Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
11:50:42 (266614): wrapper (7.7.26015): starting
11:50:42 (266614): wrapper: running run_atlas (--nthreads 4)
[2024-09-21 11:50:42] Arguments: --nthreads 4
[2024-09-21 11:50:42] Threads: 4
[2024-09-21 11:50:42] Checking for CVMFS
[2024-09-21 11:50:43] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-21 11:50:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-21 11:50:43] Running cvmfs_config stat atlas.cern.ch
[2024-09-21 11:50:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-21 11:50:43] 2.11.4.0 12539 789 56812 137483 3 56 2087684 4096001 909 130560 0 986180 99.993 238849 3413 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-09-21 11:50:43] CVMFS is ok
[2024-09-21 11:50:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-21 11:50:43] Checking for apptainer binary...
[2024-09-21 11:50:43] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-21 11:50:43] Running /usr/bin/apptainer --version
[2024-09-21 11:50:43] apptainer version 1.3.3
[2024-09-21 11:50:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-21 11:50:43] TS-P310
[2024-09-21 11:50:43] apptainer works
[2024-09-21 11:50:43] Set ATHENA_PROC_NUMBER=4
[2024-09-21 11:50:43] Set ATHENA_CORE_NUMBER=4
[2024-09-21 11:50:43] Starting ATLAS job with PandaID=6340288394
[2024-09-21 11:50:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-21 13:32:08]  *** The last 200 lines of the pilot log: ***
[2024-09-21 13:32:08]  guid=904fe417-a66f-4dd9-9304-4368395cd328
[2024-09-21 13:32:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-21 13:32:08]  is_tar=False
[2024-09-21 13:32:08]  lfn=log.41078623._014453.job.log.tgz.1
[2024-09-21 13:32:08]  mtime=0
[2024-09-21 13:32:08]  protocol_id=None
[2024-09-21 13:32:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-21 13:32:08]  replicas=None
[2024-09-21 13:32:08]  scope=mc23_13p6TeV
[2024-09-21 13:32:08]  status=None
[2024-09-21 13:32:08]  status_code=0
[2024-09-21 13:32:08]  storage_token=
[2024-09-21 13:32:08]  surl=/var/lib/boinc2/slots/0/PanDA_Pilot-6340288394/log.41078623._014453.job.log.tgz.1
[2024-09-21 13:32:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/58/log.41078623._014453.job.log.tgz.1
[2024-09-21 13:32:08]  workdir=None
[2024-09-21 13:32:08] ]
[2024-09-21 13:32:08] 2024-09-21 11:31:43,864 | INFO     | transferring file log.41078623._014453.job.log.tgz.1 from /var/lib/boinc2/slots/0/PanDA_Pilot-6340288394/log.41078623._014453.job.log.tgz.1 to /var/lib/boinc2/slot
[2024-09-21 13:32:08] 2024-09-21 11:31:43,865 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc2/slots/0/PanDA_Pilot-6340288394/log.41078623._014453.job.log.tgz.1 /var/lib/boinc2/slots/0/log.41078623._014453.j
[2024-09-21 13:32:08] 2024-09-21 11:31:43,877 | INFO     | adding to output.list: log.41078623._014453.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/58/log.41078623._014453.job.log.tg
[2024-09-21 13:32:08] 2024-09-21 11:31:43,877 | INFO     | summary of transferred files:
[2024-09-21 13:32:08] 2024-09-21 11:31:43,877 | INFO     |  -- lfn=log.41078623._014453.job.log.tgz.1, status_code=0, status=transferred
[2024-09-21 13:32:08] 2024-09-21 11:31:43,878 | INFO     | stage-out finished correctly
[2024-09-21 13:32:08] 2024-09-21 11:31:43,944 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-21 13:32:08] 2024-09-21 11:31:44,125 | INFO     | monitor loop #477: job 0:6340288394 is in state 'finished'
[2024-09-21 13:32:08] 2024-09-21 11:31:44,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-21 13:32:08] 2024-09-21 11:31:46,299 | INFO     | job 6340288394 has state=finished
[2024-09-21 13:32:08] 2024-09-21 11:31:46,299 | INFO     | preparing for final server update for job 6340288394 in state='finished'
[2024-09-21 13:32:08] 2024-09-21 11:31:46,299 | INFO     | this job has now completed (state=finished)
[2024-09-21 13:32:08] 2024-09-21 11:31:46,299 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-21 13:32:08] 2024-09-21 11:31:46,300 | INFO     | log transfer has been attempted: DONE
[2024-09-21 13:32:08] 2024-09-21 11:31:46,300 | INFO     | job 6340288394 has finished - writing final server update
[2024-09-21 13:32:08] 2024-09-21 11:31:46,300 | INFO     | total number of processed events: 400 (read)
[2024-09-21 13:32:08] 2024-09-21 11:31:46,301 | INFO     | executing command: lscpu
[2024-09-21 13:32:08] 2024-09-21 11:31:46,314 | INFO     | found 4 cores (4 cores per socket, 1 sockets)
[2024-09-21 13:32:08] 2024-09-21 11:31:46,315 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-21 13:32:08] 2024-09-21 11:31:46,333 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-21 13:32:08] 2024-09-21 11:31:46,629 | INFO     | monitor loop #478: job 0:6340288394 is in state 'finished'
[2024-09-21 13:32:08] 2024-09-21 11:31:46,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-21 13:32:08] 2024-09-21 11:31:49,132 | INFO     | monitor loop #479: job 0:6340288394 is in state 'finished'
[2024-09-21 13:32:08] 2024-09-21 11:31:49,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-21 13:32:08] 2024-09-21 11:31:49,250 | INFO     | CPU arch script returned: x86-64-v3
[2024-09-21 13:32:08] 2024-09-21 11:31:49,250 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6340288394/memory_monitor_summary.json (trf name=prmon)
[2024-09-21 13:32:08] 2024-09-21 11:31:49,251 | INFO     | extracted standard info from prmon json
[2024-09-21 13:32:08] 2024-09-21 11:31:49,251 | INFO     | extracted standard memory fields from prmon json
[2024-09-21 13:32:08] 2024-09-21 11:31:49,251 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-21 13:32:08] 2024-09-21 11:31:49,251 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-21 13:32:08] 2024-09-21 11:31:49,251 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-21 13:32:08] 2024-09-21 11:31:49,253 | INFO     | fitting pss+swap vs Time
[2024-09-21 13:32:08] 2024-09-21 11:31:49,253 | INFO     | model: linear, x: [1726912575.0, 1726912636.0, 1726912697.0, 1726912758.0, 1726912819.0, 1726912880.0, 1726912941.0, 1726913002.0, 1726913063.0, 1726913124.0, 1726
[2024-09-21 13:32:08] 2024-09-21 11:31:49,253 | INFO     | sum of square deviations: 241429643.0
[2024-09-21 13:32:08] 2024-09-21 11:31:49,254 | INFO     | sum of deviations: -4174625890.0
[2024-09-21 13:32:08] 2024-09-21 11:31:49,254 | INFO     | mean x: 1726915350.5
[2024-09-21 13:32:08] 2024-09-21 11:31:49,254 | INFO     | mean y: 2397828.4565217393
[2024-09-21 13:32:08] 2024-09-21 11:31:49,254 | INFO     | -- intersect: 29862962763.457996
[2024-09-21 13:32:08] 2024-09-21 11:31:49,254 | INFO     | intersect: 29862962763.457996
[2024-09-21 13:32:08] 2024-09-21 11:31:49,254 | INFO     | chi2: 0.03515715107071953
[2024-09-21 13:32:08] 2024-09-21 11:31:49,254 | INFO     | -- intersect: 29862962763.457996
[2024-09-21 13:32:08] 2024-09-21 11:31:49,254 | INFO     | current memory leak: -17.29 B/s (using 92 data points, chi2=0.04)
[2024-09-21 13:32:08] 2024-09-21 11:31:49,255 | INFO     | ..............................
[2024-09-21 13:32:08] 2024-09-21 11:31:49,255 | INFO     | . Timing measurements:
[2024-09-21 13:32:08] 2024-09-21 11:31:49,255 | INFO     | . get job = 0 s
[2024-09-21 13:32:08] 2024-09-21 11:31:49,255 | INFO     | . initial setup = 2 s
[2024-09-21 13:32:08] 2024-09-21 11:31:49,255 | INFO     | . payload setup = 3 s
[2024-09-21 13:32:08] 2024-09-21 11:31:49,255 | INFO     | . stage-in = 0 s
[2024-09-21 13:32:08] 2024-09-21 11:31:49,255 | INFO     | . payload execution = 6031 s
[2024-09-21 13:32:08] 2024-09-21 11:31:49,255 | INFO     | . stage-out = 0 s
[2024-09-21 13:32:08] 2024-09-21 11:31:49,255 | INFO     | . log creation = 0 s
[2024-09-21 13:32:08] 2024-09-21 11:31:49,255 | INFO     | ..............................
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | 
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | job summary report
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | --------------------------------------------------
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | PanDA job id: 6340288394
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | task id: 41078623
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | errors: (none)
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | pilot state: finished 
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | transexitcode: 0
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | exeerrorcode: 0
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | exeerrordiag: 
[2024-09-21 13:32:08] 2024-09-21 11:31:49,322 | INFO     | exitcode: 0
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | exitmsg: OK
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | cpuconsumptiontime: 22645 s
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | nevents: 400
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | neventsw: 0
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | pid: 276619
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | pgrp: 276619
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | corecount: 4
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | event service: False
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | sizes: {0: 2440166, 3: 2440372, 11: 2440400, 6038: 2467233, 6039: 2467232, 6041: 2476434, 6046: 2476548}
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | --------------------------------------------------
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | 
[2024-09-21 13:32:08] 2024-09-21 11:31:49,323 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2024-09-21 13:32:08] 2024-09-21 11:31:49,336 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,338 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-21 13:32:08] 2024-09-21 11:31:49,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,338 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-21 13:32:08] 2024-09-21 11:31:49,338 | INFO     | job 6340288394 has completed (purged errors)
[2024-09-21 13:32:08] 2024-09-21 11:31:49,338 | INFO     | overall cleanup function is called
[2024-09-21 13:32:08] 2024-09-21 11:31:50,342 | INFO     | --- collectZombieJob: --- 10, [276619]
[2024-09-21 13:32:08] 2024-09-21 11:31:50,342 | INFO     | zombie collector waiting for pid 276619
[2024-09-21 13:32:08] 2024-09-21 11:31:50,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-21 13:32:08] 2024-09-21 11:31:50,342 | INFO     | collected zombie processes
[2024-09-21 13:32:08] 2024-09-21 11:31:50,342 | INFO     | will  attempt to kill all subprocesses of pid=276619
[2024-09-21 13:32:08] 2024-09-21 11:31:50,384 | INFO     | process IDs to be killed: [276619] (in reverse order)
[2024-09-21 13:32:08] 2024-09-21 11:31:50,412 | WARNING  | found no corresponding commands to process id(s)
[2024-09-21 13:32:08] 2024-09-21 11:31:50,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-21 13:32:08] 2024-09-21 11:31:50,414 | INFO     | did not find any defunct processes belonging to 276619
[2024-09-21 13:32:08] 2024-09-21 11:31:50,416 | INFO     | did not find any defunct processes belonging to 276619
[2024-09-21 13:32:08] 2024-09-21 11:31:50,416 | INFO     | ready for new job
[2024-09-21 13:32:08] 2024-09-21 11:31:50,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-21 13:32:08] 2024-09-21 11:31:50,418 | INFO     | **************************************
[2024-09-21 13:32:08] 2024-09-21 11:31:50,418 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-21 13:32:08] 2024-09-21 11:31:50,418 | INFO     | **************************************
[2024-09-21 13:32:08] 2024-09-21 11:31:50,418 | INFO     | 
[2024-09-21 13:32:08] 2024-09-21 11:31:50,418 | INFO     | architecture information:
[2024-09-21 13:32:08] 2024-09-21 11:31:50,419 | INFO     | executing command: cat /etc/os-release
[2024-09-21 13:32:08] 2024-09-21 11:31:50,431 | INFO     | cat /etc/os-release:
[2024-09-21 13:32:08] NAME="CentOS Linux"
[2024-09-21 13:32:08] VERSION="7 (Core)"
[2024-09-21 13:32:08] ID="centos"
[2024-09-21 13:32:08] ID_LIKE="rhel fedora"
[2024-09-21 13:32:08] VERSION_ID="7"
[2024-09-21 13:32:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-21 13:32:08] ANSI_COLOR="0;31"
[2024-09-21 13:32:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-21 13:32:08] HOME_URL="https://www.centos.org/"
[2024-09-21 13:32:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-21 13:32:08] 
[2024-09-21 13:32:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-21 13:32:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-21 13:32:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-21 13:32:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-21 13:32:08] 
[2024-09-21 13:32:08] 2024-09-21 11:31:50,431 | INFO     | **************************************
[2024-09-21 13:32:08] 2024-09-21 11:31:50,934 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2024-09-21 13:32:08] 2024-09-21 11:31:50,944 | INFO     | sufficient remaining disk space (65371373568 B)
[2024-09-21 13:32:08] 2024-09-21 11:31:50,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-21 13:32:08] 2024-09-21 11:31:50,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-21 13:32:08] 2024-09-21 11:31:50,945 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-21 13:32:08] 2024-09-21 11:31:50,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-21 13:32:08] 2024-09-21 11:31:50,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-21 13:32:08] 2024-09-21 11:31:50,945 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-21 13:32:08] 2024-09-21 11:31:50,945 | INFO     | found 0 job(s) in 20 queues
[2024-09-21 13:32:08] 2024-09-21 11:31:50,946 | INFO     | aborting loop
[2024-09-21 13:32:08] 2024-09-21 11:31:50,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-21 13:32:08] 2024-09-21 11:31:50,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-21 13:32:08] 2024-09-21 11:31:51,048 | INFO     | all payload control threads have been joined
[2024-09-21 13:32:08] 2024-09-21 11:31:51,647 | INFO     | all data control threads have been joined
[2024-09-21 13:32:08] 2024-09-21 11:31:51,949 | INFO     | [job] queue monitor thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:51,949 | INFO     | [job] retrieve thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:51,949 | INFO     | [job] job monitor thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:51,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-21 13:32:08] 2024-09-21 11:31:51,955 | INFO     | [payload] execute_payloads thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:52,053 | INFO     | [payload] control thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:52,475 | INFO     | all job control threads have been joined
[2024-09-21 13:32:08] 2024-09-21 11:31:52,582 | INFO     | [data] copytool_in thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:52,631 | INFO     | [payload] validate_post thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:52,649 | INFO     | [data] control thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:52,926 | INFO     | [job] validate thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:53,030 | INFO     | [payload] failed_post thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:53,072 | INFO     | [payload] validate_pre thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:53,112 | INFO     | [job] create_data_payload thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:53,480 | INFO     | [job] control thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:53,957 | INFO     | [data] copytool_out thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:31:54,949 | INFO     | [data] queue_monitor thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:32:01,435 | INFO     | job.realtimelogging is not enabled
[2024-09-21 13:32:08] 2024-09-21 11:32:02,441 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-21 13:32:08] 2024-09-21 11:32:03,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139624662288192)>', '<ExcThread(monitor, started 139623791576832)>']
[2024-09-21 13:32:08] 2024-09-21 11:32:04,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-21 13:32:08] 2024-09-21 11:32:04,002 | INFO     | [monitor] control thread has ended
[2024-09-21 13:32:08] 2024-09-21 11:32:08,667 | INFO     | all workflow threads have been joined
[2024-09-21 13:32:08] 2024-09-21 11:32:08,668 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-21 13:32:08] 2024-09-21 11:32:08,668 | INFO     | traces error code: 0
[2024-09-21 13:32:08] 2024-09-21 11:32:08,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-21 13:32:08] 2024-09-21 11:32:08,741 [wrapper] ==== pilot stdout END ====
[2024-09-21 13:32:08] 2024-09-21 11:32:08,743 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-21 13:32:08] 2024-09-21 11:32:08,745 [wrapper] pilotpid: 270240
[2024-09-21 13:32:08] 2024-09-21 11:32:08,746 [wrapper] Pilot exit status: 0
[2024-09-21 13:32:08] 2024-09-21 11:32:08,753 [wrapper] pandaids: 6340288394
[2024-09-21 13:32:08] 2024-09-21 11:32:08,771 [wrapper] cleanup supervisor_pilot  312400 270241
[2024-09-21 13:32:08] 2024-09-21 11:32:08,772 [wrapper] Test setup, not cleaning
[2024-09-21 13:32:08] 2024-09-21 11:32:08,774 [wrapper] ==== wrapper stdout END ====
[2024-09-21 13:32:08] 2024-09-21 11:32:08,776 [wrapper] ==== wrapper stderr END ====
[2024-09-21 13:32:08] 2024-09-21 11:32:08,780 [wrapper] apfmon messages muted
[2024-09-21 13:32:08]  *** Error codes and diagnostics ***
[2024-09-21 13:32:08]     "exeErrorCode": 0,
[2024-09-21 13:32:08]     "exeErrorDiag": "",
[2024-09-21 13:32:08]     "pilotErrorCode": 0,
[2024-09-21 13:32:08]     "pilotErrorDiag": "",
[2024-09-21 13:32:08]  *** Listing of results directory ***
[2024-09-21 13:32:08] insgesamt 595972
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc    482533 20. Sep 20:44 pilot3.tar.gz
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc      5655 20. Sep 20:50 queuedata.json
[2024-09-21 13:32:08] -rwx------ 1 boinc boinc     33679 20. Sep 20:54 runpilot2-wrapper.sh
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc       100 21. Sep 11:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-21 13:32:08] -rwxr-xr-x 1 boinc boinc      7986 21. Sep 11:50 run_atlas
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc       105 21. Sep 11:50 job.xml
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc      6704 21. Sep 11:50 init_data.xml
[2024-09-21 13:32:08] -rw-r--r-- 2 boinc boinc 442342285 21. Sep 11:50 EVNT.41078621._000559.pool.root.1
[2024-09-21 13:32:08] drwxrwx--x 2 boinc boinc      4096 21. Sep 11:50 shared
[2024-09-21 13:32:08] -rw-r--r-- 2 boinc boinc    495969 21. Sep 11:50 input.tar.gz
[2024-09-21 13:32:08] -rw-r--r-- 2 boinc boinc     17539 21. Sep 11:50 start_atlas.sh
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc         0 21. Sep 11:50 boinc_lockfile
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc      2561 21. Sep 11:50 pandaJob.out
[2024-09-21 13:32:08] -rw------- 1 boinc boinc       461 21. Sep 11:50 setup.sh.local
[2024-09-21 13:32:08] -rw------- 1 boinc boinc   1008801 21. Sep 11:50 agis_schedconf.cvmfs.json
[2024-09-21 13:32:08] -rw------- 1 boinc boinc   1618603 21. Sep 11:50 agis_ddmendpoints.agis.ALL.json
[2024-09-21 13:32:08] drwx------ 4 boinc boinc      4096 21. Sep 11:50 pilot3
[2024-09-21 13:32:08] -rw------- 1 boinc boinc        95 21. Sep 13:30 pilot_heartbeat.json
[2024-09-21 13:32:08] -rw------- 1 boinc boinc 162411698 21. Sep 13:31 HITS.41078623._014453.pool.root.1
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc       530 21. Sep 13:31 boinc_task_state.xml
[2024-09-21 13:32:08] -rw------- 1 boinc boinc      1024 21. Sep 13:31 memory_monitor_summary.json
[2024-09-21 13:32:08] -rw------- 1 boinc boinc    265105 21. Sep 13:31 log.41078623._014453.job.log.tgz.1
[2024-09-21 13:32:08] -rw------- 1 boinc boinc      7675 21. Sep 13:31 heartbeat.json
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc      8192 21. Sep 13:31 boinc_mmap_file
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc        27 21. Sep 13:31 wrapper_checkpoint.txt
[2024-09-21 13:32:08] -rw------- 1 boinc boinc      4411 21. Sep 13:32 pilotlog.txt
[2024-09-21 13:32:08] -rw------- 1 boinc boinc    569992 21. Sep 13:32 log.41078623._014453.job.log.1
[2024-09-21 13:32:08] -rw------- 1 boinc boinc       357 21. Sep 13:32 output.list
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc       620 21. Sep 13:32 runtime_log
[2024-09-21 13:32:08] -rw------- 1 boinc boinc    849920 21. Sep 13:32 result.tar.gz
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc     11355 21. Sep 13:32 runtime_log.err
[2024-09-21 13:32:08] -rw------- 1 boinc boinc       633 21. Sep 13:32 BNwMDmmwxB6n9Rq4apOajLDm4fhM0noT9bVorHsSDmMJSKDmbLGfyn.diag
[2024-09-21 13:32:08] -rw-r--r-- 1 boinc boinc     21134 21. Sep 13:32 stderr.txt
[2024-09-21 13:32:08] HITS file was successfully produced:
[2024-09-21 13:32:08] -rw------- 1 boinc boinc 162411698 21. Sep 13:31 shared/HITS.pool.root.1
[2024-09-21 13:32:08]  *** Contents of shared directory: ***
[2024-09-21 13:32:08] insgesamt 591932
[2024-09-21 13:32:08] -rw-r--r-- 2 boinc boinc 442342285 21. Sep 11:50 ATLAS.root_0
[2024-09-21 13:32:08] -rw-r--r-- 2 boinc boinc    495969 21. Sep 11:50 input.tar.gz
[2024-09-21 13:32:08] -rw-r--r-- 2 boinc boinc     17539 21. Sep 11:50 start_atlas.sh
[2024-09-21 13:32:08] -rw------- 1 boinc boinc 162411698 21. Sep 13:31 HITS.pool.root.1
[2024-09-21 13:32:08] -rw------- 1 boinc boinc    849920 21. Sep 13:32 result.tar.gz
13:32:10 (266614): run_atlas exited; CPU time 22636.595607
13:32:10 (266614): called boinc_finish(0)

</stderr_txt>
]]>

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