Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:41:43 (27444): wrapper (7.7.26015): starting
09:41:43 (27444): wrapper: running run_atlas (--nthreads 8)
[2024-09-26 09:41:43] Arguments: --nthreads 8
[2024-09-26 09:41:43] Threads: 8
[2024-09-26 09:41:43] Checking for CVMFS
[2024-09-26 09:41:44] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-26 09:41:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-26 09:41:44] Running cvmfs_config stat atlas.cern.ch
[2024-09-26 09:41:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-26 09:41:45] 2.11.2.0 30018 43950 63360 137668 0 60 13621435 25165825 4213 130560 0 35700973 99.917 18300096 5674 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-09-26 09:41:45] CVMFS is ok
[2024-09-26 09:41:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-26 09:41:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-26 09:41:45] Further information can be found at the LHC@home message board.
[2024-09-26 09:41:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-26 09:41:45] Checking for apptainer binary...
[2024-09-26 09:41:45] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-26 09:41:45] Running /usr/bin/apptainer --version
[2024-09-26 09:41:46] apptainer version 1.3.2-1.el7
[2024-09-26 09:41:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-26 09:48:00] cg-vwn215.simple-grid.lan
[2024-09-26 09:48:00] apptainer works
[2024-09-26 09:48:00] Set ATHENA_PROC_NUMBER=8
[2024-09-26 09:48:00] Set ATHENA_CORE_NUMBER=8
[2024-09-26 09:48:00] Starting ATLAS job with PandaID=6346091303
[2024-09-26 09:48:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-26 14:19:36]  *** The last 200 lines of the pilot log: ***
[2024-09-26 14:19:36] 2024-09-26 12:04:16,933 | INFO     | chi2: 9.400865261651601
[2024-09-26 14:19:36] 2024-09-26 12:04:16,933 | INFO     | current chi2=9.400865261651601 (change=6.904960827302655 %)
[2024-09-26 14:19:36] 2024-09-26 12:04:16,933 | INFO     | right removable region: 234
[2024-09-26 14:19:36] 2024-09-26 12:04:16,933 | INFO     | model: linear, x: [1727337885.0, 1727337946.0, 1727338007.0, 1727338068.0, 1727338129.0, 1727338190.0, 1727338251.0, 1727338312.0, 1727338373.0, 1727338434.0, 1727
[2024-09-26 14:19:36] 2024-09-26 12:04:16,934 | INFO     | sum of square deviations: 4024119009.8467984
[2024-09-26 14:19:36] 2024-09-26 12:04:16,935 | INFO     | sum of deviations: 122073333079.44669
[2024-09-26 14:19:36] 2024-09-26 12:04:16,936 | INFO     | mean x: 1727345022.025532
[2024-09-26 14:19:36] 2024-09-26 12:04:16,944 | INFO     | mean y: 2681773.425531915
[2024-09-26 14:19:36] 2024-09-26 12:04:16,944 | INFO     | -- intersect: -52397051857.93014
[2024-09-26 14:19:36] 2024-09-26 12:04:16,944 | INFO     | intersect: -52397051857.93014
[2024-09-26 14:19:36] 2024-09-26 12:04:16,945 | INFO     | chi2: 5.2720513437748195
[2024-09-26 14:19:36] 2024-09-26 12:04:16,954 | INFO     | current chi2=5.2720513437748195 (change=47.79184546221637 %)
[2024-09-26 14:19:36] 2024-09-26 12:04:16,955 | INFO     | model: linear, x: [1727338190.0, 1727338251.0, 1727338312.0, 1727338373.0, 1727338434.0, 1727338495.0, 1727338556.0, 1727338617.0, 1727338678.0, 1727338739.0, 1727
[2024-09-26 14:19:36] 2024-09-26 12:04:16,955 | INFO     | sum of square deviations: 3772679907.3434744
[2024-09-26 14:19:36] 2024-09-26 12:04:16,957 | INFO     | sum of deviations: 59102033163.34783
[2024-09-26 14:19:36] 2024-09-26 12:04:16,958 | INFO     | mean x: 1727345174.526087
[2024-09-26 14:19:36] 2024-09-26 12:04:16,958 | INFO     | mean y: 2719929.6086956523
[2024-09-26 14:19:36] 2024-09-26 12:04:16,958 | INFO     | -- intersect: -27057516903.80871
[2024-09-26 14:19:36] 2024-09-26 12:04:16,958 | INFO     | intersect: -27057516903.80871
[2024-09-26 14:19:36] 2024-09-26 12:04:16,959 | INFO     | chi2: 2.9882058577958803
[2024-09-26 14:19:36] 2024-09-26 12:04:16,959 | INFO     | current chi2=2.9882058577958803 (change=43.31986426262102 %)
[2024-09-26 14:19:36] 2024-09-26 12:04:16,959 | INFO     | model: linear, x: [1727338495.0, 1727338556.0, 1727338617.0, 1727338678.0, 1727338739.0, 1727338800.0, 1727338861.0, 1727338922.0, 1727338983.0, 1727339044.0, 1727
[2024-09-26 14:19:36] 2024-09-26 12:04:16,960 | INFO     | sum of square deviations: 3531938679.840007
[2024-09-26 14:19:36] 2024-09-26 12:04:16,961 | INFO     | sum of deviations: 7969951668.733358
[2024-09-26 14:19:36] 2024-09-26 12:04:16,962 | INFO     | mean x: 1727345327.0266666
[2024-09-26 14:19:36] 2024-09-26 12:04:16,962 | INFO     | mean y: 2752322.3777777776
[2024-09-26 14:19:36] 2024-09-26 12:04:16,962 | INFO     | -- intersect: -3895066982.978502
[2024-09-26 14:19:36] 2024-09-26 12:04:16,962 | INFO     | intersect: -3895066982.978502
[2024-09-26 14:19:36] 2024-09-26 12:04:16,963 | INFO     | chi2: 1.5097627477804194
[2024-09-26 14:19:36] 2024-09-26 12:04:16,963 | INFO     | current chi2=1.5097627477804194 (change=49.47594578058855 %)
[2024-09-26 14:19:36] 2024-09-26 12:04:16,963 | INFO     | model: linear, x: [1727338800.0, 1727338861.0, 1727338922.0, 1727338983.0, 1727339044.0, 1727339105.0, 1727339166.0, 1727339227.0, 1727339288.0, 1727339349.0, 1727
[2024-09-26 14:19:36] 2024-09-26 12:04:16,963 | INFO     | sum of square deviations: 3301662764.8363748
[2024-09-26 14:19:36] 2024-09-26 12:04:16,965 | INFO     | sum of deviations: -23927710518.96364
[2024-09-26 14:19:36] 2024-09-26 12:04:16,965 | INFO     | mean x: 1727345479.5272727
[2024-09-26 14:19:36] 2024-09-26 12:04:16,965 | INFO     | mean y: 2773330.577272727
[2024-09-26 14:19:36] 2024-09-26 12:04:16,965 | INFO     | -- intersect: 12521139240.191101
[2024-09-26 14:19:36] 2024-09-26 12:04:16,965 | INFO     | intersect: 12521139240.191101
[2024-09-26 14:19:36] 2024-09-26 12:04:16,966 | INFO     | chi2: 0.8013030994781205
[2024-09-26 14:19:36] 2024-09-26 12:04:16,966 | INFO     | current chi2=0.8013030994781205 (change=46.92523042735306 %)
[2024-09-26 14:19:36] 2024-09-26 12:04:16,966 | INFO     | model: linear, x: [1727339105.0, 1727339166.0, 1727339227.0, 1727339288.0, 1727339349.0, 1727339410.0, 1727339471.0, 1727339532.0, 1727339593.0, 1727339654.0, 1727
[2024-09-26 14:19:36] 2024-09-26 12:04:16,967 | INFO     | sum of square deviations: 3081619599.8325596
[2024-09-26 14:19:36] 2024-09-26 12:04:16,969 | INFO     | sum of deviations: -29674262514.958138
[2024-09-26 14:19:36] 2024-09-26 12:04:16,970 | INFO     | mean x: 1727345632.027907
[2024-09-26 14:19:36] 2024-09-26 12:04:16,970 | INFO     | mean y: 2777274.493023256
[2024-09-26 14:19:36] 2024-09-26 12:04:16,970 | INFO     | -- intersect: 16636143619.140976
[2024-09-26 14:19:36] 2024-09-26 12:04:16,970 | INFO     | intersect: 16636143619.140976
[2024-09-26 14:19:36] 2024-09-26 12:04:16,970 | INFO     | chi2: 0.7602632382039056
[2024-09-26 14:19:36] 2024-09-26 12:04:16,970 | INFO     | current chi2=0.7602632382039056 (change=5.121640151016972 %)
[2024-09-26 14:19:36] 2024-09-26 12:04:16,970 | INFO     | left removable region: 50
[2024-09-26 14:19:36] 2024-09-26 12:04:16,971 | INFO     | model: linear, x: [1727340630.0, 1727340691.0, 1727340752.0, 1727340813.0, 1727340874.0, 1727340935.0, 1727340996.0, 1727341057.0, 1727341118.0, 1727341179.0, 1727
[2024-09-26 14:19:36] 2024-09-26 12:04:16,971 | INFO     | sum of square deviations: 1931574459.8641236
[2024-09-26 14:19:36] 2024-09-26 12:04:16,972 | INFO     | sum of deviations: -13643960766.054344
[2024-09-26 14:19:36] 2024-09-26 12:04:16,972 | INFO     | mean x: 1727346211.527174
[2024-09-26 14:19:36] 2024-09-26 12:04:16,972 | INFO     | mean y: 2789534.0108695654
[2024-09-26 14:19:36] 2024-09-26 12:04:16,972 | INFO     | -- intersect: 12204153980.053116
[2024-09-26 14:19:36] 2024-09-26 12:04:16,973 | INFO     | intersect: 12204153980.053116
[2024-09-26 14:19:36] 2024-09-26 12:04:16,973 | INFO     | chi2: 0.006033587706337384
[2024-09-26 14:19:36] 2024-09-26 12:04:16,973 | INFO     | -- intersect: 12204153980.053116
[2024-09-26 14:19:36] 2024-09-26 12:04:16,973 | INFO     | current memory leak: -7.06 B/s (using 184 data points, chi2=0.01)
[2024-09-26 14:19:36] 2024-09-26 12:04:16,974 | INFO     | ..............................
[2024-09-26 14:19:36] 2024-09-26 12:04:16,974 | INFO     | . Timing measurements:
[2024-09-26 14:19:36] 2024-09-26 12:04:16,975 | INFO     | . get job = 0 s
[2024-09-26 14:19:36] 2024-09-26 12:04:16,975 | INFO     | . initial setup = 8 s
[2024-09-26 14:19:36] 2024-09-26 12:04:16,975 | INFO     | . payload setup = 116 s
[2024-09-26 14:19:36] 2024-09-26 12:04:16,975 | INFO     | . stage-in = 0 s
[2024-09-26 14:19:36] 2024-09-26 12:04:16,975 | INFO     | . payload execution = 14748 s
[2024-09-26 14:19:36] 2024-09-26 12:04:16,975 | INFO     | . stage-out = 4 s
[2024-09-26 14:19:36] 2024-09-26 12:04:16,975 | INFO     | . log creation = 2 s
[2024-09-26 14:19:36] 2024-09-26 12:04:16,975 | INFO     | ..............................
[2024-09-26 14:19:36] 2024-09-26 12:04:17,360 | INFO     | 
[2024-09-26 14:19:36] 2024-09-26 12:04:17,361 | INFO     | job summary report
[2024-09-26 14:19:36] 2024-09-26 12:04:17,361 | INFO     | --------------------------------------------------
[2024-09-26 14:19:36] 2024-09-26 12:04:17,361 | INFO     | PanDA job id: 6346091303
[2024-09-26 14:19:36] 2024-09-26 12:04:17,361 | INFO     | task id: 41398294
[2024-09-26 14:19:36] 2024-09-26 12:04:17,361 | INFO     | errors: (none)
[2024-09-26 14:19:36] 2024-09-26 12:04:17,361 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-26 14:19:36] 2024-09-26 12:04:17,361 | INFO     | pilot state: finished 
[2024-09-26 14:19:36] 2024-09-26 12:04:17,361 | INFO     | transexitcode: 0
[2024-09-26 14:19:36] 2024-09-26 12:04:17,361 | INFO     | exeerrorcode: 0
[2024-09-26 14:19:36] 2024-09-26 12:04:17,362 | INFO     | exeerrordiag: 
[2024-09-26 14:19:36] 2024-09-26 12:04:17,362 | INFO     | exitcode: 0
[2024-09-26 14:19:36] 2024-09-26 12:04:17,362 | INFO     | exitmsg: OK
[2024-09-26 14:19:36] 2024-09-26 12:04:17,362 | INFO     | cpuconsumptiontime: 43780 s
[2024-09-26 14:19:36] 2024-09-26 12:04:17,362 | INFO     | nevents: 400
[2024-09-26 14:19:36] 2024-09-26 12:04:17,362 | INFO     | neventsw: 0
[2024-09-26 14:19:36] 2024-09-26 12:04:17,362 | INFO     | pid: 16693
[2024-09-26 14:19:36] 2024-09-26 12:04:17,362 | INFO     | pgrp: 16693
[2024-09-26 14:19:36] 2024-09-26 12:04:17,362 | INFO     | corecount: 8
[2024-09-26 14:19:36] 2024-09-26 12:04:17,363 | INFO     | event service: False
[2024-09-26 14:19:36] 2024-09-26 12:04:17,363 | INFO     | sizes: {0: 2438721, 1: 2440086, 2: 2440285, 3: 2440285, 13: 2440313, 24: 2440369, 35: 2440525, 46: 2440553, 56: 2440581, 67: 2440609, 78: 2440637, 89: 2440973, 90:
[2024-09-26 14:19:36] 2024-09-26 12:04:17,363 | INFO     | --------------------------------------------------
[2024-09-26 14:19:36] 2024-09-26 12:04:17,363 | INFO     | 
[2024-09-26 14:19:36] 2024-09-26 12:04:17,363 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-09-26 14:19:36] 2024-09-26 12:04:17,938 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,939 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,939 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,939 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,941 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-26 14:19:36] 2024-09-26 12:04:17,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,941 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-26 14:19:36] 2024-09-26 12:04:17,941 | INFO     | job 6346091303 has completed (purged errors)
[2024-09-26 14:19:36] 2024-09-26 12:04:17,941 | INFO     | overall cleanup function is called
[2024-09-26 14:19:36] 2024-09-26 12:04:18,958 | INFO     | --- collectZombieJob: --- 10, [16693]
[2024-09-26 14:19:36] 2024-09-26 12:04:18,959 | INFO     | zombie collector waiting for pid 16693
[2024-09-26 14:19:36] 2024-09-26 12:04:18,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-26 14:19:36] 2024-09-26 12:04:18,959 | INFO     | collected zombie processes
[2024-09-26 14:19:36] 2024-09-26 12:04:18,959 | INFO     | will  attempt to kill all subprocesses of pid=16693
[2024-09-26 14:19:36] 2024-09-26 12:04:19,660 | INFO     | process IDs to be killed: [16693] (in reverse order)
[2024-09-26 14:19:36] 2024-09-26 12:04:20,556 | WARNING  | found no corresponding commands to process id(s)
[2024-09-26 14:19:36] 2024-09-26 12:04:20,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-26 14:19:36] 2024-09-26 12:04:20,562 | INFO     | did not find any defunct processes belonging to 16693
[2024-09-26 14:19:36] 2024-09-26 12:04:20,578 | INFO     | did not find any defunct processes belonging to 16693
[2024-09-26 14:19:36] 2024-09-26 12:04:20,579 | INFO     | ready for new job
[2024-09-26 14:19:36] 2024-09-26 12:04:20,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-26 14:19:36] 2024-09-26 12:04:20,582 | INFO     | **************************************
[2024-09-26 14:19:36] 2024-09-26 12:04:20,583 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-26 14:19:36] 2024-09-26 12:04:20,583 | INFO     | **************************************
[2024-09-26 14:19:36] 2024-09-26 12:04:20,583 | INFO     | 
[2024-09-26 14:19:36] 2024-09-26 12:04:20,584 | INFO     | pilot is running in a VM
[2024-09-26 14:19:36] 2024-09-26 12:04:20,584 | INFO     | architecture information:
[2024-09-26 14:19:36] 2024-09-26 12:04:20,594 | INFO     | executing command: cat /etc/os-release
[2024-09-26 14:19:36] 2024-09-26 12:04:20,862 | INFO     | cat /etc/os-release:
[2024-09-26 14:19:36] NAME="CentOS Linux"
[2024-09-26 14:19:36] VERSION="7 (Core)"
[2024-09-26 14:19:36] ID="centos"
[2024-09-26 14:19:36] ID_LIKE="rhel fedora"
[2024-09-26 14:19:36] VERSION_ID="7"
[2024-09-26 14:19:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-26 14:19:36] ANSI_COLOR="0;31"
[2024-09-26 14:19:36] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-26 14:19:36] HOME_URL="https://www.centos.org/"
[2024-09-26 14:19:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-26 14:19:36] 
[2024-09-26 14:19:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-26 14:19:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-26 14:19:36] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-26 14:19:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-26 14:19:36] 
[2024-09-26 14:19:36] 2024-09-26 12:04:20,862 | INFO     | **************************************
[2024-09-26 14:19:36] 2024-09-26 12:04:21,366 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-09-26 14:19:36] 2024-09-26 12:04:21,653 | INFO     | sufficient remaining disk space (459063427072 B)
[2024-09-26 14:19:36] 2024-09-26 12:04:21,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-26 14:19:36] 2024-09-26 12:04:21,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-26 14:19:36] 2024-09-26 12:04:21,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-26 14:19:36] 2024-09-26 12:04:21,656 | INFO     | aborting loop
[2024-09-26 14:19:36] 2024-09-26 12:04:21,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-26 14:19:36] 2024-09-26 12:04:22,019 | INFO     | found 0 job(s) in 20 queues
[2024-09-26 14:19:36] 2024-09-26 12:04:22,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-26 14:19:36] 2024-09-26 12:04:22,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-26 14:19:36] 2024-09-26 12:04:22,026 | INFO     | all payload control threads have been joined
[2024-09-26 14:19:36] 2024-09-26 12:04:22,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-26 14:19:36] 2024-09-26 12:04:22,468 | INFO     | all job control threads have been joined
[2024-09-26 14:19:36] 2024-09-26 12:04:22,616 | INFO     | all data control threads have been joined
[2024-09-26 14:19:36] 2024-09-26 12:04:22,660 | INFO     | [job] retrieve thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:22,664 | INFO     | [job] job monitor thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:22,700 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,032 | INFO     | [payload] control thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,033 | INFO     | [job] validate thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,182 | INFO     | [job] queue monitor thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-26 14:19:36] 2024-09-26 12:04:23,413 | INFO     | [payload] validate_pre thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,474 | INFO     | [job] control thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,516 | INFO     | [job] create_data_payload thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,520 | INFO     | [data] copytool_in thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,622 | INFO     | [data] control thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,668 | INFO     | [data] copytool_out thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,678 | INFO     | [payload] execute_payloads thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,921 | INFO     | [payload] validate_post thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:23,991 | INFO     | [payload] failed_post thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:27,415 | INFO     | [data] queue_monitor thread has finished
[2024-09-26 14:19:36] 2024-09-26 12:04:27,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140450475693888)>', '<ExcThread(monitor, started 140450019124992)>']
[2024-09-26 14:19:36] 2024-09-26 12:04:28,055 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-26 14:19:36] 2024-09-26 12:04:28,056 | INFO     | [monitor] control thread has ended
[2024-09-26 14:19:36] 2024-09-26 12:04:32,743 | INFO     | all workflow threads have been joined
[2024-09-26 14:19:36] 2024-09-26 12:04:32,743 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-26 14:19:36] 2024-09-26 12:04:32,744 | INFO     | traces error code: 0
[2024-09-26 14:19:36] 2024-09-26 12:04:32,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-26 14:19:36] 2024-09-26 12:04:33,206 [wrapper] ==== pilot stdout END ====
[2024-09-26 14:19:36] 2024-09-26 12:04:33,273 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-26 14:19:36] 2024-09-26 12:04:33,369 [wrapper] pilotpid: 5845
[2024-09-26 14:19:36] 2024-09-26 12:04:33,468 [wrapper] Pilot exit status: 0
[2024-09-26 14:19:36] 2024-09-26 12:04:33,924 [wrapper] pandaids: 6346091303
[2024-09-26 14:19:36] 2024-09-26 12:04:34,679 [wrapper] cleanup supervisor_pilot 16955 5846
[2024-09-26 14:19:36] 2024-09-26 12:04:34,774 [wrapper] Test setup, not cleaning
[2024-09-26 14:19:36] 2024-09-26 12:04:34,870 [wrapper] ==== wrapper stdout END ====
[2024-09-26 14:19:36] 2024-09-26 12:04:34,965 [wrapper] ==== wrapper stderr END ====
[2024-09-26 14:19:36] 2024-09-26 12:04:35,138 [wrapper] apfmon messages muted
[2024-09-26 14:19:36]  *** Error codes and diagnostics ***
[2024-09-26 14:19:36]     "exeErrorCode": 0,
[2024-09-26 14:19:36]     "exeErrorDiag": "",
[2024-09-26 14:19:36]     "pilotErrorCode": 0,
[2024-09-26 14:19:36]     "pilotErrorDiag": "",
[2024-09-26 14:19:36]  *** Listing of results directory ***
[2024-09-26 14:19:36] total 592364
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc    482533 Sep 25 18:09 pilot3.tar.gz
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc      5655 Sep 25 18:14 queuedata.json
[2024-09-26 14:19:36] -rwx------. 1 boinc boinc     33814 Sep 25 18:14 runpilot2-wrapper.sh
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc       100 Sep 26 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-26 14:19:36] -rwxr-xr-x. 1 boinc boinc      7986 Sep 26 09:41 run_atlas
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc       105 Sep 26 09:41 job.xml
[2024-09-26 14:19:36] -rw-r--r--. 2 boinc boinc 443207382 Sep 26 09:41 EVNT.41398292._000002.pool.root.1
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc      6347 Sep 26 09:41 init_data.xml
[2024-09-26 14:19:36] -rw-r--r--. 2 boinc boinc     17539 Sep 26 09:41 start_atlas.sh
[2024-09-26 14:19:36] drwxrwx--x. 2 boinc boinc        68 Sep 26 09:41 shared
[2024-09-26 14:19:36] -rw-r--r--. 2 boinc boinc    495983 Sep 26 09:41 input.tar.gz
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc         0 Sep 26 09:41 boinc_lockfile
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc      2573 Sep 26 09:48 pandaJob.out
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc       424 Sep 26 09:48 setup.sh.local
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc   1016020 Sep 26 09:51 agis_schedconf.cvmfs.json
[2024-09-26 14:19:36] drwx------. 4 boinc boinc      4096 Sep 26 09:51 pilot3
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc 156121909 Sep 26 14:01 HITS.41398294._000033.pool.root.1
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc       532 Sep 26 14:01 boinc_task_state.xml
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc      1025 Sep 26 14:02 memory_monitor_summary.json
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc   1618603 Sep 26 14:02 agis_ddmendpoints.agis.ALL.json
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc    386219 Sep 26 14:02 log.41398294._000033.job.log.tgz.1
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc        95 Sep 26 14:03 pilot_heartbeat.json
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc      7698 Sep 26 14:04 heartbeat.json
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc      4278 Sep 26 14:04 pilotlog.txt
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc   1314904 Sep 26 14:04 log.41398294._000033.job.log.1
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc       357 Sep 26 14:04 output.list
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc       620 Sep 26 14:04 runtime_log
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc   1720320 Sep 26 14:04 result.tar.gz
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc     11000 Sep 26 14:04 runtime_log.err
[2024-09-26 14:19:36] -rw-------. 1 boinc boinc       644 Sep 26 14:04 HD3NDmHqjD6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmmhiKDmpnwFUm.diag
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc      8192 Sep 26 14:19 boinc_mmap_file
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc        28 Sep 26 14:19 wrapper_checkpoint.txt
[2024-09-26 14:19:36] -rw-r--r--. 1 boinc boinc     21629 Sep 26 14:19 stderr.txt
[2024-09-26 14:19:37] HITS file was successfully produced:
[2024-09-26 14:19:37] -rw-------. 1 boinc boinc 156121909 Sep 26 14:01 shared/HITS.pool.root.1
[2024-09-26 14:19:37]  *** Contents of shared directory: ***
[2024-09-26 14:19:37] total 587472
[2024-09-26 14:19:37] -rw-r--r--. 2 boinc boinc 443207382 Sep 26 09:41 ATLAS.root_0
[2024-09-26 14:19:37] -rw-r--r--. 2 boinc boinc     17539 Sep 26 09:41 start_atlas.sh
[2024-09-26 14:19:37] -rw-r--r--. 2 boinc boinc    495983 Sep 26 09:41 input.tar.gz
[2024-09-26 14:19:37] -rw-------. 1 boinc boinc 156121909 Sep 26 14:01 HITS.pool.root.1
[2024-09-26 14:19:37] -rw-------. 1 boinc boinc   1720320 Sep 26 14:04 result.tar.gz
14:19:38 (27444): run_atlas exited; CPU time 43659.834384
14:19:38 (27444): called boinc_finish(0)

</stderr_txt>
]]>

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