Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
08:10:33 (4174950): wrapper (7.7.26015): starting
08:10:33 (4174950): wrapper: running run_atlas (--nthreads 12)
[2024-09-08 08:10:33] Arguments: --nthreads 12
[2024-09-08 08:10:33] Threads: 12
[2024-09-08 08:10:33] Checking for CVMFS
[2024-09-08 08:10:35] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-08 08:10:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-08 08:10:35] Running cvmfs_config stat atlas.cern.ch
[2024-09-08 08:10:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-08 08:10:37] 2.11.3.0 784444 13175 125480 137006 2 56 2544202 4096000 17322 130560 0 149768956 99.999 2357929 1062 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.181:3128 1
[2024-09-08 08:10:37] CVMFS is ok
[2024-09-08 08:10:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-08 08:10:38] Checking for apptainer binary...
[2024-09-08 08:10:38] apptainer is not installed, using version from CVMFS
[2024-09-08 08:10:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-08 08:10:39] epyc7v12
[2024-09-08 08:10:39] apptainer works
[2024-09-08 08:10:39] Set ATHENA_PROC_NUMBER=12
[2024-09-08 08:10:39] Set ATHENA_CORE_NUMBER=12
[2024-09-08 08:10:40] Starting ATLAS job with PandaID=6323179637
[2024-09-08 08:10:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-08 16:26:01]  *** The last 200 lines of the pilot log: ***
[2024-09-08 16:26:01] 2024-09-08 16:25:43,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-08 16:26:01] 2024-09-08 16:25:43,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-08 16:26:01] 2024-09-08 16:25:43,311 | INFO     | fitting pss+swap vs Time
[2024-09-08 16:26:01] 2024-09-08 16:25:43,312 | INFO     | model: linear, x: [1725783395.0, 1725783456.0, 1725783517.0, 1725783578.0, 1725783639.0, 1725783700.0, 1725783761.0, 1725783822.0, 1725783883.0, 1725783944.0, 1725
[2024-09-08 16:26:01] 2024-09-08 16:25:43,312 | INFO     | sum of square deviations: 34507451980.89863
[2024-09-08 16:26:01] 2024-09-08 16:25:43,339 | INFO     | sum of deviations: 307965826876.5315
[2024-09-08 16:26:01] 2024-09-08 16:25:43,339 | INFO     | mean x: 1725798035.014553
[2024-09-08 16:26:01] 2024-09-08 16:25:43,339 | INFO     | mean y: 2675148.638253638
[2024-09-08 16:26:01] 2024-09-08 16:25:43,339 | INFO     | -- intersect: -15399413048.698109
[2024-09-08 16:26:01] 2024-09-08 16:25:43,340 | INFO     | intersect: -15399413048.698109
[2024-09-08 16:26:01] 2024-09-08 16:25:43,340 | INFO     | chi2: 7.082795293596184
[2024-09-08 16:26:01] 2024-09-08 16:25:43,341 | INFO     | model: linear, x: [1725783395.0, 1725783456.0, 1725783517.0, 1725783578.0, 1725783639.0, 1725783700.0, 1725783761.0, 1725783822.0, 1725783883.0, 1725783944.0, 1725
[2024-09-08 16:26:01] 2024-09-08 16:25:43,341 | INFO     | sum of square deviations: 33442456212.924328
[2024-09-08 16:26:01] 2024-09-08 16:25:43,352 | INFO     | sum of deviations: 371132144854.96686
[2024-09-08 16:26:01] 2024-09-08 16:25:43,352 | INFO     | mean x: 1725797882.512605
[2024-09-08 16:26:01] 2024-09-08 16:25:43,352 | INFO     | mean y: 2684133.4222689075
[2024-09-08 16:26:01] 2024-09-08 16:25:43,352 | INFO     | -- intersect: -19149589421.040306
[2024-09-08 16:26:01] 2024-09-08 16:25:43,353 | INFO     | intersect: -19149589421.040306
[2024-09-08 16:26:01] 2024-09-08 16:25:43,357 | INFO     | chi2: 5.688869484356085
[2024-09-08 16:26:01] 2024-09-08 16:25:43,357 | INFO     | current chi2=5.688869484356085 (change=19.680447499314262 %)
[2024-09-08 16:26:01] 2024-09-08 16:25:43,358 | INFO     | right removable region: 475
[2024-09-08 16:26:01] 2024-09-08 16:25:43,358 | INFO     | model: linear, x: [1725783700.0, 1725783761.0, 1725783822.0, 1725783883.0, 1725783944.0, 1725784005.0, 1725784066.0, 1725784127.0, 1725784188.0, 1725784249.0, 1725
[2024-09-08 16:26:01] 2024-09-08 16:25:43,359 | INFO     | sum of square deviations: 33442481040.897163
[2024-09-08 16:26:01] 2024-09-08 16:25:43,373 | INFO     | sum of deviations: 138199742513.92627
[2024-09-08 16:26:01] 2024-09-08 16:25:43,373 | INFO     | mean x: 1725798187.514706
[2024-09-08 16:26:01] 2024-09-08 16:25:43,373 | INFO     | mean y: 2699442.5105042015
[2024-09-08 16:26:01] 2024-09-08 16:25:43,373 | INFO     | -- intersect: -7129093944.883897
[2024-09-08 16:26:01] 2024-09-08 16:25:43,374 | INFO     | intersect: -7129093944.883897
[2024-09-08 16:26:01] 2024-09-08 16:25:43,374 | INFO     | chi2: 3.1380910148129213
[2024-09-08 16:26:01] 2024-09-08 16:25:43,374 | INFO     | current chi2=3.1380910148129213 (change=55.694173207996215 %)
[2024-09-08 16:26:01] 2024-09-08 16:25:43,375 | INFO     | model: linear, x: [1725784005.0, 1725784066.0, 1725784127.0, 1725784188.0, 1725784249.0, 1725784310.0, 1725784371.0, 1725784432.0, 1725784493.0, 1725784554.0, 1725
[2024-09-08 16:26:01] 2024-09-08 16:25:43,375 | INFO     | sum of square deviations: 32399650050.89613
[2024-09-08 16:26:01] 2024-09-08 16:25:43,390 | INFO     | sum of deviations: 36800746538.707016
[2024-09-08 16:26:01] 2024-09-08 16:25:43,390 | INFO     | mean x: 1725798340.014862
[2024-09-08 16:26:01] 2024-09-08 16:25:43,390 | INFO     | mean y: 2714257.1847133758
[2024-09-08 16:26:01] 2024-09-08 16:25:43,390 | INFO     | -- intersect: -1957512695.5150928
[2024-09-08 16:26:01] 2024-09-08 16:25:43,390 | INFO     | intersect: -1957512695.5150928
[2024-09-08 16:26:01] 2024-09-08 16:25:43,391 | INFO     | chi2: 1.7800588007198117
[2024-09-08 16:26:01] 2024-09-08 16:25:43,391 | INFO     | current chi2=1.7800588007198117 (change=43.27574336380646 %)
[2024-09-08 16:26:01] 2024-09-08 16:25:43,392 | INFO     | model: linear, x: [1725784310.0, 1725784371.0, 1725784432.0, 1725784493.0, 1725784554.0, 1725784615.0, 1725784676.0, 1725784737.0, 1725784798.0, 1725784859.0, 1725
[2024-09-08 16:26:01] 2024-09-08 16:25:43,392 | INFO     | sum of square deviations: 31378726448.394806
[2024-09-08 16:26:01] 2024-09-08 16:25:43,406 | INFO     | sum of deviations: 296368262.0943947
[2024-09-08 16:26:01] 2024-09-08 16:25:43,407 | INFO     | mean x: 1725798492.5150216
[2024-09-08 16:26:01] 2024-09-08 16:25:43,407 | INFO     | mean y: 2719701.557939914
[2024-09-08 16:26:01] 2024-09-08 16:25:43,407 | INFO     | -- intersect: -13580255.701095618
[2024-09-08 16:26:01] 2024-09-08 16:25:43,407 | INFO     | intersect: -13580255.701095618
[2024-09-08 16:26:01] 2024-09-08 16:25:43,408 | INFO     | chi2: 1.6021008186865675
[2024-09-08 16:26:01] 2024-09-08 16:25:43,408 | INFO     | current chi2=1.6021008186865675 (change=9.997309187835953 %)
[2024-09-08 16:26:01] 2024-09-08 16:25:43,408 | INFO     | left removable region: 30
[2024-09-08 16:26:01] 2024-09-08 16:25:43,408 | INFO     | model: linear, x: [1725785225.0, 1725785286.0, 1725785347.0, 1725785408.0, 1725785469.0, 1725785530.0, 1725785591.0, 1725785652.0, 1725785713.0, 1725785774.0, 1725
[2024-09-08 16:26:01] 2024-09-08 16:25:43,417 | INFO     | sum of square deviations: 27324805313.919037
[2024-09-08 16:26:01] 2024-09-08 16:25:43,435 | INFO     | sum of deviations: 24147622490.47419
[2024-09-08 16:26:01] 2024-09-08 16:25:43,435 | INFO     | mean x: 1725798767.013483
[2024-09-08 16:26:01] 2024-09-08 16:25:43,435 | INFO     | mean y: 2735759.0876404494
[2024-09-08 16:26:01] 2024-09-08 16:25:43,435 | INFO     | -- intersect: -1522396319.3150935
[2024-09-08 16:26:01] 2024-09-08 16:25:43,435 | INFO     | intersect: -1522396319.3150935
[2024-09-08 16:26:01] 2024-09-08 16:25:43,436 | INFO     | chi2: 0.011047146879923494
[2024-09-08 16:26:01] 2024-09-08 16:25:43,436 | INFO     | -- intersect: -1522396319.3150935
[2024-09-08 16:26:01] 2024-09-08 16:25:43,436 | INFO     | current memory leak: 0.88 B/s (using 445 data points, chi2=0.01)
[2024-09-08 16:26:01] 2024-09-08 16:25:43,437 | INFO     | ..............................
[2024-09-08 16:26:01] 2024-09-08 16:25:43,437 | INFO     | . Timing measurements:
[2024-09-08 16:26:01] 2024-09-08 16:25:43,437 | INFO     | . get job = 0 s
[2024-09-08 16:26:01] 2024-09-08 16:25:43,437 | INFO     | . initial setup = 17 s
[2024-09-08 16:26:01] 2024-09-08 16:25:43,437 | INFO     | . payload setup = 70 s
[2024-09-08 16:26:01] 2024-09-08 16:25:43,438 | INFO     | . stage-in = 0 s
[2024-09-08 16:26:01] 2024-09-08 16:25:43,438 | INFO     | . payload execution = 29335 s
[2024-09-08 16:26:01] 2024-09-08 16:25:43,438 | INFO     | . stage-out = 3 s
[2024-09-08 16:26:01] 2024-09-08 16:25:43,438 | INFO     | . log creation = 1 s
[2024-09-08 16:26:01] 2024-09-08 16:25:43,438 | INFO     | ..............................
[2024-09-08 16:26:01] 2024-09-08 16:25:43,736 | INFO     | 
[2024-09-08 16:26:01] 2024-09-08 16:25:43,736 | INFO     | job summary report
[2024-09-08 16:26:01] 2024-09-08 16:25:43,736 | INFO     | --------------------------------------------------
[2024-09-08 16:26:01] 2024-09-08 16:25:43,736 | INFO     | PanDA job id: 6323179637
[2024-09-08 16:26:01] 2024-09-08 16:25:43,736 | INFO     | task id: 40994252
[2024-09-08 16:26:01] 2024-09-08 16:25:43,736 | INFO     | errors: (none)
[2024-09-08 16:26:01] 2024-09-08 16:25:43,737 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-08 16:26:01] 2024-09-08 16:25:43,737 | INFO     | pilot state: finished 
[2024-09-08 16:26:01] 2024-09-08 16:25:43,737 | INFO     | transexitcode: 0
[2024-09-08 16:26:01] 2024-09-08 16:25:43,737 | INFO     | exeerrorcode: 0
[2024-09-08 16:26:01] 2024-09-08 16:25:43,737 | INFO     | exeerrordiag: 
[2024-09-08 16:26:01] 2024-09-08 16:25:43,737 | INFO     | exitcode: 0
[2024-09-08 16:26:01] 2024-09-08 16:25:43,737 | INFO     | exitmsg: OK
[2024-09-08 16:26:01] 2024-09-08 16:25:43,737 | INFO     | cpuconsumptiontime: 190230 s
[2024-09-08 16:26:01] 2024-09-08 16:25:43,737 | INFO     | nevents: 400
[2024-09-08 16:26:01] 2024-09-08 16:25:43,737 | INFO     | neventsw: 0
[2024-09-08 16:26:01] 2024-09-08 16:25:43,737 | INFO     | pid: 4484
[2024-09-08 16:26:01] 2024-09-08 16:25:43,738 | INFO     | pgrp: 4484
[2024-09-08 16:26:01] 2024-09-08 16:25:43,738 | INFO     | corecount: 12
[2024-09-08 16:26:01] 2024-09-08 16:25:43,738 | INFO     | event service: False
[2024-09-08 16:26:01] 2024-09-08 16:25:43,738 | INFO     | sizes: {0: 2465295, 1: 2466230, 2: 2466258, 13: 2466258, 24: 2466314, 34: 2466342, 45: 2466498, 55: 2466732, 56: 2466760, 29410: 2503113, 29416: 2512457, 29470: 25
[2024-09-08 16:26:01] 2024-09-08 16:25:43,738 | INFO     | --------------------------------------------------
[2024-09-08 16:26:01] 2024-09-08 16:25:43,738 | INFO     | 
[2024-09-08 16:26:01] 2024-09-08 16:25:43,738 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/11
[2024-09-08 16:26:01] 2024-09-08 16:25:43,937 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,938 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,938 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,938 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,938 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,939 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,939 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,939 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-08 16:26:01] 2024-09-08 16:25:43,939 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,939 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-08 16:26:01] 2024-09-08 16:25:43,940 | INFO     | job 6323179637 has completed (purged errors)
[2024-09-08 16:26:01] 2024-09-08 16:25:43,940 | INFO     | overall cleanup function is called
[2024-09-08 16:26:01] 2024-09-08 16:25:44,953 | INFO     | --- collectZombieJob: --- 10, [4484]
[2024-09-08 16:26:01] 2024-09-08 16:25:44,953 | INFO     | zombie collector waiting for pid 4484
[2024-09-08 16:26:01] 2024-09-08 16:25:44,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-08 16:26:01] 2024-09-08 16:25:45,957 | INFO     | collected zombie processes
[2024-09-08 16:26:01] 2024-09-08 16:25:45,957 | INFO     | will now attempt to kill all subprocesses of pid=4484
[2024-09-08 16:26:01] 2024-09-08 16:25:46,537 | INFO     | process IDs to be killed: [4484] (in reverse order)
[2024-09-08 16:26:01] 2024-09-08 16:25:48,685 | WARNING  | found no corresponding commands to process id(s)
[2024-09-08 16:26:01] 2024-09-08 16:25:48,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-08 16:26:01] 2024-09-08 16:25:48,702 | INFO     | did not find any defunct processes belonging to 4484
[2024-09-08 16:26:01] 2024-09-08 16:25:48,719 | INFO     | did not find any defunct processes belonging to 4484
[2024-09-08 16:26:01] 2024-09-08 16:25:48,719 | INFO     | ready for new job
[2024-09-08 16:26:01] 2024-09-08 16:25:48,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-08 16:26:01] 2024-09-08 16:25:48,723 | INFO     | *************************************
[2024-09-08 16:26:01] 2024-09-08 16:25:48,723 | INFO     | ***  PanDA Pilot version 3.7.9.1  ***
[2024-09-08 16:26:01] 2024-09-08 16:25:48,723 | INFO     | *************************************
[2024-09-08 16:26:01] 2024-09-08 16:25:48,723 | INFO     | 
[2024-09-08 16:26:01] 2024-09-08 16:25:48,760 | INFO     | architecture information:
[2024-09-08 16:26:01] 2024-09-08 16:25:48,773 | INFO     | executing command: cat /etc/os-release
[2024-09-08 16:26:01] 2024-09-08 16:25:48,853 | INFO     | cat /etc/os-release:
[2024-09-08 16:26:01] NAME="CentOS Linux"
[2024-09-08 16:26:01] VERSION="7 (Core)"
[2024-09-08 16:26:01] ID="centos"
[2024-09-08 16:26:01] ID_LIKE="rhel fedora"
[2024-09-08 16:26:01] VERSION_ID="7"
[2024-09-08 16:26:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-08 16:26:01] ANSI_COLOR="0;31"
[2024-09-08 16:26:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-08 16:26:01] HOME_URL="https://www.centos.org/"
[2024-09-08 16:26:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-08 16:26:01] 
[2024-09-08 16:26:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-08 16:26:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-08 16:26:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-08 16:26:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-08 16:26:01] 
[2024-09-08 16:26:01] 2024-09-08 16:25:48,854 | INFO     | *************************************
[2024-09-08 16:26:01] 2024-09-08 16:25:49,121 | INFO     | 29603s have passed since pilot start
[2024-09-08 16:26:01] 2024-09-08 16:25:49,357 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/11
[2024-09-08 16:26:01] 2024-09-08 16:25:49,438 | INFO     | sufficient remaining disk space (300765151232 B)
[2024-09-08 16:26:01] 2024-09-08 16:25:49,439 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-08 16:26:01] 2024-09-08 16:25:49,439 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-08 16:26:01] 2024-09-08 16:25:49,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-08 16:26:01] 2024-09-08 16:25:49,439 | INFO     | aborting loop
[2024-09-08 16:26:01] 2024-09-08 16:25:49,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-08 16:26:01] 2024-09-08 16:25:49,473 | INFO     | all job control threads have been joined
[2024-09-08 16:26:01] 2024-09-08 16:25:49,693 | INFO     | all payload control threads have been joined
[2024-09-08 16:26:01] 2024-09-08 16:25:49,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-08 16:26:01] 2024-09-08 16:25:50,005 | INFO     | all data control threads have been joined
[2024-09-08 16:26:01] 2024-09-08 16:25:50,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-08 16:26:01] 2024-09-08 16:25:50,125 | INFO     | found 0 job(s) in 20 queues
[2024-09-08 16:26:01] 2024-09-08 16:25:50,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-08 16:26:01] 2024-09-08 16:25:50,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-08 16:26:01] 2024-09-08 16:25:50,445 | INFO     | [job] retrieve thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:50,449 | INFO     | [job] job monitor thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:50,450 | INFO     | [job] queue monitor thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:50,481 | INFO     | [job] validate thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:50,482 | INFO     | [job] control thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:50,569 | INFO     | [job] create_data_payload thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:50,573 | INFO     | [data] copytool_in thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:50,701 | INFO     | [payload] control thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:50,729 | INFO     | [payload] validate_post thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:50,777 | INFO     | [payload] execute_payloads thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:51,009 | INFO     | [data] control thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:51,473 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:51,517 | INFO     | [payload] failed_post thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:51,757 | INFO     | [payload] validate_pre thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:51,949 | INFO     | [data] copytool_out thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:54,101 | INFO     | [data] queue_monitor thread has finished
[2024-09-08 16:26:01] 2024-09-08 16:25:54,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627713554240)>', '<ExcThread(monitor, started 139627272845056)>']
[2024-09-08 16:26:01] 2024-09-08 16:25:55,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-08 16:26:01] 2024-09-08 16:25:55,153 | INFO     | [monitor] control thread has ended
[2024-09-08 16:26:01] 2024-09-08 16:25:59,225 | INFO     | all workflow threads have been joined
[2024-09-08 16:26:01] 2024-09-08 16:25:59,225 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-08 16:26:01] 2024-09-08 16:25:59,226 | INFO     | traces error code: 0
[2024-09-08 16:26:01] 2024-09-08 16:25:59,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-08 16:26:01] 2024-09-08 16:25:59,641 [wrapper] ==== pilot stdout END ====
[2024-09-08 16:26:01] 2024-09-08 16:25:59,677 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-08 16:26:01] 2024-09-08 16:25:59,703 [wrapper] pilotpid: 4183825
[2024-09-08 16:26:01] 2024-09-08 16:25:59,723 [wrapper] Pilot exit status: 0
[2024-09-08 16:26:01] 2024-09-08 16:25:59,854 [wrapper] pandaids: 6323179637
[2024-09-08 16:26:01] 2024-09-08 16:26:00,177 [wrapper] cleanup supervisor_pilot 1179807 4183826
[2024-09-08 16:26:01] 2024-09-08 16:26:00,217 [wrapper] Test setup, not cleaning
[2024-09-08 16:26:01] 2024-09-08 16:26:00,242 [wrapper] ==== wrapper stdout END ====
[2024-09-08 16:26:01] 2024-09-08 16:26:00,269 [wrapper] ==== wrapper stderr END ====
[2024-09-08 16:26:01] 2024-09-08 16:26:00,325 [wrapper] apfmon messages muted
[2024-09-08 16:26:01]  *** Error codes and diagnostics ***
[2024-09-08 16:26:01]     "exeErrorCode": 0,
[2024-09-08 16:26:01]     "exeErrorDiag": "",
[2024-09-08 16:26:01]     "pilotErrorCode": 0,
[2024-09-08 16:26:01]     "pilotErrorDiag": "",
[2024-09-08 16:26:01]  *** Listing of results directory ***
[2024-09-08 16:26:01] total 864284
[2024-09-08 16:26:01] -rw-r--r-- 1 boinc boinc    468654 Sep  7 17:35 pilot3.tar.gz
[2024-09-08 16:26:01] -rwx------ 1 boinc boinc     33179 Sep  7 18:05 runpilot2-wrapper.sh
[2024-09-08 16:26:01] -rw-r--r-- 1 boinc boinc      5654 Sep  7 18:05 queuedata.json
[2024-09-08 16:26:01] -rw-rw-r-- 1 boinc boinc       100 Sep  8 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-08 16:26:01] -rwxr-xr-x 1 boinc boinc      7986 Sep  8 08:10 run_atlas
[2024-09-08 16:26:01] -rw-rw-r-- 1 boinc boinc       105 Sep  8 08:10 job.xml
[2024-09-08 16:26:01] -rw-r--r-- 2 boinc boinc     17537 Sep  8 08:10 start_atlas.sh
[2024-09-08 16:26:01] drwxrwx--x 2 boinc boinc      4096 Sep  8 08:10 shared
[2024-09-08 16:26:01] -rw-r--r-- 2 boinc boinc    481583 Sep  8 08:10 input.tar.gz
[2024-09-08 16:26:01] -rw-rw-r-- 1 boinc boinc      6956 Sep  8 08:10 init_data.xml
[2024-09-08 16:26:01] -rw-r--r-- 2 boinc boinc 515355149 Sep  8 08:10 EVNT.40994249._002325.pool.root.1
[2024-09-08 16:26:01] -rw-rw-r-- 1 boinc boinc         0 Sep  8 08:10 boinc_lockfile
[2024-09-08 16:26:01] -rw-rw-r-- 1 boinc boinc      2575 Sep  8 08:10 pandaJob.out
[2024-09-08 16:26:01] -rw------- 1 boinc boinc       460 Sep  8 08:10 setup.sh.local
[2024-09-08 16:26:01] -rw------- 1 boinc boinc   1009139 Sep  8 08:12 agis_schedconf.cvmfs.json
[2024-09-08 16:26:01] -rw------- 1 boinc boinc   1360150 Sep  8 08:12 cric_ddmendpoints.json
[2024-09-08 16:26:01] drwx------ 4 boinc boinc      4096 Sep  8 08:12 pilot3
[2024-09-08 16:26:01] -rw------- 1 boinc boinc 358213886 Sep  8 16:22 HITS.40994252._075441.pool.root.1
[2024-09-08 16:26:01] -rw-rw-r-- 1 boinc boinc       533 Sep  8 16:23 boinc_task_state.xml
[2024-09-08 16:26:01] -rw------- 1 boinc boinc      1026 Sep  8 16:24 memory_monitor_summary.json
[2024-09-08 16:26:01] -rw------- 1 boinc boinc         0 Sep  8 16:24 agis_ddmendpoints.agis.ALL.json
[2024-09-08 16:26:01] -rw------- 1 boinc boinc    617600 Sep  8 16:24 log.40994252._075441.job.log.tgz.1
[2024-09-08 16:26:01] -rw------- 1 boinc boinc        95 Sep  8 16:24 pilot_heartbeat.json
[2024-09-08 16:26:01] -rw------- 1 boinc boinc      7662 Sep  8 16:25 heartbeat.json
[2024-09-08 16:26:01] -rw------- 1 boinc boinc      4310 Sep  8 16:25 pilotlog.txt
[2024-09-08 16:26:01] -rw-rw-r-- 1 boinc boinc        29 Sep  8 16:25 wrapper_checkpoint.txt
[2024-09-08 16:26:01] -rw-rw-r-- 1 boinc boinc      8192 Sep  8 16:25 boinc_mmap_file
[2024-09-08 16:26:01] -rw------- 1 boinc boinc   3326864 Sep  8 16:26 log.40994252._075441.job.log.1
[2024-09-08 16:26:01] -rw------- 1 boinc boinc       357 Sep  8 16:26 output.list
[2024-09-08 16:26:01] -rw-rw-r-- 1 boinc boinc       620 Sep  8 16:26 runtime_log
[2024-09-08 16:26:01] -rw------- 1 boinc boinc   3962880 Sep  8 16:26 result.tar.gz
[2024-09-08 16:26:01] -rw-rw-r-- 1 boinc boinc     11777 Sep  8 16:26 runtime_log.err
[2024-09-08 16:26:01] -rw------- 1 boinc boinc       648 Sep  8 16:26 SKaLDmYzE75nsSi4ap6QjLDmwznN0nGgGQJmDC4LDm3pTKDmfy7l1m.diag
[2024-09-08 16:26:01] -rw-rw-r-- 1 boinc boinc     21398 Sep  8 16:26 stderr.txt
[2024-09-08 16:26:01] HITS file was successfully produced:
[2024-09-08 16:26:01] -rw------- 1 boinc boinc 358213886 Sep  8 16:22 shared/HITS.pool.root.1
[2024-09-08 16:26:01]  *** Contents of shared directory: ***
[2024-09-08 16:26:01] total 857472
[2024-09-08 16:26:01] -rw-r--r-- 2 boinc boinc     17537 Sep  8 08:10 start_atlas.sh
[2024-09-08 16:26:01] -rw-r--r-- 2 boinc boinc    481583 Sep  8 08:10 input.tar.gz
[2024-09-08 16:26:01] -rw-r--r-- 2 boinc boinc 515355149 Sep  8 08:10 ATLAS.root_0
[2024-09-08 16:26:01] -rw------- 1 boinc boinc 358213886 Sep  8 16:22 HITS.pool.root.1
[2024-09-08 16:26:01] -rw------- 1 boinc boinc   3962880 Sep  8 16:26 result.tar.gz
16:26:02 (4174950): run_atlas exited; CPU time 189600.965152
16:26:02 (4174950): called boinc_finish(0)

</stderr_txt>
]]>

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