Stderr output

<core_client_version>7.22.1</core_client_version>
<![CDATA[
<stderr_txt>
12:04:41 (2694320): wrapper (7.7.26015): starting
12:04:41 (2694320): wrapper: running run_atlas (--nthreads 12)
[2024-09-23 12:04:41] Arguments: --nthreads 12
[2024-09-23 12:04:41] Threads: 12
[2024-09-23 12:04:41] Checking for CVMFS
[2024-09-23 12:04:41] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-23 12:04:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-23 12:04:41] Running cvmfs_config stat atlas.cern.ch
[2024-09-23 12:04:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-23 12:04:41] 2.11.0.0 2382716 1928 110860 137558 3 187 3794951 6144001 12356 130560 0 28384473 99.900 3229053 940 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2024-09-23 12:04:41] CVMFS is ok
[2024-09-23 12:04:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-23 12:04:41] Checking for apptainer binary...
[2024-09-23 12:04:41] apptainer is not installed, using version from CVMFS
[2024-09-23 12:04:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-23 12:04:42] radiat0r
[2024-09-23 12:04:42] apptainer works
[2024-09-23 12:04:42] Set ATHENA_PROC_NUMBER=12
[2024-09-23 12:04:42] Set ATHENA_CORE_NUMBER=12
[2024-09-23 12:04:42] Starting ATLAS job with PandaID=6342418615
[2024-09-23 12:04:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/boinc/slots/61 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-23 13:01:24]  *** The last 200 lines of the pilot log: ***
[2024-09-23 13:01:24]  filetype=log
[2024-09-23 13:01:24]  guid=57d9229f-49ea-4c94-a6b3-2e11997cc6b9
[2024-09-23 13:01:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-23 13:01:24]  is_tar=False
[2024-09-23 13:01:24]  lfn=log.41078631._026620.job.log.tgz.1
[2024-09-23 13:01:24]  mtime=0
[2024-09-23 13:01:24]  protocol_id=None
[2024-09-23 13:01:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-23 13:01:24]  replicas=None
[2024-09-23 13:01:24]  scope=mc23_13p6TeV
[2024-09-23 13:01:24]  status=None
[2024-09-23 13:01:24]  status_code=0
[2024-09-23 13:01:24]  storage_token=
[2024-09-23 13:01:24]  surl=/home/boinc/slots/61/PanDA_Pilot-6342418615/log.41078631._026620.job.log.tgz.1
[2024-09-23 13:01:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/8c/log.41078631._026620.job.log.tgz.1
[2024-09-23 13:01:24]  workdir=None
[2024-09-23 13:01:24] ]
[2024-09-23 13:01:24] 2024-09-23 13:01:03,101 | INFO     | transferring file log.41078631._026620.job.log.tgz.1 from /home/boinc/slots/61/PanDA_Pilot-6342418615/log.41078631._026620.job.log.tgz.1 to /home/boinc/slots/61/lo
[2024-09-23 13:01:24] 2024-09-23 13:01:03,102 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/61/PanDA_Pilot-6342418615/log.41078631._026620.job.log.tgz.1 /home/boinc/slots/61/log.41078631._026620.job.log
[2024-09-23 13:01:24] 2024-09-23 13:01:03,120 | INFO     | adding to output.list: log.41078631._026620.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/8c/log.41078631._026620.job.log.tg
[2024-09-23 13:01:24] 2024-09-23 13:01:03,120 | INFO     | summary of transferred files:
[2024-09-23 13:01:24] 2024-09-23 13:01:03,120 | INFO     |  -- lfn=log.41078631._026620.job.log.tgz.1, status_code=0, status=transferred
[2024-09-23 13:01:24] 2024-09-23 13:01:03,121 | INFO     | stage-out finished correctly
[2024-09-23 13:01:24] 2024-09-23 13:01:03,525 | INFO     | 3374s have passed since pilot start
[2024-09-23 13:01:24] 2024-09-23 13:01:03,554 | INFO     | monitor loop #251: job 0:6342418615 is in state 'finished'
[2024-09-23 13:01:24] 2024-09-23 13:01:03,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-23 13:01:24] 2024-09-23 13:01:04,052 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-23 13:01:24] 2024-09-23 13:01:05,303 | INFO     | job 6342418615 has state=finished
[2024-09-23 13:01:24] 2024-09-23 13:01:05,304 | INFO     | preparing for final server update for job 6342418615 in state='finished'
[2024-09-23 13:01:24] 2024-09-23 13:01:05,304 | INFO     | this job has now completed (state=finished)
[2024-09-23 13:01:24] 2024-09-23 13:01:05,304 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-23 13:01:24] 2024-09-23 13:01:05,305 | INFO     | log transfer has been attempted: DONE
[2024-09-23 13:01:24] 2024-09-23 13:01:05,305 | INFO     | job 6342418615 has finished - writing final server update
[2024-09-23 13:01:24] 2024-09-23 13:01:05,305 | INFO     | total number of processed events: 400 (read)
[2024-09-23 13:01:24] 2024-09-23 13:01:05,334 | INFO     | executing command: lscpu
[2024-09-23 13:01:24] 2024-09-23 13:01:05,425 | INFO     | found 128 cores (64 cores per socket, 2 sockets)
[2024-09-23 13:01:24] 2024-09-23 13:01:05,425 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-23 13:01:24] 2024-09-23 13:01:05,479 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-23 13:01:24] 2024-09-23 13:01:06,058 | INFO     | monitor loop #252: job 0:6342418615 is in state 'finished'
[2024-09-23 13:01:24] 2024-09-23 13:01:06,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-23 13:01:24] 2024-09-23 13:01:08,561 | INFO     | monitor loop #253: job 0:6342418615 is in state 'finished'
[2024-09-23 13:01:24] 2024-09-23 13:01:08,561 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-23 13:01:24] 2024-09-23 13:01:09,074 | INFO     | CPU arch script returned: x86-64-v3
[2024-09-23 13:01:24] 2024-09-23 13:01:09,074 | INFO     | using path: /home/boinc/slots/61/PanDA_Pilot-6342418615/memory_monitor_summary.json (trf name=prmon)
[2024-09-23 13:01:24] 2024-09-23 13:01:09,075 | INFO     | extracted standard info from prmon json
[2024-09-23 13:01:24] 2024-09-23 13:01:09,075 | INFO     | extracted standard memory fields from prmon json
[2024-09-23 13:01:24] 2024-09-23 13:01:09,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-23 13:01:24] 2024-09-23 13:01:09,076 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-23 13:01:24] 2024-09-23 13:01:09,076 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-23 13:01:24] 2024-09-23 13:01:09,077 | INFO     | fitting pss+swap vs Time
[2024-09-23 13:01:24] 2024-09-23 13:01:09,077 | INFO     | model: linear, x: [1727093421.0, 1727093482.0, 1727093543.0, 1727093604.0, 1727093665.0, 1727093726.0, 1727093787.0, 1727093848.0, 1727093909.0, 1727093970.0, 1727
[2024-09-23 13:01:24] 2024-09-23 13:01:09,077 | INFO     | sum of square deviations: 34277852.0
[2024-09-23 13:01:24] 2024-09-23 13:01:09,077 | INFO     | sum of deviations: 14211002799.0
[2024-09-23 13:01:24] 2024-09-23 13:01:09,077 | INFO     | mean x: 1727094854.5
[2024-09-23 13:01:24] 2024-09-23 13:01:09,077 | INFO     | mean y: 2469935.0833333335
[2024-09-23 13:01:24] 2024-09-23 13:01:09,077 | INFO     | -- intersect: -716021095702.5184
[2024-09-23 13:01:24] 2024-09-23 13:01:09,077 | INFO     | intersect: -716021095702.5184
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | chi2: 1.8041935616599083
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | -- intersect: -716021095702.5184
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | current memory leak: 414.58 B/s (using 48 data points, chi2=1.80)
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | ..............................
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | . Timing measurements:
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | . get job = 0 s
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | . initial setup = 1 s
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | . payload setup = 5 s
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | . stage-in = 0 s
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | . payload execution = 3347 s
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | . stage-out = 0 s
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | . log creation = 0 s
[2024-09-23 13:01:24] 2024-09-23 13:01:09,078 | INFO     | ..............................
[2024-09-23 13:01:24] 2024-09-23 13:01:09,428 | INFO     | 
[2024-09-23 13:01:24] 2024-09-23 13:01:09,428 | INFO     | job summary report
[2024-09-23 13:01:24] 2024-09-23 13:01:09,428 | INFO     | --------------------------------------------------
[2024-09-23 13:01:24] 2024-09-23 13:01:09,428 | INFO     | PanDA job id: 6342418615
[2024-09-23 13:01:24] 2024-09-23 13:01:09,428 | INFO     | task id: 41078631
[2024-09-23 13:01:24] 2024-09-23 13:01:09,428 | INFO     | errors: (none)
[2024-09-23 13:01:24] 2024-09-23 13:01:09,428 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-23 13:01:24] 2024-09-23 13:01:09,429 | INFO     | pilot state: finished 
[2024-09-23 13:01:24] 2024-09-23 13:01:09,429 | INFO     | transexitcode: 0
[2024-09-23 13:01:24] 2024-09-23 13:01:09,429 | INFO     | exeerrorcode: 0
[2024-09-23 13:01:24] 2024-09-23 13:01:09,429 | INFO     | exeerrordiag: 
[2024-09-23 13:01:24] 2024-09-23 13:01:09,429 | INFO     | exitcode: 0
[2024-09-23 13:01:24] 2024-09-23 13:01:09,429 | INFO     | exitmsg: OK
[2024-09-23 13:01:24] 2024-09-23 13:01:09,429 | INFO     | cpuconsumptiontime: 30145 s
[2024-09-23 13:01:24] 2024-09-23 13:01:09,429 | INFO     | nevents: 400
[2024-09-23 13:01:24] 2024-09-23 13:01:09,429 | INFO     | neventsw: 0
[2024-09-23 13:01:24] 2024-09-23 13:01:09,429 | INFO     | pid: 2715857
[2024-09-23 13:01:24] 2024-09-23 13:01:09,429 | INFO     | pgrp: 2715857
[2024-09-23 13:01:24] 2024-09-23 13:01:09,430 | INFO     | corecount: 12
[2024-09-23 13:01:24] 2024-09-23 13:01:09,430 | INFO     | event service: False
[2024-09-23 13:01:24] 2024-09-23 13:01:09,430 | INFO     | sizes: {0: 2440207, 4: 2440413, 11: 2440441, 3356: 2465959, 3357: 2474915, 3358: 2474971, 3363: 2475269}
[2024-09-23 13:01:24] 2024-09-23 13:01:09,430 | INFO     | --------------------------------------------------
[2024-09-23 13:01:24] 2024-09-23 13:01:09,430 | INFO     | 
[2024-09-23 13:01:24] 2024-09-23 13:01:09,430 | INFO     | executing command: ls -lF /home/boinc/slots/61
[2024-09-23 13:01:24] 2024-09-23 13:01:09,450 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,450 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,452 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-23 13:01:24] 2024-09-23 13:01:09,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,452 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-23 13:01:24] 2024-09-23 13:01:09,452 | INFO     | job 6342418615 has completed (purged errors)
[2024-09-23 13:01:24] 2024-09-23 13:01:09,452 | INFO     | overall cleanup function is called
[2024-09-23 13:01:24] 2024-09-23 13:01:10,458 | INFO     | --- collectZombieJob: --- 10, [2715857]
[2024-09-23 13:01:24] 2024-09-23 13:01:10,459 | INFO     | zombie collector waiting for pid 2715857
[2024-09-23 13:01:24] 2024-09-23 13:01:10,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-23 13:01:24] 2024-09-23 13:01:10,459 | INFO     | collected zombie processes
[2024-09-23 13:01:24] 2024-09-23 13:01:10,459 | INFO     | will  attempt to kill all subprocesses of pid=2715857
[2024-09-23 13:01:24] 2024-09-23 13:01:10,803 | INFO     | process IDs to be killed: [2715857] (in reverse order)
[2024-09-23 13:01:24] 2024-09-23 13:01:10,992 | WARNING  | found no corresponding commands to process id(s)
[2024-09-23 13:01:24] 2024-09-23 13:01:10,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-23 13:01:24] 2024-09-23 13:01:11,029 | INFO     | did not find any defunct processes belonging to 2715857
[2024-09-23 13:01:24] 2024-09-23 13:01:11,061 | INFO     | did not find any defunct processes belonging to 2715857
[2024-09-23 13:01:24] 2024-09-23 13:01:11,061 | INFO     | ready for new job
[2024-09-23 13:01:24] 2024-09-23 13:01:11,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-23 13:01:24] 2024-09-23 13:01:11,063 | INFO     | **************************************
[2024-09-23 13:01:24] 2024-09-23 13:01:11,063 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-23 13:01:24] 2024-09-23 13:01:11,063 | INFO     | **************************************
[2024-09-23 13:01:24] 2024-09-23 13:01:11,063 | INFO     | 
[2024-09-23 13:01:24] 2024-09-23 13:01:11,097 | INFO     | architecture information:
[2024-09-23 13:01:24] 2024-09-23 13:01:11,097 | INFO     | executing command: cat /etc/os-release
[2024-09-23 13:01:24] 2024-09-23 13:01:11,112 | INFO     | cat /etc/os-release:
[2024-09-23 13:01:24] NAME="CentOS Linux"
[2024-09-23 13:01:24] VERSION="7 (Core)"
[2024-09-23 13:01:24] ID="centos"
[2024-09-23 13:01:24] ID_LIKE="rhel fedora"
[2024-09-23 13:01:24] VERSION_ID="7"
[2024-09-23 13:01:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-23 13:01:24] ANSI_COLOR="0;31"
[2024-09-23 13:01:24] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-23 13:01:24] HOME_URL="https://www.centos.org/"
[2024-09-23 13:01:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-23 13:01:24] 
[2024-09-23 13:01:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-23 13:01:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-23 13:01:24] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-23 13:01:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-23 13:01:24] 
[2024-09-23 13:01:24] 2024-09-23 13:01:11,112 | INFO     | **************************************
[2024-09-23 13:01:24] 2024-09-23 13:01:11,615 | INFO     | executing command: df -mP /home/boinc/slots/61
[2024-09-23 13:01:24] 2024-09-23 13:01:11,629 | INFO     | sufficient remaining disk space (1709480869888 B)
[2024-09-23 13:01:24] 2024-09-23 13:01:11,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-23 13:01:24] 2024-09-23 13:01:11,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-23 13:01:24] 2024-09-23 13:01:11,630 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-23 13:01:24] 2024-09-23 13:01:11,646 | INFO     | all payload control threads have been joined
[2024-09-23 13:01:24] 2024-09-23 13:01:12,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-23 13:01:24] 2024-09-23 13:01:12,068 | INFO     | aborting loop
[2024-09-23 13:01:24] 2024-09-23 13:01:12,546 | INFO     | found 0 job(s) in 20 queues
[2024-09-23 13:01:24] 2024-09-23 13:01:12,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-23 13:01:24] 2024-09-23 13:01:12,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-23 13:01:24] 2024-09-23 13:01:12,635 | INFO     | [job] retrieve thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:12,650 | INFO     | [payload] control thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:12,651 | INFO     | [payload] failed_post thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:12,658 | INFO     | all data control threads have been joined
[2024-09-23 13:01:24] 2024-09-23 13:01:12,971 | INFO     | [data] copytool_in thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:13,019 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:13,043 | INFO     | [payload] validate_post thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:13,057 | INFO     | all job control threads have been joined
[2024-09-23 13:01:24] 2024-09-23 13:01:13,073 | INFO     | [job] job monitor thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:13,405 | INFO     | [payload] execute_payloads thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:13,450 | INFO     | [job] validate thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:13,636 | INFO     | [data] copytool_out thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:13,664 | INFO     | [data] control thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:13,810 | INFO     | [job] create_data_payload thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:13,954 | INFO     | [payload] validate_pre thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:14,063 | INFO     | [job] control thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:14,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-23 13:01:24] 2024-09-23 13:01:14,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-23 13:01:24] 2024-09-23 13:01:15,163 | INFO     | [job] queue monitor thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:18,663 | INFO     | [data] queue_monitor thread has finished
[2024-09-23 13:01:24] 2024-09-23 13:01:19,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729205315392)>', '<ExcThread(monitor, started 139728640800512)>']
[2024-09-23 13:01:24] 2024-09-23 13:01:19,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-23 13:01:24] 2024-09-23 13:01:19,579 | INFO     | [monitor] control thread has ended
[2024-09-23 13:01:24] 2024-09-23 13:01:24,297 | INFO     | all workflow threads have been joined
[2024-09-23 13:01:24] 2024-09-23 13:01:24,297 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-23 13:01:24] 2024-09-23 13:01:24,298 | INFO     | traces error code: 0
[2024-09-23 13:01:24] 2024-09-23 13:01:24,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-23 13:01:24] 2024-09-23 13:01:24,433 [wrapper] ==== pilot stdout END ====
[2024-09-23 13:01:24] 2024-09-23 13:01:24,435 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-23 13:01:24] 2024-09-23 13:01:24,438 [wrapper] pilotpid: 2703396
[2024-09-23 13:01:24] 2024-09-23 13:01:24,440 [wrapper] Pilot exit status: 0
[2024-09-23 13:01:24] 2024-09-23 13:01:24,446 [wrapper] pandaids: 6342418615
[2024-09-23 13:01:24] 2024-09-23 13:01:24,541 [wrapper] cleanup supervisor_pilot 3076006 2703397
[2024-09-23 13:01:24] 2024-09-23 13:01:24,544 [wrapper] Test setup, not cleaning
[2024-09-23 13:01:24] 2024-09-23 13:01:24,546 [wrapper] ==== wrapper stdout END ====
[2024-09-23 13:01:24] 2024-09-23 13:01:24,549 [wrapper] ==== wrapper stderr END ====
[2024-09-23 13:01:24] 2024-09-23 13:01:24,553 [wrapper] apfmon messages muted
[2024-09-23 13:01:24]  *** Error codes and diagnostics ***
[2024-09-23 13:01:24]     "exeErrorCode": 0,
[2024-09-23 13:01:24]     "exeErrorDiag": "",
[2024-09-23 13:01:24]     "pilotErrorCode": 0,
[2024-09-23 13:01:24]     "pilotErrorDiag": "",
[2024-09-23 13:01:24]  *** Listing of results directory ***
[2024-09-23 13:01:24] total 605520
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc    482533 Sep 23 08:56 pilot3.tar.gz
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc      5655 Sep 23 09:17 queuedata.json
[2024-09-23 13:01:24] -rwx------ 1 boinc boinc     33679 Sep 23 09:19 runpilot2-wrapper.sh
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc       100 Sep 23 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-23 13:01:24] -rwxr-xr-x 1 boinc boinc      7986 Sep 23 12:04 run_atlas
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc       105 Sep 23 12:04 job.xml
[2024-09-23 13:01:24] -rw-r--r-- 2 boinc boinc     17539 Sep 23 12:04 start_atlas.sh
[2024-09-23 13:01:24] drwxrwx--x 2 boinc boinc      4096 Sep 23 12:04 shared
[2024-09-23 13:01:24] -rw-r--r-- 2 boinc boinc    495973 Sep 23 12:04 input.tar.gz
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc      9894 Sep 23 12:04 init_data.xml
[2024-09-23 13:01:24] -rw-r--r-- 2 boinc boinc 440313807 Sep 23 12:04 EVNT.41078629._000575.pool.root.1
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc         0 Sep 23 12:04 boinc_lockfile
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc      2555 Sep 23 12:04 pandaJob.out
[2024-09-23 13:01:24] -rw------- 1 boinc boinc       424 Sep 23 12:04 setup.sh.local
[2024-09-23 13:01:24] -rw------- 1 boinc boinc   1011625 Sep 23 12:04 agis_schedconf.cvmfs.json
[2024-09-23 13:01:24] -rw------- 1 boinc boinc   1618603 Sep 23 12:04 agis_ddmendpoints.agis.ALL.json
[2024-09-23 13:01:24] drwx------ 4 boinc boinc      4096 Sep 23 12:04 pilot3
[2024-09-23 13:01:24] -rw------- 1 boinc boinc 174518309 Sep 23 13:00 HITS.41078631._026620.pool.root.1
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc       531 Sep 23 13:00 boinc_task_state.xml
[2024-09-23 13:01:24] -rw------- 1 boinc boinc      1025 Sep 23 13:00 memory_monitor_summary.json
[2024-09-23 13:01:24] -rw------- 1 boinc boinc        95 Sep 23 13:01 pilot_heartbeat.json
[2024-09-23 13:01:24] -rw------- 1 boinc boinc    360857 Sep 23 13:01 log.41078631._026620.job.log.tgz.1
[2024-09-23 13:01:24] -rw------- 1 boinc boinc      7656 Sep 23 13:01 heartbeat.json
[2024-09-23 13:01:24] -rw------- 1 boinc boinc      4215 Sep 23 13:01 pilotlog.txt
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc        27 Sep 23 13:01 wrapper_checkpoint.txt
[2024-09-23 13:01:24] -rw------- 1 boinc boinc    320016 Sep 23 13:01 log.41078631._026620.job.log.1
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc      8192 Sep 23 13:01 boinc_mmap_file
[2024-09-23 13:01:24] -rw------- 1 boinc boinc       357 Sep 23 13:01 output.list
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc       620 Sep 23 13:01 runtime_log
[2024-09-23 13:01:24] -rw------- 1 boinc boinc    696320 Sep 23 13:01 result.tar.gz
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc     10919 Sep 23 13:01 runtime_log.err
[2024-09-23 13:01:24] -rw------- 1 boinc boinc       630 Sep 23 13:01 2JNMDmFPuC6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDm9XhKDmcqoKKn.diag
[2024-09-23 13:01:24] -rw-r--r-- 1 boinc boinc     21067 Sep 23 13:01 stderr.txt
[2024-09-23 13:01:24] HITS file was successfully produced:
[2024-09-23 13:01:24] -rw------- 1 boinc boinc 174518309 Sep 23 13:00 shared/HITS.pool.root.1
[2024-09-23 13:01:24]  *** Contents of shared directory: ***
[2024-09-23 13:01:24] total 601624
[2024-09-23 13:01:24] -rw-r--r-- 2 boinc boinc     17539 Sep 23 12:04 start_atlas.sh
[2024-09-23 13:01:24] -rw-r--r-- 2 boinc boinc    495973 Sep 23 12:04 input.tar.gz
[2024-09-23 13:01:24] -rw-r--r-- 2 boinc boinc 440313807 Sep 23 12:04 ATLAS.root_0
[2024-09-23 13:01:24] -rw------- 1 boinc boinc 174518309 Sep 23 13:00 HITS.pool.root.1
[2024-09-23 13:01:24] -rw------- 1 boinc boinc    696320 Sep 23 13:01 result.tar.gz
13:01:26 (2694320): run_atlas exited; CPU time 30037.817074
13:01:26 (2694320): called boinc_finish(0)

</stderr_txt>
]]>

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