Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
17:10:46 (3030327): wrapper (7.7.26015): starting
17:10:46 (3030327): wrapper: running run_atlas (--nthreads 4)
[2024-09-22 17:10:46] Arguments: --nthreads 4
[2024-09-22 17:10:46] Threads: 4
[2024-09-22 17:10:46] Checking for CVMFS
[2024-09-22 17:10:46] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-22 17:10:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-22 17:10:46] Running cvmfs_config stat atlas.cern.ch
[2024-09-22 17:10:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-22 17:10:46] 2.11.4.0 57416 2714 65116 137526 1 187 3345535 6144000 1830 130560 0 10922139 99.998 510597 2091 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-09-22 17:10:46] CVMFS is ok
[2024-09-22 17:10:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-22 17:10:46] Checking for apptainer binary...
[2024-09-22 17:10:46] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-22 17:10:46] Running /usr/bin/apptainer --version
[2024-09-22 17:10:46] apptainer version 1.3.3
[2024-09-22 17:10:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-22 17:10:46] Ryzen8
[2024-09-22 17:10:46] apptainer works
[2024-09-22 17:10:46] Set ATHENA_PROC_NUMBER=4
[2024-09-22 17:10:46] Set ATHENA_CORE_NUMBER=4
[2024-09-22 17:10:46] Starting ATLAS job with PandaID=6341147958
[2024-09-22 17:10:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-22 18:11:16]  *** The last 200 lines of the pilot log: ***
[2024-09-22 18:11:16]  filetype=log
[2024-09-22 18:11:16]  guid=cf673afe-ff5e-47eb-a080-10efb93b7c03
[2024-09-22 18:11:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-22 18:11:16]  is_tar=False
[2024-09-22 18:11:16]  lfn=log.41078631._014897.job.log.tgz.1
[2024-09-22 18:11:16]  mtime=0
[2024-09-22 18:11:16]  protocol_id=None
[2024-09-22 18:11:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-22 18:11:16]  replicas=None
[2024-09-22 18:11:16]  scope=mc23_13p6TeV
[2024-09-22 18:11:16]  status=None
[2024-09-22 18:11:16]  status_code=0
[2024-09-22 18:11:16]  storage_token=
[2024-09-22 18:11:16]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6341147958/log.41078631._014897.job.log.tgz.1
[2024-09-22 18:11:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/b4/log.41078631._014897.job.log.tgz.1
[2024-09-22 18:11:16]  workdir=None
[2024-09-22 18:11:16] ]
[2024-09-22 18:11:16] 2024-09-22 16:10:48,700 | INFO     | transferring file log.41078631._014897.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6341147958/log.41078631._014897.job.log.tgz.1 to /var/lib/boinc/slots/
[2024-09-22 18:11:16] 2024-09-22 16:10:48,700 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6341147958/log.41078631._014897.job.log.tgz.1 /var/lib/boinc/slots/1/log.41078631._014897.job
[2024-09-22 18:11:16] 2024-09-22 16:10:48,712 | INFO     | adding to output.list: log.41078631._014897.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/b4/log.41078631._014897.job.log.tg
[2024-09-22 18:11:16] 2024-09-22 16:10:48,712 | INFO     | summary of transferred files:
[2024-09-22 18:11:16] 2024-09-22 16:10:48,712 | INFO     |  -- lfn=log.41078631._014897.job.log.tgz.1, status_code=0, status=transferred
[2024-09-22 18:11:16] 2024-09-22 16:10:48,712 | INFO     | stage-out finished correctly
[2024-09-22 18:11:16] 2024-09-22 16:10:50,598 | WARNING  | process 3040366 is no longer using CPU - aborting
[2024-09-22 18:11:16] 2024-09-22 16:10:50,964 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-22 18:11:16] 2024-09-22 16:10:53,100 | INFO     | monitor loop #286: job 0:6341147958 is in state 'finished'
[2024-09-22 18:11:16] 2024-09-22 16:10:53,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 18:11:16] 2024-09-22 16:10:53,242 | INFO     | job 6341147958 has state=finished
[2024-09-22 18:11:16] 2024-09-22 16:10:53,242 | INFO     | preparing for final server update for job 6341147958 in state='finished'
[2024-09-22 18:11:16] 2024-09-22 16:10:53,243 | INFO     | this job has now completed (state=finished)
[2024-09-22 18:11:16] 2024-09-22 16:10:53,243 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-22 18:11:16] 2024-09-22 16:10:53,243 | INFO     | log transfer has been attempted: DONE
[2024-09-22 18:11:16] 2024-09-22 16:10:53,243 | INFO     | job 6341147958 has finished - writing final server update
[2024-09-22 18:11:16] 2024-09-22 16:10:53,243 | INFO     | total number of processed events: 400 (read)
[2024-09-22 18:11:16] 2024-09-22 16:10:53,244 | INFO     | executing command: lscpu
[2024-09-22 18:11:16] 2024-09-22 16:10:53,257 | INFO     | found 6 cores (6 cores per socket, 1 sockets)
[2024-09-22 18:11:16] 2024-09-22 16:10:53,258 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-22 18:11:16] 2024-09-22 16:10:53,275 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-22 18:11:16] 2024-09-22 16:10:55,603 | INFO     | monitor loop #287: job 0:6341147958 is in state 'finished'
[2024-09-22 18:11:16] 2024-09-22 16:10:55,603 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 18:11:16] 2024-09-22 16:10:56,880 | INFO     | CPU arch script returned: x86-64-v4
[2024-09-22 18:11:16] 2024-09-22 16:10:56,881 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6341147958/memory_monitor_summary.json (trf name=prmon)
[2024-09-22 18:11:16] 2024-09-22 16:10:56,881 | INFO     | extracted standard info from prmon json
[2024-09-22 18:11:16] 2024-09-22 16:10:56,881 | INFO     | extracted standard memory fields from prmon json
[2024-09-22 18:11:16] 2024-09-22 16:10:56,881 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-22 18:11:16] 2024-09-22 16:10:56,882 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-22 18:11:16] 2024-09-22 16:10:56,882 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-22 18:11:16] 2024-09-22 16:10:56,882 | INFO     | fitting pss+swap vs Time
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | model: linear, x: [1727018174.0, 1727018235.0, 1727018296.0, 1727018357.0, 1727018418.0, 1727018479.0, 1727018540.0, 1727018601.0, 1727018662.0, 1727018723.0, 1727
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | sum of square deviations: 43584073.0
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | sum of deviations: -1282121576.4999998
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | mean x: 1727019729.5
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | mean y: 2428560.7115384615
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | -- intersect: 50806520648.04682
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | intersect: 50806520648.04682
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | chi2: 0.009811163301972028
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | -- intersect: 50806520648.04682
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | current memory leak: -29.42 B/s (using 52 data points, chi2=0.01)
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | ..............................
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | . Timing measurements:
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | . get job = 0 s
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | . initial setup = 1 s
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | . payload setup = 2 s
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | . stage-in = 0 s
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | . payload execution = 3578 s
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | . stage-out = 0 s
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | . log creation = 0 s
[2024-09-22 18:11:16] 2024-09-22 16:10:56,883 | INFO     | ..............................
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | 
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | job summary report
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | --------------------------------------------------
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | PanDA job id: 6341147958
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | task id: 41078631
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | errors: (none)
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | pilot state: finished 
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | transexitcode: 0
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | exeerrorcode: 0
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | exeerrordiag: 
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | exitcode: 0
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | exitmsg: OK
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | cpuconsumptiontime: 12991 s
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | nevents: 400
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | neventsw: 0
[2024-09-22 18:11:16] 2024-09-22 16:10:56,929 | INFO     | pid: 3040366
[2024-09-22 18:11:16] 2024-09-22 16:10:56,930 | INFO     | pgrp: 3040366
[2024-09-22 18:11:16] 2024-09-22 16:10:56,930 | INFO     | corecount: 4
[2024-09-22 18:11:16] 2024-09-22 16:10:56,930 | INFO     | event service: False
[2024-09-22 18:11:16] 2024-09-22 16:10:56,930 | INFO     | sizes: {0: 2440039, 1: 2440238, 2: 2440444, 11: 2440472, 3584: 2466143, 3585: 2475103, 3587: 2475287, 3593: 2475457}
[2024-09-22 18:11:16] 2024-09-22 16:10:56,930 | INFO     | --------------------------------------------------
[2024-09-22 18:11:16] 2024-09-22 16:10:56,930 | INFO     | 
[2024-09-22 18:11:16] 2024-09-22 16:10:56,930 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,942 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,942 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,942 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-22 18:11:16] 2024-09-22 16:10:56,942 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,942 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-22 18:11:16] 2024-09-22 16:10:56,942 | INFO     | job 6341147958 has completed (purged errors)
[2024-09-22 18:11:16] 2024-09-22 16:10:56,942 | INFO     | overall cleanup function is called
[2024-09-22 18:11:16] 2024-09-22 16:10:57,948 | INFO     | --- collectZombieJob: --- 10, [3040366]
[2024-09-22 18:11:16] 2024-09-22 16:10:57,948 | INFO     | zombie collector waiting for pid 3040366
[2024-09-22 18:11:16] 2024-09-22 16:10:57,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-22 18:11:16] 2024-09-22 16:10:57,948 | INFO     | collected zombie processes
[2024-09-22 18:11:16] 2024-09-22 16:10:57,948 | INFO     | will  attempt to kill all subprocesses of pid=3040366
[2024-09-22 18:11:16] 2024-09-22 16:10:57,988 | INFO     | process IDs to be killed: [3040366] (in reverse order)
[2024-09-22 18:11:16] 2024-09-22 16:10:58,013 | WARNING  | found no corresponding commands to process id(s)
[2024-09-22 18:11:16] 2024-09-22 16:10:58,013 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-22 18:11:16] 2024-09-22 16:10:58,015 | INFO     | did not find any defunct processes belonging to 3040366
[2024-09-22 18:11:16] 2024-09-22 16:10:58,017 | INFO     | did not find any defunct processes belonging to 3040366
[2024-09-22 18:11:16] 2024-09-22 16:10:58,017 | INFO     | ready for new job
[2024-09-22 18:11:16] 2024-09-22 16:10:58,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-22 18:11:16] 2024-09-22 16:10:58,017 | INFO     | **************************************
[2024-09-22 18:11:16] 2024-09-22 16:10:58,018 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-22 18:11:16] 2024-09-22 16:10:58,018 | INFO     | **************************************
[2024-09-22 18:11:16] 2024-09-22 16:10:58,018 | INFO     | 
[2024-09-22 18:11:16] 2024-09-22 16:10:58,018 | INFO     | architecture information:
[2024-09-22 18:11:16] 2024-09-22 16:10:58,018 | INFO     | executing command: cat /etc/os-release
[2024-09-22 18:11:16] 2024-09-22 16:10:58,026 | INFO     | cat /etc/os-release:
[2024-09-22 18:11:16] NAME="CentOS Linux"
[2024-09-22 18:11:16] VERSION="7 (Core)"
[2024-09-22 18:11:16] ID="centos"
[2024-09-22 18:11:16] ID_LIKE="rhel fedora"
[2024-09-22 18:11:16] VERSION_ID="7"
[2024-09-22 18:11:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-22 18:11:16] ANSI_COLOR="0;31"
[2024-09-22 18:11:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-22 18:11:16] HOME_URL="https://www.centos.org/"
[2024-09-22 18:11:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-22 18:11:16] 
[2024-09-22 18:11:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-22 18:11:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-22 18:11:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-22 18:11:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-22 18:11:16] 
[2024-09-22 18:11:16] 2024-09-22 16:10:58,027 | INFO     | **************************************
[2024-09-22 18:11:16] 2024-09-22 16:10:58,529 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2024-09-22 18:11:16] 2024-09-22 16:10:58,539 | INFO     | sufficient remaining disk space (99214163968 B)
[2024-09-22 18:11:16] 2024-09-22 16:10:58,539 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-22 18:11:16] 2024-09-22 16:10:58,539 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-22 18:11:16] 2024-09-22 16:10:58,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-22 18:11:16] 2024-09-22 16:10:58,540 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-22 18:11:16] 2024-09-22 16:10:58,540 | INFO     | found 0 job(s) in 20 queues
[2024-09-22 18:11:16] 2024-09-22 16:10:58,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-22 18:11:16] 2024-09-22 16:10:58,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-22 18:11:16] 2024-09-22 16:10:59,063 | INFO     | all payload control threads have been joined
[2024-09-22 18:11:16] 2024-09-22 16:10:59,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-22 18:11:16] 2024-09-22 16:10:59,110 | INFO     | aborting loop
[2024-09-22 18:11:16] 2024-09-22 16:10:59,130 | INFO     | all data control threads have been joined
[2024-09-22 18:11:16] 2024-09-22 16:10:59,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-22 18:11:16] 2024-09-22 16:10:59,545 | INFO     | [job] retrieve thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:10:59,545 | INFO     | [job] queue monitor thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:10:59,823 | INFO     | [payload] execute_payloads thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:10:59,883 | INFO     | all job control threads have been joined
[2024-09-22 18:11:16] 2024-09-22 16:11:00,067 | INFO     | [payload] control thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:00,113 | INFO     | [job] job monitor thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:00,133 | INFO     | [data] control thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:00,150 | INFO     | [job] validate thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:00,253 | INFO     | [job] create_data_payload thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:00,437 | INFO     | [payload] validate_pre thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:00,563 | INFO     | [payload] validate_post thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:00,630 | INFO     | [data] copytool_in thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:00,780 | INFO     | [payload] failed_post thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:00,887 | INFO     | [job] control thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:01,269 | INFO     | [data] copytool_out thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:01,517 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-22 18:11:16] 2024-09-22 16:11:05,522 | INFO     | [data] queue_monitor thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:09,202 | INFO     | job.realtimelogging is not enabled
[2024-09-22 18:11:16] 2024-09-22 16:11:10,207 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-22 18:11:16] 2024-09-22 16:11:11,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651961321280)>', '<ExcThread(monitor, started 140651614152448)>']
[2024-09-22 18:11:16] 2024-09-22 16:11:12,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-22 18:11:16] 2024-09-22 16:11:12,595 | INFO     | [monitor] control thread has ended
[2024-09-22 18:11:16] 2024-09-22 16:11:16,797 | INFO     | all workflow threads have been joined
[2024-09-22 18:11:16] 2024-09-22 16:11:16,797 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-22 18:11:16] 2024-09-22 16:11:16,797 | INFO     | traces error code: 0
[2024-09-22 18:11:16] 2024-09-22 16:11:16,797 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-22 18:11:16] 2024-09-22 16:11:16,857 [wrapper] ==== pilot stdout END ====
[2024-09-22 18:11:16] 2024-09-22 16:11:16,858 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-22 18:11:16] 2024-09-22 16:11:16,860 [wrapper] pilotpid: 3033966
[2024-09-22 18:11:16] 2024-09-22 16:11:16,861 [wrapper] Pilot exit status: 0
[2024-09-22 18:11:16] 2024-09-22 16:11:16,865 [wrapper] pandaids: 6341147958
[2024-09-22 18:11:16] 2024-09-22 16:11:16,883 [wrapper] cleanup supervisor_pilot 3097359 3033967
[2024-09-22 18:11:16] 2024-09-22 16:11:16,884 [wrapper] Test setup, not cleaning
[2024-09-22 18:11:16] 2024-09-22 16:11:16,885 [wrapper] ==== wrapper stdout END ====
[2024-09-22 18:11:16] 2024-09-22 16:11:16,886 [wrapper] ==== wrapper stderr END ====
[2024-09-22 18:11:16] 2024-09-22 16:11:16,889 [wrapper] apfmon messages muted
[2024-09-22 18:11:16]  *** Error codes and diagnostics ***
[2024-09-22 18:11:16]     "exeErrorCode": 0,
[2024-09-22 18:11:16]     "exeErrorDiag": "",
[2024-09-22 18:11:16]     "pilotErrorCode": 0,
[2024-09-22 18:11:16]     "pilotErrorDiag": "",
[2024-09-22 18:11:16]  *** Listing of results directory ***
[2024-09-22 18:11:16] insgesamt 587124
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc    482533 22. Sep 07:00 pilot3.tar.gz
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc      5655 22. Sep 07:37 queuedata.json
[2024-09-22 18:11:16] -rwx------ 1 boinc boinc     33679 22. Sep 07:38 runpilot2-wrapper.sh
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc       100 22. Sep 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-22 18:11:16] -rwxr-xr-x 1 boinc boinc      7986 22. Sep 17:10 run_atlas
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc       105 22. Sep 17:10 job.xml
[2024-09-22 18:11:16] -rw-r--r-- 2 boinc boinc 440313807 22. Sep 17:10 EVNT.41078629._000575.pool.root.1
[2024-09-22 18:11:16] -rw-r--r-- 2 boinc boinc     17539 22. Sep 17:10 start_atlas.sh
[2024-09-22 18:11:16] drwxrwx--x 2 boinc boinc      4096 22. Sep 17:10 shared
[2024-09-22 18:11:16] -rw-r--r-- 2 boinc boinc    495958 22. Sep 17:10 input.tar.gz
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc      7130 22. Sep 17:10 init_data.xml
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc         0 22. Sep 17:10 boinc_lockfile
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc      2556 22. Sep 17:10 pandaJob.out
[2024-09-22 18:11:16] -rw------- 1 boinc boinc       461 22. Sep 17:10 setup.sh.local
[2024-09-22 18:11:16] -rw------- 1 boinc boinc   1009491 22. Sep 17:10 agis_schedconf.cvmfs.json
[2024-09-22 18:11:16] -rw------- 1 boinc boinc   1618603 22. Sep 17:10 agis_ddmendpoints.agis.ALL.json
[2024-09-22 18:11:16] drwx------ 4 boinc boinc      4096 22. Sep 17:10 pilot3
[2024-09-22 18:11:16] -rw------- 1 boinc boinc 155884130 22. Sep 18:10 HITS.41078631._014897.pool.root.1
[2024-09-22 18:11:16] -rw------- 1 boinc boinc      1028 22. Sep 18:10 memory_monitor_summary.json
[2024-09-22 18:11:16] -rw------- 1 boinc boinc    220906 22. Sep 18:10 log.41078631._014897.job.log.tgz.1
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc      8192 22. Sep 18:10 boinc_mmap_file
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc        27 22. Sep 18:10 wrapper_checkpoint.txt
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc       530 22. Sep 18:10 boinc_task_state.xml
[2024-09-22 18:11:16] -rw------- 1 boinc boinc      7681 22. Sep 18:10 heartbeat.json
[2024-09-22 18:11:16] -rw------- 1 boinc boinc        95 22. Sep 18:10 pilot_heartbeat.json
[2024-09-22 18:11:16] -rw------- 1 boinc boinc      4410 22. Sep 18:11 pilotlog.txt
[2024-09-22 18:11:16] -rw------- 1 boinc boinc    359006 22. Sep 18:11 log.41078631._014897.job.log.1
[2024-09-22 18:11:16] -rw------- 1 boinc boinc       357 22. Sep 18:11 output.list
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc       620 22. Sep 18:11 runtime_log
[2024-09-22 18:11:16] -rw------- 1 boinc boinc    604160 22. Sep 18:11 result.tar.gz
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc     11329 22. Sep 18:11 runtime_log.err
[2024-09-22 18:11:16] -rw------- 1 boinc boinc       629 22. Sep 18:11 CEYMDmbTUC6n9Rq4apOajLDm4fhM0noT9bVorHsSDmnjUKDmoj5IPn.diag
[2024-09-22 18:11:16] -rw-r--r-- 1 boinc boinc     21048 22. Sep 18:11 stderr.txt
[2024-09-22 18:11:16] HITS file was successfully produced:
[2024-09-22 18:11:16] -rw------- 1 boinc boinc 155884130 22. Sep 18:10 shared/HITS.pool.root.1
[2024-09-22 18:11:16]  *** Contents of shared directory: ***
[2024-09-22 18:11:16] insgesamt 583336
[2024-09-22 18:11:16] -rw-r--r-- 2 boinc boinc 440313807 22. Sep 17:10 ATLAS.root_0
[2024-09-22 18:11:16] -rw-r--r-- 2 boinc boinc     17539 22. Sep 17:10 start_atlas.sh
[2024-09-22 18:11:16] -rw-r--r-- 2 boinc boinc    495958 22. Sep 17:10 input.tar.gz
[2024-09-22 18:11:16] -rw------- 1 boinc boinc 155884130 22. Sep 18:10 HITS.pool.root.1
[2024-09-22 18:11:16] -rw------- 1 boinc boinc    604160 22. Sep 18:11 result.tar.gz
18:11:18 (3030327): run_atlas exited; CPU time 12979.329165
18:11:18 (3030327): called boinc_finish(0)

</stderr_txt>
]]>

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