Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:22:12 (73253): wrapper (7.7.26015): starting
20:22:12 (73253): wrapper: running run_atlas (--nthreads 8)
[2024-09-20 20:22:12] Arguments: --nthreads 8
[2024-09-20 20:22:12] Threads: 8
[2024-09-20 20:22:12] Checking for CVMFS
[2024-09-20 20:22:13] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-20 20:22:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-20 20:22:14] Running cvmfs_config stat atlas.cern.ch
[2024-09-20 20:22:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-20 20:22:15] 2.11.2.0 47882 513 100480 137470 3 218 15514628 18432001 27655 130560 0 5048947 98.637 14675821 60253 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-09-20 20:22:15] CVMFS is ok
[2024-09-20 20:22:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-20 20:22:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-20 20:22:15] Further information can be found at the LHC@home message board.
[2024-09-20 20:22:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-20 20:22:15] Checking for apptainer binary...
[2024-09-20 20:22:15] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-20 20:22:15] Running /usr/bin/apptainer --version
[2024-09-20 20:22:15] apptainer version 1.3.2-1.el7
[2024-09-20 20:22:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-20 20:22:22] c-212-20.aglt2.org
[2024-09-20 20:22:22] apptainer works
[2024-09-20 20:22:22] Set ATHENA_PROC_NUMBER=8
[2024-09-20 20:22:22] Set ATHENA_CORE_NUMBER=8
[2024-09-20 20:22:22] Starting ATLAS job with PandaID=6340408928
[2024-09-20 20:22:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-20 23:11:13]  *** The last 200 lines of the pilot log: ***
[2024-09-20 23:11:13] 2024-09-21 03:10:56,628 | INFO     | chi2: 7.1957071558785115
[2024-09-20 23:11:13] 2024-09-21 03:10:56,629 | INFO     | current chi2=7.1957071558785115 (change=0.19255430729199022 %)
[2024-09-20 23:11:13] 2024-09-21 03:10:56,629 | INFO     | right removable region: 155
[2024-09-20 23:11:13] 2024-09-21 03:10:56,629 | INFO     | model: linear, x: [1726878705.0, 1726878766.0, 1726878827.0, 1726878888.0, 1726878949.0, 1726879010.0, 1726879071.0, 1726879132.0, 1726879193.0, 1726879254.0, 1726
[2024-09-20 23:11:13] 2024-09-21 03:10:56,629 | INFO     | sum of square deviations: 1177170744.8974338
[2024-09-20 23:11:13] 2024-09-21 03:10:56,630 | INFO     | sum of deviations: 69806043603.3205
[2024-09-20 23:11:13] 2024-09-21 03:10:56,630 | INFO     | mean x: 1726883432.525641
[2024-09-20 23:11:13] 2024-09-21 03:10:56,630 | INFO     | mean y: 2406291.044871795
[2024-09-20 23:11:13] 2024-09-21 03:10:56,630 | INFO     | -- intersect: -102401514899.8779
[2024-09-20 23:11:13] 2024-09-21 03:10:56,630 | INFO     | intersect: -102401514899.8779
[2024-09-20 23:11:13] 2024-09-21 03:10:56,630 | INFO     | chi2: 3.3746981918701624
[2024-09-20 23:11:13] 2024-09-21 03:10:56,630 | INFO     | current chi2=3.3746981918701624 (change=53.191535005812874 %)
[2024-09-20 23:11:13] 2024-09-21 03:10:56,630 | INFO     | model: linear, x: [1726879010.0, 1726879071.0, 1726879132.0, 1726879193.0, 1726879254.0, 1726879315.0, 1726879376.0, 1726879437.0, 1726879498.0, 1726879559.0, 1726
[2024-09-20 23:11:13] 2024-09-21 03:10:56,630 | INFO     | sum of square deviations: 1067567469.894037
[2024-09-20 23:11:13] 2024-09-21 03:10:56,631 | INFO     | sum of deviations: 35758377094.39075
[2024-09-20 23:11:13] 2024-09-21 03:10:56,631 | INFO     | mean x: 1726883585.02649
[2024-09-20 23:11:13] 2024-09-21 03:10:56,631 | INFO     | mean y: 2453640.1523178807
[2024-09-20 23:11:13] 2024-09-21 03:10:56,631 | INFO     | -- intersect: -57839843144.72419
[2024-09-20 23:11:13] 2024-09-21 03:10:56,631 | INFO     | intersect: -57839843144.72419
[2024-09-20 23:11:13] 2024-09-21 03:10:56,632 | INFO     | chi2: 1.556237446193024
[2024-09-20 23:11:13] 2024-09-21 03:10:56,632 | INFO     | current chi2=1.556237446193024 (change=53.885137048934105 %)
[2024-09-20 23:11:13] 2024-09-21 03:10:56,632 | INFO     | model: linear, x: [1726879315.0, 1726879376.0, 1726879437.0, 1726879498.0, 1726879559.0, 1726879620.0, 1726879681.0, 1726879742.0, 1726879803.0, 1726879864.0, 1726
[2024-09-20 23:11:13] 2024-09-21 03:10:56,632 | INFO     | sum of square deviations: 964987582.3904128
[2024-09-20 23:11:13] 2024-09-21 03:10:56,633 | INFO     | sum of deviations: 6622159064.842464
[2024-09-20 23:11:13] 2024-09-21 03:10:56,633 | INFO     | mean x: 1726883737.5273972
[2024-09-20 23:11:13] 2024-09-21 03:10:56,633 | INFO     | mean y: 2496843.664383562
[2024-09-20 23:11:13] 2024-09-21 03:10:56,633 | INFO     | -- intersect: -11848120723.940186
[2024-09-20 23:11:13] 2024-09-21 03:10:56,633 | INFO     | intersect: -11848120723.940186
[2024-09-20 23:11:13] 2024-09-21 03:10:56,633 | INFO     | chi2: 0.14762337703542144
[2024-09-20 23:11:13] 2024-09-21 03:10:56,633 | INFO     | current chi2=0.14762337703542144 (change=90.5140839917104 %)
[2024-09-20 23:11:13] 2024-09-21 03:10:56,633 | INFO     | model: linear, x: [1726879620.0, 1726879681.0, 1726879742.0, 1726879803.0, 1726879864.0, 1726879925.0, 1726879986.0, 1726880047.0, 1726880108.0, 1726880169.0, 1726
[2024-09-20 23:11:13] 2024-09-21 03:10:56,633 | INFO     | sum of square deviations: 869198519.8865247
[2024-09-20 23:11:13] 2024-09-21 03:10:56,634 | INFO     | sum of deviations: -2315724557.503547
[2024-09-20 23:11:13] 2024-09-21 03:10:56,634 | INFO     | mean x: 1726883890.0283687
[2024-09-20 23:11:13] 2024-09-21 03:10:56,634 | INFO     | mean y: 2511008.375886525
[2024-09-20 23:11:13] 2024-09-21 03:10:56,634 | INFO     | -- intersect: 4603286712.202468
[2024-09-20 23:11:13] 2024-09-21 03:10:56,634 | INFO     | intersect: 4603286712.202468
[2024-09-20 23:11:13] 2024-09-21 03:10:56,635 | INFO     | chi2: 0.007417554490122645
[2024-09-20 23:11:13] 2024-09-21 03:10:56,635 | INFO     | current chi2=0.007417554490122645 (change=94.97535238721517 %)
[2024-09-20 23:11:13] 2024-09-21 03:10:56,635 | INFO     | model: linear, x: [1726879925.0, 1726879986.0, 1726880047.0, 1726880108.0, 1726880169.0, 1726880230.0, 1726880291.0, 1726880352.0, 1726880413.0, 1726880474.0, 1726
[2024-09-20 23:11:13] 2024-09-21 03:10:56,635 | INFO     | sum of square deviations: 779967719.8823526
[2024-09-20 23:11:13] 2024-09-21 03:10:56,635 | INFO     | sum of deviations: -2741421255.470589
[2024-09-20 23:11:13] 2024-09-21 03:10:56,636 | INFO     | mean x: 1726884042.5294118
[2024-09-20 23:11:13] 2024-09-21 03:10:56,636 | INFO     | mean y: 2511723.492647059
[2024-09-20 23:11:13] 2024-09-21 03:10:56,636 | INFO     | -- intersect: 6072143195.724834
[2024-09-20 23:11:13] 2024-09-21 03:10:56,636 | INFO     | intersect: 6072143195.724834
[2024-09-20 23:11:13] 2024-09-21 03:10:56,636 | INFO     | chi2: 0.00630627800957698
[2024-09-20 23:11:13] 2024-09-21 03:10:56,636 | INFO     | current chi2=0.00630627800957698 (change=14.98170969994844 %)
[2024-09-20 23:11:13] 2024-09-21 03:10:56,636 | INFO     | left removable region: 50
[2024-09-20 23:11:13] 2024-09-21 03:10:56,636 | INFO     | model: linear, x: [1726881450.0, 1726881511.0, 1726881572.0, 1726881633.0, 1726881694.0, 1726881755.0, 1726881816.0, 1726881877.0, 1726881938.0, 1726881999.0, 1726
[2024-09-20 23:11:13] 2024-09-21 03:10:56,636 | INFO     | sum of square deviations: 358925466.9142853
[2024-09-20 23:11:13] 2024-09-21 03:10:56,637 | INFO     | sum of deviations: 585196760.5142857
[2024-09-20 23:11:13] 2024-09-21 03:10:56,637 | INFO     | mean x: 1726884622.0285714
[2024-09-20 23:11:13] 2024-09-21 03:10:56,637 | INFO     | mean y: 2504078.495238095
[2024-09-20 23:11:13] 2024-09-21 03:10:56,637 | INFO     | -- intersect: -2813031122.394782
[2024-09-20 23:11:13] 2024-09-21 03:10:56,637 | INFO     | intersect: -2813031122.394782
[2024-09-20 23:11:13] 2024-09-21 03:10:56,637 | INFO     | chi2: 2.9887132652243082e-05
[2024-09-20 23:11:13] 2024-09-21 03:10:56,637 | INFO     | -- intersect: -2813031122.394782
[2024-09-20 23:11:13] 2024-09-21 03:10:56,638 | INFO     | current memory leak: 1.63 B/s (using 105 data points, chi2=0.00)
[2024-09-20 23:11:13] 2024-09-21 03:10:56,638 | INFO     | ..............................
[2024-09-20 23:11:13] 2024-09-21 03:10:56,638 | INFO     | . Timing measurements:
[2024-09-20 23:11:13] 2024-09-21 03:10:56,638 | INFO     | . get job = 0 s
[2024-09-20 23:11:13] 2024-09-21 03:10:56,638 | INFO     | . initial setup = 7 s
[2024-09-20 23:11:13] 2024-09-21 03:10:56,638 | INFO     | . payload setup = 53 s
[2024-09-20 23:11:13] 2024-09-21 03:10:56,638 | INFO     | . stage-in = 0 s
[2024-09-20 23:11:13] 2024-09-21 03:10:56,638 | INFO     | . payload execution = 9859 s
[2024-09-20 23:11:13] 2024-09-21 03:10:56,639 | INFO     | . stage-out = 2 s
[2024-09-20 23:11:13] 2024-09-21 03:10:56,639 | INFO     | . log creation = 0 s
[2024-09-20 23:11:13] 2024-09-21 03:10:56,639 | INFO     | ..............................
[2024-09-20 23:11:13] 2024-09-21 03:10:56,721 | INFO     | 
[2024-09-20 23:11:13] 2024-09-21 03:10:56,721 | INFO     | job summary report
[2024-09-20 23:11:13] 2024-09-21 03:10:56,721 | INFO     | --------------------------------------------------
[2024-09-20 23:11:13] 2024-09-21 03:10:56,721 | INFO     | PanDA job id: 6340408928
[2024-09-20 23:11:13] 2024-09-21 03:10:56,721 | INFO     | task id: 41078623
[2024-09-20 23:11:13] 2024-09-21 03:10:56,721 | INFO     | errors: (none)
[2024-09-20 23:11:13] 2024-09-21 03:10:56,721 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | pilot state: finished 
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | transexitcode: 0
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | exeerrorcode: 0
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | exeerrordiag: 
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | exitcode: 0
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | exitmsg: OK
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | cpuconsumptiontime: 25146 s
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | nevents: 400
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | neventsw: 0
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | pid: 60441
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | pgrp: 60441
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | corecount: 8
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | event service: False
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | sizes: {0: 2438708, 1: 2440244, 12: 2440244, 23: 2440272, 33: 2440300, 35: 2440534, 44: 2440690, 9917: 2469083, 9920: 2478043, 9921: 2478099, 9958: 2478269}
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | --------------------------------------------------
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | 
[2024-09-20 23:11:13] 2024-09-21 03:10:56,722 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-09-20 23:11:13] 2024-09-21 03:10:56,740 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,740 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,740 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,740 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | job 6340408928 has completed (purged errors)
[2024-09-20 23:11:13] 2024-09-21 03:10:56,741 | INFO     | overall cleanup function is called
[2024-09-20 23:11:13] 2024-09-21 03:10:57,748 | INFO     | --- collectZombieJob: --- 10, [60441]
[2024-09-20 23:11:13] 2024-09-21 03:10:57,749 | INFO     | zombie collector waiting for pid 60441
[2024-09-20 23:11:13] 2024-09-21 03:10:57,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-20 23:11:13] 2024-09-21 03:10:57,749 | INFO     | collected zombie processes
[2024-09-20 23:11:13] 2024-09-21 03:10:57,749 | INFO     | will  attempt to kill all subprocesses of pid=60441
[2024-09-20 23:11:13] 2024-09-21 03:10:58,097 | INFO     | process IDs to be killed: [60441] (in reverse order)
[2024-09-20 23:11:13] 2024-09-21 03:10:58,355 | WARNING  | found no corresponding commands to process id(s)
[2024-09-20 23:11:13] 2024-09-21 03:10:58,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-20 23:11:13] 2024-09-21 03:10:58,369 | INFO     | did not find any defunct processes belonging to 60441
[2024-09-20 23:11:13] 2024-09-21 03:10:58,384 | INFO     | did not find any defunct processes belonging to 60441
[2024-09-20 23:11:13] 2024-09-21 03:10:58,384 | INFO     | ready for new job
[2024-09-20 23:11:13] 2024-09-21 03:10:58,384 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-20 23:11:13] 2024-09-21 03:10:58,386 | INFO     | **************************************
[2024-09-20 23:11:13] 2024-09-21 03:10:58,386 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-20 23:11:13] 2024-09-21 03:10:58,386 | INFO     | **************************************
[2024-09-20 23:11:13] 2024-09-21 03:10:58,386 | INFO     | 
[2024-09-20 23:11:13] 2024-09-21 03:10:58,390 | INFO     | architecture information:
[2024-09-20 23:11:13] 2024-09-21 03:10:58,415 | INFO     | executing command: cat /etc/os-release
[2024-09-20 23:11:13] 2024-09-21 03:10:58,483 | INFO     | cat /etc/os-release:
[2024-09-20 23:11:13] NAME="CentOS Linux"
[2024-09-20 23:11:13] VERSION="7 (Core)"
[2024-09-20 23:11:13] ID="centos"
[2024-09-20 23:11:13] ID_LIKE="rhel fedora"
[2024-09-20 23:11:13] VERSION_ID="7"
[2024-09-20 23:11:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-20 23:11:13] ANSI_COLOR="0;31"
[2024-09-20 23:11:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-20 23:11:13] HOME_URL="https://www.centos.org/"
[2024-09-20 23:11:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-20 23:11:13] 
[2024-09-20 23:11:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-20 23:11:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-20 23:11:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-20 23:11:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-20 23:11:13] 
[2024-09-20 23:11:13] 2024-09-21 03:10:58,483 | INFO     | **************************************
[2024-09-20 23:11:13] 2024-09-21 03:10:58,987 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-09-20 23:11:13] 2024-09-21 03:10:59,004 | INFO     | sufficient remaining disk space (100911808512 B)
[2024-09-20 23:11:13] 2024-09-21 03:10:59,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-20 23:11:13] 2024-09-21 03:10:59,004 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-20 23:11:13] 2024-09-21 03:10:59,005 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-20 23:11:13] 2024-09-21 03:10:59,005 | INFO     | found 0 job(s) in 20 queues
[2024-09-20 23:11:13] 2024-09-21 03:10:59,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-20 23:11:13] 2024-09-21 03:10:59,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-20 23:11:13] 2024-09-21 03:10:59,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-20 23:11:13] 2024-09-21 03:10:59,482 | INFO     | all data control threads have been joined
[2024-09-20 23:11:13] 2024-09-21 03:10:59,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-20 23:11:13] 2024-09-21 03:10:59,983 | INFO     | aborting loop
[2024-09-20 23:11:13] 2024-09-21 03:11:00,017 | INFO     | [job] retrieve thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:00,084 | INFO     | [job] validate thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:00,278 | INFO     | [payload] validate_pre thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:00,478 | INFO     | [job] create_data_payload thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:00,482 | INFO     | [data] copytool_in thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:00,488 | INFO     | [data] control thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:00,492 | INFO     | all payload control threads have been joined
[2024-09-20 23:11:13] 2024-09-21 03:11:00,517 | INFO     | all job control threads have been joined
[2024-09-20 23:11:13] 2024-09-21 03:11:00,524 | INFO     | [payload] validate_post thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:00,572 | INFO     | [payload] execute_payloads thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:00,763 | INFO     | [payload] failed_post thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:00,988 | INFO     | [job] job monitor thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:01,012 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:01,238 | INFO     | [data] copytool_out thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:01,497 | INFO     | [payload] control thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:01,523 | INFO     | [job] control thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:01,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-20 23:11:13] 2024-09-21 03:11:01,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-20 23:11:13] 2024-09-21 03:11:02,743 | INFO     | [job] queue monitor thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:05,582 | INFO     | [data] queue_monitor thread has finished
[2024-09-20 23:11:13] 2024-09-21 03:11:06,932 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140641680217920)>', '<ExcThread(monitor, started 140641086453504)>']
[2024-09-20 23:11:13] 2024-09-21 03:11:07,064 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-20 23:11:13] 2024-09-21 03:11:07,065 | INFO     | [monitor] control thread has ended
[2024-09-20 23:11:13] 2024-09-21 03:11:11,958 | INFO     | all workflow threads have been joined
[2024-09-20 23:11:13] 2024-09-21 03:11:11,959 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-20 23:11:13] 2024-09-21 03:11:11,959 | INFO     | traces error code: 0
[2024-09-20 23:11:13] 2024-09-21 03:11:11,959 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-20 23:11:13] 2024-09-21 03:11:12,198 [wrapper] ==== pilot stdout END ====
[2024-09-20 23:11:13] 2024-09-21 03:11:12,204 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-20 23:11:13] 2024-09-21 03:11:12,216 [wrapper] pilotpid: 1804
[2024-09-20 23:11:13] 2024-09-21 03:11:12,234 [wrapper] Pilot exit status: 0
[2024-09-20 23:11:13] 2024-09-21 03:11:12,346 [wrapper] pandaids: 6340408928
[2024-09-20 23:11:13] 2024-09-21 03:11:12,454 [wrapper] cleanup supervisor_pilot 46455 1805
[2024-09-20 23:11:13] 2024-09-21 03:11:12,456 [wrapper] Test setup, not cleaning
[2024-09-20 23:11:13] 2024-09-21 03:11:12,459 [wrapper] ==== wrapper stdout END ====
[2024-09-20 23:11:13] 2024-09-21 03:11:12,465 [wrapper] ==== wrapper stderr END ====
[2024-09-20 23:11:13] 2024-09-21 03:11:12,511 [wrapper] apfmon messages muted
[2024-09-20 23:11:13]  *** Error codes and diagnostics ***
[2024-09-20 23:11:13]     "exeErrorCode": 0,
[2024-09-20 23:11:13]     "exeErrorDiag": "",
[2024-09-20 23:11:13]     "pilotErrorCode": 0,
[2024-09-20 23:11:13]     "pilotErrorDiag": "",
[2024-09-20 23:11:13]  *** Listing of results directory ***
[2024-09-20 23:11:13] total 601708
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas    482533 Sep 20 17:40 pilot3.tar.gz
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas      5655 Sep 20 18:00 queuedata.json
[2024-09-20 23:11:13] -rwx------ 1 boincer umatlas     33679 Sep 20 18:00 runpilot2-wrapper.sh
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas       100 Sep 20 20:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-20 23:11:13] -rwxr-xr-x 1 boincer umatlas      7986 Sep 20 20:21 run_atlas
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas       105 Sep 20 20:21 job.xml
[2024-09-20 23:11:13] -rw-r--r-- 2 boincer umatlas 443603939 Sep 20 20:22 EVNT.41078621._000711.pool.root.1
[2024-09-20 23:11:13] -rw-r--r-- 2 boincer umatlas     17539 Sep 20 20:22 start_atlas.sh
[2024-09-20 23:11:13] drwxrwx--x 2 boincer umatlas      4096 Sep 20 20:22 shared
[2024-09-20 23:11:13] -rw-r--r-- 2 boincer umatlas    495965 Sep 20 20:22 input.tar.gz
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas         0 Sep 20 20:22 boinc_lockfile
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas      2562 Sep 20 20:22 pandaJob.out
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas       424 Sep 20 20:22 setup.sh.local
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas   1008785 Sep 20 20:23 agis_schedconf.cvmfs.json
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas   1618603 Sep 20 20:23 agis_ddmendpoints.agis.ALL.json
[2024-09-20 23:11:13] drwx------ 4 boincer umatlas      4096 Sep 20 20:23 pilot3
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas      6302 Sep 20 23:02 init_data.xml
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas 166169856 Sep 20 23:09 HITS.41078623._017829.pool.root.1
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas       532 Sep 20 23:09 boinc_task_state.xml
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas      1072 Sep 20 23:10 memory_monitor_summary.json
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas    368433 Sep 20 23:10 log.41078623._017829.job.log.tgz.1
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas        95 Sep 20 23:10 pilot_heartbeat.json
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas      7738 Sep 20 23:10 heartbeat.json
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas      8192 Sep 20 23:11 boinc_mmap_file
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas        27 Sep 20 23:11 wrapper_checkpoint.txt
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas      4339 Sep 20 23:11 pilotlog.txt
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas    896241 Sep 20 23:11 log.41078623._017829.job.log.1
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas       357 Sep 20 23:11 output.list
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas       620 Sep 20 23:11 runtime_log
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas   1280000 Sep 20 23:11 result.tar.gz
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas     11001 Sep 20 23:11 runtime_log.err
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas       648 Sep 20 23:11 DsFODmOr0B6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDm1SbKDm4000nm.diag
[2024-09-20 23:11:13] -rw-r--r-- 1 boincer umatlas     21682 Sep 20 23:11 stderr.txt
[2024-09-20 23:11:13] HITS file was successfully produced:
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas 166169856 Sep 20 23:09 shared/HITS.pool.root.1
[2024-09-20 23:11:13]  *** Contents of shared directory: ***
[2024-09-20 23:11:13] total 597252
[2024-09-20 23:11:13] -rw-r--r-- 2 boincer umatlas 443603939 Sep 20 20:22 ATLAS.root_0
[2024-09-20 23:11:13] -rw-r--r-- 2 boincer umatlas     17539 Sep 20 20:22 start_atlas.sh
[2024-09-20 23:11:13] -rw-r--r-- 2 boincer umatlas    495965 Sep 20 20:22 input.tar.gz
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas 166169856 Sep 20 23:09 HITS.pool.root.1
[2024-09-20 23:11:13] -rw------- 1 boincer umatlas   1280000 Sep 20 23:11 result.tar.gz
23:11:14 (73253): run_atlas exited; CPU time 24425.978972
23:11:14 (73253): called boinc_finish(0)

</stderr_txt>
]]>

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