Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:47:01 (2032): wrapper (7.7.26015): starting
22:47:01 (2032): wrapper: running run_atlas (--nthreads 8)
[2024-09-28 22:47:01] Arguments: --nthreads 8
[2024-09-28 22:47:01] Threads: 8
[2024-09-28 22:47:01] Checking for CVMFS
[2024-09-28 22:47:03] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-28 22:47:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-28 22:47:04] Running cvmfs_config stat atlas.cern.ch
[2024-09-28 22:47:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-28 22:47:05] 2.11.2.0 10283 78023 74912 137756 0 59 13848106 25165825 3719 130560 0 56452702 99.934 28064086 9134 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-09-28 22:47:05] CVMFS is ok
[2024-09-28 22:47:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-28 22:47:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-28 22:47:05] Further information can be found at the LHC@home message board.
[2024-09-28 22:47:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-28 22:47:05] Checking for apptainer binary...
[2024-09-28 22:47:05] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-28 22:47:05] Running /usr/bin/apptainer --version
[2024-09-28 22:47:05] apptainer version 1.3.2-1.el7
[2024-09-28 22:47:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-28 22:47:35] cg-vwn500.simple-grid.lan
[2024-09-28 22:47:35] apptainer works
[2024-09-28 22:47:35] Set ATHENA_PROC_NUMBER=8
[2024-09-28 22:47:35] Set ATHENA_CORE_NUMBER=8
[2024-09-28 22:47:35] Starting ATLAS job with PandaID=6349947212
[2024-09-28 22:47:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-29 02:18:10]  *** The last 200 lines of the pilot log: ***
[2024-09-29 02:18:10] 2024-09-29 00:17:55,326 | INFO     | intersect: -57782871088.95902
[2024-09-29 02:18:10] 2024-09-29 00:17:55,326 | INFO     | chi2: 5.046812931859302
[2024-09-29 02:18:10] 2024-09-29 00:17:55,326 | INFO     | model: linear, x: [1727556815.0, 1727556876.0, 1727556937.0, 1727556998.0, 1727557059.0, 1727557120.0, 1727557181.0, 1727557242.0, 1727557303.0, 1727557364.0, 1727
[2024-09-29 02:18:10] 2024-09-29 00:17:55,327 | INFO     | sum of square deviations: 2334722845.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,328 | INFO     | sum of deviations: 95262093534.50002
[2024-09-29 02:18:10] 2024-09-29 00:17:55,328 | INFO     | mean x: 1727562762.5
[2024-09-29 02:18:10] 2024-09-29 00:17:55,328 | INFO     | mean y: 2429517.2397959186
[2024-09-29 02:18:10] 2024-09-29 00:17:55,328 | INFO     | -- intersect: -70486127966.33348
[2024-09-29 02:18:10] 2024-09-29 00:17:55,328 | INFO     | intersect: -70486127966.33348
[2024-09-29 02:18:10] 2024-09-29 00:17:55,328 | INFO     | chi2: 4.2873095276483735
[2024-09-29 02:18:10] 2024-09-29 00:17:55,328 | INFO     | current chi2=4.2873095276483735 (change=15.049168940191308 %)
[2024-09-29 02:18:10] 2024-09-29 00:17:55,329 | INFO     | right removable region: 195
[2024-09-29 02:18:10] 2024-09-29 00:17:55,329 | INFO     | model: linear, x: [1727557120.0, 1727557181.0, 1727557242.0, 1727557303.0, 1727557364.0, 1727557425.0, 1727557486.0, 1727557547.0, 1727557608.0, 1727557669.0, 1727
[2024-09-29 02:18:10] 2024-09-29 00:17:55,329 | INFO     | sum of square deviations: 2334722845.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,330 | INFO     | sum of deviations: 33566794794.500008
[2024-09-29 02:18:10] 2024-09-29 00:17:55,330 | INFO     | mean x: 1727563067.5
[2024-09-29 02:18:10] 2024-09-29 00:17:55,330 | INFO     | mean y: 2462564.301020408
[2024-09-29 02:18:10] 2024-09-29 00:17:55,331 | INFO     | -- intersect: -24835070124.222214
[2024-09-29 02:18:10] 2024-09-29 00:17:55,331 | INFO     | intersect: -24835070124.222214
[2024-09-29 02:18:10] 2024-09-29 00:17:55,331 | INFO     | chi2: 2.38279268366299
[2024-09-29 02:18:10] 2024-09-29 00:17:55,331 | INFO     | current chi2=2.38279268366299 (change=52.786189703585016 %)
[2024-09-29 02:18:10] 2024-09-29 00:17:55,331 | INFO     | model: linear, x: [1727557425.0, 1727557486.0, 1727557547.0, 1727557608.0, 1727557669.0, 1727557730.0, 1727557791.0, 1727557852.0, 1727557913.0, 1727557974.0, 1727
[2024-09-29 02:18:10] 2024-09-29 00:17:55,331 | INFO     | sum of square deviations: 2160561440.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,333 | INFO     | sum of deviations: -2238813277.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,333 | INFO     | mean x: 1727563220.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,333 | INFO     | mean y: 2493920.0418848167
[2024-09-29 02:18:10] 2024-09-29 00:17:55,333 | INFO     | -- intersect: 1792626522.7013452
[2024-09-29 02:18:10] 2024-09-29 00:17:55,333 | INFO     | intersect: 1792626522.7013452
[2024-09-29 02:18:10] 2024-09-29 00:17:55,333 | INFO     | chi2: 1.1746882943976404
[2024-09-29 02:18:10] 2024-09-29 00:17:55,333 | INFO     | current chi2=1.1746882943976404 (change=50.701196018789595 %)
[2024-09-29 02:18:10] 2024-09-29 00:17:55,334 | INFO     | model: linear, x: [1727557730.0, 1727557791.0, 1727557852.0, 1727557913.0, 1727557974.0, 1727558035.0, 1727558096.0, 1727558157.0, 1727558218.0, 1727558279.0, 1727
[2024-09-29 02:18:10] 2024-09-29 00:17:55,334 | INFO     | sum of square deviations: 1995283922.5
[2024-09-29 02:18:10] 2024-09-29 00:17:55,335 | INFO     | sum of deviations: -15424767745.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,335 | INFO     | mean x: 1727563372.5
[2024-09-29 02:18:10] 2024-09-29 00:17:55,335 | INFO     | mean y: 2505929.8924731184
[2024-09-29 02:18:10] 2024-09-29 00:17:55,336 | INFO     | -- intersect: 13357629722.096247
[2024-09-29 02:18:10] 2024-09-29 00:17:55,336 | INFO     | intersect: 13357629722.096247
[2024-09-29 02:18:10] 2024-09-29 00:17:55,336 | INFO     | chi2: 0.8627222527862088
[2024-09-29 02:18:10] 2024-09-29 00:17:55,336 | INFO     | current chi2=0.8627222527862088 (change=26.557346582856884 %)
[2024-09-29 02:18:10] 2024-09-29 00:17:55,336 | INFO     | model: linear, x: [1727558035.0, 1727558096.0, 1727558157.0, 1727558218.0, 1727558279.0, 1727558340.0, 1727558401.0, 1727558462.0, 1727558523.0, 1727558584.0, 1727
[2024-09-29 02:18:10] 2024-09-29 00:17:55,336 | INFO     | sum of square deviations: 1838657730.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,337 | INFO     | sum of deviations: -8952133263.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,338 | INFO     | mean x: 1727563525.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,338 | INFO     | mean y: 2499619.4364640885
[2024-09-29 02:18:10] 2024-09-29 00:17:55,338 | INFO     | -- intersect: 8413732794.464659
[2024-09-29 02:18:10] 2024-09-29 00:17:55,338 | INFO     | intersect: 8413732794.464659
[2024-09-29 02:18:10] 2024-09-29 00:17:55,338 | INFO     | chi2: 0.8266407709162055
[2024-09-29 02:18:10] 2024-09-29 00:17:55,338 | INFO     | current chi2=0.8266407709162055 (change=4.182282507895936 %)
[2024-09-29 02:18:10] 2024-09-29 00:17:55,338 | INFO     | left removable region: 40
[2024-09-29 02:18:10] 2024-09-29 00:17:55,338 | INFO     | model: linear, x: [1727559255.0, 1727559316.0, 1727559377.0, 1727559438.0, 1727559499.0, 1727559560.0, 1727559621.0, 1727559682.0, 1727559743.0, 1727559804.0, 1727
[2024-09-29 02:18:10] 2024-09-29 00:17:55,338 | INFO     | sum of square deviations: 1154663510.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,339 | INFO     | sum of deviations: 2937219357.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,339 | INFO     | mean x: 1727563952.0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,339 | INFO     | mean y: 2512427.5096774194
[2024-09-29 02:18:10] 2024-09-29 00:17:55,339 | INFO     | -- intersect: -4392044286.480374
[2024-09-29 02:18:10] 2024-09-29 00:17:55,340 | INFO     | intersect: -4392044286.480374
[2024-09-29 02:18:10] 2024-09-29 00:17:55,340 | INFO     | chi2: 0.0012060966129608106
[2024-09-29 02:18:10] 2024-09-29 00:17:55,340 | INFO     | -- intersect: -4392044286.480374
[2024-09-29 02:18:10] 2024-09-29 00:17:55,340 | INFO     | current memory leak: 2.54 B/s (using 155 data points, chi2=0.00)
[2024-09-29 02:18:10] 2024-09-29 00:17:55,341 | INFO     | ..............................
[2024-09-29 02:18:10] 2024-09-29 00:17:55,342 | INFO     | . Timing measurements:
[2024-09-29 02:18:10] 2024-09-29 00:17:55,342 | INFO     | . get job = 0 s
[2024-09-29 02:18:10] 2024-09-29 00:17:55,342 | INFO     | . initial setup = 3 s
[2024-09-29 02:18:10] 2024-09-29 00:17:55,342 | INFO     | . payload setup = 75 s
[2024-09-29 02:18:10] 2024-09-29 00:17:55,342 | INFO     | . stage-in = 0 s
[2024-09-29 02:18:10] 2024-09-29 00:17:55,342 | INFO     | . payload execution = 12272 s
[2024-09-29 02:18:10] 2024-09-29 00:17:55,342 | INFO     | . stage-out = 2 s
[2024-09-29 02:18:10] 2024-09-29 00:17:55,342 | INFO     | . log creation = 0 s
[2024-09-29 02:18:10] 2024-09-29 00:17:55,342 | INFO     | ..............................
[2024-09-29 02:18:10] 2024-09-29 00:17:55,710 | INFO     | 
[2024-09-29 02:18:10] 2024-09-29 00:17:55,710 | INFO     | job summary report
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | --------------------------------------------------
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | PanDA job id: 6349947212
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | task id: 41081631
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | errors: (none)
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | pilot state: finished 
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | transexitcode: 0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | exeerrorcode: 0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | exeerrordiag: 
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | exitcode: 0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | exitmsg: OK
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | cpuconsumptiontime: 41985 s
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | nevents: 400
[2024-09-29 02:18:10] 2024-09-29 00:17:55,711 | INFO     | neventsw: 0
[2024-09-29 02:18:10] 2024-09-29 00:17:55,712 | INFO     | pid: 16729
[2024-09-29 02:18:10] 2024-09-29 00:17:55,712 | INFO     | pgrp: 16729
[2024-09-29 02:18:10] 2024-09-29 00:17:55,712 | INFO     | corecount: 8
[2024-09-29 02:18:10] 2024-09-29 00:17:55,712 | INFO     | event service: False
[2024-09-29 02:18:10] 2024-09-29 00:17:55,712 | INFO     | sizes: {0: 2435308, 1: 2435507, 12: 2435507, 23: 2435535, 33: 2435563, 44: 2435591, 55: 2435747, 57: 2435981, 66: 2436009, 12352: 2465735, 12355: 2475095, 12393: 2
[2024-09-29 02:18:10] 2024-09-29 00:17:55,712 | INFO     | --------------------------------------------------
[2024-09-29 02:18:10] 2024-09-29 00:17:55,712 | INFO     | 
[2024-09-29 02:18:10] 2024-09-29 00:17:55,712 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2024-09-29 02:18:10] 2024-09-29 00:17:55,807 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,808 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,808 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,808 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,810 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,810 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,812 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-29 02:18:10] 2024-09-29 00:17:55,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,812 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-29 02:18:10] 2024-09-29 00:17:55,813 | INFO     | job 6349947212 has completed (purged errors)
[2024-09-29 02:18:10] 2024-09-29 00:17:55,813 | INFO     | overall cleanup function is called
[2024-09-29 02:18:10] 2024-09-29 00:17:56,826 | INFO     | --- collectZombieJob: --- 10, [16729]
[2024-09-29 02:18:10] 2024-09-29 00:17:56,827 | INFO     | zombie collector waiting for pid 16729
[2024-09-29 02:18:10] 2024-09-29 00:17:56,827 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-29 02:18:10] 2024-09-29 00:17:56,828 | INFO     | collected zombie processes
[2024-09-29 02:18:10] 2024-09-29 00:17:56,828 | INFO     | will  attempt to kill all subprocesses of pid=16729
[2024-09-29 02:18:10] 2024-09-29 00:17:56,952 | INFO     | process IDs to be killed: [16729] (in reverse order)
[2024-09-29 02:18:10] 2024-09-29 00:17:57,112 | WARNING  | found no corresponding commands to process id(s)
[2024-09-29 02:18:10] 2024-09-29 00:17:57,113 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-29 02:18:10] 2024-09-29 00:17:57,120 | INFO     | did not find any defunct processes belonging to 16729
[2024-09-29 02:18:10] 2024-09-29 00:17:57,128 | INFO     | did not find any defunct processes belonging to 16729
[2024-09-29 02:18:10] 2024-09-29 00:17:57,129 | INFO     | ready for new job
[2024-09-29 02:18:10] 2024-09-29 00:17:57,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-29 02:18:10] 2024-09-29 00:17:57,134 | INFO     | *************************************
[2024-09-29 02:18:10] 2024-09-29 00:17:57,135 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-09-29 02:18:10] 2024-09-29 00:17:57,135 | INFO     | *************************************
[2024-09-29 02:18:10] 2024-09-29 00:17:57,135 | INFO     | 
[2024-09-29 02:18:10] 2024-09-29 00:17:57,136 | INFO     | pilot is running in a VM
[2024-09-29 02:18:10] 2024-09-29 00:17:57,136 | INFO     | architecture information:
[2024-09-29 02:18:10] 2024-09-29 00:17:57,137 | INFO     | executing command: cat /etc/os-release
[2024-09-29 02:18:10] 2024-09-29 00:17:57,191 | INFO     | cat /etc/os-release:
[2024-09-29 02:18:10] NAME="CentOS Linux"
[2024-09-29 02:18:10] VERSION="7 (Core)"
[2024-09-29 02:18:10] ID="centos"
[2024-09-29 02:18:10] ID_LIKE="rhel fedora"
[2024-09-29 02:18:10] VERSION_ID="7"
[2024-09-29 02:18:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-29 02:18:10] ANSI_COLOR="0;31"
[2024-09-29 02:18:10] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-29 02:18:10] HOME_URL="https://www.centos.org/"
[2024-09-29 02:18:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-29 02:18:10] 
[2024-09-29 02:18:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-29 02:18:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-29 02:18:10] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-29 02:18:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-29 02:18:10] 
[2024-09-29 02:18:10] 2024-09-29 00:17:57,192 | INFO     | *************************************
[2024-09-29 02:18:10] 2024-09-29 00:17:57,694 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2024-09-29 02:18:10] 2024-09-29 00:17:57,764 | INFO     | sufficient remaining disk space (489007611904 B)
[2024-09-29 02:18:10] 2024-09-29 00:17:57,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-29 02:18:10] 2024-09-29 00:17:57,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-29 02:18:10] 2024-09-29 00:17:57,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-29 02:18:10] 2024-09-29 00:17:57,879 | INFO     | aborting loop
[2024-09-29 02:18:10] 2024-09-29 00:17:57,955 | INFO     | all data control threads have been joined
[2024-09-29 02:18:10] 2024-09-29 00:17:57,991 | INFO     | all job control threads have been joined
[2024-09-29 02:18:10] 2024-09-29 00:17:58,213 | INFO     | found 0 job(s) in 20 queues
[2024-09-29 02:18:10] 2024-09-29 00:17:58,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-29 02:18:10] 2024-09-29 00:17:58,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-29 02:18:10] 2024-09-29 00:17:58,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-29 02:18:10] 2024-09-29 00:17:58,771 | INFO     | [job] retrieve thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:17:58,885 | INFO     | [job] job monitor thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:17:58,961 | INFO     | [data] control thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:17:58,998 | INFO     | [job] control thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:17:59,046 | INFO     | all payload control threads have been joined
[2024-09-29 02:18:10] 2024-09-29 00:17:59,157 | INFO     | [payload] validate_post thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:17:59,367 | INFO     | [job] create_data_payload thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:17:59,723 | INFO     | [data] copytool_in thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:17:59,735 | INFO     | [payload] failed_post thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:17:59,772 | INFO     | [job] validate thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:17:59,936 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:18:00,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-29 02:18:10] 2024-09-29 00:18:00,052 | INFO     | [payload] control thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:18:00,098 | INFO     | [payload] validate_pre thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:18:00,242 | INFO     | [payload] execute_payloads thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:18:00,324 | INFO     | [data] copytool_out thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:18:00,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-29 02:18:10] 2024-09-29 00:18:01,544 | INFO     | [job] queue monitor thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:18:04,025 | INFO     | [data] queue_monitor thread has finished
[2024-09-29 02:18:10] 2024-09-29 00:18:04,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417764321088)>', '<ExcThread(monitor, started 140417177745152)>']
[2024-09-29 02:18:10] 2024-09-29 00:18:04,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-29 02:18:10] 2024-09-29 00:18:04,251 | INFO     | [monitor] control thread has ended
[2024-09-29 02:18:10] 2024-09-29 00:18:09,151 | INFO     | all workflow threads have been joined
[2024-09-29 02:18:10] 2024-09-29 00:18:09,152 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-29 02:18:10] 2024-09-29 00:18:09,152 | INFO     | traces error code: 0
[2024-09-29 02:18:10] 2024-09-29 00:18:09,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-29 02:18:10] 2024-09-29 00:18:09,557 [wrapper] ==== pilot stdout END ====
[2024-09-29 02:18:10] 2024-09-29 00:18:09,567 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-29 02:18:10] 2024-09-29 00:18:09,582 [wrapper] pilotpid: 7113
[2024-09-29 02:18:10] 2024-09-29 00:18:09,672 [wrapper] Pilot exit status: 0
[2024-09-29 02:18:10] 2024-09-29 00:18:09,713 [wrapper] pandaids: 6349947212
[2024-09-29 02:18:10] 2024-09-29 00:18:09,764 [wrapper] cleanup supervisor_pilot 27424 7114
[2024-09-29 02:18:10] 2024-09-29 00:18:09,780 [wrapper] Test setup, not cleaning
[2024-09-29 02:18:10] 2024-09-29 00:18:09,784 [wrapper] ==== wrapper stdout END ====
[2024-09-29 02:18:10] 2024-09-29 00:18:09,790 [wrapper] ==== wrapper stderr END ====
[2024-09-29 02:18:10] 2024-09-29 00:18:09,797 [wrapper] apfmon messages muted
[2024-09-29 02:18:10]  *** Error codes and diagnostics ***
[2024-09-29 02:18:10]     "exeErrorCode": 0,
[2024-09-29 02:18:10]     "exeErrorDiag": "",
[2024-09-29 02:18:10]     "pilotErrorCode": 0,
[2024-09-29 02:18:10]     "pilotErrorDiag": "",
[2024-09-29 02:18:10]  *** Listing of results directory ***
[2024-09-29 02:18:10] total 588872
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc    484599 Sep 28 11:20 pilot3.tar.gz
[2024-09-29 02:18:10] -rwx------. 1 boinc boinc     33814 Sep 28 11:22 runpilot2-wrapper.sh
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc      5653 Sep 28 11:22 queuedata.json
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc       100 Sep 28 22:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-29 02:18:10] -rwxr-xr-x. 1 boinc boinc      7986 Sep 28 22:47 run_atlas
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc       105 Sep 28 22:47 job.xml
[2024-09-29 02:18:10] -rw-r--r--. 2 boinc boinc 442138059 Sep 28 22:47 EVNT.41081629._000034.pool.root.1
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc      6363 Sep 28 22:47 init_data.xml
[2024-09-29 02:18:10] -rw-r--r--. 2 boinc boinc     17537 Sep 28 22:47 start_atlas.sh
[2024-09-29 02:18:10] drwxrwx--x. 2 boinc boinc        68 Sep 28 22:47 shared
[2024-09-29 02:18:10] -rw-r--r--. 2 boinc boinc    498175 Sep 28 22:47 input.tar.gz
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc         0 Sep 28 22:47 boinc_lockfile
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc      2564 Sep 28 22:47 pandaJob.out
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc       424 Sep 28 22:47 setup.sh.local
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc   1012088 Sep 28 22:49 agis_schedconf.cvmfs.json
[2024-09-29 02:18:10] drwx------. 4 boinc boinc      4096 Sep 28 22:49 pilot3
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc 154129554 Sep 29 02:16 HITS.41081631._000849.pool.root.1
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc       532 Sep 29 02:16 boinc_task_state.xml
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc      1019 Sep 29 02:17 memory_monitor_summary.json
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc   1615815 Sep 29 02:17 agis_ddmendpoints.agis.ALL.json
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc    360052 Sep 29 02:17 log.41081631._000849.job.log.tgz.1
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc        95 Sep 29 02:17 pilot_heartbeat.json
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc      8192 Sep 29 02:17 boinc_mmap_file
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc        28 Sep 29 02:17 wrapper_checkpoint.txt
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc      7688 Sep 29 02:17 heartbeat.json
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc      4274 Sep 29 02:18 pilotlog.txt
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc   1086449 Sep 29 02:18 log.41081631._000849.job.log.1
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc       357 Sep 29 02:18 output.list
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc       620 Sep 29 02:18 runtime_log
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc   1464320 Sep 29 02:18 result.tar.gz
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc     11047 Sep 29 02:18 runtime_log.err
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc       660 Sep 29 02:18 NjmMDm4piE6n9Rq4apOajLDm4fhM0noT9bVorHsSDmxFaKDmhmq0Lo.diag
[2024-09-29 02:18:10] -rw-r--r--. 1 boinc boinc     21506 Sep 29 02:18 stderr.txt
[2024-09-29 02:18:10] HITS file was successfully produced:
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc 154129554 Sep 29 02:16 shared/HITS.pool.root.1
[2024-09-29 02:18:10]  *** Contents of shared directory: ***
[2024-09-29 02:18:10] total 584236
[2024-09-29 02:18:10] -rw-r--r--. 2 boinc boinc 442138059 Sep 28 22:47 ATLAS.root_0
[2024-09-29 02:18:10] -rw-r--r--. 2 boinc boinc     17537 Sep 28 22:47 start_atlas.sh
[2024-09-29 02:18:10] -rw-r--r--. 2 boinc boinc    498175 Sep 28 22:47 input.tar.gz
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc 154129554 Sep 29 02:16 HITS.pool.root.1
[2024-09-29 02:18:10] -rw-------. 1 boinc boinc   1464320 Sep 29 02:18 result.tar.gz
02:18:12 (2032): run_atlas exited; CPU time 41900.080224
02:18:12 (2032): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN