Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:34:44 (1778685): wrapper (7.7.26015): starting
11:34:44 (1778685): wrapper: running run_atlas (--nthreads 8)
[2024-09-23 11:34:44] Arguments: --nthreads 8
[2024-09-23 11:34:44] Threads: 8
[2024-09-23 11:34:44] Checking for CVMFS
[2024-09-23 11:34:46] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-23 11:34:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-23 11:34:46] Running cvmfs_config stat atlas.cern.ch
[2024-09-23 11:34:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-23 11:34:50] 2.11.2.0 2197843 147959 95872 137566 2 56 12674404 18432001 3661 130560 5 459138678 99.988 28896867 24765 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-09-23 11:34:50] CVMFS is ok
[2024-09-23 11:34:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-23 11:34:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-23 11:34:50] Further information can be found at the LHC@home message board.
[2024-09-23 11:34:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-23 11:34:50] Checking for apptainer binary...
[2024-09-23 11:34:50] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-23 11:34:50] Running /usr/bin/apptainer --version
[2024-09-23 11:34:50] apptainer version 1.2.4-1.el7
[2024-09-23 11:34:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-23 11:34:52] gc-9-36.aglt2.org
[2024-09-23 11:34:52] apptainer works
[2024-09-23 11:34:52] Set ATHENA_PROC_NUMBER=8
[2024-09-23 11:34:52] Set ATHENA_CORE_NUMBER=8
[2024-09-23 11:34:52] Starting ATLAS job with PandaID=6342860148
[2024-09-23 11:34:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-23 12:57:26]  *** The last 200 lines of the pilot log: ***
[2024-09-23 12:57:26]  guid=a1f027e9-607f-43d7-9b3a-a4246f66e9c3
[2024-09-23 12:57:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-23 12:57:26]  is_tar=False
[2024-09-23 12:57:26]  lfn=log.41078631._029301.job.log.tgz.1
[2024-09-23 12:57:26]  mtime=0
[2024-09-23 12:57:26]  protocol_id=None
[2024-09-23 12:57:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-23 12:57:26]  replicas=None
[2024-09-23 12:57:26]  scope=mc23_13p6TeV
[2024-09-23 12:57:26]  status=None
[2024-09-23 12:57:26]  status_code=0
[2024-09-23 12:57:26]  storage_token=
[2024-09-23 12:57:26]  surl=/data/boinchome/slots/5/PanDA_Pilot-6342860148/log.41078631._029301.job.log.tgz.1
[2024-09-23 12:57:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/99/log.41078631._029301.job.log.tgz.1
[2024-09-23 12:57:26]  workdir=None
[2024-09-23 12:57:26] ]
[2024-09-23 12:57:26] 2024-09-23 16:57:06,223 | INFO     | monitor loop #385: job 0:6342860148 is in state 'stageout'
[2024-09-23 12:57:26] 2024-09-23 16:57:06,230 | WARNING  | aborting job monitor tasks since payload process 1816300 is not running
[2024-09-23 12:57:26] 2024-09-23 16:57:06,230 | INFO     | transferring file log.41078631._029301.job.log.tgz.1 from /data/boinchome/slots/5/PanDA_Pilot-6342860148/log.41078631._029301.job.log.tgz.1 to /data/boinchome/slot
[2024-09-23 12:57:26] 2024-09-23 16:57:06,230 | INFO     | executing command: /usr/bin/env mv /data/boinchome/slots/5/PanDA_Pilot-6342860148/log.41078631._029301.job.log.tgz.1 /data/boinchome/slots/5/log.41078631._029301.j
[2024-09-23 12:57:26] 2024-09-23 16:57:06,247 | INFO     | adding to output.list: log.41078631._029301.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/99/log.41078631._029301.job.log.tg
[2024-09-23 12:57:26] 2024-09-23 16:57:06,248 | INFO     | summary of transferred files:
[2024-09-23 12:57:26] 2024-09-23 16:57:06,248 | INFO     |  -- lfn=log.41078631._029301.job.log.tgz.1, status_code=0, status=transferred
[2024-09-23 12:57:26] 2024-09-23 16:57:06,248 | INFO     | stage-out finished correctly
[2024-09-23 12:57:26] 2024-09-23 16:57:06,291 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-23 12:57:26] 2024-09-23 16:57:08,733 | INFO     | monitor loop #386: job 0:6342860148 is in state 'finished'
[2024-09-23 12:57:26] 2024-09-23 16:57:08,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-23 12:57:26] 2024-09-23 16:57:08,806 | INFO     | job 6342860148 has state=finished
[2024-09-23 12:57:26] 2024-09-23 16:57:08,806 | INFO     | preparing for final server update for job 6342860148 in state='finished'
[2024-09-23 12:57:26] 2024-09-23 16:57:08,807 | INFO     | this job has now completed (state=finished)
[2024-09-23 12:57:26] 2024-09-23 16:57:08,807 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-23 12:57:26] 2024-09-23 16:57:08,807 | INFO     | log transfer has been attempted: DONE
[2024-09-23 12:57:26] 2024-09-23 16:57:08,807 | INFO     | job 6342860148 has finished - writing final server update
[2024-09-23 12:57:26] 2024-09-23 16:57:08,808 | INFO     | total number of processed events: 400 (read)
[2024-09-23 12:57:26] 2024-09-23 16:57:08,813 | INFO     | executing command: lscpu
[2024-09-23 12:57:26] 2024-09-23 16:57:08,867 | INFO     | found 24 cores (12 cores per socket, 2 sockets)
[2024-09-23 12:57:26] 2024-09-23 16:57:08,868 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-23 12:57:26] 2024-09-23 16:57:08,920 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-23 12:57:26] 2024-09-23 16:57:11,236 | INFO     | monitor loop #387: job 0:6342860148 is in state 'finished'
[2024-09-23 12:57:26] 2024-09-23 16:57:11,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-23 12:57:26] 2024-09-23 16:57:11,633 | INFO     | CPU arch script returned: x86-64-v4
[2024-09-23 12:57:26] 2024-09-23 16:57:11,633 | INFO     | using path: /data/boinchome/slots/5/PanDA_Pilot-6342860148/memory_monitor_summary.json (trf name=prmon)
[2024-09-23 12:57:26] 2024-09-23 16:57:11,634 | INFO     | extracted standard info from prmon json
[2024-09-23 12:57:26] 2024-09-23 16:57:11,634 | INFO     | extracted standard memory fields from prmon json
[2024-09-23 12:57:26] 2024-09-23 16:57:11,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-23 12:57:26] 2024-09-23 16:57:11,634 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-23 12:57:26] 2024-09-23 16:57:11,634 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-23 12:57:26] 2024-09-23 16:57:11,635 | INFO     | fitting pss+swap vs Time
[2024-09-23 12:57:26] 2024-09-23 16:57:11,635 | INFO     | model: linear, x: [1727106271.0, 1727106332.0, 1727106393.0, 1727106454.0, 1727106515.0, 1727106576.0, 1727106637.0, 1727106698.0, 1727106759.0, 1727106820.0, 1727
[2024-09-23 12:57:26] 2024-09-23 16:57:11,635 | INFO     | sum of square deviations: 106336877.5
[2024-09-23 12:57:26] 2024-09-23 16:57:11,635 | INFO     | sum of deviations: 28048012341.0
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | mean x: 1727108375.5
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | mean y: 2300416.0285714287
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | -- intersect: -455549509728.74896
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | intersect: -455549509728.74896
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | chi2: 2.813591045176709
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | -- intersect: -455549509728.74896
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | current memory leak: 263.77 B/s (using 70 data points, chi2=2.81)
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | ..............................
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | . Timing measurements:
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | . get job = 0 s
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | . initial setup = 7 s
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | . payload setup = 59 s
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | . stage-in = 0 s
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | . payload execution = 4692 s
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | . stage-out = 0 s
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | . log creation = 0 s
[2024-09-23 12:57:26] 2024-09-23 16:57:11,636 | INFO     | ..............................
[2024-09-23 12:57:26] 2024-09-23 16:57:11,677 | INFO     | 
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | job summary report
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | --------------------------------------------------
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | PanDA job id: 6342860148
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | task id: 41078631
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | errors: (none)
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | pilot state: finished 
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | transexitcode: 0
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | exeerrorcode: 0
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | exeerrordiag: 
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | exitcode: 0
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | exitmsg: OK
[2024-09-23 12:57:26] 2024-09-23 16:57:11,678 | INFO     | cpuconsumptiontime: 20551 s
[2024-09-23 12:57:26] 2024-09-23 16:57:11,679 | INFO     | nevents: 400
[2024-09-23 12:57:26] 2024-09-23 16:57:11,679 | INFO     | neventsw: 0
[2024-09-23 12:57:26] 2024-09-23 16:57:11,679 | INFO     | pid: 1816300
[2024-09-23 12:57:26] 2024-09-23 16:57:11,679 | INFO     | pgrp: 1816300
[2024-09-23 12:57:26] 2024-09-23 16:57:11,679 | INFO     | corecount: 8
[2024-09-23 12:57:26] 2024-09-23 16:57:11,679 | INFO     | event service: False
[2024-09-23 12:57:26] 2024-09-23 16:57:11,679 | INFO     | sizes: {0: 2438697, 1: 2440063, 2: 2440262, 13: 2440262, 23: 2440318, 34: 2440346, 42: 2440708, 45: 2440736, 4755: 2466694, 4756: 2475712, 4761: 2475826}
[2024-09-23 12:57:26] 2024-09-23 16:57:11,679 | INFO     | --------------------------------------------------
[2024-09-23 12:57:26] 2024-09-23 16:57:11,679 | INFO     | 
[2024-09-23 12:57:26] 2024-09-23 16:57:11,679 | INFO     | executing command: ls -lF /data/boinchome/slots/5
[2024-09-23 12:57:26] 2024-09-23 16:57:11,700 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,700 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,700 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,700 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,702 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-23 12:57:26] 2024-09-23 16:57:11,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,702 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-23 12:57:26] 2024-09-23 16:57:11,702 | INFO     | job 6342860148 has completed (purged errors)
[2024-09-23 12:57:26] 2024-09-23 16:57:11,702 | INFO     | overall cleanup function is called
[2024-09-23 12:57:26] 2024-09-23 16:57:12,710 | INFO     | --- collectZombieJob: --- 10, [1816300]
[2024-09-23 12:57:26] 2024-09-23 16:57:12,710 | INFO     | zombie collector waiting for pid 1816300
[2024-09-23 12:57:26] 2024-09-23 16:57:12,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-23 12:57:26] 2024-09-23 16:57:12,711 | INFO     | collected zombie processes
[2024-09-23 12:57:26] 2024-09-23 16:57:12,711 | INFO     | will  attempt to kill all subprocesses of pid=1816300
[2024-09-23 12:57:26] 2024-09-23 16:57:12,889 | INFO     | process IDs to be killed: [1816300] (in reverse order)
[2024-09-23 12:57:26] 2024-09-23 16:57:12,996 | WARNING  | found no corresponding commands to process id(s)
[2024-09-23 12:57:26] 2024-09-23 16:57:12,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-23 12:57:26] 2024-09-23 16:57:13,007 | INFO     | did not find any defunct processes belonging to 1816300
[2024-09-23 12:57:26] 2024-09-23 16:57:13,015 | INFO     | did not find any defunct processes belonging to 1816300
[2024-09-23 12:57:26] 2024-09-23 16:57:13,016 | INFO     | ready for new job
[2024-09-23 12:57:26] 2024-09-23 16:57:13,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-23 12:57:26] 2024-09-23 16:57:13,018 | INFO     | **************************************
[2024-09-23 12:57:26] 2024-09-23 16:57:13,018 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-23 12:57:26] 2024-09-23 16:57:13,018 | INFO     | **************************************
[2024-09-23 12:57:26] 2024-09-23 16:57:13,018 | INFO     | 
[2024-09-23 12:57:26] 2024-09-23 16:57:13,022 | INFO     | architecture information:
[2024-09-23 12:57:26] 2024-09-23 16:57:13,022 | INFO     | executing command: cat /etc/os-release
[2024-09-23 12:57:26] 2024-09-23 16:57:13,041 | INFO     | cat /etc/os-release:
[2024-09-23 12:57:26] NAME="CentOS Linux"
[2024-09-23 12:57:26] VERSION="7 (Core)"
[2024-09-23 12:57:26] ID="centos"
[2024-09-23 12:57:26] ID_LIKE="rhel fedora"
[2024-09-23 12:57:26] VERSION_ID="7"
[2024-09-23 12:57:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-23 12:57:26] ANSI_COLOR="0;31"
[2024-09-23 12:57:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-23 12:57:26] HOME_URL="https://www.centos.org/"
[2024-09-23 12:57:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-23 12:57:26] 
[2024-09-23 12:57:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-23 12:57:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-23 12:57:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-23 12:57:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-23 12:57:26] 
[2024-09-23 12:57:26] 2024-09-23 16:57:13,041 | INFO     | **************************************
[2024-09-23 12:57:26] 2024-09-23 16:57:13,544 | INFO     | executing command: df -mP /data/boinchome/slots/5
[2024-09-23 12:57:26] 2024-09-23 16:57:13,568 | INFO     | sufficient remaining disk space (912233857024 B)
[2024-09-23 12:57:26] 2024-09-23 16:57:13,569 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-23 12:57:26] 2024-09-23 16:57:13,569 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-23 12:57:26] 2024-09-23 16:57:13,569 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-23 12:57:26] 2024-09-23 16:57:13,620 | INFO     | all payload control threads have been joined
[2024-09-23 12:57:26] 2024-09-23 16:57:13,644 | INFO     | all job control threads have been joined
[2024-09-23 12:57:26] 2024-09-23 16:57:13,740 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-09-23 12:57:26] 2024-09-23 16:57:13,740 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-09-23 12:57:26] 2024-09-23 16:57:13,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-23 12:57:26] 2024-09-23 16:57:13,741 | INFO     | will abort loop
[2024-09-23 12:57:26] 2024-09-23 16:57:14,186 | INFO     | all data control threads have been joined
[2024-09-23 12:57:26] 2024-09-23 16:57:14,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-23 12:57:26] 2024-09-23 16:57:14,478 | INFO     | found 0 job(s) in 20 queues
[2024-09-23 12:57:26] 2024-09-23 16:57:14,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-23 12:57:26] 2024-09-23 16:57:14,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-23 12:57:26] 2024-09-23 16:57:14,573 | INFO     | [job] retrieve thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:14,575 | INFO     | [job] queue monitor thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:14,606 | INFO     | [payload] validate_pre thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:14,614 | INFO     | [job] create_data_payload thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:14,625 | INFO     | [payload] control thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:14,649 | INFO     | [job] control thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:14,747 | INFO     | [job] job monitor thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:15,192 | INFO     | [data] control thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:15,404 | INFO     | [payload] failed_post thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:15,421 | INFO     | [payload] execute_payloads thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:15,510 | INFO     | [data] copytool_in thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:15,807 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:15,943 | INFO     | [job] validate thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:16,115 | INFO     | [payload] validate_post thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:16,313 | INFO     | [data] copytool_out thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:16,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-23 12:57:26] 2024-09-23 16:57:20,855 | INFO     | [data] queue_monitor thread has finished
[2024-09-23 12:57:26] 2024-09-23 16:57:21,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872071812928)>', '<ExcThread(monitor, started 139871045809920)>']
[2024-09-23 12:57:26] 2024-09-23 16:57:21,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-23 12:57:26] 2024-09-23 16:57:21,510 | INFO     | [monitor] control thread has ended
[2024-09-23 12:57:26] 2024-09-23 16:57:26,095 | INFO     | all workflow threads have been joined
[2024-09-23 12:57:26] 2024-09-23 16:57:26,096 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-23 12:57:26] 2024-09-23 16:57:26,096 | INFO     | traces error code: 0
[2024-09-23 12:57:26] 2024-09-23 16:57:26,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-23 12:57:26] 2024-09-23 16:57:26,199 [wrapper] ==== pilot stdout END ====
[2024-09-23 12:57:26] 2024-09-23 16:57:26,204 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-23 12:57:26] 2024-09-23 16:57:26,207 [wrapper] pilotpid: 1796010
[2024-09-23 12:57:26] 2024-09-23 16:57:26,211 [wrapper] Pilot exit status: 0
[2024-09-23 12:57:26] 2024-09-23 16:57:26,222 [wrapper] pandaids: 6342860148
[2024-09-23 12:57:26] 2024-09-23 16:57:26,306 [wrapper] cleanup supervisor_pilot 2474486 1796011
[2024-09-23 12:57:26] 2024-09-23 16:57:26,310 [wrapper] Test setup, not cleaning
[2024-09-23 12:57:26] 2024-09-23 16:57:26,314 [wrapper] ==== wrapper stdout END ====
[2024-09-23 12:57:26] 2024-09-23 16:57:26,317 [wrapper] ==== wrapper stderr END ====
[2024-09-23 12:57:26] 2024-09-23 16:57:26,324 [wrapper] apfmon messages muted
[2024-09-23 12:57:26]  *** Error codes and diagnostics ***
[2024-09-23 12:57:26]     "exeErrorCode": 0,
[2024-09-23 12:57:26]     "exeErrorDiag": "",
[2024-09-23 12:57:26]     "pilotErrorCode": 0,
[2024-09-23 12:57:26]     "pilotErrorDiag": "",
[2024-09-23 12:57:26]  *** Listing of results directory ***
[2024-09-23 12:57:26] total 596932
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas    482533 Sep 23 08:54 pilot3.tar.gz
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas      5655 Sep 23 09:13 queuedata.json
[2024-09-23 12:57:26] -rwx------ 1 boincer umatlas     33679 Sep 23 09:15 runpilot2-wrapper.sh
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas       100 Sep 23 11:34 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-23 12:57:26] -rwxr-xr-x 1 boincer umatlas      7986 Sep 23 11:34 run_atlas
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas       105 Sep 23 11:34 job.xml
[2024-09-23 12:57:26] -rw-r--r-- 2 boincer umatlas 442538074 Sep 23 11:34 EVNT.41078629._000190.pool.root.1
[2024-09-23 12:57:26] -rw-r--r-- 2 boincer umatlas     17539 Sep 23 11:34 start_atlas.sh
[2024-09-23 12:57:26] drwxrwx--x 2 boincer umatlas      4096 Sep 23 11:34 shared
[2024-09-23 12:57:26] -rw-r--r-- 2 boincer umatlas    495959 Sep 23 11:34 input.tar.gz
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas         0 Sep 23 11:34 boinc_lockfile
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas      2553 Sep 23 11:34 pandaJob.out
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas       461 Sep 23 11:34 setup.sh.local
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas   1011132 Sep 23 11:36 agis_schedconf.cvmfs.json
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas   1618603 Sep 23 11:36 agis_ddmendpoints.agis.ALL.json
[2024-09-23 12:57:26] drwx------ 4 boincer umatlas      4096 Sep 23 11:36 pilot3
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas      9221 Sep 23 12:55 init_data.xml
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas        95 Sep 23 12:56 pilot_heartbeat.json
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas 163301849 Sep 23 12:56 HITS.41078631._029301.pool.root.1
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas      1061 Sep 23 12:57 memory_monitor_summary.json
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas    305162 Sep 23 12:57 log.41078631._029301.job.log.tgz.1
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas      8192 Sep 23 12:57 boinc_mmap_file
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas        27 Sep 23 12:57 wrapper_checkpoint.txt
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas      7756 Sep 23 12:57 heartbeat.json
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas       531 Sep 23 12:57 boinc_task_state.xml
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas      4403 Sep 23 12:57 pilotlog.txt
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas    476824 Sep 23 12:57 log.41078631._029301.job.log.1
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas       357 Sep 23 12:57 output.list
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas       620 Sep 23 12:57 runtime_log
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas    798720 Sep 23 12:57 result.tar.gz
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas     11382 Sep 23 12:57 runtime_log.err
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas       645 Sep 23 12:57 1W0LDmy5xC6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDm84hKDmInlV3m.diag
[2024-09-23 12:57:26] -rw-r--r-- 1 boincer umatlas     21515 Sep 23 12:57 stderr.txt
[2024-09-23 12:57:26] HITS file was successfully produced:
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas 163301849 Sep 23 12:56 shared/HITS.pool.root.1
[2024-09-23 12:57:26]  *** Contents of shared directory: ***
[2024-09-23 12:57:26] total 592940
[2024-09-23 12:57:26] -rw-r--r-- 2 boincer umatlas 442538074 Sep 23 11:34 ATLAS.root_0
[2024-09-23 12:57:26] -rw-r--r-- 2 boincer umatlas     17539 Sep 23 11:34 start_atlas.sh
[2024-09-23 12:57:26] -rw-r--r-- 2 boincer umatlas    495959 Sep 23 11:34 input.tar.gz
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas 163301849 Sep 23 12:56 HITS.pool.root.1
[2024-09-23 12:57:26] -rw------- 1 boincer umatlas    798720 Sep 23 12:57 result.tar.gz
12:57:27 (1778685): run_atlas exited; CPU time 20404.568335
12:57:27 (1778685): called boinc_finish(0)

</stderr_txt>
]]>

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