Stderr output

<core_client_version>7.22.1</core_client_version>
<![CDATA[
<stderr_txt>
12:56:01 (3191310): wrapper (7.7.26015): starting
12:56:01 (3191310): wrapper: running run_atlas (--nthreads 12)
[2024-09-23 12:56:01] Arguments: --nthreads 12
[2024-09-23 12:56:01] Threads: 12
[2024-09-23 12:56:01] Checking for CVMFS
[2024-09-23 12:56:01] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-23 12:56:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-23 12:56:01] Running cvmfs_config stat atlas.cern.ch
[2024-09-23 12:56:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-23 12:56:02] 2.11.0.0 2382716 1979 107332 137559 4 187 3816872 6144000 10514 130560 0 29112693 99.903 3230320 940 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2024-09-23 12:56:02] CVMFS is ok
[2024-09-23 12:56:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-23 12:56:02] Checking for apptainer binary...
[2024-09-23 12:56:02] apptainer is not installed, using version from CVMFS
[2024-09-23 12:56:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-23 12:56:02] radiat0r
[2024-09-23 12:56:02] apptainer works
[2024-09-23 12:56:02] Set ATHENA_PROC_NUMBER=12
[2024-09-23 12:56:02] Set ATHENA_CORE_NUMBER=12
[2024-09-23 12:56:02] Starting ATLAS job with PandaID=6342418857
[2024-09-23 12:56:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/boinc/slots/41 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-23 13:51:00]  *** The last 200 lines of the pilot log: ***
[2024-09-23 13:51:00]  domain=
[2024-09-23 13:51:00]  filesize=349944
[2024-09-23 13:51:00]  filetype=log
[2024-09-23 13:51:00]  guid=6fe4c522-7e63-4db9-a2c9-656a6811367b
[2024-09-23 13:51:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-23 13:51:00]  is_tar=False
[2024-09-23 13:51:00]  lfn=log.41078631._026756.job.log.tgz.1
[2024-09-23 13:51:00]  mtime=0
[2024-09-23 13:51:00]  protocol_id=None
[2024-09-23 13:51:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-23 13:51:00]  replicas=None
[2024-09-23 13:51:00]  scope=mc23_13p6TeV
[2024-09-23 13:51:00]  status=None
[2024-09-23 13:51:00]  status_code=0
[2024-09-23 13:51:00]  storage_token=
[2024-09-23 13:51:00]  surl=/home/boinc/slots/41/PanDA_Pilot-6342418857/log.41078631._026756.job.log.tgz.1
[2024-09-23 13:51:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/62/log.41078631._026756.job.log.tgz.1
[2024-09-23 13:51:00]  workdir=None
[2024-09-23 13:51:00] ]
[2024-09-23 13:51:00] 2024-09-23 13:50:37,435 | INFO     | transferring file log.41078631._026756.job.log.tgz.1 from /home/boinc/slots/41/PanDA_Pilot-6342418857/log.41078631._026756.job.log.tgz.1 to /home/boinc/slots/41/lo
[2024-09-23 13:51:00] 2024-09-23 13:50:37,435 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/41/PanDA_Pilot-6342418857/log.41078631._026756.job.log.tgz.1 /home/boinc/slots/41/log.41078631._026756.job.log
[2024-09-23 13:51:00] 2024-09-23 13:50:37,633 | WARNING  | process 3215045 is no longer using CPU - aborting
[2024-09-23 13:51:00] 2024-09-23 13:50:37,648 | INFO     | adding to output.list: log.41078631._026756.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/62/log.41078631._026756.job.log.tg
[2024-09-23 13:51:00] 2024-09-23 13:50:37,649 | INFO     | summary of transferred files:
[2024-09-23 13:51:00] 2024-09-23 13:50:37,649 | INFO     |  -- lfn=log.41078631._026756.job.log.tgz.1, status_code=0, status=transferred
[2024-09-23 13:51:00] 2024-09-23 13:50:37,649 | INFO     | stage-out finished correctly
[2024-09-23 13:51:00] 2024-09-23 13:50:38,699 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-23 13:51:00] 2024-09-23 13:50:38,789 | INFO     | job 6342418857 has state=finished
[2024-09-23 13:51:00] 2024-09-23 13:50:38,789 | INFO     | preparing for final server update for job 6342418857 in state='finished'
[2024-09-23 13:51:00] 2024-09-23 13:50:38,790 | INFO     | this job has now completed (state=finished)
[2024-09-23 13:51:00] 2024-09-23 13:50:38,790 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-23 13:51:00] 2024-09-23 13:50:38,790 | INFO     | log transfer has been attempted: DONE
[2024-09-23 13:51:00] 2024-09-23 13:50:38,790 | INFO     | job 6342418857 has finished - writing final server update
[2024-09-23 13:51:00] 2024-09-23 13:50:38,790 | INFO     | total number of processed events: 400 (read)
[2024-09-23 13:51:00] 2024-09-23 13:50:38,822 | INFO     | executing command: lscpu
[2024-09-23 13:51:00] 2024-09-23 13:50:38,926 | INFO     | found 128 cores (64 cores per socket, 2 sockets)
[2024-09-23 13:51:00] 2024-09-23 13:50:38,927 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-23 13:51:00] 2024-09-23 13:50:38,980 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-23 13:51:00] 2024-09-23 13:50:40,141 | INFO     | monitor loop #245: job 0:6342418857 is in state 'finished'
[2024-09-23 13:51:00] 2024-09-23 13:50:40,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-23 13:51:00] 2024-09-23 13:50:42,387 | INFO     | CPU arch script returned: x86-64-v3
[2024-09-23 13:51:00] 2024-09-23 13:50:42,388 | INFO     | using path: /home/boinc/slots/41/PanDA_Pilot-6342418857/memory_monitor_summary.json (trf name=prmon)
[2024-09-23 13:51:00] 2024-09-23 13:50:42,389 | INFO     | extracted standard info from prmon json
[2024-09-23 13:51:00] 2024-09-23 13:50:42,389 | INFO     | extracted standard memory fields from prmon json
[2024-09-23 13:51:00] 2024-09-23 13:50:42,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-23 13:51:00] 2024-09-23 13:50:42,390 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-23 13:51:00] 2024-09-23 13:50:42,390 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-23 13:51:00] 2024-09-23 13:50:42,391 | INFO     | fitting pss+swap vs Time
[2024-09-23 13:51:00] 2024-09-23 13:50:42,391 | INFO     | model: linear, x: [1727096502.0, 1727096563.0, 1727096624.0, 1727096685.0, 1727096746.0, 1727096807.0, 1727096868.0, 1727096929.0, 1727096990.0, 1727097051.0, 1727
[2024-09-23 13:51:00] 2024-09-23 13:50:42,391 | INFO     | sum of square deviations: 32179208.0
[2024-09-23 13:51:00] 2024-09-23 13:50:42,391 | INFO     | sum of deviations: 13146536329.0
[2024-09-23 13:51:00] 2024-09-23 13:50:42,391 | INFO     | mean x: 1727097905.0
[2024-09-23 13:51:00] 2024-09-23 13:50:42,391 | INFO     | mean y: 2466698.0425531915
[2024-09-23 13:51:00] 2024-09-23 13:50:42,391 | INFO     | -- intersect: -705588402779.6118
[2024-09-23 13:51:00] 2024-09-23 13:50:42,392 | INFO     | intersect: -705588402779.6118
[2024-09-23 13:51:00] 2024-09-23 13:50:42,392 | INFO     | chi2: 1.819355076312493
[2024-09-23 13:51:00] 2024-09-23 13:50:42,392 | INFO     | -- intersect: -705588402779.6118
[2024-09-23 13:51:00] 2024-09-23 13:50:42,392 | INFO     | current memory leak: 408.54 B/s (using 47 data points, chi2=1.82)
[2024-09-23 13:51:00] 2024-09-23 13:50:42,392 | INFO     | ..............................
[2024-09-23 13:51:00] 2024-09-23 13:50:42,392 | INFO     | . Timing measurements:
[2024-09-23 13:51:00] 2024-09-23 13:50:42,392 | INFO     | . get job = 0 s
[2024-09-23 13:51:00] 2024-09-23 13:50:42,392 | INFO     | . initial setup = 1 s
[2024-09-23 13:51:00] 2024-09-23 13:50:42,392 | INFO     | . payload setup = 5 s
[2024-09-23 13:51:00] 2024-09-23 13:50:42,392 | INFO     | . stage-in = 0 s
[2024-09-23 13:51:00] 2024-09-23 13:50:42,393 | INFO     | . payload execution = 3239 s
[2024-09-23 13:51:00] 2024-09-23 13:50:42,393 | INFO     | . stage-out = 0 s
[2024-09-23 13:51:00] 2024-09-23 13:50:42,393 | INFO     | . log creation = 0 s
[2024-09-23 13:51:00] 2024-09-23 13:50:42,393 | INFO     | ..............................
[2024-09-23 13:51:00] 2024-09-23 13:50:42,454 | INFO     | 
[2024-09-23 13:51:00] 2024-09-23 13:50:42,454 | INFO     | job summary report
[2024-09-23 13:51:00] 2024-09-23 13:50:42,454 | INFO     | --------------------------------------------------
[2024-09-23 13:51:00] 2024-09-23 13:50:42,454 | INFO     | PanDA job id: 6342418857
[2024-09-23 13:51:00] 2024-09-23 13:50:42,454 | INFO     | task id: 41078631
[2024-09-23 13:51:00] 2024-09-23 13:50:42,454 | INFO     | errors: (none)
[2024-09-23 13:51:00] 2024-09-23 13:50:42,454 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | pilot state: finished 
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | transexitcode: 0
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | exeerrorcode: 0
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | exeerrordiag: 
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | exitcode: 0
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | exitmsg: OK
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | cpuconsumptiontime: 29471 s
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | nevents: 400
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | neventsw: 0
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | pid: 3215045
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | pgrp: 3215045
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | corecount: 12
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | event service: False
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | sizes: {0: 2440207, 1: 2440207, 5: 2440441, 11: 2440497, 3249: 2465891, 3251: 2474847, 3252: 2475031, 3256: 2475201}
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | --------------------------------------------------
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | 
[2024-09-23 13:51:00] 2024-09-23 13:50:42,455 | INFO     | executing command: ls -lF /home/boinc/slots/41
[2024-09-23 13:51:00] 2024-09-23 13:50:42,472 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-23 13:51:00] 2024-09-23 13:50:42,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,474 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-23 13:51:00] 2024-09-23 13:50:42,474 | INFO     | job 6342418857 has completed (purged errors)
[2024-09-23 13:51:00] 2024-09-23 13:50:42,474 | INFO     | overall cleanup function is called
[2024-09-23 13:51:00] 2024-09-23 13:50:43,478 | INFO     | --- collectZombieJob: --- 10, [3215045]
[2024-09-23 13:51:00] 2024-09-23 13:50:43,479 | INFO     | zombie collector waiting for pid 3215045
[2024-09-23 13:51:00] 2024-09-23 13:50:43,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-23 13:51:00] 2024-09-23 13:50:43,479 | INFO     | collected zombie processes
[2024-09-23 13:51:00] 2024-09-23 13:50:43,479 | INFO     | will  attempt to kill all subprocesses of pid=3215045
[2024-09-23 13:51:00] 2024-09-23 13:50:43,759 | INFO     | process IDs to be killed: [3215045] (in reverse order)
[2024-09-23 13:51:00] 2024-09-23 13:50:43,917 | WARNING  | found no corresponding commands to process id(s)
[2024-09-23 13:51:00] 2024-09-23 13:50:43,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-23 13:51:00] 2024-09-23 13:50:43,941 | INFO     | did not find any defunct processes belonging to 3215045
[2024-09-23 13:51:00] 2024-09-23 13:50:43,961 | INFO     | did not find any defunct processes belonging to 3215045
[2024-09-23 13:51:00] 2024-09-23 13:50:43,961 | INFO     | ready for new job
[2024-09-23 13:51:00] 2024-09-23 13:50:43,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-23 13:51:00] 2024-09-23 13:50:43,963 | INFO     | **************************************
[2024-09-23 13:51:00] 2024-09-23 13:50:43,963 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-23 13:51:00] 2024-09-23 13:50:43,963 | INFO     | **************************************
[2024-09-23 13:51:00] 2024-09-23 13:50:43,963 | INFO     | 
[2024-09-23 13:51:00] 2024-09-23 13:50:43,991 | INFO     | architecture information:
[2024-09-23 13:51:00] 2024-09-23 13:50:43,992 | INFO     | executing command: cat /etc/os-release
[2024-09-23 13:51:00] 2024-09-23 13:50:44,005 | INFO     | cat /etc/os-release:
[2024-09-23 13:51:00] NAME="CentOS Linux"
[2024-09-23 13:51:00] VERSION="7 (Core)"
[2024-09-23 13:51:00] ID="centos"
[2024-09-23 13:51:00] ID_LIKE="rhel fedora"
[2024-09-23 13:51:00] VERSION_ID="7"
[2024-09-23 13:51:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-23 13:51:00] ANSI_COLOR="0;31"
[2024-09-23 13:51:00] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-23 13:51:00] HOME_URL="https://www.centos.org/"
[2024-09-23 13:51:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-23 13:51:00] 
[2024-09-23 13:51:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-23 13:51:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-23 13:51:00] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-23 13:51:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-23 13:51:00] 
[2024-09-23 13:51:00] 2024-09-23 13:50:44,005 | INFO     | **************************************
[2024-09-23 13:51:00] 2024-09-23 13:50:44,509 | INFO     | executing command: df -mP /home/boinc/slots/41
[2024-09-23 13:51:00] 2024-09-23 13:50:44,523 | INFO     | sufficient remaining disk space (1680894590976 B)
[2024-09-23 13:51:00] 2024-09-23 13:50:44,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-23 13:51:00] 2024-09-23 13:50:44,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-23 13:51:00] 2024-09-23 13:50:44,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-23 13:51:00] 2024-09-23 13:50:44,524 | INFO     | aborting loop
[2024-09-23 13:51:00] 2024-09-23 13:50:44,524 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-23 13:51:00] 2024-09-23 13:50:44,525 | INFO     | found 0 job(s) in 20 queues
[2024-09-23 13:51:00] 2024-09-23 13:50:44,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-23 13:51:00] 2024-09-23 13:50:44,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-23 13:51:00] 2024-09-23 13:50:44,721 | INFO     | all job control threads have been joined
[2024-09-23 13:51:00] 2024-09-23 13:50:44,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-23 13:51:00] 2024-09-23 13:50:45,070 | INFO     | all data control threads have been joined
[2024-09-23 13:51:00] 2024-09-23 13:50:45,526 | INFO     | [job] retrieve thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:45,527 | INFO     | [job] job monitor thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:45,718 | INFO     | all payload control threads have been joined
[2024-09-23 13:51:00] 2024-09-23 13:50:45,723 | INFO     | [job] control thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:45,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-23 13:51:00] 2024-09-23 13:50:45,778 | INFO     | [job] validate thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:45,854 | INFO     | [data] copytool_in thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:45,928 | INFO     | [job] create_data_payload thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:46,076 | INFO     | [data] control thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:46,079 | INFO     | [payload] validate_post thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:46,254 | INFO     | [payload] validate_pre thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:46,363 | INFO     | [payload] failed_post thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:46,722 | INFO     | [payload] control thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:46,865 | INFO     | [payload] execute_payloads thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:47,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-23 13:51:00] 2024-09-23 13:50:47,742 | INFO     | [data] copytool_out thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:48,469 | INFO     | [job] queue monitor thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:48,798 | INFO     | [data] queue_monitor thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:54,630 | INFO     | job.realtimelogging is not enabled
[2024-09-23 13:51:00] 2024-09-23 13:50:55,635 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-23 13:51:00] 2024-09-23 13:50:55,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473921230656)>', '<ExcThread(monitor, started 140473213646592)>']
[2024-09-23 13:51:00] 2024-09-23 13:50:56,577 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-23 13:51:00] 2024-09-23 13:50:56,578 | INFO     | [monitor] control thread has ended
[2024-09-23 13:51:00] 2024-09-23 13:51:00,666 | INFO     | all workflow threads have been joined
[2024-09-23 13:51:00] 2024-09-23 13:51:00,667 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-23 13:51:00] 2024-09-23 13:51:00,667 | INFO     | traces error code: 0
[2024-09-23 13:51:00] 2024-09-23 13:51:00,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-23 13:51:00] 2024-09-23 13:51:00,790 [wrapper] ==== pilot stdout END ====
[2024-09-23 13:51:00] 2024-09-23 13:51:00,793 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-23 13:51:00] 2024-09-23 13:51:00,795 [wrapper] pilotpid: 3196731
[2024-09-23 13:51:00] 2024-09-23 13:51:00,797 [wrapper] Pilot exit status: 0
[2024-09-23 13:51:00] 2024-09-23 13:51:00,803 [wrapper] pandaids: 6342418857
[2024-09-23 13:51:00] 2024-09-23 13:51:00,891 [wrapper] cleanup supervisor_pilot 3467241 3196732
[2024-09-23 13:51:00] 2024-09-23 13:51:00,893 [wrapper] Test setup, not cleaning
[2024-09-23 13:51:00] 2024-09-23 13:51:00,895 [wrapper] ==== wrapper stdout END ====
[2024-09-23 13:51:00] 2024-09-23 13:51:00,896 [wrapper] ==== wrapper stderr END ====
[2024-09-23 13:51:00] 2024-09-23 13:51:00,900 [wrapper] apfmon messages muted
[2024-09-23 13:51:00]  *** Error codes and diagnostics ***
[2024-09-23 13:51:00]     "exeErrorCode": 0,
[2024-09-23 13:51:00]     "exeErrorDiag": "",
[2024-09-23 13:51:00]     "pilotErrorCode": 0,
[2024-09-23 13:51:00]     "pilotErrorDiag": "",
[2024-09-23 13:51:00]  *** Listing of results directory ***
[2024-09-23 13:51:00] total 593856
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc    482533 Sep 23 08:56 pilot3.tar.gz
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc      5655 Sep 23 09:32 queuedata.json
[2024-09-23 13:51:00] -rwx------ 1 boinc boinc     33679 Sep 23 09:32 runpilot2-wrapper.sh
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc       100 Sep 23 12:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-23 13:51:00] -rwxr-xr-x 1 boinc boinc      7986 Sep 23 12:56 run_atlas
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc       105 Sep 23 12:56 job.xml
[2024-09-23 13:51:00] -rw-r--r-- 2 boinc boinc 438932677 Sep 23 12:56 EVNT.41078629._000606.pool.root.1
[2024-09-23 13:51:00] -rw-r--r-- 2 boinc boinc     17539 Sep 23 12:56 start_atlas.sh
[2024-09-23 13:51:00] drwxrwx--x 2 boinc boinc      4096 Sep 23 12:56 shared
[2024-09-23 13:51:00] -rw-r--r-- 2 boinc boinc    495958 Sep 23 12:56 input.tar.gz
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc      9894 Sep 23 12:56 init_data.xml
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc         0 Sep 23 12:56 boinc_lockfile
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc      2555 Sep 23 12:56 pandaJob.out
[2024-09-23 13:51:00] -rw------- 1 boinc boinc       424 Sep 23 12:56 setup.sh.local
[2024-09-23 13:51:00] -rw------- 1 boinc boinc   1011833 Sep 23 12:56 agis_schedconf.cvmfs.json
[2024-09-23 13:51:00] -rw------- 1 boinc boinc   1618603 Sep 23 12:56 agis_ddmendpoints.agis.ALL.json
[2024-09-23 13:51:00] drwx------ 4 boinc boinc      4096 Sep 23 12:56 pilot3
[2024-09-23 13:51:00] -rw------- 1 boinc boinc 163980039 Sep 23 13:50 HITS.41078631._026756.pool.root.1
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc       531 Sep 23 13:50 boinc_task_state.xml
[2024-09-23 13:51:00] -rw------- 1 boinc boinc        95 Sep 23 13:50 pilot_heartbeat.json
[2024-09-23 13:51:00] -rw------- 1 boinc boinc      1029 Sep 23 13:50 memory_monitor_summary.json
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc        27 Sep 23 13:50 wrapper_checkpoint.txt
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc      8192 Sep 23 13:50 boinc_mmap_file
[2024-09-23 13:51:00] -rw------- 1 boinc boinc    349944 Sep 23 13:50 log.41078631._026756.job.log.tgz.1
[2024-09-23 13:51:00] -rw------- 1 boinc boinc      7660 Sep 23 13:50 heartbeat.json
[2024-09-23 13:51:00] -rw------- 1 boinc boinc      4410 Sep 23 13:51 pilotlog.txt
[2024-09-23 13:51:00] -rw------- 1 boinc boinc    312646 Sep 23 13:51 log.41078631._026756.job.log.1
[2024-09-23 13:51:00] -rw------- 1 boinc boinc       357 Sep 23 13:51 output.list
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc       620 Sep 23 13:51 runtime_log
[2024-09-23 13:51:00] -rw------- 1 boinc boinc    686080 Sep 23 13:51 result.tar.gz
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc     10919 Sep 23 13:51 runtime_log.err
[2024-09-23 13:51:00] -rw------- 1 boinc boinc       630 Sep 23 13:51 iWTLDmtbuC6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmhZhKDmhSsCsn.diag
[2024-09-23 13:51:00] -rw-r--r-- 1 boinc boinc     20887 Sep 23 13:51 stderr.txt
[2024-09-23 13:51:00] HITS file was successfully produced:
[2024-09-23 13:51:00] -rw------- 1 boinc boinc 163980039 Sep 23 13:50 shared/HITS.pool.root.1
[2024-09-23 13:51:00]  *** Contents of shared directory: ***
[2024-09-23 13:51:00] total 589976
[2024-09-23 13:51:00] -rw-r--r-- 2 boinc boinc 438932677 Sep 23 12:56 ATLAS.root_0
[2024-09-23 13:51:00] -rw-r--r-- 2 boinc boinc     17539 Sep 23 12:56 start_atlas.sh
[2024-09-23 13:51:00] -rw-r--r-- 2 boinc boinc    495958 Sep 23 12:56 input.tar.gz
[2024-09-23 13:51:00] -rw------- 1 boinc boinc 163980039 Sep 23 13:50 HITS.pool.root.1
[2024-09-23 13:51:00] -rw------- 1 boinc boinc    686080 Sep 23 13:51 result.tar.gz
13:51:02 (3191310): run_atlas exited; CPU time 29370.055461
13:51:02 (3191310): called boinc_finish(0)

</stderr_txt>
]]>

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