Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:49:41 (14566): wrapper (7.7.26015): starting
19:49:41 (14566): wrapper: running run_atlas (--nthreads 8)
[2024-09-28 19:49:41] Arguments: --nthreads 8
[2024-09-28 19:49:41] Threads: 8
[2024-09-28 19:49:41] Checking for CVMFS
[2024-09-28 19:49:42] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-28 19:49:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-28 19:49:42] Running cvmfs_config stat atlas.cern.ch
[2024-09-28 19:49:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-28 19:49:43] 2.11.2.0 30414 77891 74748 137752 2 60 14786640 25165824 4151 130560 0 55724068 99.944 27067668 9099 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-09-28 19:49:43] CVMFS is ok
[2024-09-28 19:49:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-28 19:49:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-28 19:49:43] Further information can be found at the LHC@home message board.
[2024-09-28 19:49:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-28 19:49:43] Checking for apptainer binary...
[2024-09-28 19:49:43] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-28 19:49:43] Running /usr/bin/apptainer --version
[2024-09-28 19:49:44] apptainer version 1.3.2-1.el7
[2024-09-28 19:49:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-28 19:49:53] cg-vwn414.simple-grid.lan
[2024-09-28 19:49:53] apptainer works
[2024-09-28 19:49:53] Set ATHENA_PROC_NUMBER=8
[2024-09-28 19:49:53] Set ATHENA_CORE_NUMBER=8
[2024-09-28 19:49:53] Starting ATLAS job with PandaID=6349540867
[2024-09-28 19:49:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-28 23:56:11]  *** The last 200 lines of the pilot log: ***
[2024-09-28 23:56:11] 2024-09-28 21:42:37,931 | INFO     | current chi2=10.752237353376184 (change=6.319122880665414 %)
[2024-09-28 23:56:11] 2024-09-28 21:42:37,932 | INFO     | right removable region: 210
[2024-09-28 23:56:11] 2024-09-28 21:42:37,932 | INFO     | model: linear, x: [1727546803.0, 1727546864.0, 1727546925.0, 1727546986.0, 1727547047.0, 1727547108.0, 1727547169.0, 1727547230.0, 1727547291.0, 1727547352.0, 1727
[2024-09-28 23:56:11] 2024-09-28 21:42:37,932 | INFO     | sum of square deviations: 2912836010.0
[2024-09-28 23:56:11] 2024-09-28 21:42:37,936 | INFO     | sum of deviations: 114594912137.00006
[2024-09-28 23:56:11] 2024-09-28 21:42:37,937 | INFO     | mean x: 1727553208.0
[2024-09-28 23:56:11] 2024-09-28 21:42:37,937 | INFO     | mean y: 2424165.6113744075
[2024-09-28 23:56:11] 2024-09-28 21:42:37,937 | INFO     | -- intersect: -67961857861.63279
[2024-09-28 23:56:11] 2024-09-28 21:42:37,938 | INFO     | intersect: -67961857861.63279
[2024-09-28 23:56:11] 2024-09-28 21:42:37,938 | INFO     | chi2: 6.361312451983402
[2024-09-28 23:56:11] 2024-09-28 21:42:37,939 | INFO     | current chi2=6.361312451983402 (change=44.575876578391565 %)
[2024-09-28 23:56:11] 2024-09-28 21:42:37,940 | INFO     | model: linear, x: [1727547108.0, 1727547169.0, 1727547230.0, 1727547291.0, 1727547352.0, 1727547413.0, 1727547474.0, 1727547535.0, 1727547596.0, 1727547657.0, 1727
[2024-09-28 23:56:11] 2024-09-28 21:42:37,940 | INFO     | sum of square deviations: 2710627567.5
[2024-09-28 23:56:11] 2024-09-28 21:42:37,943 | INFO     | sum of deviations: 60739772627.499985
[2024-09-28 23:56:11] 2024-09-28 21:42:37,944 | INFO     | mean x: 1727553360.5
[2024-09-28 23:56:11] 2024-09-28 21:42:37,944 | INFO     | mean y: 2464734.2572815535
[2024-09-28 23:56:11] 2024-09-28 21:42:37,944 | INFO     | -- intersect: -38708570148.12647
[2024-09-28 23:56:11] 2024-09-28 21:42:37,944 | INFO     | intersect: -38708570148.12647
[2024-09-28 23:56:11] 2024-09-28 21:42:37,945 | INFO     | chi2: 3.76515064287434
[2024-09-28 23:56:11] 2024-09-28 21:42:37,945 | INFO     | current chi2=3.76515064287434 (change=40.811732306901554 %)
[2024-09-28 23:56:11] 2024-09-28 21:42:37,945 | INFO     | model: linear, x: [1727547413.0, 1727547474.0, 1727547535.0, 1727547596.0, 1727547657.0, 1727547718.0, 1727547779.0, 1727547840.0, 1727547901.0, 1727547962.0, 1727
[2024-09-28 23:56:11] 2024-09-28 21:42:37,946 | INFO     | sum of square deviations: 2518000700.0
[2024-09-28 23:56:11] 2024-09-28 21:42:37,949 | INFO     | sum of deviations: 18967013894.000004
[2024-09-28 23:56:11] 2024-09-28 21:42:37,950 | INFO     | mean x: 1727553513.0
[2024-09-28 23:56:11] 2024-09-28 21:42:37,950 | INFO     | mean y: 2497808.5174129354
[2024-09-28 23:56:11] 2024-09-28 21:42:37,950 | INFO     | -- intersect: -13010418146.470018
[2024-09-28 23:56:11] 2024-09-28 21:42:37,951 | INFO     | intersect: -13010418146.470018
[2024-09-28 23:56:11] 2024-09-28 21:42:37,951 | INFO     | chi2: 2.237799183388822
[2024-09-28 23:56:11] 2024-09-28 21:42:37,952 | INFO     | current chi2=2.237799183388822 (change=40.56548075642275 %)
[2024-09-28 23:56:11] 2024-09-28 21:42:37,952 | INFO     | model: linear, x: [1727547718.0, 1727547779.0, 1727547840.0, 1727547901.0, 1727547962.0, 1727548023.0, 1727548084.0, 1727548145.0, 1727548206.0, 1727548267.0, 1727
[2024-09-28 23:56:11] 2024-09-28 21:42:37,953 | INFO     | sum of square deviations: 2334722845.0
[2024-09-28 23:56:11] 2024-09-28 21:42:37,955 | INFO     | sum of deviations: -17775232585.5
[2024-09-28 23:56:11] 2024-09-28 21:42:37,955 | INFO     | mean x: 1727553665.5
[2024-09-28 23:56:11] 2024-09-28 21:42:37,955 | INFO     | mean y: 2528261.4846938774
[2024-09-28 23:56:11] 2024-09-28 21:42:37,956 | INFO     | -- intersect: 13155125056.414145
[2024-09-28 23:56:11] 2024-09-28 21:42:37,956 | INFO     | intersect: 13155125056.414145
[2024-09-28 23:56:11] 2024-09-28 21:42:37,956 | INFO     | chi2: 0.9266705163668
[2024-09-28 23:56:11] 2024-09-28 21:42:37,956 | INFO     | current chi2=0.9266705163668 (change=58.59009498057408 %)
[2024-09-28 23:56:11] 2024-09-28 21:42:37,957 | INFO     | model: linear, x: [1727548023.0, 1727548084.0, 1727548145.0, 1727548206.0, 1727548267.0, 1727548328.0, 1727548389.0, 1727548450.0, 1727548511.0, 1727548572.0, 1727
[2024-09-28 23:56:11] 2024-09-28 21:42:37,957 | INFO     | sum of square deviations: 2160561440.0
[2024-09-28 23:56:11] 2024-09-28 21:42:37,958 | INFO     | sum of deviations: -27271891895.0
[2024-09-28 23:56:11] 2024-09-28 21:42:37,958 | INFO     | mean x: 1727553818.0
[2024-09-28 23:56:11] 2024-09-28 21:42:37,959 | INFO     | mean y: 2536524.1361256544
[2024-09-28 23:56:11] 2024-09-28 21:42:37,959 | INFO     | -- intersect: 21808748601.72023
[2024-09-28 23:56:11] 2024-09-28 21:42:37,959 | INFO     | intersect: 21808748601.72023
[2024-09-28 23:56:11] 2024-09-28 21:42:37,959 | INFO     | chi2: 0.8094990686669765
[2024-09-28 23:56:11] 2024-09-28 21:42:37,959 | INFO     | current chi2=0.8094990686669765 (change=12.644348301834176 %)
[2024-09-28 23:56:11] 2024-09-28 21:42:37,959 | INFO     | left removable region: 50
[2024-09-28 23:56:11] 2024-09-28 21:42:37,960 | INFO     | model: linear, x: [1727549548.0, 1727549609.0, 1727549670.0, 1727549731.0, 1727549792.0, 1727549853.0, 1727549914.0, 1727549975.0, 1727550036.0, 1727550097.0, 1727
[2024-09-28 23:56:11] 2024-09-28 21:42:37,960 | INFO     | sum of square deviations: 1270051720.0
[2024-09-28 23:56:11] 2024-09-28 21:42:37,961 | INFO     | sum of deviations: -11144587211.0
[2024-09-28 23:56:11] 2024-09-28 21:42:37,961 | INFO     | mean x: 1727554397.5
[2024-09-28 23:56:11] 2024-09-28 21:42:37,962 | INFO     | mean y: 2545814.625
[2024-09-28 23:56:11] 2024-09-28 21:42:37,962 | INFO     | -- intersect: 15161677007.081722
[2024-09-28 23:56:11] 2024-09-28 21:42:37,962 | INFO     | intersect: 15161677007.081722
[2024-09-28 23:56:11] 2024-09-28 21:42:37,962 | INFO     | chi2: 0.013390143214518943
[2024-09-28 23:56:11] 2024-09-28 21:42:37,962 | INFO     | -- intersect: 15161677007.081722
[2024-09-28 23:56:11] 2024-09-28 21:42:37,963 | INFO     | current memory leak: -8.77 B/s (using 160 data points, chi2=0.01)
[2024-09-28 23:56:11] 2024-09-28 21:42:37,964 | INFO     | ..............................
[2024-09-28 23:56:11] 2024-09-28 21:42:37,964 | INFO     | . Timing measurements:
[2024-09-28 23:56:11] 2024-09-28 21:42:37,964 | INFO     | . get job = 0 s
[2024-09-28 23:56:11] 2024-09-28 21:42:37,964 | INFO     | . initial setup = 4 s
[2024-09-28 23:56:11] 2024-09-28 21:42:37,964 | INFO     | . payload setup = 138 s
[2024-09-28 23:56:11] 2024-09-28 21:42:37,964 | INFO     | . stage-in = 0 s
[2024-09-28 23:56:11] 2024-09-28 21:42:37,964 | INFO     | . payload execution = 13289 s
[2024-09-28 23:56:11] 2024-09-28 21:42:37,965 | INFO     | . stage-out = 4 s
[2024-09-28 23:56:11] 2024-09-28 21:42:37,965 | INFO     | . log creation = 2 s
[2024-09-28 23:56:11] 2024-09-28 21:42:37,965 | INFO     | ..............................
[2024-09-28 23:56:11] 2024-09-28 21:42:38,126 | INFO     | 
[2024-09-28 23:56:11] 2024-09-28 21:42:38,126 | INFO     | job summary report
[2024-09-28 23:56:11] 2024-09-28 21:42:38,126 | INFO     | --------------------------------------------------
[2024-09-28 23:56:11] 2024-09-28 21:42:38,127 | INFO     | PanDA job id: 6349540867
[2024-09-28 23:56:11] 2024-09-28 21:42:38,127 | INFO     | task id: 41081613
[2024-09-28 23:56:11] 2024-09-28 21:42:38,127 | INFO     | errors: (none)
[2024-09-28 23:56:11] 2024-09-28 21:42:38,127 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-28 23:56:11] 2024-09-28 21:42:38,127 | INFO     | pilot state: finished 
[2024-09-28 23:56:11] 2024-09-28 21:42:38,127 | INFO     | transexitcode: 0
[2024-09-28 23:56:11] 2024-09-28 21:42:38,127 | INFO     | exeerrorcode: 0
[2024-09-28 23:56:11] 2024-09-28 21:42:38,127 | INFO     | exeerrordiag: 
[2024-09-28 23:56:11] 2024-09-28 21:42:38,127 | INFO     | exitcode: 0
[2024-09-28 23:56:11] 2024-09-28 21:42:38,127 | INFO     | exitmsg: OK
[2024-09-28 23:56:11] 2024-09-28 21:42:38,127 | INFO     | cpuconsumptiontime: 45362 s
[2024-09-28 23:56:11] 2024-09-28 21:42:38,128 | INFO     | nevents: 400
[2024-09-28 23:56:11] 2024-09-28 21:42:38,128 | INFO     | neventsw: 0
[2024-09-28 23:56:11] 2024-09-28 21:42:38,128 | INFO     | pid: 26799
[2024-09-28 23:56:11] 2024-09-28 21:42:38,128 | INFO     | pgrp: 26799
[2024-09-28 23:56:11] 2024-09-28 21:42:38,128 | INFO     | corecount: 8
[2024-09-28 23:56:11] 2024-09-28 21:42:38,128 | INFO     | event service: False
[2024-09-28 23:56:11] 2024-09-28 21:42:38,128 | INFO     | sizes: {0: 2433986, 1: 2435351, 2: 2435550, 13: 2435550, 24: 2435606, 34: 2435634, 45: 2435790, 56: 2435818, 66: 2435846, 77: 2435874, 88: 2435930, 98: 2436444, 99
[2024-09-28 23:56:11] 2024-09-28 21:42:38,128 | INFO     | --------------------------------------------------
[2024-09-28 23:56:11] 2024-09-28 21:42:38,128 | INFO     | 
[2024-09-28 23:56:11] 2024-09-28 21:42:38,128 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2024-09-28 23:56:11] 2024-09-28 21:42:38,690 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,691 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,691 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,691 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-28 23:56:11] 2024-09-28 21:42:38,692 | INFO     | job 6349540867 has completed (purged errors)
[2024-09-28 23:56:11] 2024-09-28 21:42:38,693 | INFO     | overall cleanup function is called
[2024-09-28 23:56:11] 2024-09-28 21:42:39,703 | INFO     | --- collectZombieJob: --- 10, [26799]
[2024-09-28 23:56:11] 2024-09-28 21:42:39,703 | INFO     | zombie collector waiting for pid 26799
[2024-09-28 23:56:11] 2024-09-28 21:42:39,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-28 23:56:11] 2024-09-28 21:42:39,704 | INFO     | collected zombie processes
[2024-09-28 23:56:11] 2024-09-28 21:42:39,704 | INFO     | will  attempt to kill all subprocesses of pid=26799
[2024-09-28 23:56:11] 2024-09-28 21:42:39,892 | INFO     | process IDs to be killed: [26799] (in reverse order)
[2024-09-28 23:56:11] 2024-09-28 21:42:40,872 | WARNING  | found no corresponding commands to process id(s)
[2024-09-28 23:56:11] 2024-09-28 21:42:40,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-28 23:56:11] 2024-09-28 21:42:40,877 | INFO     | did not find any defunct processes belonging to 26799
[2024-09-28 23:56:11] 2024-09-28 21:42:40,881 | INFO     | did not find any defunct processes belonging to 26799
[2024-09-28 23:56:11] 2024-09-28 21:42:40,882 | INFO     | ready for new job
[2024-09-28 23:56:11] 2024-09-28 21:42:40,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-28 23:56:11] 2024-09-28 21:42:40,885 | INFO     | *************************************
[2024-09-28 23:56:11] 2024-09-28 21:42:40,885 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-09-28 23:56:11] 2024-09-28 21:42:40,885 | INFO     | *************************************
[2024-09-28 23:56:11] 2024-09-28 21:42:40,885 | INFO     | 
[2024-09-28 23:56:11] 2024-09-28 21:42:40,886 | INFO     | pilot is running in a VM
[2024-09-28 23:56:11] 2024-09-28 21:42:40,886 | INFO     | architecture information:
[2024-09-28 23:56:11] 2024-09-28 21:42:40,888 | INFO     | executing command: cat /etc/os-release
[2024-09-28 23:56:11] 2024-09-28 21:42:41,212 | INFO     | cat /etc/os-release:
[2024-09-28 23:56:11] NAME="CentOS Linux"
[2024-09-28 23:56:11] VERSION="7 (Core)"
[2024-09-28 23:56:11] ID="centos"
[2024-09-28 23:56:11] ID_LIKE="rhel fedora"
[2024-09-28 23:56:11] VERSION_ID="7"
[2024-09-28 23:56:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-28 23:56:11] ANSI_COLOR="0;31"
[2024-09-28 23:56:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-28 23:56:11] HOME_URL="https://www.centos.org/"
[2024-09-28 23:56:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-28 23:56:11] 
[2024-09-28 23:56:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-28 23:56:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-28 23:56:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-28 23:56:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-28 23:56:11] 
[2024-09-28 23:56:11] 2024-09-28 21:42:41,213 | INFO     | *************************************
[2024-09-28 23:56:11] 2024-09-28 21:42:41,716 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2024-09-28 23:56:11] 2024-09-28 21:42:41,833 | INFO     | sufficient remaining disk space (487050969088 B)
[2024-09-28 23:56:11] 2024-09-28 21:42:41,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-28 23:56:11] 2024-09-28 21:42:41,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-28 23:56:11] 2024-09-28 21:42:41,835 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-28 23:56:11] 2024-09-28 21:42:41,836 | INFO     | found 0 job(s) in 20 queues
[2024-09-28 23:56:11] 2024-09-28 21:42:41,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-28 23:56:11] 2024-09-28 21:42:41,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-28 23:56:11] 2024-09-28 21:42:41,978 | INFO     | all data control threads have been joined
[2024-09-28 23:56:11] 2024-09-28 21:42:42,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-28 23:56:11] 2024-09-28 21:42:42,037 | INFO     | aborting loop
[2024-09-28 23:56:11] 2024-09-28 21:42:42,346 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-28 23:56:11] 2024-09-28 21:42:42,593 | INFO     | all payload control threads have been joined
[2024-09-28 23:56:11] 2024-09-28 21:42:42,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-28 23:56:11] 2024-09-28 21:42:42,840 | INFO     | [job] retrieve thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:42,862 | INFO     | [payload] failed_post thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:42,984 | INFO     | [data] control thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:43,026 | INFO     | [job] validate thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:43,044 | INFO     | [job] job monitor thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:43,117 | INFO     | [job] create_data_payload thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:43,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-28 23:56:11] 2024-09-28 21:42:43,174 | INFO     | [payload] validate_pre thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:43,474 | INFO     | all job control threads have been joined
[2024-09-28 23:56:11] 2024-09-28 21:42:43,492 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:43,600 | INFO     | [payload] control thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:43,909 | INFO     | [payload] validate_post thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:43,969 | INFO     | [payload] execute_payloads thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:44,015 | INFO     | [data] copytool_in thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:44,152 | INFO     | [job] queue monitor thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:44,354 | INFO     | [data] copytool_out thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:44,480 | INFO     | [job] control thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:46,693 | INFO     | [data] queue_monitor thread has finished
[2024-09-28 23:56:11] 2024-09-28 21:42:47,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478791345984)>', '<ExcThread(monitor, started 140478339065600)>']
[2024-09-28 23:56:11] 2024-09-28 21:42:47,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-28 23:56:11] 2024-09-28 21:42:47,872 | INFO     | [monitor] control thread has ended
[2024-09-28 23:56:11] 2024-09-28 21:42:52,063 | INFO     | all workflow threads have been joined
[2024-09-28 23:56:11] 2024-09-28 21:42:52,063 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-28 23:56:11] 2024-09-28 21:42:52,064 | INFO     | traces error code: 0
[2024-09-28 23:56:11] 2024-09-28 21:42:52,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-28 23:56:11] 2024-09-28 21:42:52,470 [wrapper] ==== pilot stdout END ====
[2024-09-28 23:56:11] 2024-09-28 21:42:52,497 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-28 23:56:11] 2024-09-28 21:42:52,555 [wrapper] pilotpid: 19876
[2024-09-28 23:56:11] 2024-09-28 21:42:52,603 [wrapper] Pilot exit status: 0
[2024-09-28 23:56:11] 2024-09-28 21:42:53,086 [wrapper] pandaids: 6349540867
[2024-09-28 23:56:11] 2024-09-28 21:42:53,818 [wrapper] cleanup supervisor_pilot 23464 19877
[2024-09-28 23:56:11] 2024-09-28 21:42:53,908 [wrapper] Test setup, not cleaning
[2024-09-28 23:56:11] 2024-09-28 21:42:54,023 [wrapper] ==== wrapper stdout END ====
[2024-09-28 23:56:11] 2024-09-28 21:42:54,126 [wrapper] ==== wrapper stderr END ====
[2024-09-28 23:56:11] 2024-09-28 21:42:54,244 [wrapper] apfmon messages muted
[2024-09-28 23:56:11]  *** Error codes and diagnostics ***
[2024-09-28 23:56:11]     "exeErrorCode": 0,
[2024-09-28 23:56:11]     "exeErrorDiag": "",
[2024-09-28 23:56:11]     "pilotErrorCode": 0,
[2024-09-28 23:56:11]     "pilotErrorDiag": "",
[2024-09-28 23:56:11]  *** Listing of results directory ***
[2024-09-28 23:56:11] total 590764
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc    484599 Sep 28 03:48 pilot3.tar.gz
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc      5653 Sep 28 03:59 queuedata.json
[2024-09-28 23:56:11] -rwx------. 1 boinc boinc     33814 Sep 28 03:59 runpilot2-wrapper.sh
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc       100 Sep 28 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-28 23:56:11] -rwxr-xr-x. 1 boinc boinc      7986 Sep 28 19:49 run_atlas
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc       105 Sep 28 19:49 job.xml
[2024-09-28 23:56:11] -rw-r--r--. 2 boinc boinc 439468790 Sep 28 19:49 EVNT.41081611._000018.pool.root.1
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc      6347 Sep 28 19:49 init_data.xml
[2024-09-28 23:56:11] drwxrwx--x. 2 boinc boinc        68 Sep 28 19:49 shared
[2024-09-28 23:56:11] -rw-r--r--. 2 boinc boinc    498186 Sep 28 19:49 input.tar.gz
[2024-09-28 23:56:11] -rw-r--r--. 2 boinc boinc     17537 Sep 28 19:49 start_atlas.sh
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc         0 Sep 28 19:49 boinc_lockfile
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc      2578 Sep 28 19:49 pandaJob.out
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc       424 Sep 28 19:50 setup.sh.local
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc   1012096 Sep 28 19:53 agis_schedconf.cvmfs.json
[2024-09-28 23:56:11] drwx------. 4 boinc boinc      4096 Sep 28 19:53 pilot3
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc 158520804 Sep 28 23:39 HITS.41081613._000468.pool.root.1
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc       532 Sep 28 23:39 boinc_task_state.xml
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc      1016 Sep 28 23:40 memory_monitor_summary.json
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc   1615815 Sep 28 23:40 agis_ddmendpoints.agis.ALL.json
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc    372604 Sep 28 23:41 log.41081613._000468.job.log.tgz.1
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc        95 Sep 28 23:41 pilot_heartbeat.json
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc      7691 Sep 28 23:42 heartbeat.json
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc      4397 Sep 28 23:42 pilotlog.txt
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc   1182445 Sep 28 23:42 log.41081613._000468.job.log.1
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc       357 Sep 28 23:42 output.list
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc       620 Sep 28 23:42 runtime_log
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc   1576960 Sep 28 23:42 result.tar.gz
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc     10999 Sep 28 23:42 runtime_log.err
[2024-09-28 23:56:11] -rw-------. 1 boinc boinc       645 Sep 28 23:42 3OQMDmavbE6n9Rq4apOajLDm4fhM0noT9bVorHsSDmG9ZKDmbqCvQo.diag
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc      8192 Sep 28 23:56 boinc_mmap_file
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc        28 Sep 28 23:56 wrapper_checkpoint.txt
[2024-09-28 23:56:11] -rw-r--r--. 1 boinc boinc     21596 Sep 28 23:56 stderr.txt
[2024-09-28 23:56:12] HITS file was successfully produced:
[2024-09-28 23:56:12] -rw-------. 1 boinc boinc 158520804 Sep 28 23:39 shared/HITS.pool.root.1
[2024-09-28 23:56:12]  *** Contents of shared directory: ***
[2024-09-28 23:56:12] total 586028
[2024-09-28 23:56:12] -rw-r--r--. 2 boinc boinc 439468790 Sep 28 19:49 ATLAS.root_0
[2024-09-28 23:56:12] -rw-r--r--. 2 boinc boinc    498186 Sep 28 19:49 input.tar.gz
[2024-09-28 23:56:12] -rw-r--r--. 2 boinc boinc     17537 Sep 28 19:49 start_atlas.sh
[2024-09-28 23:56:12] -rw-------. 1 boinc boinc 158520804 Sep 28 23:39 HITS.pool.root.1
[2024-09-28 23:56:12] -rw-------. 1 boinc boinc   1576960 Sep 28 23:42 result.tar.gz
23:56:13 (14566): run_atlas exited; CPU time 45277.510233
23:56:13 (14566): called boinc_finish(0)

</stderr_txt>
]]>

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