Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:45:03 (24694): wrapper (7.7.26015): starting
19:45:03 (24694): wrapper: running run_atlas (--nthreads 8)
[2024-09-28 19:45:03] Arguments: --nthreads 8
[2024-09-28 19:45:03] Threads: 8
[2024-09-28 19:45:03] Checking for CVMFS
[2024-09-28 19:45:04] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-28 19:45:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-28 19:45:05] Running cvmfs_config stat atlas.cern.ch
[2024-09-28 19:45:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-28 19:45:05] 2.11.2.0 14778 47413 74664 137752 3 60 15867975 25165825 4152 130560 0 33358089 99.946 17623442 9064 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-09-28 19:45:05] CVMFS is ok
[2024-09-28 19:45:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-28 19:45:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-28 19:45:05] Further information can be found at the LHC@home message board.
[2024-09-28 19:45:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-28 19:45:05] Checking for apptainer binary...
[2024-09-28 19:45:05] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-28 19:45:05] Running /usr/bin/apptainer --version
[2024-09-28 19:45:06] apptainer version 1.3.2-1.el7
[2024-09-28 19:45:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-28 20:01:54] cg-vwn434.simple-grid.lan
[2024-09-28 20:01:54] apptainer works
[2024-09-28 20:01:54] Set ATHENA_PROC_NUMBER=8
[2024-09-28 20:01:54] Set ATHENA_CORE_NUMBER=8
[2024-09-28 20:01:55] Starting ATLAS job with PandaID=6349538544
[2024-09-28 20:01:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-28 23:52:14]  *** The last 200 lines of the pilot log: ***
[2024-09-28 23:52:14] 2024-09-28 21:51:48,358 | INFO     | current chi2=9.446345609469883 (change=6.8969550009349305 %)
[2024-09-28 23:52:14] 2024-09-28 21:51:48,358 | INFO     | right removable region: 208
[2024-09-28 23:52:14] 2024-09-28 21:51:48,358 | INFO     | model: linear, x: [1727547517.0, 1727547578.0, 1727547639.0, 1727547700.0, 1727547761.0, 1727547822.0, 1727547883.0, 1727547944.0, 1727548005.0, 1727548066.0, 1727
[2024-09-28 23:52:14] 2024-09-28 21:51:48,358 | INFO     | sum of square deviations: 2830787960.0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,360 | INFO     | sum of deviations: 45210185746.0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,360 | INFO     | mean x: 1727553861.0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,360 | INFO     | mean y: 2492316.0813397127
[2024-09-28 23:52:14] 2024-09-28 21:51:48,360 | INFO     | -- intersect: -27588069762.62323
[2024-09-28 23:52:14] 2024-09-28 21:51:48,360 | INFO     | intersect: -27588069762.62323
[2024-09-28 23:52:14] 2024-09-28 21:51:48,360 | INFO     | chi2: 5.000073368727257
[2024-09-28 23:52:14] 2024-09-28 21:51:48,360 | INFO     | current chi2=5.000073368727257 (change=50.71934956724866 %)
[2024-09-28 23:52:14] 2024-09-28 21:51:48,361 | INFO     | model: linear, x: [1727547822.0, 1727547883.0, 1727547944.0, 1727548005.0, 1727548066.0, 1727548127.0, 1727548188.0, 1727548249.0, 1727548310.0, 1727548371.0, 1727
[2024-09-28 23:52:14] 2024-09-28 21:51:48,361 | INFO     | sum of square deviations: 2632440055.0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,362 | INFO     | sum of deviations: -2788421111.500002
[2024-09-28 23:52:14] 2024-09-28 21:51:48,362 | INFO     | mean x: 1727554013.5
[2024-09-28 23:52:14] 2024-09-28 21:51:48,362 | INFO     | mean y: 2529177.5343137253
[2024-09-28 23:52:14] 2024-09-28 21:51:48,362 | INFO     | -- intersect: 1832446661.638224
[2024-09-28 23:52:14] 2024-09-28 21:51:48,362 | INFO     | intersect: 1832446661.638224
[2024-09-28 23:52:14] 2024-09-28 21:51:48,363 | INFO     | chi2: 2.9144119320006916
[2024-09-28 23:52:14] 2024-09-28 21:51:48,363 | INFO     | current chi2=2.9144119320006916 (change=41.71261665421241 %)
[2024-09-28 23:52:14] 2024-09-28 21:51:48,363 | INFO     | model: linear, x: [1727548127.0, 1727548188.0, 1727548249.0, 1727548310.0, 1727548371.0, 1727548432.0, 1727548493.0, 1727548554.0, 1727548615.0, 1727548676.0, 1727
[2024-09-28 23:52:14] 2024-09-28 21:51:48,363 | INFO     | sum of square deviations: 2443580700.0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,365 | INFO     | sum of deviations: -43604446756.0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,365 | INFO     | mean x: 1727554166.0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,366 | INFO     | mean y: 2562139.0351758795
[2024-09-28 23:52:14] 2024-09-28 21:51:48,366 | INFO     | -- intersect: 30829881919.98327
[2024-09-28 23:52:14] 2024-09-28 21:51:48,366 | INFO     | intersect: 30829881919.98327
[2024-09-28 23:52:14] 2024-09-28 21:51:48,367 | INFO     | chi2: 1.4048147378749645
[2024-09-28 23:52:14] 2024-09-28 21:51:48,367 | INFO     | current chi2=1.4048147378749645 (change=51.79766036331781 %)
[2024-09-28 23:52:14] 2024-09-28 21:51:48,367 | INFO     | model: linear, x: [1727548432.0, 1727548493.0, 1727548554.0, 1727548615.0, 1727548676.0, 1727548737.0, 1727548798.0, 1727548859.0, 1727548920.0, 1727548981.0, 1727
[2024-09-28 23:52:14] 2024-09-28 21:51:48,368 | INFO     | sum of square deviations: 2263977332.5
[2024-09-28 23:52:14] 2024-09-28 21:51:48,369 | INFO     | sum of deviations: -61308722525.0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,369 | INFO     | mean x: 1727554318.5
[2024-09-28 23:52:14] 2024-09-28 21:51:48,369 | INFO     | mean y: 2577038.154639175
[2024-09-28 23:52:14] 2024-09-28 21:51:48,369 | INFO     | -- intersect: 46784913079.84377
[2024-09-28 23:52:14] 2024-09-28 21:51:48,369 | INFO     | intersect: 46784913079.84377
[2024-09-28 23:52:14] 2024-09-28 21:51:48,370 | INFO     | chi2: 0.9449389693770289
[2024-09-28 23:52:14] 2024-09-28 21:51:48,370 | INFO     | current chi2=0.9449389693770289 (change=32.73568792377424 %)
[2024-09-28 23:52:14] 2024-09-28 21:51:48,370 | INFO     | model: linear, x: [1727548737.0, 1727548798.0, 1727548859.0, 1727548920.0, 1727548981.0, 1727549042.0, 1727549103.0, 1727549164.0, 1727549225.0, 1727549286.0, 1727
[2024-09-28 23:52:14] 2024-09-28 21:51:48,370 | INFO     | sum of square deviations: 2093397390.0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,371 | INFO     | sum of deviations: -60623329635.999985
[2024-09-28 23:52:14] 2024-09-28 21:51:48,372 | INFO     | mean x: 1727554471.0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,372 | INFO     | mean y: 2576388.6402116404
[2024-09-28 23:52:14] 2024-09-28 21:51:48,372 | INFO     | -- intersect: 50031350027.06468
[2024-09-28 23:52:14] 2024-09-28 21:51:48,372 | INFO     | intersect: 50031350027.06468
[2024-09-28 23:52:14] 2024-09-28 21:51:48,372 | INFO     | chi2: 0.927593643751404
[2024-09-28 23:52:14] 2024-09-28 21:51:48,372 | INFO     | current chi2=0.927593643751404 (change=1.8356027413135727 %)
[2024-09-28 23:52:14] 2024-09-28 21:51:48,372 | INFO     | left removable region: 50
[2024-09-28 23:52:14] 2024-09-28 21:51:48,373 | INFO     | model: linear, x: [1727550262.0, 1727550323.0, 1727550384.0, 1727550445.0, 1727550506.0, 1727550567.0, 1727550628.0, 1727550689.0, 1727550750.0, 1727550811.0, 1727
[2024-09-28 23:52:14] 2024-09-28 21:51:48,373 | INFO     | sum of square deviations: 1223016419.5
[2024-09-28 23:52:14] 2024-09-28 21:51:48,374 | INFO     | sum of deviations: -27426819420.5
[2024-09-28 23:52:14] 2024-09-28 21:51:48,374 | INFO     | mean x: 1727555050.5
[2024-09-28 23:52:14] 2024-09-28 21:51:48,374 | INFO     | mean y: 2568726.7784810127
[2024-09-28 23:52:14] 2024-09-28 21:51:48,374 | INFO     | -- intersect: 38743945909.92942
[2024-09-28 23:52:14] 2024-09-28 21:51:48,374 | INFO     | intersect: 38743945909.92942
[2024-09-28 23:52:14] 2024-09-28 21:51:48,374 | INFO     | chi2: 0.12484792560707013
[2024-09-28 23:52:14] 2024-09-28 21:51:48,375 | INFO     | -- intersect: 38743945909.92942
[2024-09-28 23:52:14] 2024-09-28 21:51:48,375 | INFO     | current memory leak: -22.43 B/s (using 158 data points, chi2=0.12)
[2024-09-28 23:52:14] 2024-09-28 21:51:48,377 | INFO     | ..............................
[2024-09-28 23:52:14] 2024-09-28 21:51:48,377 | INFO     | . Timing measurements:
[2024-09-28 23:52:14] 2024-09-28 21:51:48,377 | INFO     | . get job = 0 s
[2024-09-28 23:52:14] 2024-09-28 21:51:48,377 | INFO     | . initial setup = 5 s
[2024-09-28 23:52:14] 2024-09-28 21:51:48,377 | INFO     | . payload setup = 125 s
[2024-09-28 23:52:14] 2024-09-28 21:51:48,377 | INFO     | . stage-in = 0 s
[2024-09-28 23:52:14] 2024-09-28 21:51:48,377 | INFO     | . payload execution = 13157 s
[2024-09-28 23:52:14] 2024-09-28 21:51:48,377 | INFO     | . stage-out = 4 s
[2024-09-28 23:52:14] 2024-09-28 21:51:48,378 | INFO     | . log creation = 1 s
[2024-09-28 23:52:14] 2024-09-28 21:51:48,378 | INFO     | ..............................
[2024-09-28 23:52:14] 2024-09-28 21:51:48,620 | INFO     | 
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | job summary report
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | --------------------------------------------------
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | PanDA job id: 6349538544
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | task id: 41079445
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | errors: (none)
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | pilot state: finished 
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | transexitcode: 0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | exeerrorcode: 0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | exeerrordiag: 
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | exitcode: 0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,621 | INFO     | exitmsg: OK
[2024-09-28 23:52:14] 2024-09-28 21:51:48,622 | INFO     | cpuconsumptiontime: 45639 s
[2024-09-28 23:52:14] 2024-09-28 21:51:48,622 | INFO     | nevents: 400
[2024-09-28 23:52:14] 2024-09-28 21:51:48,622 | INFO     | neventsw: 0
[2024-09-28 23:52:14] 2024-09-28 21:51:48,622 | INFO     | pid: 16396
[2024-09-28 23:52:14] 2024-09-28 21:51:48,622 | INFO     | pgrp: 16396
[2024-09-28 23:52:14] 2024-09-28 21:51:48,622 | INFO     | corecount: 8
[2024-09-28 23:52:14] 2024-09-28 21:51:48,622 | INFO     | event service: False
[2024-09-28 23:52:14] 2024-09-28 21:51:48,622 | INFO     | sizes: {0: 2433988, 1: 2435353, 2: 2435552, 13: 2435552, 24: 2435608, 35: 2435636, 46: 2435792, 56: 2435820, 67: 2435848, 78: 2435876, 89: 2435932, 92: 2436446, 10
[2024-09-28 23:52:14] 2024-09-28 21:51:48,622 | INFO     | --------------------------------------------------
[2024-09-28 23:52:14] 2024-09-28 21:51:48,622 | INFO     | 
[2024-09-28 23:52:14] 2024-09-28 21:51:48,622 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2024-09-28 23:52:14] 2024-09-28 21:51:48,915 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,916 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,916 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,916 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,917 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,918 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-28 23:52:14] 2024-09-28 21:51:48,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,918 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-28 23:52:14] 2024-09-28 21:51:48,919 | INFO     | job 6349538544 has completed (purged errors)
[2024-09-28 23:52:14] 2024-09-28 21:51:48,919 | INFO     | overall cleanup function is called
[2024-09-28 23:52:14] 2024-09-28 21:51:49,931 | INFO     | --- collectZombieJob: --- 10, [16396]
[2024-09-28 23:52:14] 2024-09-28 21:51:49,932 | INFO     | zombie collector waiting for pid 16396
[2024-09-28 23:52:14] 2024-09-28 21:51:49,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-28 23:52:14] 2024-09-28 21:51:49,933 | INFO     | collected zombie processes
[2024-09-28 23:52:14] 2024-09-28 21:51:49,933 | INFO     | will  attempt to kill all subprocesses of pid=16396
[2024-09-28 23:52:14] 2024-09-28 21:51:50,458 | INFO     | process IDs to be killed: [16396] (in reverse order)
[2024-09-28 23:52:14] 2024-09-28 21:51:51,330 | WARNING  | found no corresponding commands to process id(s)
[2024-09-28 23:52:14] 2024-09-28 21:51:51,331 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-28 23:52:14] 2024-09-28 21:51:51,334 | INFO     | did not find any defunct processes belonging to 16396
[2024-09-28 23:52:14] 2024-09-28 21:51:51,339 | INFO     | did not find any defunct processes belonging to 16396
[2024-09-28 23:52:14] 2024-09-28 21:51:51,339 | INFO     | ready for new job
[2024-09-28 23:52:14] 2024-09-28 21:51:51,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-28 23:52:14] 2024-09-28 21:51:51,342 | INFO     | *************************************
[2024-09-28 23:52:14] 2024-09-28 21:51:51,342 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-09-28 23:52:14] 2024-09-28 21:51:51,342 | INFO     | *************************************
[2024-09-28 23:52:14] 2024-09-28 21:51:51,343 | INFO     | 
[2024-09-28 23:52:14] 2024-09-28 21:51:51,351 | INFO     | pilot is running in a VM
[2024-09-28 23:52:14] 2024-09-28 21:51:51,351 | INFO     | architecture information:
[2024-09-28 23:52:14] 2024-09-28 21:51:51,366 | INFO     | executing command: cat /etc/os-release
[2024-09-28 23:52:14] 2024-09-28 21:51:51,520 | INFO     | cat /etc/os-release:
[2024-09-28 23:52:14] NAME="CentOS Linux"
[2024-09-28 23:52:14] VERSION="7 (Core)"
[2024-09-28 23:52:14] ID="centos"
[2024-09-28 23:52:14] ID_LIKE="rhel fedora"
[2024-09-28 23:52:14] VERSION_ID="7"
[2024-09-28 23:52:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-28 23:52:14] ANSI_COLOR="0;31"
[2024-09-28 23:52:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-28 23:52:14] HOME_URL="https://www.centos.org/"
[2024-09-28 23:52:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-28 23:52:14] 
[2024-09-28 23:52:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-28 23:52:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-28 23:52:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-28 23:52:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-28 23:52:14] 
[2024-09-28 23:52:14] 2024-09-28 21:51:51,521 | INFO     | *************************************
[2024-09-28 23:52:14] 2024-09-28 21:51:52,025 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2024-09-28 23:52:14] 2024-09-28 21:51:52,256 | INFO     | sufficient remaining disk space (487791263744 B)
[2024-09-28 23:52:14] 2024-09-28 21:51:52,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-28 23:52:14] 2024-09-28 21:51:52,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-28 23:52:14] 2024-09-28 21:51:52,258 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-28 23:52:14] 2024-09-28 21:51:52,258 | INFO     | found 0 job(s) in 20 queues
[2024-09-28 23:52:14] 2024-09-28 21:51:52,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-28 23:52:14] 2024-09-28 21:51:52,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-28 23:52:14] 2024-09-28 21:51:52,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-28 23:52:14] 2024-09-28 21:51:52,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-28 23:52:14] 2024-09-28 21:51:52,536 | INFO     | aborting loop
[2024-09-28 23:52:14] 2024-09-28 21:51:52,848 | INFO     | all data control threads have been joined
[2024-09-28 23:52:14] 2024-09-28 21:51:52,903 | INFO     | all payload control threads have been joined
[2024-09-28 23:52:14] 2024-09-28 21:51:53,264 | INFO     | [job] retrieve thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:53,357 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:53,463 | INFO     | [payload] validate_pre thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:53,509 | INFO     | all job control threads have been joined
[2024-09-28 23:52:14] 2024-09-28 21:51:53,543 | INFO     | [job] job monitor thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:53,617 | INFO     | [job] validate thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:53,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-28 23:52:14] 2024-09-28 21:51:53,675 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-28 23:52:14] 2024-09-28 21:51:53,854 | INFO     | [data] control thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:53,910 | INFO     | [payload] control thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:54,014 | INFO     | [payload] execute_payloads thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:54,273 | INFO     | [job] create_data_payload thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:54,295 | INFO     | [data] copytool_in thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:54,514 | INFO     | [job] control thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:54,641 | INFO     | [job] queue monitor thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:54,658 | INFO     | [payload] failed_post thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:54,764 | INFO     | [payload] validate_post thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:55,683 | INFO     | [data] copytool_out thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:56,271 | INFO     | [data] queue_monitor thread has finished
[2024-09-28 23:52:14] 2024-09-28 21:51:57,579 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152368146240)>', '<ExcThread(monitor, started 140151418251008)>']
[2024-09-28 23:52:14] 2024-09-28 21:51:58,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-28 23:52:14] 2024-09-28 21:51:58,294 | INFO     | [monitor] control thread has ended
[2024-09-28 23:52:14] 2024-09-28 21:52:02,605 | INFO     | all workflow threads have been joined
[2024-09-28 23:52:14] 2024-09-28 21:52:02,606 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-28 23:52:14] 2024-09-28 21:52:02,606 | INFO     | traces error code: 0
[2024-09-28 23:52:14] 2024-09-28 21:52:02,606 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-28 23:52:14] 2024-09-28 21:52:03,213 [wrapper] ==== pilot stdout END ====
[2024-09-28 23:52:14] 2024-09-28 21:52:03,303 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-28 23:52:14] 2024-09-28 21:52:03,397 [wrapper] pilotpid: 3530
[2024-09-28 23:52:14] 2024-09-28 21:52:03,509 [wrapper] Pilot exit status: 0
[2024-09-28 23:52:14] 2024-09-28 21:52:04,055 [wrapper] pandaids: 6349538544
[2024-09-28 23:52:14] 2024-09-28 21:52:04,404 [wrapper] cleanup supervisor_pilot  9987 3531
[2024-09-28 23:52:14] 2024-09-28 21:52:04,532 [wrapper] Test setup, not cleaning
[2024-09-28 23:52:14] 2024-09-28 21:52:04,652 [wrapper] ==== wrapper stdout END ====
[2024-09-28 23:52:14] 2024-09-28 21:52:04,752 [wrapper] ==== wrapper stderr END ====
[2024-09-28 23:52:14] 2024-09-28 21:52:04,962 [wrapper] apfmon messages muted
[2024-09-28 23:52:14]  *** Error codes and diagnostics ***
[2024-09-28 23:52:14]     "exeErrorCode": 0,
[2024-09-28 23:52:14]     "exeErrorDiag": "",
[2024-09-28 23:52:14]     "pilotErrorCode": 0,
[2024-09-28 23:52:14]     "pilotErrorDiag": "",
[2024-09-28 23:52:14]  *** Listing of results directory ***
[2024-09-28 23:52:14] total 588052
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc    484599 Sep 28 03:48 pilot3.tar.gz
[2024-09-28 23:52:14] -rwx------. 1 boinc boinc     33814 Sep 28 03:58 runpilot2-wrapper.sh
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc      5653 Sep 28 03:59 queuedata.json
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc       100 Sep 28 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-28 23:52:14] -rwxr-xr-x. 1 boinc boinc      7986 Sep 28 19:45 run_atlas
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc       105 Sep 28 19:45 job.xml
[2024-09-28 23:52:14] -rw-r--r--. 2 boinc boinc 441488173 Sep 28 19:45 EVNT.41079443._000051.pool.root.1
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc      6347 Sep 28 19:45 init_data.xml
[2024-09-28 23:52:14] -rw-r--r--. 2 boinc boinc     17537 Sep 28 19:45 start_atlas.sh
[2024-09-28 23:52:14] drwxrwx--x. 2 boinc boinc        68 Sep 28 19:45 shared
[2024-09-28 23:52:14] -rw-r--r--. 2 boinc boinc    498173 Sep 28 19:45 input.tar.gz
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc         0 Sep 28 19:45 boinc_lockfile
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc      2580 Sep 28 20:01 pandaJob.out
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc       424 Sep 28 20:02 setup.sh.local
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc   1012096 Sep 28 20:05 agis_schedconf.cvmfs.json
[2024-09-28 23:52:14] drwx------. 4 boinc boinc      4096 Sep 28 20:05 pilot3
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc 153851654 Sep 28 23:48 HITS.41079445._000370.pool.root.1
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc       531 Sep 28 23:49 boinc_task_state.xml
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc      1015 Sep 28 23:50 memory_monitor_summary.json
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc   1615815 Sep 28 23:50 agis_ddmendpoints.agis.ALL.json
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc    369432 Sep 28 23:50 log.41079445._000370.job.log.tgz.1
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc        95 Sep 28 23:51 pilot_heartbeat.json
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc      7695 Sep 28 23:51 heartbeat.json
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc      4397 Sep 28 23:52 pilotlog.txt
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc   1119482 Sep 28 23:52 log.41079445._000370.job.log.1
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc       357 Sep 28 23:52 output.list
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc       620 Sep 28 23:52 runtime_log
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc   1505280 Sep 28 23:52 result.tar.gz
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc     10999 Sep 28 23:52 runtime_log.err
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc       645 Sep 28 23:52 oEnLDmIubE6n7OlckoGmwREmGgkVDo1bjSoqOlfODm3XrKDmc94xKo.diag
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc      8192 Sep 28 23:52 boinc_mmap_file
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc        28 Sep 28 23:52 wrapper_checkpoint.txt
[2024-09-28 23:52:14] -rw-r--r--. 1 boinc boinc     21593 Sep 28 23:52 stderr.txt
[2024-09-28 23:52:14] HITS file was successfully produced:
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc 153851654 Sep 28 23:48 shared/HITS.pool.root.1
[2024-09-28 23:52:14]  *** Contents of shared directory: ***
[2024-09-28 23:52:14] total 583372
[2024-09-28 23:52:14] -rw-r--r--. 2 boinc boinc 441488173 Sep 28 19:45 ATLAS.root_0
[2024-09-28 23:52:14] -rw-r--r--. 2 boinc boinc     17537 Sep 28 19:45 start_atlas.sh
[2024-09-28 23:52:14] -rw-r--r--. 2 boinc boinc    498173 Sep 28 19:45 input.tar.gz
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc 153851654 Sep 28 23:48 HITS.pool.root.1
[2024-09-28 23:52:14] -rw-------. 1 boinc boinc   1505280 Sep 28 23:52 result.tar.gz
23:52:16 (24694): run_atlas exited; CPU time 45546.250155
23:52:16 (24694): called boinc_finish(0)

</stderr_txt>
]]>

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