Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2024-09-23 05:47:00 (292457): Detected: vboxwrapper 26206
2024-09-23 05:47:00 (292457): Detected: BOINC client v8.0.4
2024-09-23 05:47:00 (292457): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2024-09-23 05:47:00 (292457): Successfully copied 'init_data.xml' to the shared directory.
2024-09-23 05:47:00 (292457): Create VM. (boinc_b057a13499216a88, slot#12)
2024-09-23 05:47:00 (292457): Setting Memory Size for VM. (4800MB)
2024-09-23 05:47:00 (292457): Setting CPU Count for VM. (8)
2024-09-23 05:47:00 (292457): Setting Chipset Options for VM.
2024-09-23 05:47:00 (292457): Setting Graphics Controller Options for VM.
2024-09-23 05:47:00 (292457): Setting Boot Options for VM.
2024-09-23 05:47:00 (292457): Setting Network Configuration for NAT.
2024-09-23 05:47:00 (292457): Enabling VM Network Access.
2024-09-23 05:47:00 (292457): Disabling USB Support for VM.
2024-09-23 05:47:00 (292457): Disabling COM Port Support for VM.
2024-09-23 05:47:00 (292457): Disabling LPT Port Support for VM.
2024-09-23 05:47:00 (292457): Disabling Audio Support for VM.
2024-09-23 05:47:00 (292457): Disabling Clipboard Support for VM.
2024-09-23 05:47:00 (292457): Disabling Drag and Drop Support for VM.
2024-09-23 05:47:00 (292457): Adding storage controller(s) to VM.
2024-09-23 05:47:01 (292457): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-09-23 05:47:02 (292457): Adding VirtualBox Guest Additions to VM.
2024-09-23 05:47:02 (292457): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-09-23 05:47:02 (292457): forwarding host port 57221 to guest port 80
2024-09-23 05:47:02 (292457): Enabling remote desktop for VM.
2024-09-23 05:47:02 (292457): Enabling shared directory for VM.
2024-09-23 05:47:02 (292457): Starting VM using VBoxManage interface. (boinc_b057a13499216a88, slot#12)
2024-09-23 05:47:03 (292457): Successfully started VM. (PID = '292735')
2024-09-23 05:47:03 (292457): Reporting VM Process ID to BOINC.
2024-09-23 05:47:03 (292457): Guest Log: BIOS: VirtualBox 7.0.20
2024-09-23 05:47:03 (292457): Guest Log: CPUID EDX: 0x178bfbff
2024-09-23 05:47:03 (292457): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-09-23 05:47:03 (292457): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-09-23 05:47:03 (292457): VM state change detected. (old = 'poweredoff', new = 'running')
2024-09-23 05:47:03 (292457): Detected: Web Application Enabled (http://localhost:57221)
2024-09-23 05:47:03 (292457): Detected: Remote Desktop Enabled (localhost:54425)
2024-09-23 05:47:03 (292457): Preference change detected
2024-09-23 05:47:03 (292457): Setting CPU throttle for VM. (5%)
2024-09-23 05:47:03 (292457): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-09-23 05:47:05 (292457): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-09-23 05:47:05 (292457): Guest Log: BIOS: Booting from Hard Disk...
2024-09-23 05:47:14 (292457): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-09-23 05:47:14 (292457): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-09-23 05:47:14 (292457): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-09-23 05:47:59 (292457): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-09-23 05:48:00 (292457): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-09-23 05:49:08 (292457): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-09-23 05:49:08 (292457): Guest Log: 00:00:00.000148 main     Log opened 2024-09-23T03:49:06.289665000Z
2024-09-23 05:49:08 (292457): Guest Log: 00:00:00.000250 main     OS Product: Linux
2024-09-23 05:49:08 (292457): Guest Log: 00:00:00.000283 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-09-23 05:49:08 (292457): Guest Log: 00:00:00.000303 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-09-23 05:49:08 (292457): Guest Log: 00:00:00.000318 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-09-23 05:49:08 (292457): Guest Log: 00:00:00.000318 main     Process ID: 1388
2024-09-23 05:49:08 (292457): Guest Log: 00:00:00.000318 main     Package type: LINUX_64BITS_GENERIC
2024-09-23 05:49:08 (292457): Guest Log: 00:00:00.000934 main     5.2.32 r132073 started. Verbose level = 0
2024-09-23 05:49:09 (292457): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-09-23 05:49:09 (292457): Guest Log: [INFO] Mounting shared directory
2024-09-23 05:49:09 (292457): Guest Log: [INFO] Checking for init_data.xml
2024-09-23 05:49:17 (292457): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-09-23 05:49:17 (292457): Guest Log: [INFO] Detected branch: prod
2024-09-23 05:49:17 (292457): Guest Log: This is the prod version of the ATLAS job wrapper
2024-09-23 05:49:17 (292457): Guest Log: Copying input files
2024-09-23 05:49:38 (292457): Guest Log: Copied input files into RunAtlas.
2024-09-23 05:49:38 (292457): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-09-23 05:49:38 (292457): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-09-23 05:49:38 (292457): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-09-23 05:49:38 (292457): Guest Log: Further information can be found at the LHC@home message board.
2024-09-23 05:49:49 (292457): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-09-23 05:49:51 (292457): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-09-23 05:49:51 (292457): Guest Log: 2.6.3.0 1668 0 30196 137545 3 1 3117302 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-09-23 05:49:54 (292457): Guest Log: copied the webapp to /var/www
2024-09-23 05:49:54 (292457): Guest Log: ATHENA_PROC_NUMBER=8
2024-09-23 05:49:54 (292457): Guest Log: ATHENA_CORE_NUMBER=8
2024-09-23 05:49:55 (292457): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-09-23 05:49:55 (292457): Guest Log:  *** Starting ATLAS job. (PandaID=6341048238 taskID=41078631) ***
2024-09-23 07:26:03 (292457): Status Report: Elapsed Time: '6000.000000'
2024-09-23 07:26:03 (292457): Status Report: CPU Time: '1250.630000'
2024-09-23 09:05:04 (292457): Status Report: Elapsed Time: '12000.000000'
2024-09-23 09:05:04 (292457): Status Report: CPU Time: '3518.380000'
2024-09-23 10:44:04 (292457): Status Report: Elapsed Time: '18000.000000'
2024-09-23 10:44:04 (292457): Status Report: CPU Time: '5784.110000'
2024-09-23 12:23:04 (292457): Status Report: Elapsed Time: '24000.000000'
2024-09-23 12:23:04 (292457): Status Report: CPU Time: '8055.890000'
2024-09-23 14:02:05 (292457): Status Report: Elapsed Time: '30000.000000'
2024-09-23 14:02:05 (292457): Status Report: CPU Time: '10328.100000'
2024-09-23 15:41:05 (292457): Status Report: Elapsed Time: '36000.000000'
2024-09-23 15:41:05 (292457): Status Report: CPU Time: '12603.440000'
2024-09-23 17:20:05 (292457): Status Report: Elapsed Time: '42000.000000'
2024-09-23 17:20:05 (292457): Status Report: CPU Time: '14876.990000'
2024-09-23 18:59:06 (292457): Status Report: Elapsed Time: '48000.000000'
2024-09-23 18:59:06 (292457): Status Report: CPU Time: '17155.030000'
2024-09-23 19:50:58 (292457): Guest Log:  *** Job finished ***
2024-09-23 19:50:58 (292457): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:45,335 | INFO     | [job] control thread has finished
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:45,779 | INFO     | [job] queue monitor thread has finished
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:48,867 | INFO     | [data] queue_monitor thread has finished
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:49,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555423790912)>', '<ExcThread(monitor, started 140554482480896)>']
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:49,990 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:49,990 | INFO     | [monitor] control thread has ended
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:54,166 | INFO     | all workflow threads have been joined
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:54,166 | INFO     | end of generic workflow (traces error code: 0)
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:54,166 | INFO     | traces error code: 0
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:54,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:55,824 [wrapper] ==== pilot stdout END ====
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:55,828 [wrapper] ==== wrapper stdout RESUME ====
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:55,928 [wrapper] pilotpid: 6037
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:55,932 [wrapper] Pilot exit status: 0
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:56,062 [wrapper] pandaids: 6341048238
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:56,342 [wrapper] cleanup supervisor_pilot  6541 6038
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:56,346 [wrapper] Test setup, not cleaning
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:56,350 [wrapper] ==== wrapper stdout END ====
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:56,353 [wrapper] ==== wrapper stderr END ====
2024-09-23 19:50:58 (292457): Guest Log: 2024-09-23 17:50:56,447 [wrapper] apfmon messages muted
2024-09-23 19:50:58 (292457): Guest Log:  *** Error codes and diagnostics ***
2024-09-23 19:50:58 (292457): Guest Log:     "exeErrorCode": 0,
2024-09-23 19:50:58 (292457): Guest Log:     "exeErrorDiag": "",
2024-09-23 19:50:58 (292457): Guest Log:     "pilotErrorCode": 0,
2024-09-23 19:50:58 (292457): Guest Log:     "pilotErrorDiag": "",
2024-09-23 19:50:58 (292457): Guest Log:  *** Listing of results directory ***
2024-09-23 19:50:58 (292457): Guest Log: total 168156
2024-09-23 19:50:58 (292457): Guest Log: -rw-r--r--. 1 atlas atlas    482533 Sep 22 00:50 pilot3.tar.gz
2024-09-23 19:50:58 (292457): Guest Log: -rw-r--r--. 1 atlas atlas      5655 Sep 22 00:53 queuedata.json
2024-09-23 19:50:58 (292457): Guest Log: -rwx------. 1 atlas atlas     33679 Sep 22 00:53 runpilot2-wrapper.sh
2024-09-23 19:50:58 (292457): Guest Log: -rw-r--r--. 1 atlas atlas    495964 Sep 23 03:49 input.tar.gz
2024-09-23 19:50:58 (292457): Guest Log: -rw-r--r--. 1 atlas atlas     17539 Sep 23 03:49 start_atlas.sh
2024-09-23 19:50:58 (292457): Guest Log: -rw-r--r--. 1 atlas atlas      6903 Sep 23 03:49 init_data.xml
2024-09-23 19:50:58 (292457): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Sep 23 03:49 EVNT.41078629._000031.pool.root.1 -> /data/./ATLAS.root_0
2024-09-23 19:50:58 (292457): Guest Log: -rw-r--r--. 1 atlas atlas      2551 Sep 23 03:49 pandaJob.out
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas       424 Sep 23 03:50 setup.sh.local
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas   1009931 Sep 23 03:51 agis_schedconf.cvmfs.json
2024-09-23 19:50:58 (292457): Guest Log: drwx------. 4 atlas atlas      4096 Sep 23 03:52 pilot3
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas 162548241 Sep 23 17:44 HITS.41078631._012963.pool.root.1
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas      1028 Sep 23 17:49 memory_monitor_summary.json
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas   1618603 Sep 23 17:49 agis_ddmendpoints.agis.ALL.json
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas    514410 Sep 23 17:49 log.41078631._012963.job.log.tgz.1
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas        95 Sep 23 17:50 pilot_heartbeat.json
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas      7743 Sep 23 17:50 heartbeat.json
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas      4275 Sep 23 17:50 pilotlog.txt
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas   2416288 Sep 23 17:50 log.41078631._012963.job.log.1
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas       357 Sep 23 17:50 output.list
2024-09-23 19:50:58 (292457): Guest Log: -rw-r--r--. 1 atlas atlas       620 Sep 23 17:50 runtime_log
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas   2949120 Sep 23 17:50 result.tar.gz
2024-09-23 19:50:58 (292457): Guest Log: -rw-r--r--. 1 atlas atlas     10929 Sep 23 17:50 runtime_log.err
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas       649 Sep 23 17:50 KUDODmW2PC6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDm51dKDmA9ESIn.diag
2024-09-23 19:50:58 (292457): Guest Log: Looking for outputfile HITS.41078631._012963.pool.root.1
2024-09-23 19:50:58 (292457): Guest Log: HITS file was successfully produced
2024-09-23 19:50:58 (292457): Guest Log: -rw-------. 1 atlas atlas 162548241 Sep 23 17:44 /home/atlas/RunAtlas/HITS.41078631._012963.pool.root.1
2024-09-23 19:50:59 (292457): Guest Log: Successfully finished the ATLAS job!
2024-09-23 19:50:59 (292457): Guest Log: Copying the results back to the shared directory!
2024-09-23 19:51:00 (292457): Guest Log:  *** Contents of shared directory: ***
2024-09-23 19:51:00 (292457): Guest Log: total 434104
2024-09-23 19:51:00 (292457): Guest Log: -rw-r--r--. 1 root root 441043336 Sep 23 03:47 ATLAS.root_0
2024-09-23 19:51:00 (292457): Guest Log: -rw-r--r--. 1 root root      6903 Sep 23 03:47 init_data.xml
2024-09-23 19:51:00 (292457): Guest Log: -rw-r--r--. 1 root root    495964 Sep 23 03:47 input.tar.gz
2024-09-23 19:51:00 (292457): Guest Log: -rw-r--r--. 1 root root   2949120 Sep 23 17:50 result.tar.gz
2024-09-23 19:51:00 (292457): Guest Log: -rw-r--r--. 1 root root     17539 Sep 23 03:47 start_atlas.sh
2024-09-23 19:51:00 (292457): Guest Log:  *** Success! Shutting down the machine. ***
2024-09-23 19:51:00 (292457): VM Completion File Detected.
2024-09-23 19:51:00 (292457): Powering off VM.
2024-09-23 19:51:01 (292457): Successfully stopped VM.
2024-09-23 19:51:01 (292457): Deregistering VM. (boinc_b057a13499216a88, slot#12)
2024-09-23 19:51:01 (292457): Removing network bandwidth throttle group from VM.
2024-09-23 19:51:01 (292457): Removing VM from VirtualBox.
19:51:06 (292457): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN