Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
01:44:00 (1985817): wrapper (7.7.26015): starting
01:44:00 (1985817): wrapper: running run_atlas (--nthreads 4)
[2024-09-22 01:44:00] Arguments: --nthreads 4
[2024-09-22 01:44:00] Threads: 4
[2024-09-22 01:44:00] Checking for CVMFS
[2024-09-22 01:44:00] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-22 01:44:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-22 01:44:00] Running cvmfs_config stat atlas.cern.ch
[2024-09-22 01:44:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-22 01:44:00] 2.11.4.0 57416 1787 65184 137504 2 187 6098480 6144000 1830 130560 0 7082074 99.998 376796 2450 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-09-22 01:44:00] CVMFS is ok
[2024-09-22 01:44:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-22 01:44:00] Checking for apptainer binary...
[2024-09-22 01:44:00] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-22 01:44:00] Running /usr/bin/apptainer --version
[2024-09-22 01:44:00] apptainer version 1.3.3
[2024-09-22 01:44:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-22 01:44:01] Ryzen8
[2024-09-22 01:44:01] apptainer works
[2024-09-22 01:44:01] Set ATHENA_PROC_NUMBER=4
[2024-09-22 01:44:01] Set ATHENA_CORE_NUMBER=4
[2024-09-22 01:44:01] Starting ATLAS job with PandaID=6340924576
[2024-09-22 01:44:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-22 02:47:01]  *** The last 200 lines of the pilot log: ***
[2024-09-22 02:47:01]  domain=
[2024-09-22 02:47:01]  filesize=221539
[2024-09-22 02:47:01]  filetype=log
[2024-09-22 02:47:01]  guid=bd385b0a-ab90-4f8f-b491-073fcd27801c
[2024-09-22 02:47:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-22 02:47:01]  is_tar=False
[2024-09-22 02:47:01]  lfn=log.41078623._022040.job.log.tgz.1
[2024-09-22 02:47:01]  mtime=0
[2024-09-22 02:47:01]  protocol_id=None
[2024-09-22 02:47:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-22 02:47:01]  replicas=None
[2024-09-22 02:47:01]  scope=mc23_13p6TeV
[2024-09-22 02:47:01]  status=None
[2024-09-22 02:47:01]  status_code=0
[2024-09-22 02:47:01]  storage_token=
[2024-09-22 02:47:01]  surl=/var/lib/boinc2/slots/0/PanDA_Pilot-6340924576/log.41078623._022040.job.log.tgz.1
[2024-09-22 02:47:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/fa/log.41078623._022040.job.log.tgz.1
[2024-09-22 02:47:01]  workdir=None
[2024-09-22 02:47:01] ]
[2024-09-22 02:47:01] 2024-09-22 00:46:37,440 | INFO     | transferring file log.41078623._022040.job.log.tgz.1 from /var/lib/boinc2/slots/0/PanDA_Pilot-6340924576/log.41078623._022040.job.log.tgz.1 to /var/lib/boinc2/slot
[2024-09-22 02:47:01] 2024-09-22 00:46:37,440 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc2/slots/0/PanDA_Pilot-6340924576/log.41078623._022040.job.log.tgz.1 /var/lib/boinc2/slots/0/log.41078623._022040.j
[2024-09-22 02:47:01] 2024-09-22 00:46:37,451 | INFO     | adding to output.list: log.41078623._022040.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/fa/log.41078623._022040.job.log.tg
[2024-09-22 02:47:01] 2024-09-22 00:46:37,451 | INFO     | summary of transferred files:
[2024-09-22 02:47:01] 2024-09-22 00:46:37,451 | INFO     |  -- lfn=log.41078623._022040.job.log.tgz.1, status_code=0, status=transferred
[2024-09-22 02:47:01] 2024-09-22 00:46:37,452 | INFO     | stage-out finished correctly
[2024-09-22 02:47:01] 2024-09-22 00:46:37,907 | INFO     | monitor loop #299: job 0:6340924576 is in state 'finished'
[2024-09-22 02:47:01] 2024-09-22 00:46:37,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 02:47:01] 2024-09-22 00:46:39,824 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-22 02:47:01] 2024-09-22 00:46:40,408 | INFO     | monitor loop #300: job 0:6340924576 is in state 'finished'
[2024-09-22 02:47:01] 2024-09-22 00:46:40,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 02:47:01] 2024-09-22 00:46:41,063 | INFO     | job 6340924576 has state=finished
[2024-09-22 02:47:01] 2024-09-22 00:46:41,063 | INFO     | preparing for final server update for job 6340924576 in state='finished'
[2024-09-22 02:47:01] 2024-09-22 00:46:41,063 | INFO     | this job has now completed (state=finished)
[2024-09-22 02:47:01] 2024-09-22 00:46:41,063 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-22 02:47:01] 2024-09-22 00:46:41,063 | INFO     | log transfer has been attempted: DONE
[2024-09-22 02:47:01] 2024-09-22 00:46:41,063 | INFO     | job 6340924576 has finished - writing final server update
[2024-09-22 02:47:01] 2024-09-22 00:46:41,063 | INFO     | total number of processed events: 400 (read)
[2024-09-22 02:47:01] 2024-09-22 00:46:41,064 | INFO     | executing command: lscpu
[2024-09-22 02:47:01] 2024-09-22 00:46:41,077 | INFO     | found 6 cores (6 cores per socket, 1 sockets)
[2024-09-22 02:47:01] 2024-09-22 00:46:41,077 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-22 02:47:01] 2024-09-22 00:46:41,094 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-22 02:47:01] 2024-09-22 00:46:42,738 | INFO     | CPU arch script returned: x86-64-v4
[2024-09-22 02:47:01] 2024-09-22 00:46:42,738 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6340924576/memory_monitor_summary.json (trf name=prmon)
[2024-09-22 02:47:01] 2024-09-22 00:46:42,739 | INFO     | extracted standard info from prmon json
[2024-09-22 02:47:01] 2024-09-22 00:46:42,739 | INFO     | extracted standard memory fields from prmon json
[2024-09-22 02:47:01] 2024-09-22 00:46:42,739 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-22 02:47:01] 2024-09-22 00:46:42,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-22 02:47:01] 2024-09-22 00:46:42,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-22 02:47:01] 2024-09-22 00:46:42,740 | INFO     | fitting pss+swap vs Time
[2024-09-22 02:47:01] 2024-09-22 00:46:42,740 | INFO     | model: linear, x: [1726962570.0, 1726962631.0, 1726962692.0, 1726962753.0, 1726962814.0, 1726962875.0, 1726962936.0, 1726962997.0, 1726963058.0, 1726963119.0, 1726
[2024-09-22 02:47:01] 2024-09-22 00:46:42,740 | INFO     | sum of square deviations: 51573060.0
[2024-09-22 02:47:01] 2024-09-22 00:46:42,740 | INFO     | sum of deviations: -4156632964.0000005
[2024-09-22 02:47:01] 2024-09-22 00:46:42,740 | INFO     | mean x: 1726964217.0
[2024-09-22 02:47:01] 2024-09-22 00:46:42,740 | INFO     | mean y: 2449303.9454545453
[2024-09-22 02:47:01] 2024-09-22 00:46:42,740 | INFO     | -- intersect: 139190552395.57217
[2024-09-22 02:47:01] 2024-09-22 00:46:42,740 | INFO     | intersect: 139190552395.57217
[2024-09-22 02:47:01] 2024-09-22 00:46:42,740 | INFO     | chi2: 0.024572033732270633
[2024-09-22 02:47:01] 2024-09-22 00:46:42,740 | INFO     | -- intersect: 139190552395.57217
[2024-09-22 02:47:01] 2024-09-22 00:46:42,740 | INFO     | current memory leak: -80.60 B/s (using 55 data points, chi2=0.02)
[2024-09-22 02:47:01] 2024-09-22 00:46:42,741 | INFO     | ..............................
[2024-09-22 02:47:01] 2024-09-22 00:46:42,741 | INFO     | . Timing measurements:
[2024-09-22 02:47:01] 2024-09-22 00:46:42,741 | INFO     | . get job = 0 s
[2024-09-22 02:47:01] 2024-09-22 00:46:42,741 | INFO     | . initial setup = 2 s
[2024-09-22 02:47:01] 2024-09-22 00:46:42,741 | INFO     | . payload setup = 2 s
[2024-09-22 02:47:01] 2024-09-22 00:46:42,741 | INFO     | . stage-in = 0 s
[2024-09-22 02:47:01] 2024-09-22 00:46:42,741 | INFO     | . payload execution = 3731 s
[2024-09-22 02:47:01] 2024-09-22 00:46:42,741 | INFO     | . stage-out = 0 s
[2024-09-22 02:47:01] 2024-09-22 00:46:42,741 | INFO     | . log creation = 0 s
[2024-09-22 02:47:01] 2024-09-22 00:46:42,741 | INFO     | ..............................
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | 
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | job summary report
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | --------------------------------------------------
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | PanDA job id: 6340924576
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | task id: 41078623
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | errors: (none)
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | pilot state: finished 
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | transexitcode: 0
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | exeerrorcode: 0
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | exeerrordiag: 
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | exitcode: 0
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | exitmsg: OK
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | cpuconsumptiontime: 13807 s
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | nevents: 400
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | neventsw: 0
[2024-09-22 02:47:01] 2024-09-22 00:46:42,789 | INFO     | pid: 1995852
[2024-09-22 02:47:01] 2024-09-22 00:46:42,790 | INFO     | pgrp: 1995852
[2024-09-22 02:47:01] 2024-09-22 00:46:42,790 | INFO     | corecount: 4
[2024-09-22 02:47:01] 2024-09-22 00:46:42,790 | INFO     | event service: False
[2024-09-22 02:47:01] 2024-09-22 00:46:42,790 | INFO     | sizes: {0: 2440217, 2: 2440423, 11: 2440451, 3737: 2475141, 3740: 2475141, 3743: 2475311}
[2024-09-22 02:47:01] 2024-09-22 00:46:42,790 | INFO     | --------------------------------------------------
[2024-09-22 02:47:01] 2024-09-22 00:46:42,790 | INFO     | 
[2024-09-22 02:47:01] 2024-09-22 00:46:42,790 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,801 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,802 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,802 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,802 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,802 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,802 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-22 02:47:01] 2024-09-22 00:46:42,802 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,802 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-22 02:47:01] 2024-09-22 00:46:42,802 | INFO     | job 6340924576 has completed (purged errors)
[2024-09-22 02:47:01] 2024-09-22 00:46:42,802 | INFO     | overall cleanup function is called
[2024-09-22 02:47:01] 2024-09-22 00:46:43,806 | INFO     | --- collectZombieJob: --- 10, [1995852]
[2024-09-22 02:47:01] 2024-09-22 00:46:43,806 | INFO     | zombie collector waiting for pid 1995852
[2024-09-22 02:47:01] 2024-09-22 00:46:43,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-22 02:47:01] 2024-09-22 00:46:43,806 | INFO     | collected zombie processes
[2024-09-22 02:47:01] 2024-09-22 00:46:43,806 | INFO     | will  attempt to kill all subprocesses of pid=1995852
[2024-09-22 02:47:01] 2024-09-22 00:46:43,845 | INFO     | process IDs to be killed: [1995852] (in reverse order)
[2024-09-22 02:47:01] 2024-09-22 00:46:43,870 | WARNING  | found no corresponding commands to process id(s)
[2024-09-22 02:47:01] 2024-09-22 00:46:43,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-22 02:47:01] 2024-09-22 00:46:43,872 | INFO     | did not find any defunct processes belonging to 1995852
[2024-09-22 02:47:01] 2024-09-22 00:46:43,873 | INFO     | did not find any defunct processes belonging to 1995852
[2024-09-22 02:47:01] 2024-09-22 00:46:43,874 | INFO     | ready for new job
[2024-09-22 02:47:01] 2024-09-22 00:46:43,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-22 02:47:01] 2024-09-22 00:46:43,874 | INFO     | **************************************
[2024-09-22 02:47:01] 2024-09-22 00:46:43,875 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-22 02:47:01] 2024-09-22 00:46:43,875 | INFO     | **************************************
[2024-09-22 02:47:01] 2024-09-22 00:46:43,875 | INFO     | 
[2024-09-22 02:47:01] 2024-09-22 00:46:43,875 | INFO     | architecture information:
[2024-09-22 02:47:01] 2024-09-22 00:46:43,875 | INFO     | executing command: cat /etc/os-release
[2024-09-22 02:47:01] 2024-09-22 00:46:43,886 | INFO     | cat /etc/os-release:
[2024-09-22 02:47:01] NAME="CentOS Linux"
[2024-09-22 02:47:01] VERSION="7 (Core)"
[2024-09-22 02:47:01] ID="centos"
[2024-09-22 02:47:01] ID_LIKE="rhel fedora"
[2024-09-22 02:47:01] VERSION_ID="7"
[2024-09-22 02:47:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-22 02:47:01] ANSI_COLOR="0;31"
[2024-09-22 02:47:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-22 02:47:01] HOME_URL="https://www.centos.org/"
[2024-09-22 02:47:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-22 02:47:01] 
[2024-09-22 02:47:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-22 02:47:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-22 02:47:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-22 02:47:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-22 02:47:01] 
[2024-09-22 02:47:01] 2024-09-22 00:46:43,886 | INFO     | **************************************
[2024-09-22 02:47:01] 2024-09-22 00:46:44,389 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2024-09-22 02:47:01] 2024-09-22 00:46:44,399 | INFO     | sufficient remaining disk space (96557072384 B)
[2024-09-22 02:47:01] 2024-09-22 00:46:44,399 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-22 02:47:01] 2024-09-22 00:46:44,399 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-22 02:47:01] 2024-09-22 00:46:44,399 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-22 02:47:01] 2024-09-22 00:46:44,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-22 02:47:01] 2024-09-22 00:46:44,399 | INFO     | aborting loop
[2024-09-22 02:47:01] 2024-09-22 00:46:44,534 | INFO     | found 0 job(s) in 20 queues
[2024-09-22 02:47:01] 2024-09-22 00:46:44,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-22 02:47:01] 2024-09-22 00:46:44,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-22 02:47:01] 2024-09-22 00:46:44,865 | INFO     | all payload control threads have been joined
[2024-09-22 02:47:01] 2024-09-22 00:46:44,905 | INFO     | all data control threads have been joined
[2024-09-22 02:47:01] 2024-09-22 00:46:45,404 | INFO     | [job] retrieve thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:45,404 | INFO     | [job] queue monitor thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:45,404 | INFO     | [job] job monitor thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:45,506 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-22 02:47:01] 2024-09-22 00:46:45,544 | INFO     | [payload] failed_post thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:45,786 | INFO     | all job control threads have been joined
[2024-09-22 02:47:01] 2024-09-22 00:46:45,870 | INFO     | [payload] control thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:45,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-22 02:47:01] 2024-09-22 00:46:45,909 | INFO     | [data] control thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:46,037 | INFO     | [job] validate thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:46,089 | INFO     | [job] create_data_payload thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:46,101 | INFO     | [payload] validate_post thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:46,239 | INFO     | [payload] validate_pre thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:46,659 | INFO     | [data] copytool_in thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:46,788 | INFO     | [job] control thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:46,799 | INFO     | [payload] execute_payloads thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:47,509 | INFO     | [data] copytool_out thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:49,879 | INFO     | [data] queue_monitor thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:54,717 | INFO     | job.realtimelogging is not enabled
[2024-09-22 02:47:01] 2024-09-22 00:46:55,722 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-22 02:47:01] 2024-09-22 00:46:56,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678340523840)>', '<ExcThread(monitor, started 140677979543296)>']
[2024-09-22 02:47:01] 2024-09-22 00:46:57,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-22 02:47:01] 2024-09-22 00:46:57,588 | INFO     | [monitor] control thread has ended
[2024-09-22 02:47:01] 2024-09-22 00:47:01,706 | INFO     | all workflow threads have been joined
[2024-09-22 02:47:01] 2024-09-22 00:47:01,706 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-22 02:47:01] 2024-09-22 00:47:01,706 | INFO     | traces error code: 0
[2024-09-22 02:47:01] 2024-09-22 00:47:01,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-22 02:47:01] 2024-09-22 00:47:01,765 [wrapper] ==== pilot stdout END ====
[2024-09-22 02:47:01] 2024-09-22 00:47:01,767 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-22 02:47:01] 2024-09-22 00:47:01,768 [wrapper] pilotpid: 1989452
[2024-09-22 02:47:01] 2024-09-22 00:47:01,769 [wrapper] Pilot exit status: 0
[2024-09-22 02:47:01] 2024-09-22 00:47:01,778 [wrapper] pandaids: 6340924576
[2024-09-22 02:47:01] 2024-09-22 00:47:01,794 [wrapper] cleanup supervisor_pilot 2053024 1989453
[2024-09-22 02:47:01] 2024-09-22 00:47:01,795 [wrapper] Test setup, not cleaning
[2024-09-22 02:47:01] 2024-09-22 00:47:01,796 [wrapper] ==== wrapper stdout END ====
[2024-09-22 02:47:01] 2024-09-22 00:47:01,798 [wrapper] ==== wrapper stderr END ====
[2024-09-22 02:47:01] 2024-09-22 00:47:01,800 [wrapper] apfmon messages muted
[2024-09-22 02:47:01]  *** Error codes and diagnostics ***
[2024-09-22 02:47:01]     "exeErrorCode": 0,
[2024-09-22 02:47:01]     "exeErrorDiag": "",
[2024-09-22 02:47:01]     "pilotErrorCode": 0,
[2024-09-22 02:47:01]     "pilotErrorDiag": "",
[2024-09-22 02:47:01]  *** Listing of results directory ***
[2024-09-22 02:47:01] insgesamt 594356
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc      5655 21. Sep 08:40 queuedata.json
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc    482533 21. Sep 08:41 pilot3.tar.gz
[2024-09-22 02:47:01] -rwx------ 1 boinc boinc     33679 21. Sep 08:42 runpilot2-wrapper.sh
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc       100 22. Sep 01:44 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-22 02:47:01] -rwxr-xr-x 1 boinc boinc      7986 22. Sep 01:44 run_atlas
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc       105 22. Sep 01:44 job.xml
[2024-09-22 02:47:01] -rw-r--r-- 2 boinc boinc     17539 22. Sep 01:44 start_atlas.sh
[2024-09-22 02:47:01] drwxrwx--x 2 boinc boinc      4096 22. Sep 01:44 shared
[2024-09-22 02:47:01] -rw-r--r-- 2 boinc boinc    495966 22. Sep 01:44 input.tar.gz
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc      7134 22. Sep 01:44 init_data.xml
[2024-09-22 02:47:01] -rw-r--r-- 2 boinc boinc 440173960 22. Sep 01:44 EVNT.41078621._000803.pool.root.1
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc         0 22. Sep 01:44 boinc_lockfile
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc      2562 22. Sep 01:44 pandaJob.out
[2024-09-22 02:47:01] -rw------- 1 boinc boinc       461 22. Sep 01:44 setup.sh.local
[2024-09-22 02:47:01] -rw------- 1 boinc boinc   1009470 22. Sep 01:44 agis_schedconf.cvmfs.json
[2024-09-22 02:47:01] -rw------- 1 boinc boinc   1618603 22. Sep 01:44 agis_ddmendpoints.agis.ALL.json
[2024-09-22 02:47:01] drwx------ 4 boinc boinc      4096 22. Sep 01:44 pilot3
[2024-09-22 02:47:01] -rw------- 1 boinc boinc        95 22. Sep 02:46 pilot_heartbeat.json
[2024-09-22 02:47:01] -rw------- 1 boinc boinc 163394669 22. Sep 02:46 HITS.41078623._022040.pool.root.1
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc       530 22. Sep 02:46 boinc_task_state.xml
[2024-09-22 02:47:01] -rw------- 1 boinc boinc      1027 22. Sep 02:46 memory_monitor_summary.json
[2024-09-22 02:47:01] -rw------- 1 boinc boinc    221539 22. Sep 02:46 log.41078623._022040.job.log.tgz.1
[2024-09-22 02:47:01] -rw------- 1 boinc boinc      7681 22. Sep 02:46 heartbeat.json
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc      8192 22. Sep 02:46 boinc_mmap_file
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc        27 22. Sep 02:46 wrapper_checkpoint.txt
[2024-09-22 02:47:01] -rw------- 1 boinc boinc      4288 22. Sep 02:47 pilotlog.txt
[2024-09-22 02:47:01] -rw------- 1 boinc boinc    377430 22. Sep 02:47 log.41078623._022040.job.log.1
[2024-09-22 02:47:01] -rw------- 1 boinc boinc       357 22. Sep 02:47 output.list
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc       620 22. Sep 02:47 runtime_log
[2024-09-22 02:47:01] -rw------- 1 boinc boinc    614400 22. Sep 02:47 result.tar.gz
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc     11350 22. Sep 02:47 runtime_log.err
[2024-09-22 02:47:01] -rw------- 1 boinc boinc       630 22. Sep 02:47 2IULDmc08B6n7OlckoGmwREmGgkVDo1bjSoqOlfODmwdmKDmdNgCfn.diag
[2024-09-22 02:47:01] -rw-r--r-- 1 boinc boinc     20844 22. Sep 02:47 stderr.txt
[2024-09-22 02:47:01] HITS file was successfully produced:
[2024-09-22 02:47:01] -rw------- 1 boinc boinc 163394669 22. Sep 02:46 shared/HITS.pool.root.1
[2024-09-22 02:47:01]  *** Contents of shared directory: ***
[2024-09-22 02:47:01] insgesamt 590544
[2024-09-22 02:47:01] -rw-r--r-- 2 boinc boinc     17539 22. Sep 01:44 start_atlas.sh
[2024-09-22 02:47:01] -rw-r--r-- 2 boinc boinc    495966 22. Sep 01:44 input.tar.gz
[2024-09-22 02:47:01] -rw-r--r-- 2 boinc boinc 440173960 22. Sep 01:44 ATLAS.root_0
[2024-09-22 02:47:01] -rw------- 1 boinc boinc 163394669 22. Sep 02:46 HITS.pool.root.1
[2024-09-22 02:47:01] -rw------- 1 boinc boinc    614400 22. Sep 02:47 result.tar.gz
02:47:03 (1985817): run_atlas exited; CPU time 13797.386864
02:47:03 (1985817): called boinc_finish(0)

</stderr_txt>
]]>

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