         0 Oct  2 14:32 boinc_lockfile
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc      2536 Oct  2 14:32 pandaJob.out
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc       424 Oct  2 14:33 setup.sh.local
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc   1021547 Oct  2 14:36 agis_schedconf.cvmfs.json
[2024-10-02 21:43:14] drwx------. 4 boinc boinc      4096 Oct  2 14:36 pilot3
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc 225820978 Oct  2 21:38 HITS.41481123._000282.pool.root.1
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc       532 Oct  2 21:39 boinc_task_state.xml
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc      1018 Oct  2 21:39 memory_monitor_summary.json
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc   1615815 Oct  2 21:39 agis_ddmendpoints.agis.ALL.json
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc    514832 Oct  2 21:39 log.41481123._000282.job.log.tgz.1
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc        95 Oct  2 21:41 pilot_heartbeat.json
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc      7685 Oct  2 21:41 heartbeat.json
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc      4583 Oct  2 21:41 pilotlog.txt
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc   2413529 Oct  2 21:41 log.41481123._000282.job.log.1
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc       357 Oct  2 21:41 output.list
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc       620 Oct  2 21:41 runtime_log
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc   2949120 Oct  2 21:41 result.tar.gz
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc     10999 Oct  2 21:41 runtime_log.err
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc       646 Oct  2 21:41 Hi7NDmvi6F6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmTKnKDmXSZJRm.diag
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc      8192 Oct  2 21:43 boinc_mmap_file
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc        28 Oct  2 21:43 wrapper_checkpoint.txt
[2024-10-02 21:43:14] -rw-r--r--. 1 boinc boinc     21642 Oct  2 21:43 stderr.txt
[2024-10-02 21:43:14] HITS file was successfully produced:
[2024-10-02 21:43:14] -rw-------. 1 boinc boinc 225820978 Oct  2 21:38 shared/HITS.pool.root.1
[2024-10-02 21:43:14]  *** Contents of shared directory: ***
[2024-10-02 21:43:15] total 806884
[2024-10-02 21:43:15] -rw-r--r--. 2 boinc boinc     17537 Oct  2 14:32 start_atlas.sh
[2024-10-02 21:43:15] -rw-r--r--. 2 boinc boinc    498160 Oct  2 14:32 input.tar.gz
[2024-10-02 21:43:15] -rw-r--r--. 2 boinc boinc 596951351 Oct  2 14:32 ATLAS.root_0
[2024-10-02 21:43:15] -rw-------. 1 boinc boinc 225820978 Oct  2 21:38 HITS.pool.root.1
[2024-10-02 21:43:15] -rw-------. 1 boinc boinc   2949120 Oct  2 21:41 result.tar.gz
21:43:16 (12645): run_atlas exited; CPU time 91416.867259
21:43:16 (12645): called boinc_finish(0)

</stderr_txt>
]]>

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