Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:53:22 (32469): wrapper (7.7.26015): starting
17:53:22 (32469): wrapper: running run_atlas (--nthreads 8)
[2024-10-01 17:53:22] Arguments: --nthreads 8
[2024-10-01 17:53:22] Threads: 8
[2024-10-01 17:53:22] Checking for CVMFS
[2024-10-01 17:53:23] Probing /cvmfs/atlas.cern.ch... OK
[2024-10-01 17:53:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-10-01 17:53:23] Running cvmfs_config stat atlas.cern.ch
[2024-10-01 17:53:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-10-01 17:53:24] 2.11.2.0 28745 51621 69536 137856 3 60 24909400 25165825 3359 130560 0 35183161 99.945 17719313 7657 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-10-01 17:53:24] CVMFS is ok
[2024-10-01 17:53:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-10-01 17:53:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-10-01 17:53:24] Further information can be found at the LHC@home message board.
[2024-10-01 17:53:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-10-01 17:53:24] Checking for apptainer binary...
[2024-10-01 17:53:24] Using apptainer found in PATH at /usr/bin/apptainer
[2024-10-01 17:53:24] Running /usr/bin/apptainer --version
[2024-10-01 17:53:25] apptainer version 1.3.2-1.el7
[2024-10-01 17:53:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-10-01 17:55:07] cg-vwn339.simple-grid.lan
[2024-10-01 17:55:07] apptainer works
[2024-10-01 17:55:07] Set ATHENA_PROC_NUMBER=8
[2024-10-01 17:55:07] Set ATHENA_CORE_NUMBER=8
[2024-10-01 17:55:07] Starting ATLAS job with PandaID=6352495716
[2024-10-01 17:55:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-10-01 21:28:51]  *** The last 200 lines of the pilot log: ***
[2024-10-01 21:28:51] 2024-10-01 19:23:55,071 | INFO     | right removable region: 187
[2024-10-01 21:28:51] 2024-10-01 19:23:55,072 | INFO     | model: linear, x: [1727799089.0, 1727799150.0, 1727799211.0, 1727799272.0, 1727799333.0, 1727799394.0, 1727799455.0, 1727799516.0, 1727799577.0, 1727799638.0, 1727
[2024-10-01 21:28:51] 2024-10-01 19:23:55,072 | INFO     | sum of square deviations: 2060343747.0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,073 | INFO     | sum of deviations: 74386559251.0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,073 | INFO     | mean x: 1727804792.5
[2024-10-01 21:28:51] 2024-10-01 19:23:55,074 | INFO     | mean y: 2430556.8936170214
[2024-10-01 21:28:51] 2024-10-01 19:23:55,074 | INFO     | -- intersect: -62378157031.27209
[2024-10-01 21:28:51] 2024-10-01 19:23:55,074 | INFO     | intersect: -62378157031.27209
[2024-10-01 21:28:51] 2024-10-01 19:23:55,074 | INFO     | chi2: 5.207237818913567
[2024-10-01 21:28:51] 2024-10-01 19:23:55,074 | INFO     | current chi2=5.207237818913567 (change=47.29665726984514 %)
[2024-10-01 21:28:51] 2024-10-01 19:23:55,074 | INFO     | model: linear, x: [1727799394.0, 1727799455.0, 1727799516.0, 1727799577.0, 1727799638.0, 1727799699.0, 1727799760.0, 1727799821.0, 1727799882.0, 1727799943.0, 1727
[2024-10-01 21:28:51] 2024-10-01 19:23:55,075 | INFO     | sum of square deviations: 1900284932.0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,076 | INFO     | sum of deviations: 29778766805.000008
[2024-10-01 21:28:51] 2024-10-01 19:23:55,076 | INFO     | mean x: 1727804945.0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,076 | INFO     | mean y: 2473036.6393442624
[2024-10-01 21:28:51] 2024-10-01 19:23:55,076 | INFO     | -- intersect: -27073414202.822735
[2024-10-01 21:28:51] 2024-10-01 19:23:55,076 | INFO     | intersect: -27073414202.822735
[2024-10-01 21:28:51] 2024-10-01 19:23:55,077 | INFO     | chi2: 2.97255540566609
[2024-10-01 21:28:51] 2024-10-01 19:23:55,077 | INFO     | current chi2=2.97255540566609 (change=42.914929007673386 %)
[2024-10-01 21:28:51] 2024-10-01 19:23:55,077 | INFO     | model: linear, x: [1727799699.0, 1727799760.0, 1727799821.0, 1727799882.0, 1727799943.0, 1727800004.0, 1727800065.0, 1727800126.0, 1727800187.0, 1727800248.0, 1727
[2024-10-01 21:28:51] 2024-10-01 19:23:55,077 | INFO     | sum of square deviations: 1748737904.5
[2024-10-01 21:28:51] 2024-10-01 19:23:55,078 | INFO     | sum of deviations: -9806384705.0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,079 | INFO     | mean x: 1727805097.5
[2024-10-01 21:28:51] 2024-10-01 19:23:55,079 | INFO     | mean y: 2512874.584269663
[2024-10-01 21:28:51] 2024-10-01 19:23:55,079 | INFO     | -- intersect: 9691512831.492928
[2024-10-01 21:28:51] 2024-10-01 19:23:55,079 | INFO     | intersect: 9691512831.492928
[2024-10-01 21:28:51] 2024-10-01 19:23:55,079 | INFO     | chi2: 1.2360143086114792
[2024-10-01 21:28:51] 2024-10-01 19:23:55,079 | INFO     | current chi2=1.2360143086114792 (change=58.41913303767291 %)
[2024-10-01 21:28:51] 2024-10-01 19:23:55,080 | INFO     | model: linear, x: [1727800004.0, 1727800065.0, 1727800126.0, 1727800187.0, 1727800248.0, 1727800309.0, 1727800370.0, 1727800431.0, 1727800492.0, 1727800553.0, 1727
[2024-10-01 21:28:51] 2024-10-01 19:23:55,080 | INFO     | sum of square deviations: 1605470102.0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,081 | INFO     | sum of deviations: -25425437084.0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,081 | INFO     | mean x: 1727805250.0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,081 | INFO     | mean y: 2529323.8901734105
[2024-10-01 21:28:51] 2024-10-01 19:23:55,081 | INFO     | -- intersect: 27365358206.567112
[2024-10-01 21:28:51] 2024-10-01 19:23:55,081 | INFO     | intersect: 27365358206.567112
[2024-10-01 21:28:51] 2024-10-01 19:23:55,081 | INFO     | chi2: 0.8240408282452351
[2024-10-01 21:28:51] 2024-10-01 19:23:55,082 | INFO     | current chi2=0.8240408282452351 (change=33.33080187631883 %)
[2024-10-01 21:28:51] 2024-10-01 19:23:55,082 | INFO     | model: linear, x: [1727800309.0, 1727800370.0, 1727800431.0, 1727800492.0, 1727800553.0, 1727800614.0, 1727800675.0, 1727800736.0, 1727800797.0, 1727800858.0, 1727
[2024-10-01 21:28:51] 2024-10-01 19:23:55,082 | INFO     | sum of square deviations: 1470248962.0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,083 | INFO     | sum of deviations: -24814476425.5
[2024-10-01 21:28:51] 2024-10-01 19:23:55,083 | INFO     | mean x: 1727805402.5
[2024-10-01 21:28:51] 2024-10-01 19:23:55,083 | INFO     | mean y: 2528627.625
[2024-10-01 21:28:51] 2024-10-01 19:23:55,083 | INFO     | -- intersect: 29163975114.800133
[2024-10-01 21:28:51] 2024-10-01 19:23:55,084 | INFO     | intersect: 29163975114.800133
[2024-10-01 21:28:51] 2024-10-01 19:23:55,084 | INFO     | chi2: 0.8233206006998548
[2024-10-01 21:28:51] 2024-10-01 19:23:55,084 | INFO     | current chi2=0.8233206006998548 (change=0.08740192484320917 %)
[2024-10-01 21:28:51] 2024-10-01 19:23:55,084 | INFO     | left removable region: 50
[2024-10-01 21:28:51] 2024-10-01 19:23:55,084 | INFO     | model: linear, x: [1727801834.0, 1727801895.0, 1727801956.0, 1727802017.0, 1727802078.0, 1727802139.0, 1727802200.0, 1727802261.0, 1727802322.0, 1727802383.0, 1727
[2024-10-01 21:28:51] 2024-10-01 19:23:55,085 | INFO     | sum of square deviations: 797291228.0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,086 | INFO     | sum of deviations: -4884953687.999997
[2024-10-01 21:28:51] 2024-10-01 19:23:55,086 | INFO     | mean x: 1727805982.0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,086 | INFO     | mean y: 2530629.5182481753
[2024-10-01 21:28:51] 2024-10-01 19:23:55,086 | INFO     | -- intersect: 10588690250.378088
[2024-10-01 21:28:51] 2024-10-01 19:23:55,086 | INFO     | intersect: 10588690250.378088
[2024-10-01 21:28:51] 2024-10-01 19:23:55,086 | INFO     | chi2: 0.018088243383827758
[2024-10-01 21:28:51] 2024-10-01 19:23:55,087 | INFO     | -- intersect: 10588690250.378088
[2024-10-01 21:28:51] 2024-10-01 19:23:55,087 | INFO     | current memory leak: -6.13 B/s (using 137 data points, chi2=0.02)
[2024-10-01 21:28:51] 2024-10-01 19:23:55,088 | INFO     | ..............................
[2024-10-01 21:28:51] 2024-10-01 19:23:55,088 | INFO     | . Timing measurements:
[2024-10-01 21:28:51] 2024-10-01 19:23:55,088 | INFO     | . get job = 0 s
[2024-10-01 21:28:51] 2024-10-01 19:23:55,088 | INFO     | . initial setup = 9 s
[2024-10-01 21:28:51] 2024-10-01 19:23:55,088 | INFO     | . payload setup = 124 s
[2024-10-01 21:28:51] 2024-10-01 19:23:55,089 | INFO     | . stage-in = 0 s
[2024-10-01 21:28:51] 2024-10-01 19:23:55,089 | INFO     | . payload execution = 11921 s
[2024-10-01 21:28:51] 2024-10-01 19:23:55,089 | INFO     | . stage-out = 3 s
[2024-10-01 21:28:51] 2024-10-01 19:23:55,089 | INFO     | . log creation = 1 s
[2024-10-01 21:28:51] 2024-10-01 19:23:55,089 | INFO     | ..............................
[2024-10-01 21:28:51] 2024-10-01 19:23:55,255 | INFO     | 
[2024-10-01 21:28:51] 2024-10-01 19:23:55,255 | INFO     | job summary report
[2024-10-01 21:28:51] 2024-10-01 19:23:55,255 | INFO     | --------------------------------------------------
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | PanDA job id: 6352495716
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | task id: 41081555
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | errors: (none)
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | status: LOG_TRANSFER = DONE 
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | pilot state: finished 
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | transexitcode: 0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | exeerrorcode: 0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | exeerrordiag: 
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | exitcode: 0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | exitmsg: OK
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | cpuconsumptiontime: 41176 s
[2024-10-01 21:28:51] 2024-10-01 19:23:55,256 | INFO     | nevents: 400
[2024-10-01 21:28:51] 2024-10-01 19:23:55,257 | INFO     | neventsw: 0
[2024-10-01 21:28:51] 2024-10-01 19:23:55,257 | INFO     | pid: 20452
[2024-10-01 21:28:51] 2024-10-01 19:23:55,257 | INFO     | pgrp: 20452
[2024-10-01 21:28:51] 2024-10-01 19:23:55,257 | INFO     | corecount: 8
[2024-10-01 21:28:51] 2024-10-01 19:23:55,257 | INFO     | event service: False
[2024-10-01 21:28:51] 2024-10-01 19:23:55,257 | INFO     | sizes: {0: 2435307, 1: 2435506, 12: 2435506, 23: 2435534, 33: 2435562, 44: 2435590, 55: 2435746, 66: 2435774, 76: 2435802, 87: 2435858, 93: 2436092, 98: 2436400, 1
[2024-10-01 21:28:51] 2024-10-01 19:23:55,257 | INFO     | --------------------------------------------------
[2024-10-01 21:28:51] 2024-10-01 19:23:55,257 | INFO     | 
[2024-10-01 21:28:51] 2024-10-01 19:23:55,257 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-10-01 21:28:51] 2024-10-01 19:23:55,919 | INFO     | queue jobs had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,920 | INFO     | queue payloads had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,920 | INFO     | queue data_in had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,920 | INFO     | queue data_out had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,920 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,920 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,920 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,920 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,921 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,921 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,921 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,921 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,921 | INFO     | queue completed_jobids has 1 job(s)
[2024-10-01 21:28:51] 2024-10-01 19:23:55,921 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,921 | INFO     | queue messages had 0 job(s) [purged]
[2024-10-01 21:28:51] 2024-10-01 19:23:55,922 | INFO     | job 6352495716 has completed (purged errors)
[2024-10-01 21:28:51] 2024-10-01 19:23:55,922 | INFO     | overall cleanup function is called
[2024-10-01 21:28:51] 2024-10-01 19:23:56,932 | INFO     | --- collectZombieJob: --- 10, [20452]
[2024-10-01 21:28:51] 2024-10-01 19:23:56,932 | INFO     | zombie collector waiting for pid 20452
[2024-10-01 21:28:51] 2024-10-01 19:23:56,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-10-01 21:28:51] 2024-10-01 19:23:56,933 | INFO     | collected zombie processes
[2024-10-01 21:28:51] 2024-10-01 19:23:56,933 | INFO     | will  attempt to kill all subprocesses of pid=20452
[2024-10-01 21:28:51] 2024-10-01 19:23:57,834 | INFO     | process IDs to be killed: [20452] (in reverse order)
[2024-10-01 21:28:51] 2024-10-01 19:23:58,681 | WARNING  | found no corresponding commands to process id(s)
[2024-10-01 21:28:51] 2024-10-01 19:23:58,682 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-10-01 21:28:51] 2024-10-01 19:23:58,686 | INFO     | did not find any defunct processes belonging to 20452
[2024-10-01 21:28:51] 2024-10-01 19:23:58,690 | INFO     | did not find any defunct processes belonging to 20452
[2024-10-01 21:28:51] 2024-10-01 19:23:58,690 | INFO     | ready for new job
[2024-10-01 21:28:51] 2024-10-01 19:23:58,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-10-01 21:28:51] 2024-10-01 19:23:58,693 | INFO     | *************************************
[2024-10-01 21:28:51] 2024-10-01 19:23:58,694 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-10-01 21:28:51] 2024-10-01 19:23:58,694 | INFO     | *************************************
[2024-10-01 21:28:51] 2024-10-01 19:23:58,694 | INFO     | 
[2024-10-01 21:28:51] 2024-10-01 19:23:58,695 | INFO     | pilot is running in a VM
[2024-10-01 21:28:51] 2024-10-01 19:23:58,695 | INFO     | architecture information:
[2024-10-01 21:28:51] 2024-10-01 19:23:58,699 | INFO     | executing command: cat /etc/os-release
[2024-10-01 21:28:51] 2024-10-01 19:23:58,905 | INFO     | cat /etc/os-release:
[2024-10-01 21:28:51] NAME="CentOS Linux"
[2024-10-01 21:28:51] VERSION="7 (Core)"
[2024-10-01 21:28:51] ID="centos"
[2024-10-01 21:28:51] ID_LIKE="rhel fedora"
[2024-10-01 21:28:51] VERSION_ID="7"
[2024-10-01 21:28:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-10-01 21:28:51] ANSI_COLOR="0;31"
[2024-10-01 21:28:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-10-01 21:28:51] HOME_URL="https://www.centos.org/"
[2024-10-01 21:28:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-10-01 21:28:51] 
[2024-10-01 21:28:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-10-01 21:28:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-10-01 21:28:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-10-01 21:28:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-10-01 21:28:51] 
[2024-10-01 21:28:51] 2024-10-01 19:23:58,906 | INFO     | *************************************
[2024-10-01 21:28:51] 2024-10-01 19:23:59,409 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-10-01 21:28:51] 2024-10-01 19:23:59,655 | INFO     | sufficient remaining disk space (489249832960 B)
[2024-10-01 21:28:51] 2024-10-01 19:23:59,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-10-01 21:28:51] 2024-10-01 19:23:59,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-10-01 21:28:51] 2024-10-01 19:23:59,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-10-01 21:28:51] 2024-10-01 19:23:59,719 | INFO     | all payload control threads have been joined
[2024-10-01 21:28:51] 2024-10-01 19:23:59,754 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-10-01 21:28:51] 2024-10-01 19:23:59,754 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-10-01 21:28:51] 2024-10-01 19:23:59,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-10-01 21:28:51] 2024-10-01 19:23:59,755 | INFO     | will abort loop
[2024-10-01 21:28:51] 2024-10-01 19:23:59,792 | INFO     | all job control threads have been joined
[2024-10-01 21:28:51] 2024-10-01 19:23:59,912 | INFO     | found 0 job(s) in 20 queues
[2024-10-01 21:28:51] 2024-10-01 19:23:59,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-10-01 21:28:51] 2024-10-01 19:23:59,913 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-10-01 21:28:51] 2024-10-01 19:24:00,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-10-01 21:28:51] 2024-10-01 19:24:00,480 | INFO     | all data control threads have been joined
[2024-10-01 21:28:51] 2024-10-01 19:24:00,661 | INFO     | [job] retrieve thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:00,725 | INFO     | [payload] control thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:00,761 | INFO     | [job] job monitor thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:00,765 | INFO     | [job] validate thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:00,798 | INFO     | [job] control thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:00,965 | INFO     | [payload] run_realtimelog thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:00,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-10-01 21:28:51] 2024-10-01 19:24:01,108 | INFO     | [payload] validate_post thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:01,114 | INFO     | [payload] failed_post thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:01,153 | INFO     | [payload] validate_pre thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:01,279 | INFO     | [job] queue monitor thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:01,486 | INFO     | [data] control thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:01,506 | INFO     | [data] copytool_in thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:01,884 | INFO     | [job] create_data_payload thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:02,058 | INFO     | [payload] execute_payloads thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:02,992 | INFO     | [data] copytool_out thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:03,672 | INFO     | [data] queue_monitor thread has finished
[2024-10-01 21:28:51] 2024-10-01 19:24:05,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729289172800)>', '<ExcThread(monitor, started 139728624015104)>']
[2024-10-01 21:28:51] 2024-10-01 19:24:05,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-10-01 21:28:51] 2024-10-01 19:24:05,949 | INFO     | [monitor] control thread has ended
[2024-10-01 21:28:51] 2024-10-01 19:24:10,780 | INFO     | all workflow threads have been joined
[2024-10-01 21:28:51] 2024-10-01 19:24:10,780 | INFO     | end of generic workflow (traces error code: 0)
[2024-10-01 21:28:51] 2024-10-01 19:24:10,781 | INFO     | traces error code: 0
[2024-10-01 21:28:51] 2024-10-01 19:24:10,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-10-01 21:28:51] 2024-10-01 19:24:11,273 [wrapper] ==== pilot stdout END ====
[2024-10-01 21:28:51] 2024-10-01 19:24:11,327 [wrapper] ==== wrapper stdout RESUME ====
[2024-10-01 21:28:51] 2024-10-01 19:24:11,375 [wrapper] pilotpid: 10738
[2024-10-01 21:28:51] 2024-10-01 19:24:11,423 [wrapper] Pilot exit status: 0
[2024-10-01 21:28:51] 2024-10-01 19:24:11,889 [wrapper] pandaids: 6352495716
[2024-10-01 21:28:51] 2024-10-01 19:24:12,176 [wrapper] cleanup supervisor_pilot 17640 10739
[2024-10-01 21:28:51] 2024-10-01 19:24:12,239 [wrapper] Test setup, not cleaning
[2024-10-01 21:28:51] 2024-10-01 19:24:12,281 [wrapper] ==== wrapper stdout END ====
[2024-10-01 21:28:51] 2024-10-01 19:24:12,326 [wrapper] ==== wrapper stderr END ====
[2024-10-01 21:28:51] 2024-10-01 19:24:12,410 [wrapper] apfmon messages muted
[2024-10-01 21:28:51]  *** Error codes and diagnostics ***
[2024-10-01 21:28:51]     "exeErrorCode": 0,
[2024-10-01 21:28:51]     "exeErrorDiag": "",
[2024-10-01 21:28:51]     "pilotErrorCode": 0,
[2024-10-01 21:28:51]     "pilotErrorDiag": "",
[2024-10-01 21:28:51]  *** Listing of results directory ***
[2024-10-01 21:28:51] total 589776
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc    484599 Oct  1 02:50 pilot3.tar.gz
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc      5653 Oct  1 03:28 queuedata.json
[2024-10-01 21:28:51] -rwx------. 1 boinc boinc     33814 Oct  1 03:28 runpilot2-wrapper.sh
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc       100 Oct  1 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-10-01 21:28:51] -rwxr-xr-x. 1 boinc boinc      7986 Oct  1 17:53 run_atlas
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc       105 Oct  1 17:53 job.xml
[2024-10-01 21:28:51] -rw-r--r--. 2 boinc boinc 442117306 Oct  1 17:53 EVNT.41081552._000004.pool.root.1
[2024-10-01 21:28:51] -rw-r--r--. 2 boinc boinc    498172 Oct  1 17:53 input.tar.gz
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc      6345 Oct  1 17:53 init_data.xml
[2024-10-01 21:28:51] -rw-r--r--. 2 boinc boinc     17537 Oct  1 17:53 start_atlas.sh
[2024-10-01 21:28:51] drwxrwx--x. 2 boinc boinc        68 Oct  1 17:53 shared
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc         0 Oct  1 17:53 boinc_lockfile
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc      2565 Oct  1 17:55 pandaJob.out
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc       424 Oct  1 17:55 setup.sh.local
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc   1021387 Oct  1 17:58 agis_schedconf.cvmfs.json
[2024-10-01 21:28:51] drwx------. 4 boinc boinc      4096 Oct  1 17:58 pilot3
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc 155177698 Oct  1 21:21 HITS.41081555._000098.pool.root.1
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc       532 Oct  1 21:21 boinc_task_state.xml
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc      1012 Oct  1 21:22 memory_monitor_summary.json
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc   1615815 Oct  1 21:22 agis_ddmendpoints.agis.ALL.json
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc    376452 Oct  1 21:22 log.41081555._000098.job.log.tgz.1
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc        95 Oct  1 21:23 pilot_heartbeat.json
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc      7689 Oct  1 21:23 heartbeat.json
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc      4460 Oct  1 21:24 pilotlog.txt
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc   1017811 Oct  1 21:24 log.41081555._000098.job.log.1
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc       357 Oct  1 21:24 output.list
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc       620 Oct  1 21:24 runtime_log
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc   1413120 Oct  1 21:24 result.tar.gz
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc     10999 Oct  1 21:24 runtime_log.err
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc       644 Oct  1 21:24 NEjLDmqrgF6n7OlckoGmwREmGgkVDo1bjSoqOlfODmZxrKDmK4jOJm.diag
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc      8192 Oct  1 21:28 boinc_mmap_file
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc        28 Oct  1 21:28 wrapper_checkpoint.txt
[2024-10-01 21:28:51] -rw-r--r--. 1 boinc boinc     21561 Oct  1 21:28 stderr.txt
[2024-10-01 21:28:51] HITS file was successfully produced:
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc 155177698 Oct  1 21:21 shared/HITS.pool.root.1
[2024-10-01 21:28:51]  *** Contents of shared directory: ***
[2024-10-01 21:28:51] total 585188
[2024-10-01 21:28:51] -rw-r--r--. 2 boinc boinc 442117306 Oct  1 17:53 ATLAS.root_0
[2024-10-01 21:28:51] -rw-r--r--. 2 boinc boinc    498172 Oct  1 17:53 input.tar.gz
[2024-10-01 21:28:51] -rw-r--r--. 2 boinc boinc     17537 Oct  1 17:53 start_atlas.sh
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc 155177698 Oct  1 21:21 HITS.pool.root.1
[2024-10-01 21:28:51] -rw-------. 1 boinc boinc   1413120 Oct  1 21:24 result.tar.gz
21:28:53 (32469): run_atlas exited; CPU time 41113.760065
21:28:53 (32469): called boinc_finish(0)

</stderr_txt>
]]>

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