Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:52:32 (1767004): wrapper (7.7.26015): starting
16:52:32 (1767004): wrapper: running run_atlas (--nthreads 12)
[2024-09-08 16:52:32] Arguments: --nthreads 12
[2024-09-08 16:52:32] Threads: 12
[2024-09-08 16:52:32] Checking for CVMFS
[2024-09-08 16:52:33] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-08 16:52:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-08 16:52:33] Running cvmfs_config stat atlas.cern.ch
[2024-09-08 16:52:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-08 16:52:33] 2.11.4.0 3281645 24938 237268 137017 3 56 37922427 46080001 6447 130560 0 161077526 99.888 47224810 19636 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-09-08 16:52:33] CVMFS is ok
[2024-09-08 16:52:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-08 16:52:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-08 16:52:33] Further information can be found at the LHC@home message board.
[2024-09-08 16:52:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-08 16:52:33] Checking for apptainer binary...
[2024-09-08 16:52:33] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-08 16:52:33] Running /usr/bin/apptainer --version
[2024-09-08 16:52:33] apptainer version 1.3.3-1.el9
[2024-09-08 16:52:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-08 16:52:33] mff2102.farm.particle.cz
[2024-09-08 16:52:33] apptainer works
[2024-09-08 16:52:33] Set ATHENA_PROC_NUMBER=12
[2024-09-08 16:52:33] Set ATHENA_CORE_NUMBER=12
[2024-09-08 16:52:33] Starting ATLAS job with PandaID=6323232635
[2024-09-08 16:52:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-08 20:50:59]  *** The last 200 lines of the pilot log: ***
[2024-09-08 20:50:59] 2024-09-08 18:50:41,732 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-08 20:50:59] 2024-09-08 18:50:41,732 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-08 20:50:59] 2024-09-08 18:50:41,737 | INFO     | fitting pss+swap vs Time
[2024-09-08 20:50:59] 2024-09-08 18:50:41,737 | INFO     | model: linear, x: [1725807196.0, 1725807257.0, 1725807318.0, 1725807379.0, 1725807440.0, 1725807501.0, 1725807562.0, 1725807623.0, 1725807684.0, 1725807745.0, 1725
[2024-09-08 20:50:59] 2024-09-08 18:50:41,738 | INFO     | sum of square deviations: 3972995422.5
[2024-09-08 20:50:59] 2024-09-08 18:50:41,740 | INFO     | sum of deviations: 82069511904.5
[2024-09-08 20:50:59] 2024-09-08 18:50:41,740 | INFO     | mean x: 1725814302.5
[2024-09-08 20:50:59] 2024-09-08 18:50:41,740 | INFO     | mean y: 2283902.9273504275
[2024-09-08 20:50:59] 2024-09-08 18:50:41,740 | INFO     | -- intersect: -35647577821.518196
[2024-09-08 20:50:59] 2024-09-08 18:50:41,740 | INFO     | intersect: -35647577821.518196
[2024-09-08 20:50:59] 2024-09-08 18:50:41,741 | INFO     | chi2: 4.3238021544925855
[2024-09-08 20:50:59] 2024-09-08 18:50:41,741 | INFO     | model: linear, x: [1725807196.0, 1725807257.0, 1725807318.0, 1725807379.0, 1725807440.0, 1725807501.0, 1725807562.0, 1725807623.0, 1725807684.0, 1725807745.0, 1725
[2024-09-08 20:50:59] 2024-09-08 18:50:41,741 | INFO     | sum of square deviations: 3723716330.0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,743 | INFO     | sum of deviations: 93409914880.0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,743 | INFO     | mean x: 1725814150.0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,743 | INFO     | mean y: 2290685.4148471616
[2024-09-08 20:50:59] 2024-09-08 18:50:41,743 | INFO     | -- intersect: -43289984709.31146
[2024-09-08 20:50:59] 2024-09-08 18:50:41,743 | INFO     | intersect: -43289984709.31146
[2024-09-08 20:50:59] 2024-09-08 18:50:41,743 | INFO     | chi2: 3.619481633342073
[2024-09-08 20:50:59] 2024-09-08 18:50:41,744 | INFO     | current chi2=3.619481633342073 (change=16.289379023013307 %)
[2024-09-08 20:50:59] 2024-09-08 18:50:41,744 | INFO     | right removable region: 228
[2024-09-08 20:50:59] 2024-09-08 18:50:41,744 | INFO     | model: linear, x: [1725807501.0, 1725807562.0, 1725807623.0, 1725807684.0, 1725807745.0, 1725807806.0, 1725807867.0, 1725807928.0, 1725807989.0, 1725808050.0, 1725
[2024-09-08 20:50:59] 2024-09-08 18:50:41,744 | INFO     | sum of square deviations: 3723716330.0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,746 | INFO     | sum of deviations: 34241479164.0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,746 | INFO     | mean x: 1725814455.0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,746 | INFO     | mean y: 2313060.0262008733
[2024-09-08 20:50:59] 2024-09-08 18:50:41,746 | INFO     | -- intersect: -15867434918.819576
[2024-09-08 20:50:59] 2024-09-08 18:50:41,746 | INFO     | intersect: -15867434918.819576
[2024-09-08 20:50:59] 2024-09-08 18:50:41,746 | INFO     | chi2: 2.3198225639141645
[2024-09-08 20:50:59] 2024-09-08 18:50:41,747 | INFO     | current chi2=2.3198225639141645 (change=46.3476245899969 %)
[2024-09-08 20:50:59] 2024-09-08 18:50:41,747 | INFO     | model: linear, x: [1725807806.0, 1725807867.0, 1725807928.0, 1725807989.0, 1725808050.0, 1725808111.0, 1725808172.0, 1725808233.0, 1725808294.0, 1725808355.0, 1725
[2024-09-08 20:50:59] 2024-09-08 18:50:41,747 | INFO     | sum of square deviations: 3485088600.0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,748 | INFO     | sum of deviations: -506658588.5
[2024-09-08 20:50:59] 2024-09-08 18:50:41,749 | INFO     | mean x: 1725814607.5
[2024-09-08 20:50:59] 2024-09-08 18:50:41,749 | INFO     | mean y: 2335275.90625
[2024-09-08 20:50:59] 2024-09-08 18:50:41,749 | INFO     | -- intersect: 253232424.70431256
[2024-09-08 20:50:59] 2024-09-08 18:50:41,749 | INFO     | intersect: 253232424.70431256
[2024-09-08 20:50:59] 2024-09-08 18:50:41,749 | INFO     | chi2: 1.379720882610036
[2024-09-08 20:50:59] 2024-09-08 18:50:41,749 | INFO     | current chi2=1.379720882610036 (change=40.52472356842345 %)
[2024-09-08 20:50:59] 2024-09-08 18:50:41,750 | INFO     | model: linear, x: [1725808111.0, 1725808172.0, 1725808233.0, 1725808294.0, 1725808355.0, 1725808416.0, 1725808477.0, 1725808538.0, 1725808599.0, 1725808660.0, 1725
[2024-09-08 20:50:59] 2024-09-08 18:50:41,750 | INFO     | sum of square deviations: 3256879670.0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,751 | INFO     | sum of deviations: -17669052844.0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,751 | INFO     | mean x: 1725814760.0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,751 | INFO     | mean y: 2346703.913242009
[2024-09-08 20:50:59] 2024-09-08 18:50:41,751 | INFO     | -- intersect: 9365146464.149757
[2024-09-08 20:50:59] 2024-09-08 18:50:41,752 | INFO     | intersect: 9365146464.149757
[2024-09-08 20:50:59] 2024-09-08 18:50:41,752 | INFO     | chi2: 1.1075751946604697
[2024-09-08 20:50:59] 2024-09-08 18:50:41,752 | INFO     | current chi2=1.1075751946604697 (change=19.724691521283983 %)
[2024-09-08 20:50:59] 2024-09-08 18:50:41,752 | INFO     | left removable region: 30
[2024-09-08 20:50:59] 2024-09-08 18:50:41,752 | INFO     | model: linear, x: [1725809026.0, 1725809087.0, 1725809148.0, 1725809209.0, 1725809270.0, 1725809331.0, 1725809392.0, 1725809453.0, 1725809514.0, 1725809575.0, 1725
[2024-09-08 20:50:59] 2024-09-08 18:50:41,753 | INFO     | sum of square deviations: 2406926989.5
[2024-09-08 20:50:59] 2024-09-08 18:50:41,754 | INFO     | sum of deviations: -19045869417.5
[2024-09-08 20:50:59] 2024-09-08 18:50:41,754 | INFO     | mean x: 1725815034.5
[2024-09-08 20:50:59] 2024-09-08 18:50:41,754 | INFO     | mean y: 2366379.47979798
[2024-09-08 20:50:59] 2024-09-08 18:50:41,754 | INFO     | -- intersect: 13658637603.840197
[2024-09-08 20:50:59] 2024-09-08 18:50:41,754 | INFO     | intersect: 13658637603.840197
[2024-09-08 20:50:59] 2024-09-08 18:50:41,754 | INFO     | chi2: 0.17057106182014584
[2024-09-08 20:50:59] 2024-09-08 18:50:41,755 | INFO     | -- intersect: 13658637603.840197
[2024-09-08 20:50:59] 2024-09-08 18:50:41,755 | INFO     | current memory leak: -7.91 B/s (using 198 data points, chi2=0.17)
[2024-09-08 20:50:59] 2024-09-08 18:50:41,755 | INFO     | ..............................
[2024-09-08 20:50:59] 2024-09-08 18:50:41,755 | INFO     | . Timing measurements:
[2024-09-08 20:50:59] 2024-09-08 18:50:41,755 | INFO     | . get job = 0 s
[2024-09-08 20:50:59] 2024-09-08 18:50:41,755 | INFO     | . initial setup = 1 s
[2024-09-08 20:50:59] 2024-09-08 18:50:41,755 | INFO     | . payload setup = 7 s
[2024-09-08 20:50:59] 2024-09-08 18:50:41,756 | INFO     | . stage-in = 0 s
[2024-09-08 20:50:59] 2024-09-08 18:50:41,756 | INFO     | . payload execution = 14236 s
[2024-09-08 20:50:59] 2024-09-08 18:50:41,756 | INFO     | . stage-out = 1 s
[2024-09-08 20:50:59] 2024-09-08 18:50:41,757 | INFO     | . log creation = 0 s
[2024-09-08 20:50:59] 2024-09-08 18:50:41,757 | INFO     | ..............................
[2024-09-08 20:50:59] 2024-09-08 18:50:41,872 | INFO     | 
[2024-09-08 20:50:59] 2024-09-08 18:50:41,872 | INFO     | job summary report
[2024-09-08 20:50:59] 2024-09-08 18:50:41,872 | INFO     | --------------------------------------------------
[2024-09-08 20:50:59] 2024-09-08 18:50:41,872 | INFO     | PanDA job id: 6323232635
[2024-09-08 20:50:59] 2024-09-08 18:50:41,872 | INFO     | task id: 40994252
[2024-09-08 20:50:59] 2024-09-08 18:50:41,872 | INFO     | errors: (none)
[2024-09-08 20:50:59] 2024-09-08 18:50:41,872 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | pilot state: finished 
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | transexitcode: 0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | exeerrorcode: 0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | exeerrordiag: 
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | exitcode: 0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | exitmsg: OK
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | cpuconsumptiontime: 152107 s
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | nevents: 400
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | neventsw: 0
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | pid: 1778090
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | pgrp: 1778090
[2024-09-08 20:50:59] 2024-09-08 18:50:41,873 | INFO     | corecount: 12
[2024-09-08 20:50:59] 2024-09-08 18:50:41,874 | INFO     | event service: False
[2024-09-08 20:50:59] 2024-09-08 18:50:41,874 | INFO     | sizes: {0: 2466008, 1: 2466207, 7: 2466413, 11: 2466441, 14247: 2496882, 14248: 2496881, 14249: 2506027, 14250: 2506083, 14259: 2506253}
[2024-09-08 20:50:59] 2024-09-08 18:50:41,874 | INFO     | --------------------------------------------------
[2024-09-08 20:50:59] 2024-09-08 18:50:41,874 | INFO     | 
[2024-09-08 20:50:59] 2024-09-08 18:50:41,874 | INFO     | executing command: ls -lF /scratch/.boinc/slots/7
[2024-09-08 20:50:59] 2024-09-08 18:50:41,902 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,904 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,904 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,904 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,905 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-08 20:50:59] 2024-09-08 18:50:41,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,905 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-08 20:50:59] 2024-09-08 18:50:41,905 | INFO     | job 6323232635 has completed (purged errors)
[2024-09-08 20:50:59] 2024-09-08 18:50:41,905 | INFO     | overall cleanup function is called
[2024-09-08 20:50:59] 2024-09-08 18:50:42,915 | INFO     | --- collectZombieJob: --- 10, [1778090]
[2024-09-08 20:50:59] 2024-09-08 18:50:42,915 | INFO     | zombie collector waiting for pid 1778090
[2024-09-08 20:50:59] 2024-09-08 18:50:42,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-08 20:50:59] 2024-09-08 18:50:43,920 | INFO     | collected zombie processes
[2024-09-08 20:50:59] 2024-09-08 18:50:43,920 | INFO     | will now attempt to kill all subprocesses of pid=1778090
[2024-09-08 20:50:59] 2024-09-08 18:50:44,071 | INFO     | process IDs to be killed: [1778090] (in reverse order)
[2024-09-08 20:50:59] 2024-09-08 18:50:44,192 | WARNING  | found no corresponding commands to process id(s)
[2024-09-08 20:50:59] 2024-09-08 18:50:44,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-08 20:50:59] 2024-09-08 18:50:44,205 | INFO     | did not find any defunct processes belonging to 1778090
[2024-09-08 20:50:59] 2024-09-08 18:50:44,216 | INFO     | did not find any defunct processes belonging to 1778090
[2024-09-08 20:50:59] 2024-09-08 18:50:44,217 | INFO     | ready for new job
[2024-09-08 20:50:59] 2024-09-08 18:50:44,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-08 20:50:59] 2024-09-08 18:50:44,219 | INFO     | *************************************
[2024-09-08 20:50:59] 2024-09-08 18:50:44,219 | INFO     | ***  PanDA Pilot version 3.7.9.1  ***
[2024-09-08 20:50:59] 2024-09-08 18:50:44,219 | INFO     | *************************************
[2024-09-08 20:50:59] 2024-09-08 18:50:44,220 | INFO     | 
[2024-09-08 20:50:59] 2024-09-08 18:50:44,240 | INFO     | architecture information:
[2024-09-08 20:50:59] 2024-09-08 18:50:44,240 | INFO     | executing command: cat /etc/os-release
[2024-09-08 20:50:59] 2024-09-08 18:50:44,261 | INFO     | cat /etc/os-release:
[2024-09-08 20:50:59] NAME="CentOS Linux"
[2024-09-08 20:50:59] VERSION="7 (Core)"
[2024-09-08 20:50:59] ID="centos"
[2024-09-08 20:50:59] ID_LIKE="rhel fedora"
[2024-09-08 20:50:59] VERSION_ID="7"
[2024-09-08 20:50:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-08 20:50:59] ANSI_COLOR="0;31"
[2024-09-08 20:50:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-08 20:50:59] HOME_URL="https://www.centos.org/"
[2024-09-08 20:50:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-08 20:50:59] 
[2024-09-08 20:50:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-08 20:50:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-08 20:50:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-08 20:50:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-08 20:50:59] 
[2024-09-08 20:50:59] 2024-09-08 18:50:44,262 | INFO     | *************************************
[2024-09-08 20:50:59] 2024-09-08 18:50:44,765 | INFO     | executing command: df -mP /scratch/.boinc/slots/7
[2024-09-08 20:50:59] 2024-09-08 18:50:44,793 | INFO     | sufficient remaining disk space (1670980304896 B)
[2024-09-08 20:50:59] 2024-09-08 18:50:44,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-08 20:50:59] 2024-09-08 18:50:44,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-08 20:50:59] 2024-09-08 18:50:44,794 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-08 20:50:59] 2024-09-08 18:50:44,794 | INFO     | found 0 job(s) in 20 queues
[2024-09-08 20:50:59] 2024-09-08 18:50:44,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-08 20:50:59] 2024-09-08 18:50:44,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-08 20:50:59] 2024-09-08 18:50:44,796 | INFO     | all job control threads have been joined
[2024-09-08 20:50:59] 2024-09-08 18:50:44,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-08 20:50:59] 2024-09-08 18:50:45,265 | INFO     | all data control threads have been joined
[2024-09-08 20:50:59] 2024-09-08 18:50:45,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-08 20:50:59] 2024-09-08 18:50:45,410 | INFO     | aborting loop
[2024-09-08 20:50:59] 2024-09-08 18:50:45,563 | INFO     | all payload control threads have been joined
[2024-09-08 20:50:59] 2024-09-08 18:50:45,799 | INFO     | [job] retrieve thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:45,801 | INFO     | [job] control thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:46,099 | INFO     | [payload] validate_pre thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:46,182 | INFO     | [payload] execute_payloads thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:46,270 | INFO     | [data] control thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:46,317 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:46,414 | INFO     | [job] job monitor thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:46,569 | INFO     | [payload] control thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:46,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-08 20:50:59] 2024-09-08 18:50:46,946 | INFO     | [data] copytool_out thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:46,996 | INFO     | [payload] failed_post thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:47,009 | INFO     | [job] validate thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:47,127 | INFO     | [data] copytool_in thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:47,211 | INFO     | [job] create_data_payload thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:47,297 | INFO     | [payload] validate_post thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:47,675 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-08 20:50:59] 2024-09-08 18:50:47,888 | INFO     | [job] queue monitor thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:51,683 | INFO     | [data] queue_monitor thread has finished
[2024-09-08 20:50:59] 2024-09-08 18:50:53,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140448084989760)>', '<ExcThread(monitor, started 140447737423616)>']
[2024-09-08 20:50:59] 2024-09-08 18:50:53,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-08 20:50:59] 2024-09-08 18:50:53,840 | INFO     | [monitor] control thread has ended
[2024-09-08 20:50:59] 2024-09-08 18:50:58,713 | INFO     | all workflow threads have been joined
[2024-09-08 20:50:59] 2024-09-08 18:50:58,713 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-08 20:50:59] 2024-09-08 18:50:58,714 | INFO     | traces error code: 0
[2024-09-08 20:50:59] 2024-09-08 18:50:58,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-08 20:50:59] 2024-09-08 18:50:58,867 [wrapper] ==== pilot stdout END ====
[2024-09-08 20:50:59] 2024-09-08 18:50:58,871 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-08 20:50:59] 2024-09-08 18:50:58,875 [wrapper] pilotpid: 1771019
[2024-09-08 20:50:59] 2024-09-08 18:50:58,878 [wrapper] Pilot exit status: 0
[2024-09-08 20:50:59] 2024-09-08 18:50:58,894 [wrapper] pandaids: 6323232635
[2024-09-08 20:50:59] 2024-09-08 18:50:58,974 [wrapper] cleanup supervisor_pilot 4172370 1771020
[2024-09-08 20:50:59] 2024-09-08 18:50:58,979 [wrapper] Test setup, not cleaning
[2024-09-08 20:50:59] 2024-09-08 18:50:58,984 [wrapper] ==== wrapper stdout END ====
[2024-09-08 20:50:59] 2024-09-08 18:50:58,988 [wrapper] ==== wrapper stderr END ====
[2024-09-08 20:50:59] 2024-09-08 18:50:58,996 [wrapper] apfmon messages muted
[2024-09-08 20:50:59]  *** Error codes and diagnostics ***
[2024-09-08 20:50:59]     "exeErrorCode": 0,
[2024-09-08 20:50:59]     "exeErrorDiag": "",
[2024-09-08 20:50:59]     "pilotErrorCode": 0,
[2024-09-08 20:50:59]     "pilotErrorDiag": "",
[2024-09-08 20:50:59]  *** Listing of results directory ***
[2024-09-08 20:50:59] total 855864
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc    468654 Sep  7 20:31 pilot3.tar.gz
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc      5654 Sep  7 20:49 queuedata.json
[2024-09-08 20:50:59] -rwx------ 1 boinc boinc     33179 Sep  7 20:51 runpilot2-wrapper.sh
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc       100 Sep  8 16:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-08 20:50:59] -rwxr-xr-x 1 boinc boinc      7986 Sep  8 16:52 run_atlas
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc       105 Sep  8 16:52 job.xml
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc      6664 Sep  8 16:52 init_data.xml
[2024-09-08 20:50:59] -rw-r--r-- 2 boinc boinc 517707131 Sep  8 16:52 EVNT.40994249._001231.pool.root.1
[2024-09-08 20:50:59] -rw-r--r-- 2 boinc boinc     17537 Sep  8 16:52 start_atlas.sh
[2024-09-08 20:50:59] drwxrwx--x 2 boinc boinc      4096 Sep  8 16:52 shared
[2024-09-08 20:50:59] -rw-r--r-- 2 boinc boinc    481591 Sep  8 16:52 input.tar.gz
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc         0 Sep  8 16:52 boinc_lockfile
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc      2575 Sep  8 16:52 pandaJob.out
[2024-09-08 20:50:59] -rw------- 1 boinc boinc       424 Sep  8 16:52 setup.sh.local
[2024-09-08 20:50:59] -rw------- 1 boinc boinc   1009123 Sep  8 16:52 agis_schedconf.cvmfs.json
[2024-09-08 20:50:59] -rw------- 1 boinc boinc   1360150 Sep  8 16:52 cric_ddmendpoints.json
[2024-09-08 20:50:59] drwx------ 4 boinc boinc      4096 Sep  8 16:52 pilot3
[2024-09-08 20:50:59] -rw------- 1 boinc boinc 351421791 Sep  8 20:49 HITS.40994252._075727.pool.root.1
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc       533 Sep  8 20:49 boinc_task_state.xml
[2024-09-08 20:50:59] -rw------- 1 boinc boinc      1024 Sep  8 20:50 memory_monitor_summary.json
[2024-09-08 20:50:59] -rw------- 1 boinc boinc        95 Sep  8 20:50 pilot_heartbeat.json
[2024-09-08 20:50:59] -rw------- 1 boinc boinc         0 Sep  8 20:50 agis_ddmendpoints.agis.ALL.json
[2024-09-08 20:50:59] -rw------- 1 boinc boinc    464723 Sep  8 20:50 log.40994252._075727.job.log.tgz.1
[2024-09-08 20:50:59] -rw------- 1 boinc boinc      7705 Sep  8 20:50 heartbeat.json
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc      8192 Sep  8 20:50 boinc_mmap_file
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc        29 Sep  8 20:50 wrapper_checkpoint.txt
[2024-09-08 20:50:59] -rw------- 1 boinc boinc      4337 Sep  8 20:50 pilotlog.txt
[2024-09-08 20:50:59] -rw------- 1 boinc boinc   1385634 Sep  8 20:50 log.40994252._075727.job.log.1
[2024-09-08 20:50:59] -rw------- 1 boinc boinc       357 Sep  8 20:50 output.list
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc       620 Sep  8 20:50 runtime_log
[2024-09-08 20:50:59] -rw------- 1 boinc boinc   1873920 Sep  8 20:50 result.tar.gz
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc     11065 Sep  8 20:50 runtime_log.err
[2024-09-08 20:50:59] -rw------- 1 boinc boinc       658 Sep  8 20:50 qgSLDmghF75nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmfsTKDmygmstm.diag
[2024-09-08 20:50:59] -rw-r--r-- 1 boinc boinc     21577 Sep  8 20:50 stderr.txt
[2024-09-08 20:50:59] HITS file was successfully produced:
[2024-09-08 20:50:59] -rw------- 1 boinc boinc 351421791 Sep  8 20:49 shared/HITS.pool.root.1
[2024-09-08 20:50:59]  *** Contents of shared directory: ***
[2024-09-08 20:50:59] total 851096
[2024-09-08 20:50:59] -rw-r--r-- 2 boinc boinc 517707131 Sep  8 16:52 ATLAS.root_0
[2024-09-08 20:50:59] -rw-r--r-- 2 boinc boinc     17537 Sep  8 16:52 start_atlas.sh
[2024-09-08 20:50:59] -rw-r--r-- 2 boinc boinc    481591 Sep  8 16:52 input.tar.gz
[2024-09-08 20:50:59] -rw------- 1 boinc boinc 351421791 Sep  8 20:49 HITS.pool.root.1
[2024-09-08 20:50:59] -rw------- 1 boinc boinc   1873920 Sep  8 20:50 result.tar.gz
20:51:01 (1767004): run_atlas exited; CPU time 151799.807151
20:51:01 (1767004): called boinc_finish(0)

</stderr_txt>
]]>

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