Stderr output

<core_client_version>7.22.1</core_client_version>
<![CDATA[
<stderr_txt>
14:46:48 (86316): wrapper (7.7.26015): starting
14:46:48 (86316): wrapper: running run_atlas (--nthreads 12)
[2024-09-23 14:46:48] Arguments: --nthreads 12
[2024-09-23 14:46:48] Threads: 12
[2024-09-23 14:46:48] Checking for CVMFS
[2024-09-23 14:46:48] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-23 14:46:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-23 14:46:48] Running cvmfs_config stat atlas.cern.ch
[2024-09-23 14:46:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-23 14:46:49] 2.11.0.0 2382716 2090 110360 137564 1 186 5610638 6144001 9186 130560 0 30773811 99.908 3234041 939 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2024-09-23 14:46:49] CVMFS is ok
[2024-09-23 14:46:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-23 14:46:49] Checking for apptainer binary...
[2024-09-23 14:46:49] apptainer is not installed, using version from CVMFS
[2024-09-23 14:46:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-23 14:46:49] radiat0r
[2024-09-23 14:46:49] apptainer works
[2024-09-23 14:46:49] Set ATHENA_PROC_NUMBER=12
[2024-09-23 14:46:49] Set ATHENA_CORE_NUMBER=12
[2024-09-23 14:46:49] Starting ATLAS job with PandaID=6342597699
[2024-09-23 14:46:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-23 15:43:24]  *** The last 200 lines of the pilot log: ***
[2024-09-23 15:43:24]  domain=
[2024-09-23 15:43:24]  filesize=342045
[2024-09-23 15:43:24]  filetype=log
[2024-09-23 15:43:24]  guid=7a085c1f-a1cd-4535-b1a3-3d13b45ffc36
[2024-09-23 15:43:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-23 15:43:24]  is_tar=False
[2024-09-23 15:43:24]  lfn=log.41078631._028001.job.log.tgz.1
[2024-09-23 15:43:24]  mtime=0
[2024-09-23 15:43:24]  protocol_id=None
[2024-09-23 15:43:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-23 15:43:24]  replicas=None
[2024-09-23 15:43:24]  scope=mc23_13p6TeV
[2024-09-23 15:43:24]  status=None
[2024-09-23 15:43:24]  status_code=0
[2024-09-23 15:43:24]  storage_token=
[2024-09-23 15:43:24]  surl=/home/boinc/slots/23/PanDA_Pilot-6342597699/log.41078631._028001.job.log.tgz.1
[2024-09-23 15:43:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/b5/log.41078631._028001.job.log.tgz.1
[2024-09-23 15:43:24]  workdir=None
[2024-09-23 15:43:24] ]
[2024-09-23 15:43:24] 2024-09-23 15:42:57,828 | INFO     | transferring file log.41078631._028001.job.log.tgz.1 from /home/boinc/slots/23/PanDA_Pilot-6342597699/log.41078631._028001.job.log.tgz.1 to /home/boinc/slots/23/lo
[2024-09-23 15:43:24] 2024-09-23 15:42:57,828 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/23/PanDA_Pilot-6342597699/log.41078631._028001.job.log.tgz.1 /home/boinc/slots/23/log.41078631._028001.job.log
[2024-09-23 15:43:24] 2024-09-23 15:42:57,844 | INFO     | adding to output.list: log.41078631._028001.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/b5/log.41078631._028001.job.log.tg
[2024-09-23 15:43:24] 2024-09-23 15:42:57,845 | INFO     | summary of transferred files:
[2024-09-23 15:43:24] 2024-09-23 15:42:57,845 | INFO     |  -- lfn=log.41078631._028001.job.log.tgz.1, status_code=0, status=transferred
[2024-09-23 15:43:24] 2024-09-23 15:42:57,845 | INFO     | stage-out finished correctly
[2024-09-23 15:43:24] 2024-09-23 15:42:58,449 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-23 15:43:24] 2024-09-23 15:42:59,525 | INFO     | job 6342597699 has state=finished
[2024-09-23 15:43:24] 2024-09-23 15:42:59,525 | INFO     | preparing for final server update for job 6342597699 in state='finished'
[2024-09-23 15:43:24] 2024-09-23 15:42:59,526 | INFO     | this job has now completed (state=finished)
[2024-09-23 15:43:24] 2024-09-23 15:42:59,526 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-23 15:43:24] 2024-09-23 15:42:59,526 | INFO     | log transfer has been attempted: DONE
[2024-09-23 15:43:24] 2024-09-23 15:42:59,526 | INFO     | job 6342597699 has finished - writing final server update
[2024-09-23 15:43:24] 2024-09-23 15:42:59,527 | INFO     | total number of processed events: 400 (read)
[2024-09-23 15:43:24] 2024-09-23 15:42:59,560 | INFO     | executing command: lscpu
[2024-09-23 15:43:24] 2024-09-23 15:42:59,668 | INFO     | found 128 cores (64 cores per socket, 2 sockets)
[2024-09-23 15:43:24] 2024-09-23 15:42:59,668 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-23 15:43:24] 2024-09-23 15:42:59,728 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-23 15:43:24] 2024-09-23 15:43:03,602 | INFO     | CPU arch script returned: x86-64-v3
[2024-09-23 15:43:24] 2024-09-23 15:43:03,603 | INFO     | using path: /home/boinc/slots/23/PanDA_Pilot-6342597699/memory_monitor_summary.json (trf name=prmon)
[2024-09-23 15:43:24] 2024-09-23 15:43:03,608 | INFO     | extracted standard info from prmon json
[2024-09-23 15:43:24] 2024-09-23 15:43:03,609 | INFO     | extracted standard memory fields from prmon json
[2024-09-23 15:43:24] 2024-09-23 15:43:03,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-23 15:43:24] 2024-09-23 15:43:03,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-23 15:43:24] 2024-09-23 15:43:03,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-23 15:43:24] 2024-09-23 15:43:03,612 | INFO     | fitting pss+swap vs Time
[2024-09-23 15:43:24] 2024-09-23 15:43:03,612 | INFO     | model: linear, x: [1727103144.0, 1727103205.0, 1727103266.0, 1727103327.0, 1727103388.0, 1727103449.0, 1727103510.0, 1727103571.0, 1727103632.0, 1727103693.0, 1727
[2024-09-23 15:43:24] 2024-09-23 15:43:03,612 | INFO     | sum of square deviations: 34277852.0
[2024-09-23 15:43:24] 2024-09-23 15:43:03,612 | INFO     | sum of deviations: 12559848821.0
[2024-09-23 15:43:24] 2024-09-23 15:43:03,612 | INFO     | mean x: 1727104577.5
[2024-09-23 15:43:24] 2024-09-23 15:43:03,612 | INFO     | mean y: 2478826.2083333335
[2024-09-23 15:43:24] 2024-09-23 15:43:03,613 | INFO     | -- intersect: -632831001855.6348
[2024-09-23 15:43:24] 2024-09-23 15:43:03,613 | INFO     | intersect: -632831001855.6348
[2024-09-23 15:43:24] 2024-09-23 15:43:03,613 | INFO     | chi2: 1.8357641871581691
[2024-09-23 15:43:24] 2024-09-23 15:43:03,613 | INFO     | -- intersect: -632831001855.6348
[2024-09-23 15:43:24] 2024-09-23 15:43:03,613 | INFO     | current memory leak: 366.41 B/s (using 48 data points, chi2=1.84)
[2024-09-23 15:43:24] 2024-09-23 15:43:03,613 | INFO     | ..............................
[2024-09-23 15:43:24] 2024-09-23 15:43:03,614 | INFO     | . Timing measurements:
[2024-09-23 15:43:24] 2024-09-23 15:43:03,614 | INFO     | . get job = 0 s
[2024-09-23 15:43:24] 2024-09-23 15:43:03,614 | INFO     | . initial setup = 1 s
[2024-09-23 15:43:24] 2024-09-23 15:43:03,614 | INFO     | . payload setup = 4 s
[2024-09-23 15:43:24] 2024-09-23 15:43:03,614 | INFO     | . stage-in = 0 s
[2024-09-23 15:43:24] 2024-09-23 15:43:03,614 | INFO     | . payload execution = 3337 s
[2024-09-23 15:43:24] 2024-09-23 15:43:03,614 | INFO     | . stage-out = 0 s
[2024-09-23 15:43:24] 2024-09-23 15:43:03,614 | INFO     | . log creation = 0 s
[2024-09-23 15:43:24] 2024-09-23 15:43:03,614 | INFO     | ..............................
[2024-09-23 15:43:24] 2024-09-23 15:43:03,713 | INFO     | 
[2024-09-23 15:43:24] 2024-09-23 15:43:03,713 | INFO     | job summary report
[2024-09-23 15:43:24] 2024-09-23 15:43:03,713 | INFO     | --------------------------------------------------
[2024-09-23 15:43:24] 2024-09-23 15:43:03,713 | INFO     | PanDA job id: 6342597699
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | task id: 41078631
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | errors: (none)
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | pilot state: finished 
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | transexitcode: 0
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | exeerrorcode: 0
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | exeerrordiag: 
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | exitcode: 0
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | exitmsg: OK
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | cpuconsumptiontime: 30731 s
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | nevents: 400
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | neventsw: 0
[2024-09-23 15:43:24] 2024-09-23 15:43:03,714 | INFO     | pid: 109938
[2024-09-23 15:43:24] 2024-09-23 15:43:03,715 | INFO     | pgrp: 109938
[2024-09-23 15:43:24] 2024-09-23 15:43:03,715 | INFO     | corecount: 12
[2024-09-23 15:43:24] 2024-09-23 15:43:03,715 | INFO     | event service: False
[2024-09-23 15:43:24] 2024-09-23 15:43:03,715 | INFO     | sizes: {0: 2440087, 1: 2440286, 4: 2440492, 11: 2440520, 3345: 2466033, 3347: 2475173, 3352: 2475287}
[2024-09-23 15:43:24] 2024-09-23 15:43:03,715 | INFO     | --------------------------------------------------
[2024-09-23 15:43:24] 2024-09-23 15:43:03,715 | INFO     | 
[2024-09-23 15:43:24] 2024-09-23 15:43:03,715 | INFO     | executing command: ls -lF /home/boinc/slots/23
[2024-09-23 15:43:24] 2024-09-23 15:43:03,896 | WARNING  | process 109938 is no longer using CPU - aborting
[2024-09-23 15:43:24] 2024-09-23 15:43:03,897 | INFO     | aborting job monitoring since job object (job id=6342597699) has expired
[2024-09-23 15:43:24] 2024-09-23 15:43:03,910 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,910 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,910 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,912 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-23 15:43:24] 2024-09-23 15:43:03,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,912 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-23 15:43:24] 2024-09-23 15:43:03,912 | INFO     | job 6342597699 has completed (purged errors)
[2024-09-23 15:43:24] 2024-09-23 15:43:03,912 | INFO     | overall cleanup function is called
[2024-09-23 15:43:24] 2024-09-23 15:43:04,921 | INFO     | --- collectZombieJob: --- 10, [109938]
[2024-09-23 15:43:24] 2024-09-23 15:43:04,921 | INFO     | zombie collector waiting for pid 109938
[2024-09-23 15:43:24] 2024-09-23 15:43:04,921 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-23 15:43:24] 2024-09-23 15:43:04,921 | INFO     | collected zombie processes
[2024-09-23 15:43:24] 2024-09-23 15:43:04,921 | INFO     | will  attempt to kill all subprocesses of pid=109938
[2024-09-23 15:43:24] 2024-09-23 15:43:05,198 | INFO     | process IDs to be killed: [109938] (in reverse order)
[2024-09-23 15:43:24] 2024-09-23 15:43:05,346 | WARNING  | found no corresponding commands to process id(s)
[2024-09-23 15:43:24] 2024-09-23 15:43:05,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-23 15:43:24] 2024-09-23 15:43:05,375 | INFO     | did not find any defunct processes belonging to 109938
[2024-09-23 15:43:24] 2024-09-23 15:43:05,401 | INFO     | did not find any defunct processes belonging to 109938
[2024-09-23 15:43:24] 2024-09-23 15:43:05,402 | INFO     | ready for new job
[2024-09-23 15:43:24] 2024-09-23 15:43:05,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-23 15:43:24] 2024-09-23 15:43:05,403 | INFO     | **************************************
[2024-09-23 15:43:24] 2024-09-23 15:43:05,403 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-23 15:43:24] 2024-09-23 15:43:05,403 | INFO     | **************************************
[2024-09-23 15:43:24] 2024-09-23 15:43:05,403 | INFO     | 
[2024-09-23 15:43:24] 2024-09-23 15:43:05,432 | INFO     | architecture information:
[2024-09-23 15:43:24] 2024-09-23 15:43:05,432 | INFO     | executing command: cat /etc/os-release
[2024-09-23 15:43:24] 2024-09-23 15:43:05,446 | INFO     | cat /etc/os-release:
[2024-09-23 15:43:24] NAME="CentOS Linux"
[2024-09-23 15:43:24] VERSION="7 (Core)"
[2024-09-23 15:43:24] ID="centos"
[2024-09-23 15:43:24] ID_LIKE="rhel fedora"
[2024-09-23 15:43:24] VERSION_ID="7"
[2024-09-23 15:43:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-23 15:43:24] ANSI_COLOR="0;31"
[2024-09-23 15:43:24] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-23 15:43:24] HOME_URL="https://www.centos.org/"
[2024-09-23 15:43:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-23 15:43:24] 
[2024-09-23 15:43:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-23 15:43:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-23 15:43:24] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-23 15:43:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-23 15:43:24] 
[2024-09-23 15:43:24] 2024-09-23 15:43:05,446 | INFO     | **************************************
[2024-09-23 15:43:24] 2024-09-23 15:43:05,949 | INFO     | executing command: df -mP /home/boinc/slots/23
[2024-09-23 15:43:24] 2024-09-23 15:43:05,967 | INFO     | sufficient remaining disk space (1706013229056 B)
[2024-09-23 15:43:24] 2024-09-23 15:43:05,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-23 15:43:24] 2024-09-23 15:43:05,967 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-23 15:43:24] 2024-09-23 15:43:05,967 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-23 15:43:24] 2024-09-23 15:43:06,156 | INFO     | all data control threads have been joined
[2024-09-23 15:43:24] 2024-09-23 15:43:06,353 | INFO     | all payload control threads have been joined
[2024-09-23 15:43:24] 2024-09-23 15:43:06,400 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-09-23 15:43:24] 2024-09-23 15:43:06,400 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-09-23 15:43:24] 2024-09-23 15:43:06,400 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-23 15:43:24] 2024-09-23 15:43:06,400 | INFO     | will abort loop
[2024-09-23 15:43:24] 2024-09-23 15:43:06,426 | INFO     | found 0 job(s) in 20 queues
[2024-09-23 15:43:24] 2024-09-23 15:43:06,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-23 15:43:24] 2024-09-23 15:43:06,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-23 15:43:24] 2024-09-23 15:43:06,445 | INFO     | all job control threads have been joined
[2024-09-23 15:43:24] 2024-09-23 15:43:06,972 | INFO     | [job] retrieve thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,042 | INFO     | [payload] failed_post thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,158 | INFO     | [data] control thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,182 | INFO     | [data] copytool_in thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,239 | INFO     | [payload] validate_post thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,359 | INFO     | [payload] control thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,402 | INFO     | [job] job monitor thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,450 | INFO     | [job] control thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,755 | INFO     | [job] create_data_payload thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,775 | INFO     | [job] validate thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,831 | INFO     | [payload] validate_pre thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,890 | INFO     | [payload] execute_payloads thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:07,970 | INFO     | [data] copytool_out thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:08,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-23 15:43:24] 2024-09-23 15:43:09,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-23 15:43:24] 2024-09-23 15:43:09,728 | INFO     | [job] queue monitor thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:13,054 | INFO     | [data] queue_monitor thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:16,966 | INFO     | job.realtimelogging is not enabled
[2024-09-23 15:43:24] 2024-09-23 15:43:17,971 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-23 15:43:24] 2024-09-23 15:43:19,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140422400423744)>', '<ExcThread(monitor, started 140421741147904)>']
[2024-09-23 15:43:24] 2024-09-23 15:43:19,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-23 15:43:24] 2024-09-23 15:43:19,483 | INFO     | [monitor] control thread has ended
[2024-09-23 15:43:24] 2024-09-23 15:43:24,302 | INFO     | all workflow threads have been joined
[2024-09-23 15:43:24] 2024-09-23 15:43:24,303 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-23 15:43:24] 2024-09-23 15:43:24,303 | INFO     | traces error code: 0
[2024-09-23 15:43:24] 2024-09-23 15:43:24,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-23 15:43:24] 2024-09-23 15:43:24,436 [wrapper] ==== pilot stdout END ====
[2024-09-23 15:43:24] 2024-09-23 15:43:24,439 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-23 15:43:24] 2024-09-23 15:43:24,441 [wrapper] pilotpid: 91163
[2024-09-23 15:43:24] 2024-09-23 15:43:24,444 [wrapper] Pilot exit status: 0
[2024-09-23 15:43:24] 2024-09-23 15:43:24,451 [wrapper] pandaids: 6342597699
[2024-09-23 15:43:24] 2024-09-23 15:43:24,558 [wrapper] cleanup supervisor_pilot  296053 91164
[2024-09-23 15:43:24] 2024-09-23 15:43:24,561 [wrapper] Test setup, not cleaning
[2024-09-23 15:43:24] 2024-09-23 15:43:24,564 [wrapper] ==== wrapper stdout END ====
[2024-09-23 15:43:24] 2024-09-23 15:43:24,566 [wrapper] ==== wrapper stderr END ====
[2024-09-23 15:43:24] 2024-09-23 15:43:24,570 [wrapper] apfmon messages muted
[2024-09-23 15:43:24]  *** Error codes and diagnostics ***
[2024-09-23 15:43:24]     "exeErrorCode": 0,
[2024-09-23 15:43:24]     "exeErrorDiag": "",
[2024-09-23 15:43:24]     "pilotErrorCode": 0,
[2024-09-23 15:43:24]     "pilotErrorDiag": "",
[2024-09-23 15:43:24]  *** Listing of results directory ***
[2024-09-23 15:43:24] total 595516
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc    482533 Sep 23 10:54 pilot3.tar.gz
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc      5655 Sep 23 11:22 queuedata.json
[2024-09-23 15:43:24] -rwx------ 1 boinc boinc     33679 Sep 23 11:23 runpilot2-wrapper.sh
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc       100 Sep 23 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-23 15:43:24] -rwxr-xr-x 1 boinc boinc      7986 Sep 23 14:46 run_atlas
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc       105 Sep 23 14:46 job.xml
[2024-09-23 15:43:24] -rw-r--r-- 2 boinc boinc     17539 Sep 23 14:46 start_atlas.sh
[2024-09-23 15:43:24] drwxrwx--x 2 boinc boinc      4096 Sep 23 14:46 shared
[2024-09-23 15:43:24] -rw-r--r-- 2 boinc boinc    495962 Sep 23 14:46 input.tar.gz
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc      9894 Sep 23 14:46 init_data.xml
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc         0 Sep 23 14:46 boinc_lockfile
[2024-09-23 15:43:24] -rw-r--r-- 2 boinc boinc 437030589 Sep 23 14:46 EVNT.41078629._000662.pool.root.1
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc      2556 Sep 23 14:46 pandaJob.out
[2024-09-23 15:43:24] -rw------- 1 boinc boinc       424 Sep 23 14:46 setup.sh.local
[2024-09-23 15:43:24] -rw------- 1 boinc boinc   1011116 Sep 23 14:46 agis_schedconf.cvmfs.json
[2024-09-23 15:43:24] -rw------- 1 boinc boinc   1618603 Sep 23 14:46 agis_ddmendpoints.agis.ALL.json
[2024-09-23 15:43:24] drwx------ 4 boinc boinc      4096 Sep 23 14:46 pilot3
[2024-09-23 15:43:24] -rw------- 1 boinc boinc        95 Sep 23 15:42 pilot_heartbeat.json
[2024-09-23 15:43:24] -rw------- 1 boinc boinc 167605357 Sep 23 15:42 HITS.41078631._028001.pool.root.1
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc       531 Sep 23 15:42 boinc_task_state.xml
[2024-09-23 15:43:24] -rw------- 1 boinc boinc      1023 Sep 23 15:42 memory_monitor_summary.json
[2024-09-23 15:43:24] -rw------- 1 boinc boinc    342045 Sep 23 15:42 log.41078631._028001.job.log.tgz.1
[2024-09-23 15:43:24] -rw------- 1 boinc boinc      7650 Sep 23 15:43 heartbeat.json
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc        27 Sep 23 15:43 wrapper_checkpoint.txt
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc      8192 Sep 23 15:43 boinc_mmap_file
[2024-09-23 15:43:24] -rw------- 1 boinc boinc      4473 Sep 23 15:43 pilotlog.txt
[2024-09-23 15:43:24] -rw------- 1 boinc boinc    318029 Sep 23 15:43 log.41078631._028001.job.log.1
[2024-09-23 15:43:24] -rw------- 1 boinc boinc       357 Sep 23 15:43 output.list
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc       620 Sep 23 15:43 runtime_log
[2024-09-23 15:43:24] -rw------- 1 boinc boinc    675840 Sep 23 15:43 result.tar.gz
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc     10919 Sep 23 15:43 runtime_log.err
[2024-09-23 15:43:24] -rw------- 1 boinc boinc       631 Sep 23 15:43 W1ILDmkLwC6n9Rq4apOajLDm4fhM0noT9bVorHsSDm1tWKDmAK3d2m.diag
[2024-09-23 15:43:24] -rw-r--r-- 1 boinc boinc     20815 Sep 23 15:43 stderr.txt
[2024-09-23 15:43:24] HITS file was successfully produced:
[2024-09-23 15:43:24] -rw------- 1 boinc boinc 167605357 Sep 23 15:42 shared/HITS.pool.root.1
[2024-09-23 15:43:24]  *** Contents of shared directory: ***
[2024-09-23 15:43:24] total 591644
[2024-09-23 15:43:24] -rw-r--r-- 2 boinc boinc     17539 Sep 23 14:46 start_atlas.sh
[2024-09-23 15:43:24] -rw-r--r-- 2 boinc boinc    495962 Sep 23 14:46 input.tar.gz
[2024-09-23 15:43:24] -rw-r--r-- 2 boinc boinc 437030589 Sep 23 14:46 ATLAS.root_0
[2024-09-23 15:43:24] -rw------- 1 boinc boinc 167605357 Sep 23 15:42 HITS.pool.root.1
[2024-09-23 15:43:24] -rw------- 1 boinc boinc    675840 Sep 23 15:43 result.tar.gz
15:43:26 (86316): run_atlas exited; CPU time 30599.329373
15:43:26 (86316): called boinc_finish(0)

</stderr_txt>
]]>

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