Stderr output

<core_client_version>7.22.1</core_client_version>
<![CDATA[
<stderr_txt>
13:46:13 (3574810): wrapper (7.7.26015): starting
13:46:13 (3574810): wrapper: running run_atlas (--nthreads 12)
[2024-09-23 13:46:13] Arguments: --nthreads 12
[2024-09-23 13:46:13] Threads: 12
[2024-09-23 13:46:13] Checking for CVMFS
[2024-09-23 13:46:13] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-23 13:46:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-23 13:46:13] Running cvmfs_config stat atlas.cern.ch
[2024-09-23 13:46:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-23 13:46:14] 2.11.0.0 2382716 2029 108156 137561 1 186 5584211 6144000 9165 130560 0 29620207 99.905 3231585 940 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2024-09-23 13:46:14] CVMFS is ok
[2024-09-23 13:46:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-23 13:46:14] Checking for apptainer binary...
[2024-09-23 13:46:14] apptainer is not installed, using version from CVMFS
[2024-09-23 13:46:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-23 13:46:14] radiat0r
[2024-09-23 13:46:14] apptainer works
[2024-09-23 13:46:14] Set ATHENA_PROC_NUMBER=12
[2024-09-23 13:46:14] Set ATHENA_CORE_NUMBER=12
[2024-09-23 13:46:14] Starting ATLAS job with PandaID=6342469039
[2024-09-23 13:46:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/boinc/slots/46 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-23 14:40:32]  *** The last 200 lines of the pilot log: ***
[2024-09-23 14:40:32]  filesize=360334
[2024-09-23 14:40:32]  filetype=log
[2024-09-23 14:40:32]  guid=5137dd2c-e44d-4dff-8e55-9a31f80fb74a
[2024-09-23 14:40:32]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-23 14:40:32]  is_tar=False
[2024-09-23 14:40:32]  lfn=log.41078631._027573.job.log.tgz.1
[2024-09-23 14:40:32]  mtime=0
[2024-09-23 14:40:32]  protocol_id=None
[2024-09-23 14:40:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-23 14:40:32]  replicas=None
[2024-09-23 14:40:32]  scope=mc23_13p6TeV
[2024-09-23 14:40:32]  status=None
[2024-09-23 14:40:32]  status_code=0
[2024-09-23 14:40:32]  storage_token=
[2024-09-23 14:40:32]  surl=/home/boinc/slots/46/PanDA_Pilot-6342469039/log.41078631._027573.job.log.tgz.1
[2024-09-23 14:40:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/98/log.41078631._027573.job.log.tgz.1
[2024-09-23 14:40:32]  workdir=None
[2024-09-23 14:40:32] ]
[2024-09-23 14:40:32] 2024-09-23 14:40:08,798 | INFO     | transferring file log.41078631._027573.job.log.tgz.1 from /home/boinc/slots/46/PanDA_Pilot-6342469039/log.41078631._027573.job.log.tgz.1 to /home/boinc/slots/46/lo
[2024-09-23 14:40:32] 2024-09-23 14:40:08,798 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/46/PanDA_Pilot-6342469039/log.41078631._027573.job.log.tgz.1 /home/boinc/slots/46/log.41078631._027573.job.log
[2024-09-23 14:40:32] 2024-09-23 14:40:08,821 | INFO     | adding to output.list: log.41078631._027573.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/98/log.41078631._027573.job.log.tg
[2024-09-23 14:40:32] 2024-09-23 14:40:08,822 | INFO     | summary of transferred files:
[2024-09-23 14:40:32] 2024-09-23 14:40:08,822 | INFO     |  -- lfn=log.41078631._027573.job.log.tgz.1, status_code=0, status=transferred
[2024-09-23 14:40:32] 2024-09-23 14:40:08,823 | INFO     | stage-out finished correctly
[2024-09-23 14:40:32] 2024-09-23 14:40:10,647 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-23 14:40:32] 2024-09-23 14:40:11,219 | INFO     | monitor loop #241: job 0:6342469039 is in state 'finished'
[2024-09-23 14:40:32] 2024-09-23 14:40:11,219 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-23 14:40:32] 2024-09-23 14:40:11,460 | INFO     | job 6342469039 has state=finished
[2024-09-23 14:40:32] 2024-09-23 14:40:11,460 | INFO     | preparing for final server update for job 6342469039 in state='finished'
[2024-09-23 14:40:32] 2024-09-23 14:40:11,461 | INFO     | this job has now completed (state=finished)
[2024-09-23 14:40:32] 2024-09-23 14:40:11,461 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-23 14:40:32] 2024-09-23 14:40:11,461 | INFO     | log transfer has been attempted: DONE
[2024-09-23 14:40:32] 2024-09-23 14:40:11,461 | INFO     | job 6342469039 has finished - writing final server update
[2024-09-23 14:40:32] 2024-09-23 14:40:11,462 | INFO     | total number of processed events: 400 (read)
[2024-09-23 14:40:32] 2024-09-23 14:40:11,498 | INFO     | executing command: lscpu
[2024-09-23 14:40:32] 2024-09-23 14:40:11,617 | INFO     | found 128 cores (64 cores per socket, 2 sockets)
[2024-09-23 14:40:32] 2024-09-23 14:40:11,617 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-23 14:40:32] 2024-09-23 14:40:11,687 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-23 14:40:32] 2024-09-23 14:40:13,723 | INFO     | monitor loop #242: job 0:6342469039 is in state 'finished'
[2024-09-23 14:40:32] 2024-09-23 14:40:13,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-23 14:40:32] 2024-09-23 14:40:16,229 | INFO     | monitor loop #243: job 0:6342469039 is in state 'finished'
[2024-09-23 14:40:32] 2024-09-23 14:40:16,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-23 14:40:32] 2024-09-23 14:40:16,402 | INFO     | CPU arch script returned: x86-64-v3
[2024-09-23 14:40:32] 2024-09-23 14:40:16,402 | INFO     | using path: /home/boinc/slots/46/PanDA_Pilot-6342469039/memory_monitor_summary.json (trf name=prmon)
[2024-09-23 14:40:32] 2024-09-23 14:40:16,403 | INFO     | extracted standard info from prmon json
[2024-09-23 14:40:32] 2024-09-23 14:40:16,403 | INFO     | extracted standard memory fields from prmon json
[2024-09-23 14:40:32] 2024-09-23 14:40:16,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-23 14:40:32] 2024-09-23 14:40:16,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-23 14:40:32] 2024-09-23 14:40:16,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-23 14:40:32] 2024-09-23 14:40:16,405 | INFO     | fitting pss+swap vs Time
[2024-09-23 14:40:32] 2024-09-23 14:40:16,405 | INFO     | model: linear, x: [1727099518.0, 1727099579.0, 1727099640.0, 1727099701.0, 1727099762.0, 1727099823.0, 1727099884.0, 1727099945.0, 1727100006.0, 1727100067.0, 1727
[2024-09-23 14:40:32] 2024-09-23 14:40:16,405 | INFO     | sum of square deviations: 30168007.5
[2024-09-23 14:40:32] 2024-09-23 14:40:16,405 | INFO     | sum of deviations: 12050511783.5
[2024-09-23 14:40:32] 2024-09-23 14:40:16,405 | INFO     | mean x: 1727100890.5
[2024-09-23 14:40:32] 2024-09-23 14:40:16,406 | INFO     | mean y: 2460687.717391304
[2024-09-23 14:40:32] 2024-09-23 14:40:16,406 | INFO     | -- intersect: -689882333071.4857
[2024-09-23 14:40:32] 2024-09-23 14:40:16,406 | INFO     | intersect: -689882333071.4857
[2024-09-23 14:40:32] 2024-09-23 14:40:16,406 | INFO     | chi2: 1.8079782621341498
[2024-09-23 14:40:32] 2024-09-23 14:40:16,406 | INFO     | -- intersect: -689882333071.4857
[2024-09-23 14:40:32] 2024-09-23 14:40:16,406 | INFO     | current memory leak: 399.45 B/s (using 46 data points, chi2=1.81)
[2024-09-23 14:40:32] 2024-09-23 14:40:16,406 | INFO     | ..............................
[2024-09-23 14:40:32] 2024-09-23 14:40:16,406 | INFO     | . Timing measurements:
[2024-09-23 14:40:32] 2024-09-23 14:40:16,406 | INFO     | . get job = 0 s
[2024-09-23 14:40:32] 2024-09-23 14:40:16,406 | INFO     | . initial setup = 1 s
[2024-09-23 14:40:32] 2024-09-23 14:40:16,406 | INFO     | . payload setup = 6 s
[2024-09-23 14:40:32] 2024-09-23 14:40:16,407 | INFO     | . stage-in = 0 s
[2024-09-23 14:40:32] 2024-09-23 14:40:16,407 | INFO     | . payload execution = 3195 s
[2024-09-23 14:40:32] 2024-09-23 14:40:16,407 | INFO     | . stage-out = 0 s
[2024-09-23 14:40:32] 2024-09-23 14:40:16,407 | INFO     | . log creation = 0 s
[2024-09-23 14:40:32] 2024-09-23 14:40:16,407 | INFO     | ..............................
[2024-09-23 14:40:32] 2024-09-23 14:40:16,486 | INFO     | 
[2024-09-23 14:40:32] 2024-09-23 14:40:16,487 | INFO     | job summary report
[2024-09-23 14:40:32] 2024-09-23 14:40:16,487 | INFO     | --------------------------------------------------
[2024-09-23 14:40:32] 2024-09-23 14:40:16,487 | INFO     | PanDA job id: 6342469039
[2024-09-23 14:40:32] 2024-09-23 14:40:16,487 | INFO     | task id: 41078631
[2024-09-23 14:40:32] 2024-09-23 14:40:16,487 | INFO     | errors: (none)
[2024-09-23 14:40:32] 2024-09-23 14:40:16,487 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-23 14:40:32] 2024-09-23 14:40:16,487 | INFO     | pilot state: finished 
[2024-09-23 14:40:32] 2024-09-23 14:40:16,487 | INFO     | transexitcode: 0
[2024-09-23 14:40:32] 2024-09-23 14:40:16,487 | INFO     | exeerrorcode: 0
[2024-09-23 14:40:32] 2024-09-23 14:40:16,487 | INFO     | exeerrordiag: 
[2024-09-23 14:40:32] 2024-09-23 14:40:16,488 | INFO     | exitcode: 0
[2024-09-23 14:40:32] 2024-09-23 14:40:16,488 | INFO     | exitmsg: OK
[2024-09-23 14:40:32] 2024-09-23 14:40:16,488 | INFO     | cpuconsumptiontime: 29344 s
[2024-09-23 14:40:32] 2024-09-23 14:40:16,488 | INFO     | nevents: 400
[2024-09-23 14:40:32] 2024-09-23 14:40:16,488 | INFO     | neventsw: 0
[2024-09-23 14:40:32] 2024-09-23 14:40:16,488 | INFO     | pid: 3613177
[2024-09-23 14:40:32] 2024-09-23 14:40:16,488 | INFO     | pgrp: 3613177
[2024-09-23 14:40:32] 2024-09-23 14:40:16,488 | INFO     | corecount: 12
[2024-09-23 14:40:32] 2024-09-23 14:40:16,488 | INFO     | event service: False
[2024-09-23 14:40:32] 2024-09-23 14:40:16,488 | INFO     | sizes: {0: 2440207, 5: 2440413, 11: 2440469, 3205: 2465836, 3206: 2465835, 3208: 2474847, 3209: 2475031, 3215: 2475201}
[2024-09-23 14:40:32] 2024-09-23 14:40:16,489 | INFO     | --------------------------------------------------
[2024-09-23 14:40:32] 2024-09-23 14:40:16,489 | INFO     | 
[2024-09-23 14:40:32] 2024-09-23 14:40:16,489 | INFO     | executing command: ls -lF /home/boinc/slots/46
[2024-09-23 14:40:32] 2024-09-23 14:40:16,517 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,517 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,517 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,518 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,519 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-23 14:40:32] 2024-09-23 14:40:16,519 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,519 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-23 14:40:32] 2024-09-23 14:40:16,519 | INFO     | job 6342469039 has completed (purged errors)
[2024-09-23 14:40:32] 2024-09-23 14:40:16,519 | INFO     | overall cleanup function is called
[2024-09-23 14:40:32] 2024-09-23 14:40:17,529 | INFO     | --- collectZombieJob: --- 10, [3613177]
[2024-09-23 14:40:32] 2024-09-23 14:40:17,529 | INFO     | zombie collector waiting for pid 3613177
[2024-09-23 14:40:32] 2024-09-23 14:40:17,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-23 14:40:32] 2024-09-23 14:40:17,529 | INFO     | collected zombie processes
[2024-09-23 14:40:32] 2024-09-23 14:40:17,529 | INFO     | will  attempt to kill all subprocesses of pid=3613177
[2024-09-23 14:40:32] 2024-09-23 14:40:17,951 | INFO     | process IDs to be killed: [3613177] (in reverse order)
[2024-09-23 14:40:32] 2024-09-23 14:40:18,200 | WARNING  | found no corresponding commands to process id(s)
[2024-09-23 14:40:32] 2024-09-23 14:40:18,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-23 14:40:32] 2024-09-23 14:40:18,229 | INFO     | did not find any defunct processes belonging to 3613177
[2024-09-23 14:40:32] 2024-09-23 14:40:18,255 | INFO     | did not find any defunct processes belonging to 3613177
[2024-09-23 14:40:32] 2024-09-23 14:40:18,255 | INFO     | ready for new job
[2024-09-23 14:40:32] 2024-09-23 14:40:18,255 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-23 14:40:32] 2024-09-23 14:40:18,257 | INFO     | **************************************
[2024-09-23 14:40:32] 2024-09-23 14:40:18,257 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-23 14:40:32] 2024-09-23 14:40:18,257 | INFO     | **************************************
[2024-09-23 14:40:32] 2024-09-23 14:40:18,257 | INFO     | 
[2024-09-23 14:40:32] 2024-09-23 14:40:18,292 | INFO     | architecture information:
[2024-09-23 14:40:32] 2024-09-23 14:40:18,293 | INFO     | executing command: cat /etc/os-release
[2024-09-23 14:40:32] 2024-09-23 14:40:18,310 | INFO     | cat /etc/os-release:
[2024-09-23 14:40:32] NAME="CentOS Linux"
[2024-09-23 14:40:32] VERSION="7 (Core)"
[2024-09-23 14:40:32] ID="centos"
[2024-09-23 14:40:32] ID_LIKE="rhel fedora"
[2024-09-23 14:40:32] VERSION_ID="7"
[2024-09-23 14:40:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-23 14:40:32] ANSI_COLOR="0;31"
[2024-09-23 14:40:32] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-23 14:40:32] HOME_URL="https://www.centos.org/"
[2024-09-23 14:40:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-23 14:40:32] 
[2024-09-23 14:40:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-23 14:40:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-23 14:40:32] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-23 14:40:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-23 14:40:32] 
[2024-09-23 14:40:32] 2024-09-23 14:40:18,310 | INFO     | **************************************
[2024-09-23 14:40:32] 2024-09-23 14:40:18,813 | INFO     | executing command: df -mP /home/boinc/slots/46
[2024-09-23 14:40:32] 2024-09-23 14:40:18,828 | INFO     | sufficient remaining disk space (1692609282048 B)
[2024-09-23 14:40:32] 2024-09-23 14:40:18,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-23 14:40:32] 2024-09-23 14:40:18,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-23 14:40:32] 2024-09-23 14:40:19,296 | INFO     | found 0 job(s) in 20 queues
[2024-09-23 14:40:32] 2024-09-23 14:40:19,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-23 14:40:32] 2024-09-23 14:40:19,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-23 14:40:32] 2024-09-23 14:40:19,342 | INFO     | all payload control threads have been joined
[2024-09-23 14:40:32] 2024-09-23 14:40:19,363 | INFO     | all data control threads have been joined
[2024-09-23 14:40:32] 2024-09-23 14:40:19,439 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-23 14:40:32] 2024-09-23 14:40:19,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-23 14:40:32] 2024-09-23 14:40:19,740 | INFO     | aborting loop
[2024-09-23 14:40:32] 2024-09-23 14:40:19,833 | INFO     | [job] retrieve thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:20,057 | INFO     | all job control threads have been joined
[2024-09-23 14:40:32] 2024-09-23 14:40:20,116 | INFO     | [job] create_data_payload thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:20,126 | INFO     | [payload] validate_pre thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:20,278 | INFO     | [payload] failed_post thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:20,348 | INFO     | [payload] control thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:20,368 | INFO     | [data] control thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:20,546 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:20,567 | INFO     | [data] copytool_in thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:20,711 | INFO     | [payload] validate_post thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:20,745 | INFO     | [job] job monitor thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:20,906 | INFO     | [payload] execute_payloads thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:21,062 | INFO     | [job] control thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:21,063 | INFO     | [job] validate thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:21,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-23 14:40:32] 2024-09-23 14:40:21,445 | INFO     | [data] copytool_out thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:21,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-23 14:40:32] 2024-09-23 14:40:22,502 | INFO     | [job] queue monitor thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:25,264 | INFO     | [data] queue_monitor thread has finished
[2024-09-23 14:40:32] 2024-09-23 14:40:27,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176260290368)>', '<ExcThread(monitor, started 140175829092096)>']
[2024-09-23 14:40:32] 2024-09-23 14:40:27,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-23 14:40:32] 2024-09-23 14:40:27,339 | INFO     | [monitor] control thread has ended
[2024-09-23 14:40:32] 2024-09-23 14:40:32,133 | INFO     | all workflow threads have been joined
[2024-09-23 14:40:32] 2024-09-23 14:40:32,133 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-23 14:40:32] 2024-09-23 14:40:32,134 | INFO     | traces error code: 0
[2024-09-23 14:40:32] 2024-09-23 14:40:32,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-23 14:40:32] 2024-09-23 14:40:32,294 [wrapper] ==== pilot stdout END ====
[2024-09-23 14:40:32] 2024-09-23 14:40:32,297 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-23 14:40:32] 2024-09-23 14:40:32,300 [wrapper] pilotpid: 3594129
[2024-09-23 14:40:32] 2024-09-23 14:40:32,303 [wrapper] Pilot exit status: 0
[2024-09-23 14:40:32] 2024-09-23 14:40:32,311 [wrapper] pandaids: 6342469039
[2024-09-23 14:40:32] 2024-09-23 14:40:32,417 [wrapper] cleanup supervisor_pilot 3981807 3594130
[2024-09-23 14:40:32] 2024-09-23 14:40:32,420 [wrapper] Test setup, not cleaning
[2024-09-23 14:40:32] 2024-09-23 14:40:32,423 [wrapper] ==== wrapper stdout END ====
[2024-09-23 14:40:32] 2024-09-23 14:40:32,425 [wrapper] ==== wrapper stderr END ====
[2024-09-23 14:40:32] 2024-09-23 14:40:32,429 [wrapper] apfmon messages muted
[2024-09-23 14:40:32]  *** Error codes and diagnostics ***
[2024-09-23 14:40:32]     "exeErrorCode": 0,
[2024-09-23 14:40:32]     "exeErrorDiag": "",
[2024-09-23 14:40:32]     "pilotErrorCode": 0,
[2024-09-23 14:40:32]     "pilotErrorDiag": "",
[2024-09-23 14:40:32]  *** Listing of results directory ***
[2024-09-23 14:40:32] total 591552
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc    482533 Sep 23 09:54 pilot3.tar.gz
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc      5655 Sep 23 10:44 queuedata.json
[2024-09-23 14:40:32] -rwx------ 1 boinc boinc     33679 Sep 23 10:44 runpilot2-wrapper.sh
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc       100 Sep 23 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-23 14:40:32] -rwxr-xr-x 1 boinc boinc      7986 Sep 23 13:46 run_atlas
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc       105 Sep 23 13:46 job.xml
[2024-09-23 14:40:32] -rw-r--r-- 2 boinc boinc     17539 Sep 23 13:46 start_atlas.sh
[2024-09-23 14:40:32] drwxrwx--x 2 boinc boinc      4096 Sep 23 13:46 shared
[2024-09-23 14:40:32] -rw-r--r-- 2 boinc boinc    495959 Sep 23 13:46 input.tar.gz
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc      9894 Sep 23 13:46 init_data.xml
[2024-09-23 14:40:32] -rw-r--r-- 2 boinc boinc 439355787 Sep 23 13:46 EVNT.41078629._000978.pool.root.1
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc         0 Sep 23 13:46 boinc_lockfile
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc      2555 Sep 23 13:46 pandaJob.out
[2024-09-23 14:40:32] -rw------- 1 boinc boinc       424 Sep 23 13:46 setup.sh.local
[2024-09-23 14:40:32] -rw------- 1 boinc boinc   1011050 Sep 23 13:46 agis_schedconf.cvmfs.json
[2024-09-23 14:40:32] -rw------- 1 boinc boinc   1618603 Sep 23 13:46 agis_ddmendpoints.agis.ALL.json
[2024-09-23 14:40:32] drwx------ 4 boinc boinc      4096 Sep 23 13:46 pilot3
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc       530 Sep 23 14:39 boinc_task_state.xml
[2024-09-23 14:40:32] -rw------- 1 boinc boinc 161200709 Sep 23 14:39 HITS.41078631._027573.pool.root.1
[2024-09-23 14:40:32] -rw------- 1 boinc boinc        95 Sep 23 14:39 pilot_heartbeat.json
[2024-09-23 14:40:32] -rw------- 1 boinc boinc      1027 Sep 23 14:40 memory_monitor_summary.json
[2024-09-23 14:40:32] -rw------- 1 boinc boinc    360334 Sep 23 14:40 log.41078631._027573.job.log.tgz.1
[2024-09-23 14:40:32] -rw------- 1 boinc boinc      7660 Sep 23 14:40 heartbeat.json
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc        27 Sep 23 14:40 wrapper_checkpoint.txt
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc      8192 Sep 23 14:40 boinc_mmap_file
[2024-09-23 14:40:32] -rw------- 1 boinc boinc      4215 Sep 23 14:40 pilotlog.txt
[2024-09-23 14:40:32] -rw------- 1 boinc boinc    308073 Sep 23 14:40 log.41078631._027573.job.log.1
[2024-09-23 14:40:32] -rw------- 1 boinc boinc       357 Sep 23 14:40 output.list
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc       620 Sep 23 14:40 runtime_log
[2024-09-23 14:40:32] -rw------- 1 boinc boinc    686080 Sep 23 14:40 result.tar.gz
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc     10919 Sep 23 14:40 runtime_log.err
[2024-09-23 14:40:32] -rw------- 1 boinc boinc       631 Sep 23 14:40 45XMDmmjvC6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmckhKDmaveMvn.diag
[2024-09-23 14:40:32] -rw-r--r-- 1 boinc boinc     20823 Sep 23 14:40 stderr.txt
[2024-09-23 14:40:32] HITS file was successfully produced:
[2024-09-23 14:40:32] -rw------- 1 boinc boinc 161200709 Sep 23 14:39 shared/HITS.pool.root.1
[2024-09-23 14:40:32]  *** Contents of shared directory: ***
[2024-09-23 14:40:32] total 587672
[2024-09-23 14:40:32] -rw-r--r-- 2 boinc boinc     17539 Sep 23 13:46 start_atlas.sh
[2024-09-23 14:40:32] -rw-r--r-- 2 boinc boinc    495959 Sep 23 13:46 input.tar.gz
[2024-09-23 14:40:32] -rw-r--r-- 2 boinc boinc 439355787 Sep 23 13:46 ATLAS.root_0
[2024-09-23 14:40:32] -rw------- 1 boinc boinc 161200709 Sep 23 14:39 HITS.pool.root.1
[2024-09-23 14:40:32] -rw------- 1 boinc boinc    686080 Sep 23 14:40 result.tar.gz
14:40:34 (3574810): run_atlas exited; CPU time 29238.974856
14:40:34 (3574810): called boinc_finish(0)

</stderr_txt>
]]>

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