Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
23:31:30 (635699): wrapper (7.7.26015): starting
23:31:30 (635699): wrapper: running run_atlas (--nthreads 4)
[2024-09-21 23:31:30] Arguments: --nthreads 4
[2024-09-21 23:31:30] Threads: 4
[2024-09-21 23:31:30] Checking for CVMFS
[2024-09-21 23:31:30] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-21 23:31:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-21 23:31:30] Running cvmfs_config stat atlas.cern.ch
[2024-09-21 23:31:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-21 23:31:30] 2.11.4.0 12539 1490 57136 137501 3 56 2416438 4096000 909 130560 0 2397084 99.995 366330 3563 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-09-21 23:31:30] CVMFS is ok
[2024-09-21 23:31:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-21 23:31:30] Checking for apptainer binary...
[2024-09-21 23:31:30] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-21 23:31:30] Running /usr/bin/apptainer --version
[2024-09-21 23:31:30] apptainer version 1.3.3
[2024-09-21 23:31:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-21 23:31:30] TS-P310
[2024-09-21 23:31:30] apptainer works
[2024-09-21 23:31:31] Set ATHENA_PROC_NUMBER=4
[2024-09-21 23:31:31] Set ATHENA_CORE_NUMBER=4
[2024-09-21 23:31:31] Starting ATLAS job with PandaID=6340336601
[2024-09-21 23:31:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-22 01:12:21]  *** The last 200 lines of the pilot log: ***
[2024-09-22 01:12:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-22 01:12:21]  is_tar=False
[2024-09-22 01:12:21]  lfn=log.41078631._002564.job.log.tgz.1
[2024-09-22 01:12:21]  mtime=0
[2024-09-22 01:12:21]  protocol_id=None
[2024-09-22 01:12:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-22 01:12:21]  replicas=None
[2024-09-22 01:12:21]  scope=mc23_13p6TeV
[2024-09-22 01:12:21]  status=None
[2024-09-22 01:12:21]  status_code=0
[2024-09-22 01:12:21]  storage_token=
[2024-09-22 01:12:21]  surl=/var/lib/boinc2/slots/0/PanDA_Pilot-6340336601/log.41078631._002564.job.log.tgz.1
[2024-09-22 01:12:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/29/log.41078631._002564.job.log.tgz.1
[2024-09-22 01:12:21]  workdir=None
[2024-09-22 01:12:21] ]
[2024-09-22 01:12:21] 2024-09-21 23:11:56,852 | INFO     | transferring file log.41078631._002564.job.log.tgz.1 from /var/lib/boinc2/slots/0/PanDA_Pilot-6340336601/log.41078631._002564.job.log.tgz.1 to /var/lib/boinc2/slot
[2024-09-22 01:12:21] 2024-09-21 23:11:56,852 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc2/slots/0/PanDA_Pilot-6340336601/log.41078631._002564.job.log.tgz.1 /var/lib/boinc2/slots/0/log.41078631._002564.j
[2024-09-22 01:12:21] 2024-09-21 23:11:56,865 | INFO     | adding to output.list: log.41078631._002564.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/29/log.41078631._002564.job.log.tg
[2024-09-22 01:12:21] 2024-09-21 23:11:56,865 | INFO     | summary of transferred files:
[2024-09-22 01:12:21] 2024-09-21 23:11:56,865 | INFO     |  -- lfn=log.41078631._002564.job.log.tgz.1, status_code=0, status=transferred
[2024-09-22 01:12:21] 2024-09-21 23:11:56,866 | INFO     | stage-out finished correctly
[2024-09-22 01:12:21] 2024-09-21 23:11:58,139 | WARNING  | process 645704 is no longer using CPU - aborting
[2024-09-22 01:12:21] 2024-09-21 23:12:00,091 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-22 01:12:21] 2024-09-21 23:12:00,648 | INFO     | monitor loop #475: job 0:6340336601 is in state 'finished'
[2024-09-22 01:12:21] 2024-09-21 23:12:00,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 01:12:21] 2024-09-21 23:12:02,327 | INFO     | job 6340336601 has state=finished
[2024-09-22 01:12:21] 2024-09-21 23:12:02,327 | INFO     | preparing for final server update for job 6340336601 in state='finished'
[2024-09-22 01:12:21] 2024-09-21 23:12:02,327 | INFO     | this job has now completed (state=finished)
[2024-09-22 01:12:21] 2024-09-21 23:12:02,327 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-22 01:12:21] 2024-09-21 23:12:02,327 | INFO     | log transfer has been attempted: DONE
[2024-09-22 01:12:21] 2024-09-21 23:12:02,328 | INFO     | job 6340336601 has finished - writing final server update
[2024-09-22 01:12:21] 2024-09-21 23:12:02,328 | INFO     | total number of processed events: 400 (read)
[2024-09-22 01:12:21] 2024-09-21 23:12:02,329 | INFO     | executing command: lscpu
[2024-09-22 01:12:21] 2024-09-21 23:12:02,342 | INFO     | found 4 cores (4 cores per socket, 1 sockets)
[2024-09-22 01:12:21] 2024-09-21 23:12:02,343 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-22 01:12:21] 2024-09-21 23:12:02,361 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-22 01:12:21] 2024-09-21 23:12:03,149 | INFO     | monitor loop #476: job 0:6340336601 is in state 'finished'
[2024-09-22 01:12:21] 2024-09-21 23:12:03,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 01:12:21] 2024-09-21 23:12:05,651 | INFO     | monitor loop #477: job 0:6340336601 is in state 'finished'
[2024-09-22 01:12:21] 2024-09-21 23:12:05,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 01:12:21] 2024-09-21 23:12:06,078 | INFO     | CPU arch script returned: x86-64-v3
[2024-09-22 01:12:21] 2024-09-21 23:12:06,079 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6340336601/memory_monitor_summary.json (trf name=prmon)
[2024-09-22 01:12:21] 2024-09-21 23:12:06,079 | INFO     | extracted standard info from prmon json
[2024-09-22 01:12:21] 2024-09-21 23:12:06,079 | INFO     | extracted standard memory fields from prmon json
[2024-09-22 01:12:21] 2024-09-21 23:12:06,079 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-22 01:12:21] 2024-09-21 23:12:06,080 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-22 01:12:21] 2024-09-21 23:12:06,080 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-22 01:12:21] 2024-09-21 23:12:06,081 | INFO     | fitting pss+swap vs Time
[2024-09-22 01:12:21] 2024-09-21 23:12:06,081 | INFO     | model: linear, x: [1726954624.0, 1726954685.0, 1726954746.0, 1726954807.0, 1726954868.0, 1726954929.0, 1726954990.0, 1726955051.0, 1726955112.0, 1726955173.0, 1726
[2024-09-22 01:12:21] 2024-09-21 23:12:06,082 | INFO     | sum of square deviations: 241429643.0
[2024-09-22 01:12:21] 2024-09-21 23:12:06,082 | INFO     | sum of deviations: -11384850290.0
[2024-09-22 01:12:21] 2024-09-21 23:12:06,082 | INFO     | mean x: 1726957399.5
[2024-09-22 01:12:21] 2024-09-21 23:12:06,082 | INFO     | mean y: 2451066.5
[2024-09-22 01:12:21] 2024-09-21 23:12:06,082 | INFO     | -- intersect: 81438811598.72852
[2024-09-22 01:12:21] 2024-09-21 23:12:06,082 | INFO     | intersect: 81438811598.72852
[2024-09-22 01:12:21] 2024-09-21 23:12:06,082 | INFO     | chi2: 0.07641584556325294
[2024-09-22 01:12:21] 2024-09-21 23:12:06,082 | INFO     | -- intersect: 81438811598.72852
[2024-09-22 01:12:21] 2024-09-21 23:12:06,083 | INFO     | current memory leak: -47.16 B/s (using 92 data points, chi2=0.08)
[2024-09-22 01:12:21] 2024-09-21 23:12:06,083 | INFO     | ..............................
[2024-09-22 01:12:21] 2024-09-21 23:12:06,083 | INFO     | . Timing measurements:
[2024-09-22 01:12:21] 2024-09-21 23:12:06,083 | INFO     | . get job = 0 s
[2024-09-22 01:12:21] 2024-09-21 23:12:06,083 | INFO     | . initial setup = 2 s
[2024-09-22 01:12:21] 2024-09-21 23:12:06,083 | INFO     | . payload setup = 3 s
[2024-09-22 01:12:21] 2024-09-21 23:12:06,083 | INFO     | . stage-in = 0 s
[2024-09-22 01:12:21] 2024-09-21 23:12:06,083 | INFO     | . payload execution = 5996 s
[2024-09-22 01:12:21] 2024-09-21 23:12:06,083 | INFO     | . stage-out = 0 s
[2024-09-22 01:12:21] 2024-09-21 23:12:06,083 | INFO     | . log creation = 0 s
[2024-09-22 01:12:21] 2024-09-21 23:12:06,083 | INFO     | ..............................
[2024-09-22 01:12:21] 2024-09-21 23:12:06,150 | INFO     | 
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | job summary report
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | --------------------------------------------------
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | PanDA job id: 6340336601
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | task id: 41078631
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | errors: (none)
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | pilot state: finished 
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | transexitcode: 0
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | exeerrorcode: 0
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | exeerrordiag: 
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | exitcode: 0
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | exitmsg: OK
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | cpuconsumptiontime: 22332 s
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | nevents: 400
[2024-09-22 01:12:21] 2024-09-21 23:12:06,151 | INFO     | neventsw: 0
[2024-09-22 01:12:21] 2024-09-21 23:12:06,152 | INFO     | pid: 645704
[2024-09-22 01:12:21] 2024-09-21 23:12:06,152 | INFO     | pgrp: 645704
[2024-09-22 01:12:21] 2024-09-21 23:12:06,152 | INFO     | corecount: 4
[2024-09-22 01:12:21] 2024-09-21 23:12:06,152 | INFO     | event service: False
[2024-09-22 01:12:21] 2024-09-21 23:12:06,152 | INFO     | sizes: {0: 2440200, 3: 2440406, 11: 2440434, 6004: 2467233, 6005: 2476195, 6009: 2476251, 6015: 2476549}
[2024-09-22 01:12:21] 2024-09-21 23:12:06,152 | INFO     | --------------------------------------------------
[2024-09-22 01:12:21] 2024-09-21 23:12:06,152 | INFO     | 
[2024-09-22 01:12:21] 2024-09-21 23:12:06,152 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2024-09-22 01:12:21] 2024-09-21 23:12:06,165 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,165 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,165 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,165 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,166 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-22 01:12:21] 2024-09-21 23:12:06,167 | INFO     | job 6340336601 has completed (purged errors)
[2024-09-22 01:12:21] 2024-09-21 23:12:06,167 | INFO     | overall cleanup function is called
[2024-09-22 01:12:21] 2024-09-21 23:12:07,173 | INFO     | --- collectZombieJob: --- 10, [645704]
[2024-09-22 01:12:21] 2024-09-21 23:12:07,174 | INFO     | zombie collector waiting for pid 645704
[2024-09-22 01:12:21] 2024-09-21 23:12:07,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-22 01:12:21] 2024-09-21 23:12:07,174 | INFO     | collected zombie processes
[2024-09-22 01:12:21] 2024-09-21 23:12:07,174 | INFO     | will  attempt to kill all subprocesses of pid=645704
[2024-09-22 01:12:21] 2024-09-21 23:12:07,217 | INFO     | process IDs to be killed: [645704] (in reverse order)
[2024-09-22 01:12:21] 2024-09-21 23:12:07,245 | WARNING  | found no corresponding commands to process id(s)
[2024-09-22 01:12:21] 2024-09-21 23:12:07,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-22 01:12:21] 2024-09-21 23:12:07,248 | INFO     | did not find any defunct processes belonging to 645704
[2024-09-22 01:12:21] 2024-09-21 23:12:07,249 | INFO     | did not find any defunct processes belonging to 645704
[2024-09-22 01:12:21] 2024-09-21 23:12:07,249 | INFO     | ready for new job
[2024-09-22 01:12:21] 2024-09-21 23:12:07,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-22 01:12:21] 2024-09-21 23:12:07,251 | INFO     | **************************************
[2024-09-22 01:12:21] 2024-09-21 23:12:07,251 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-22 01:12:21] 2024-09-21 23:12:07,251 | INFO     | **************************************
[2024-09-22 01:12:21] 2024-09-21 23:12:07,251 | INFO     | 
[2024-09-22 01:12:21] 2024-09-21 23:12:07,251 | INFO     | architecture information:
[2024-09-22 01:12:21] 2024-09-21 23:12:07,252 | INFO     | executing command: cat /etc/os-release
[2024-09-22 01:12:21] 2024-09-21 23:12:07,261 | INFO     | cat /etc/os-release:
[2024-09-22 01:12:21] NAME="CentOS Linux"
[2024-09-22 01:12:21] VERSION="7 (Core)"
[2024-09-22 01:12:21] ID="centos"
[2024-09-22 01:12:21] ID_LIKE="rhel fedora"
[2024-09-22 01:12:21] VERSION_ID="7"
[2024-09-22 01:12:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-22 01:12:21] ANSI_COLOR="0;31"
[2024-09-22 01:12:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-22 01:12:21] HOME_URL="https://www.centos.org/"
[2024-09-22 01:12:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-22 01:12:21] 
[2024-09-22 01:12:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-22 01:12:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-22 01:12:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-22 01:12:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-22 01:12:21] 
[2024-09-22 01:12:21] 2024-09-21 23:12:07,261 | INFO     | **************************************
[2024-09-22 01:12:21] 2024-09-21 23:12:07,764 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2024-09-22 01:12:21] 2024-09-21 23:12:07,774 | INFO     | sufficient remaining disk space (64604864512 B)
[2024-09-22 01:12:21] 2024-09-21 23:12:07,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-22 01:12:21] 2024-09-21 23:12:07,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-22 01:12:21] 2024-09-21 23:12:07,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-22 01:12:21] 2024-09-21 23:12:07,775 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-22 01:12:21] 2024-09-21 23:12:07,818 | INFO     | found 0 job(s) in 20 queues
[2024-09-22 01:12:21] 2024-09-21 23:12:07,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-22 01:12:21] 2024-09-21 23:12:07,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-22 01:12:21] 2024-09-21 23:12:08,143 | INFO     | all job control threads have been joined
[2024-09-22 01:12:21] 2024-09-21 23:12:08,153 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-09-22 01:12:21] 2024-09-21 23:12:08,153 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-09-22 01:12:21] 2024-09-21 23:12:08,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-22 01:12:21] 2024-09-21 23:12:08,153 | INFO     | will abort loop
[2024-09-22 01:12:21] 2024-09-21 23:12:08,568 | INFO     | all data control threads have been joined
[2024-09-22 01:12:21] 2024-09-21 23:12:08,780 | INFO     | [job] retrieve thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:08,780 | INFO     | [job] queue monitor thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:08,822 | INFO     | [payload] failed_post thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:09,057 | INFO     | all payload control threads have been joined
[2024-09-22 01:12:21] 2024-09-21 23:12:09,132 | INFO     | [data] copytool_in thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:09,149 | INFO     | [job] control thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:09,158 | INFO     | [job] job monitor thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:09,401 | INFO     | [job] validate thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:09,408 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:09,431 | INFO     | [payload] validate_post thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:09,552 | INFO     | [job] create_data_payload thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:09,573 | INFO     | [data] control thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:09,657 | INFO     | [payload] validate_pre thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:09,781 | INFO     | [data] copytool_out thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:09,958 | INFO     | [payload] execute_payloads thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:10,062 | INFO     | [payload] control thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:10,667 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-22 01:12:21] 2024-09-21 23:12:14,673 | INFO     | [data] queue_monitor thread has finished
[2024-09-22 01:12:21] 2024-09-21 23:12:16,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794091554624)>', '<ExcThread(monitor, started 139793822357248)>']
[2024-09-22 01:12:21] 2024-09-21 23:12:16,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-22 01:12:21] 2024-09-21 23:12:16,861 | INFO     | [monitor] control thread has ended
[2024-09-22 01:12:21] 2024-09-21 23:12:21,289 | INFO     | all workflow threads have been joined
[2024-09-22 01:12:21] 2024-09-21 23:12:21,289 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-22 01:12:21] 2024-09-21 23:12:21,289 | INFO     | traces error code: 0
[2024-09-22 01:12:21] 2024-09-21 23:12:21,289 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-22 01:12:21] 2024-09-21 23:12:21,364 [wrapper] ==== pilot stdout END ====
[2024-09-22 01:12:21] 2024-09-21 23:12:21,366 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-22 01:12:21] 2024-09-21 23:12:21,367 [wrapper] pilotpid: 639328
[2024-09-22 01:12:21] 2024-09-21 23:12:21,369 [wrapper] Pilot exit status: 0
[2024-09-22 01:12:21] 2024-09-21 23:12:21,375 [wrapper] pandaids: 6340336601
[2024-09-22 01:12:21] 2024-09-21 23:12:21,393 [wrapper] cleanup supervisor_pilot  684439 639329
[2024-09-22 01:12:21] 2024-09-21 23:12:21,395 [wrapper] Test setup, not cleaning
[2024-09-22 01:12:21] 2024-09-21 23:12:21,397 [wrapper] ==== wrapper stdout END ====
[2024-09-22 01:12:21] 2024-09-21 23:12:21,399 [wrapper] ==== wrapper stderr END ====
[2024-09-22 01:12:21] 2024-09-21 23:12:21,402 [wrapper] apfmon messages muted
[2024-09-22 01:12:21]  *** Error codes and diagnostics ***
[2024-09-22 01:12:21]     "exeErrorCode": 0,
[2024-09-22 01:12:21]     "exeErrorDiag": "",
[2024-09-22 01:12:21]     "pilotErrorCode": 0,
[2024-09-22 01:12:21]     "pilotErrorDiag": "",
[2024-09-22 01:12:21]  *** Listing of results directory ***
[2024-09-22 01:12:21] insgesamt 593716
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc    482533 21. Sep 07:44 pilot3.tar.gz
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc      5655 21. Sep 07:56 queuedata.json
[2024-09-22 01:12:21] -rwx------ 1 boinc boinc     33679 21. Sep 07:59 runpilot2-wrapper.sh
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc       100 21. Sep 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-22 01:12:21] -rwxr-xr-x 1 boinc boinc      7986 21. Sep 23:31 run_atlas
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc       105 21. Sep 23:31 job.xml
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc      6704 21. Sep 23:31 init_data.xml
[2024-09-22 01:12:21] -rw-r--r-- 2 boinc boinc 439251232 21. Sep 23:31 EVNT.41078629._000103.pool.root.1
[2024-09-22 01:12:21] drwxrwx--x 2 boinc boinc      4096 21. Sep 23:31 shared
[2024-09-22 01:12:21] -rw-r--r-- 2 boinc boinc    495959 21. Sep 23:31 input.tar.gz
[2024-09-22 01:12:21] -rw-r--r-- 2 boinc boinc     17539 21. Sep 23:31 start_atlas.sh
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc         0 21. Sep 23:31 boinc_lockfile
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc      2550 21. Sep 23:31 pandaJob.out
[2024-09-22 01:12:21] -rw------- 1 boinc boinc       461 21. Sep 23:31 setup.sh.local
[2024-09-22 01:12:21] -rw------- 1 boinc boinc   1009486 21. Sep 23:31 agis_schedconf.cvmfs.json
[2024-09-22 01:12:21] -rw------- 1 boinc boinc   1618603 21. Sep 23:31 agis_ddmendpoints.agis.ALL.json
[2024-09-22 01:12:21] drwx------ 4 boinc boinc      4096 21. Sep 23:31 pilot3
[2024-09-22 01:12:21] -rw------- 1 boinc boinc 163252069 22. Sep 01:11 HITS.41078631._002564.pool.root.1
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc       530 22. Sep 01:11 boinc_task_state.xml
[2024-09-22 01:12:21] -rw------- 1 boinc boinc        95 22. Sep 01:11 pilot_heartbeat.json
[2024-09-22 01:12:21] -rw------- 1 boinc boinc      1022 22. Sep 01:11 memory_monitor_summary.json
[2024-09-22 01:12:21] -rw------- 1 boinc boinc    237815 22. Sep 01:11 log.41078631._002564.job.log.tgz.1
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc      8192 22. Sep 01:12 boinc_mmap_file
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc        27 22. Sep 01:12 wrapper_checkpoint.txt
[2024-09-22 01:12:21] -rw------- 1 boinc boinc      7665 22. Sep 01:12 heartbeat.json
[2024-09-22 01:12:21] -rw------- 1 boinc boinc      4402 22. Sep 01:12 pilotlog.txt
[2024-09-22 01:12:21] -rw------- 1 boinc boinc    567149 22. Sep 01:12 log.41078631._002564.job.log.1
[2024-09-22 01:12:21] -rw------- 1 boinc boinc       357 22. Sep 01:12 output.list
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc       620 22. Sep 01:12 runtime_log
[2024-09-22 01:12:21] -rw------- 1 boinc boinc    819200 22. Sep 01:12 result.tar.gz
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc     11355 22. Sep 01:12 runtime_log.err
[2024-09-22 01:12:21] -rw------- 1 boinc boinc       634 22. Sep 01:12 0YNKDmFK8B6n7OlckoGmwREmGgkVDo1bjSoqOlfODmjbmKDmu6W9nm.diag
[2024-09-22 01:12:21] -rw-r--r-- 1 boinc boinc     21159 22. Sep 01:12 stderr.txt
[2024-09-22 01:12:21] HITS file was successfully produced:
[2024-09-22 01:12:21] -rw------- 1 boinc boinc 163252069 22. Sep 01:11 shared/HITS.pool.root.1
[2024-09-22 01:12:21]  *** Contents of shared directory: ***
[2024-09-22 01:12:21] insgesamt 589704
[2024-09-22 01:12:21] -rw-r--r-- 2 boinc boinc 439251232 21. Sep 23:31 ATLAS.root_0
[2024-09-22 01:12:21] -rw-r--r-- 2 boinc boinc    495959 21. Sep 23:31 input.tar.gz
[2024-09-22 01:12:21] -rw-r--r-- 2 boinc boinc     17539 21. Sep 23:31 start_atlas.sh
[2024-09-22 01:12:21] -rw------- 1 boinc boinc 163252069 22. Sep 01:11 HITS.pool.root.1
[2024-09-22 01:12:21] -rw------- 1 boinc boinc    819200 22. Sep 01:12 result.tar.gz
01:12:22 (635699): run_atlas exited; CPU time 22324.105753
01:12:22 (635699): called boinc_finish(0)

</stderr_txt>
]]>

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