Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:52:51 (4047788): wrapper (7.7.26015): starting
13:52:51 (4047788): wrapper: running run_atlas (--nthreads 12)
[2024-09-08 13:52:51] Arguments: --nthreads 12
[2024-09-08 13:52:51] Threads: 12
[2024-09-08 13:52:51] Checking for CVMFS
[2024-09-08 13:52:51] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-08 13:52:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-08 13:52:51] Running cvmfs_config stat atlas.cern.ch
[2024-09-08 13:52:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-08 13:52:51] 2.11.4.0 3281645 24758 238636 137013 3 56 37892972 46080000 6447 130560 0 159987832 99.888 47219823 19636 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-09-08 13:52:51] CVMFS is ok
[2024-09-08 13:52:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-08 13:52:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-08 13:52:51] Further information can be found at the LHC@home message board.
[2024-09-08 13:52:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-08 13:52:51] Checking for apptainer binary...
[2024-09-08 13:52:51] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-08 13:52:51] Running /usr/bin/apptainer --version
[2024-09-08 13:52:51] apptainer version 1.3.3-1.el9
[2024-09-08 13:52:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-08 13:52:52] mff2102.farm.particle.cz
[2024-09-08 13:52:52] apptainer works
[2024-09-08 13:52:52] Set ATHENA_PROC_NUMBER=12
[2024-09-08 13:52:52] Set ATHENA_CORE_NUMBER=12
[2024-09-08 13:52:52] Starting ATLAS job with PandaID=6323094686
[2024-09-08 13:52:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-08 17:42:57]  *** The last 200 lines of the pilot log: ***
[2024-09-08 17:42:57] 2024-09-08 15:42:42,235 | INFO     | -- intersect: -46719211666.22575
[2024-09-08 17:42:57] 2024-09-08 15:42:42,235 | INFO     | intersect: -46719211666.22575
[2024-09-08 17:42:57] 2024-09-08 15:42:42,235 | INFO     | chi2: 4.909284363393799
[2024-09-08 17:42:57] 2024-09-08 15:42:42,236 | INFO     | model: linear, x: [1725796414.0, 1725796475.0, 1725796536.0, 1725796597.0, 1725796658.0, 1725796719.0, 1725796780.0, 1725796841.0, 1725796902.0, 1725796963.0, 1725
[2024-09-08 17:42:57] 2024-09-08 15:42:42,236 | INFO     | sum of square deviations: 3346927870.0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,237 | INFO     | sum of deviations: 109859708813.0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,237 | INFO     | mean x: 1725803124.0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,237 | INFO     | mean y: 2300452.606334842
[2024-09-08 17:42:57] 2024-09-08 15:42:42,238 | INFO     | -- intersect: -56645537814.432785
[2024-09-08 17:42:57] 2024-09-08 15:42:42,238 | INFO     | intersect: -56645537814.432785
[2024-09-08 17:42:57] 2024-09-08 15:42:42,238 | INFO     | chi2: 4.183095327449745
[2024-09-08 17:42:57] 2024-09-08 15:42:42,238 | INFO     | current chi2=4.183095327449745 (change=14.792156701267913 %)
[2024-09-08 17:42:57] 2024-09-08 15:42:42,238 | INFO     | right removable region: 220
[2024-09-08 17:42:57] 2024-09-08 15:42:42,238 | INFO     | model: linear, x: [1725796719.0, 1725796780.0, 1725796841.0, 1725796902.0, 1725796963.0, 1725797024.0, 1725797085.0, 1725797146.0, 1725797207.0, 1725797268.0, 1725
[2024-09-08 17:42:57] 2024-09-08 15:42:42,239 | INFO     | sum of square deviations: 3346927870.0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,240 | INFO     | sum of deviations: 48334187164.0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,240 | INFO     | mean x: 1725803429.0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,240 | INFO     | mean y: 2323874.6787330317
[2024-09-08 17:42:57] 2024-09-08 15:42:42,240 | INFO     | -- intersect: -24920623133.90409
[2024-09-08 17:42:57] 2024-09-08 15:42:42,240 | INFO     | intersect: -24920623133.90409
[2024-09-08 17:42:57] 2024-09-08 15:42:42,241 | INFO     | chi2: 2.747816043463418
[2024-09-08 17:42:57] 2024-09-08 15:42:42,241 | INFO     | current chi2=2.747816043463418 (change=44.02817518674256 %)
[2024-09-08 17:42:57] 2024-09-08 15:42:42,241 | INFO     | model: linear, x: [1725797024.0, 1725797085.0, 1725797146.0, 1725797207.0, 1725797268.0, 1725797329.0, 1725797390.0, 1725797451.0, 1725797512.0, 1725797573.0, 1725
[2024-09-08 17:42:57] 2024-09-08 15:42:42,241 | INFO     | sum of square deviations: 3124858590.0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,243 | INFO     | sum of deviations: 9531458955.499994
[2024-09-08 17:42:57] 2024-09-08 15:42:42,243 | INFO     | mean x: 1725803581.5
[2024-09-08 17:42:57] 2024-09-08 15:42:42,243 | INFO     | mean y: 2350549.8657407407
[2024-09-08 17:42:57] 2024-09-08 15:42:42,243 | INFO     | -- intersect: -5261703975.6614895
[2024-09-08 17:42:57] 2024-09-08 15:42:42,243 | INFO     | intersect: -5261703975.6614895
[2024-09-08 17:42:57] 2024-09-08 15:42:42,243 | INFO     | chi2: 1.501258098682176
[2024-09-08 17:42:57] 2024-09-08 15:42:42,244 | INFO     | current chi2=1.501258098682176 (change=45.36540747502327 %)
[2024-09-08 17:42:57] 2024-09-08 15:42:42,244 | INFO     | model: linear, x: [1725797329.0, 1725797390.0, 1725797451.0, 1725797512.0, 1725797573.0, 1725797634.0, 1725797695.0, 1725797756.0, 1725797817.0, 1725797878.0, 1725
[2024-09-08 17:42:57] 2024-09-08 15:42:42,245 | INFO     | sum of square deviations: 2912836010.0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,246 | INFO     | sum of deviations: -14102595612.0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,246 | INFO     | mean x: 1725803734.0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,246 | INFO     | mean y: 2367499.5639810427
[2024-09-08 17:42:57] 2024-09-08 15:42:42,246 | INFO     | -- intersect: 8357905567.181326
[2024-09-08 17:42:57] 2024-09-08 15:42:42,246 | INFO     | intersect: 8357905567.181326
[2024-09-08 17:42:57] 2024-09-08 15:42:42,247 | INFO     | chi2: 0.9954230421420899
[2024-09-08 17:42:57] 2024-09-08 15:42:42,247 | INFO     | current chi2=0.9954230421420899 (change=33.69407678693722 %)
[2024-09-08 17:42:57] 2024-09-08 15:42:42,247 | INFO     | model: linear, x: [1725797634.0, 1725797695.0, 1725797756.0, 1725797817.0, 1725797878.0, 1725797939.0, 1725798000.0, 1725798061.0, 1725798122.0, 1725798183.0, 1725
[2024-09-08 17:42:57] 2024-09-08 15:42:42,247 | INFO     | sum of square deviations: 2710627567.5
[2024-09-08 17:42:57] 2024-09-08 15:42:42,249 | INFO     | sum of deviations: -19162728642.5
[2024-09-08 17:42:57] 2024-09-08 15:42:42,249 | INFO     | mean x: 1725803886.5
[2024-09-08 17:42:57] 2024-09-08 15:42:42,249 | INFO     | mean y: 2371244.1796116503
[2024-09-08 17:42:57] 2024-09-08 15:42:42,249 | INFO     | -- intersect: 12202908110.139662
[2024-09-08 17:42:57] 2024-09-08 15:42:42,249 | INFO     | intersect: 12202908110.139662
[2024-09-08 17:42:57] 2024-09-08 15:42:42,249 | INFO     | chi2: 0.9202466097715807
[2024-09-08 17:42:57] 2024-09-08 15:42:42,249 | INFO     | current chi2=0.9202466097715807 (change=7.552209381122431 %)
[2024-09-08 17:42:57] 2024-09-08 15:42:42,249 | INFO     | left removable region: 40
[2024-09-08 17:42:57] 2024-09-08 15:42:42,250 | INFO     | model: linear, x: [1725798854.0, 1725798915.0, 1725798976.0, 1725799037.0, 1725799098.0, 1725799159.0, 1725799220.0, 1725799281.0, 1725799342.0, 1725799403.0, 1725
[2024-09-08 17:42:57] 2024-09-08 15:42:42,250 | INFO     | sum of square deviations: 1808350185.0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,251 | INFO     | sum of deviations: -8832646249.5
[2024-09-08 17:42:57] 2024-09-08 15:42:42,251 | INFO     | mean x: 1725804313.5
[2024-09-08 17:42:57] 2024-09-08 15:42:42,251 | INFO     | mean y: 2385952.0055555557
[2024-09-08 17:42:57] 2024-09-08 15:42:42,251 | INFO     | -- intersect: 8431847857.917709
[2024-09-08 17:42:57] 2024-09-08 15:42:42,251 | INFO     | intersect: 8431847857.917709
[2024-09-08 17:42:57] 2024-09-08 15:42:42,252 | INFO     | chi2: 0.1578729416573537
[2024-09-08 17:42:57] 2024-09-08 15:42:42,252 | INFO     | -- intersect: 8431847857.917709
[2024-09-08 17:42:57] 2024-09-08 15:42:42,252 | INFO     | current memory leak: -4.88 B/s (using 180 data points, chi2=0.16)
[2024-09-08 17:42:57] 2024-09-08 15:42:42,252 | INFO     | ..............................
[2024-09-08 17:42:57] 2024-09-08 15:42:42,252 | INFO     | . Timing measurements:
[2024-09-08 17:42:57] 2024-09-08 15:42:42,253 | INFO     | . get job = 0 s
[2024-09-08 17:42:57] 2024-09-08 15:42:42,253 | INFO     | . initial setup = 1 s
[2024-09-08 17:42:57] 2024-09-08 15:42:42,253 | INFO     | . payload setup = 7 s
[2024-09-08 17:42:57] 2024-09-08 15:42:42,253 | INFO     | . stage-in = 0 s
[2024-09-08 17:42:57] 2024-09-08 15:42:42,253 | INFO     | . payload execution = 13742 s
[2024-09-08 17:42:57] 2024-09-08 15:42:42,253 | INFO     | . stage-out = 1 s
[2024-09-08 17:42:57] 2024-09-08 15:42:42,253 | INFO     | . log creation = 0 s
[2024-09-08 17:42:57] 2024-09-08 15:42:42,253 | INFO     | ..............................
[2024-09-08 17:42:57] 2024-09-08 15:42:42,624 | INFO     | 
[2024-09-08 17:42:57] 2024-09-08 15:42:42,625 | INFO     | job summary report
[2024-09-08 17:42:57] 2024-09-08 15:42:42,625 | INFO     | --------------------------------------------------
[2024-09-08 17:42:57] 2024-09-08 15:42:42,625 | INFO     | PanDA job id: 6323094686
[2024-09-08 17:42:57] 2024-09-08 15:42:42,625 | INFO     | task id: 40994252
[2024-09-08 17:42:57] 2024-09-08 15:42:42,625 | INFO     | errors: (none)
[2024-09-08 17:42:57] 2024-09-08 15:42:42,625 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-08 17:42:57] 2024-09-08 15:42:42,625 | INFO     | pilot state: finished 
[2024-09-08 17:42:57] 2024-09-08 15:42:42,625 | INFO     | transexitcode: 0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,625 | INFO     | exeerrorcode: 0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | exeerrordiag: 
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | exitcode: 0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | exitmsg: OK
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | cpuconsumptiontime: 147825 s
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | nevents: 400
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | neventsw: 0
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | pid: 4058865
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | pgrp: 4058865
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | corecount: 12
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | event service: False
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | sizes: {0: 2466229, 6: 2466435, 11: 2466463, 13752: 2496684, 13753: 2496683, 13754: 2505701, 13755: 2505885, 13762: 2506055}
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | --------------------------------------------------
[2024-09-08 17:42:57] 2024-09-08 15:42:42,626 | INFO     | 
[2024-09-08 17:42:57] 2024-09-08 15:42:42,627 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2024-09-08 17:42:57] 2024-09-08 15:42:42,654 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,654 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,654 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,654 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,656 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-08 17:42:57] 2024-09-08 15:42:42,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,656 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-08 17:42:57] 2024-09-08 15:42:42,656 | INFO     | job 6323094686 has completed (purged errors)
[2024-09-08 17:42:57] 2024-09-08 15:42:42,656 | INFO     | overall cleanup function is called
[2024-09-08 17:42:57] 2024-09-08 15:42:43,665 | INFO     | --- collectZombieJob: --- 10, [4058865]
[2024-09-08 17:42:57] 2024-09-08 15:42:43,666 | INFO     | zombie collector waiting for pid 4058865
[2024-09-08 17:42:57] 2024-09-08 15:42:43,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-08 17:42:57] 2024-09-08 15:42:44,671 | INFO     | collected zombie processes
[2024-09-08 17:42:57] 2024-09-08 15:42:44,672 | INFO     | will now attempt to kill all subprocesses of pid=4058865
[2024-09-08 17:42:57] 2024-09-08 15:42:44,824 | INFO     | process IDs to be killed: [4058865] (in reverse order)
[2024-09-08 17:42:57] 2024-09-08 15:42:44,941 | WARNING  | found no corresponding commands to process id(s)
[2024-09-08 17:42:57] 2024-09-08 15:42:44,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-08 17:42:57] 2024-09-08 15:42:44,954 | INFO     | did not find any defunct processes belonging to 4058865
[2024-09-08 17:42:57] 2024-09-08 15:42:44,964 | INFO     | did not find any defunct processes belonging to 4058865
[2024-09-08 17:42:57] 2024-09-08 15:42:44,964 | INFO     | ready for new job
[2024-09-08 17:42:57] 2024-09-08 15:42:44,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-08 17:42:57] 2024-09-08 15:42:44,967 | INFO     | *************************************
[2024-09-08 17:42:57] 2024-09-08 15:42:44,967 | INFO     | ***  PanDA Pilot version 3.7.9.1  ***
[2024-09-08 17:42:57] 2024-09-08 15:42:44,967 | INFO     | *************************************
[2024-09-08 17:42:57] 2024-09-08 15:42:44,967 | INFO     | 
[2024-09-08 17:42:57] 2024-09-08 15:42:44,987 | INFO     | architecture information:
[2024-09-08 17:42:57] 2024-09-08 15:42:44,987 | INFO     | executing command: cat /etc/os-release
[2024-09-08 17:42:57] 2024-09-08 15:42:45,012 | INFO     | cat /etc/os-release:
[2024-09-08 17:42:57] NAME="CentOS Linux"
[2024-09-08 17:42:57] VERSION="7 (Core)"
[2024-09-08 17:42:57] ID="centos"
[2024-09-08 17:42:57] ID_LIKE="rhel fedora"
[2024-09-08 17:42:57] VERSION_ID="7"
[2024-09-08 17:42:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-08 17:42:57] ANSI_COLOR="0;31"
[2024-09-08 17:42:57] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-08 17:42:57] HOME_URL="https://www.centos.org/"
[2024-09-08 17:42:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-08 17:42:57] 
[2024-09-08 17:42:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-08 17:42:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-08 17:42:57] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-08 17:42:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-08 17:42:57] 
[2024-09-08 17:42:57] 2024-09-08 15:42:45,013 | INFO     | *************************************
[2024-09-08 17:42:57] 2024-09-08 15:42:45,516 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2024-09-08 17:42:57] 2024-09-08 15:42:45,542 | INFO     | sufficient remaining disk space (1670889078784 B)
[2024-09-08 17:42:57] 2024-09-08 15:42:45,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-08 17:42:57] 2024-09-08 15:42:45,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-08 17:42:57] 2024-09-08 15:42:45,571 | INFO     | found 0 job(s) in 20 queues
[2024-09-08 17:42:57] 2024-09-08 15:42:45,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-08 17:42:57] 2024-09-08 15:42:45,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-08 17:42:57] 2024-09-08 15:42:45,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-08 17:42:57] 2024-09-08 15:42:46,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-08 17:42:57] 2024-09-08 15:42:46,018 | INFO     | aborting loop
[2024-09-08 17:42:57] 2024-09-08 15:42:46,214 | INFO     | all payload control threads have been joined
[2024-09-08 17:42:57] 2024-09-08 15:42:46,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-08 17:42:57] 2024-09-08 15:42:46,548 | INFO     | [job] retrieve thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:46,618 | INFO     | [job] validate thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:46,621 | INFO     | all data control threads have been joined
[2024-09-08 17:42:57] 2024-09-08 15:42:46,654 | INFO     | all job control threads have been joined
[2024-09-08 17:42:57] 2024-09-08 15:42:47,023 | INFO     | [job] job monitor thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:47,036 | INFO     | [job] create_data_payload thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:47,091 | INFO     | [payload] validate_pre thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:47,183 | INFO     | [payload] failed_post thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:47,219 | INFO     | [payload] control thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:47,341 | INFO     | [data] copytool_in thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:47,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-08 17:42:57] 2024-09-08 15:42:47,481 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:47,572 | INFO     | [payload] validate_post thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:47,619 | INFO     | [payload] execute_payloads thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:47,626 | INFO     | [data] control thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:47,660 | INFO     | [job] control thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:47,662 | INFO     | [data] copytool_out thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:48,372 | INFO     | [job] queue monitor thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:50,352 | INFO     | [data] queue_monitor thread has finished
[2024-09-08 17:42:57] 2024-09-08 15:42:52,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288654976832)>', '<ExcThread(monitor, started 140288160937728)>']
[2024-09-08 17:42:57] 2024-09-08 15:42:52,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-08 17:42:57] 2024-09-08 15:42:52,604 | INFO     | [monitor] control thread has ended
[2024-09-08 17:42:57] 2024-09-08 15:42:57,434 | INFO     | all workflow threads have been joined
[2024-09-08 17:42:57] 2024-09-08 15:42:57,434 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-08 17:42:57] 2024-09-08 15:42:57,498 | INFO     | traces error code: 0
[2024-09-08 17:42:57] 2024-09-08 15:42:57,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-08 17:42:57] 2024-09-08 15:42:57,675 [wrapper] ==== pilot stdout END ====
[2024-09-08 17:42:57] 2024-09-08 15:42:57,680 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-08 17:42:57] 2024-09-08 15:42:57,684 [wrapper] pilotpid: 4051794
[2024-09-08 17:42:57] 2024-09-08 15:42:57,688 [wrapper] Pilot exit status: 0
[2024-09-08 17:42:57] 2024-09-08 15:42:57,703 [wrapper] pandaids: 6323094686
[2024-09-08 17:42:57] 2024-09-08 15:42:57,785 [wrapper] cleanup supervisor_pilot 2230171 4051795
[2024-09-08 17:42:57] 2024-09-08 15:42:57,790 [wrapper] Test setup, not cleaning
[2024-09-08 17:42:57] 2024-09-08 15:42:57,794 [wrapper] ==== wrapper stdout END ====
[2024-09-08 17:42:57] 2024-09-08 15:42:57,798 [wrapper] ==== wrapper stderr END ====
[2024-09-08 17:42:57] 2024-09-08 15:42:57,806 [wrapper] apfmon messages muted
[2024-09-08 17:42:57]  *** Error codes and diagnostics ***
[2024-09-08 17:42:57]     "exeErrorCode": 0,
[2024-09-08 17:42:57]     "exeErrorDiag": "",
[2024-09-08 17:42:57]     "pilotErrorCode": 0,
[2024-09-08 17:42:57]     "pilotErrorDiag": "",
[2024-09-08 17:42:57]  *** Listing of results directory ***
[2024-09-08 17:42:57] total 856984
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc    468654 Sep  7 16:29 pilot3.tar.gz
[2024-09-08 17:42:57] -rwx------ 1 boinc boinc     33179 Sep  7 17:19 runpilot2-wrapper.sh
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc      5654 Sep  7 17:19 queuedata.json
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc       100 Sep  8 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-08 17:42:57] -rwxr-xr-x 1 boinc boinc      7986 Sep  8 13:52 run_atlas
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc       105 Sep  8 13:52 job.xml
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc      6664 Sep  8 13:52 init_data.xml
[2024-09-08 17:42:57] -rw-r--r-- 2 boinc boinc 514563761 Sep  8 13:52 EVNT.40994249._001528.pool.root.1
[2024-09-08 17:42:57] -rw-r--r-- 2 boinc boinc     17537 Sep  8 13:52 start_atlas.sh
[2024-09-08 17:42:57] drwxrwx--x 2 boinc boinc      4096 Sep  8 13:52 shared
[2024-09-08 17:42:57] -rw-r--r-- 2 boinc boinc    481583 Sep  8 13:52 input.tar.gz
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc         0 Sep  8 13:52 boinc_lockfile
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc      2575 Sep  8 13:52 pandaJob.out
[2024-09-08 17:42:57] -rw------- 1 boinc boinc       424 Sep  8 13:52 setup.sh.local
[2024-09-08 17:42:57] -rw------- 1 boinc boinc   1009107 Sep  8 13:53 agis_schedconf.cvmfs.json
[2024-09-08 17:42:57] -rw------- 1 boinc boinc   1360150 Sep  8 13:53 cric_ddmendpoints.json
[2024-09-08 17:42:57] drwx------ 4 boinc boinc      4096 Sep  8 13:53 pilot3
[2024-09-08 17:42:57] -rw------- 1 boinc boinc 355795937 Sep  8 17:41 HITS.40994252._074500.pool.root.1
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc       532 Sep  8 17:41 boinc_task_state.xml
[2024-09-08 17:42:57] -rw------- 1 boinc boinc      1024 Sep  8 17:42 memory_monitor_summary.json
[2024-09-08 17:42:57] -rw------- 1 boinc boinc         0 Sep  8 17:42 agis_ddmendpoints.agis.ALL.json
[2024-09-08 17:42:57] -rw------- 1 boinc boinc    461488 Sep  8 17:42 log.40994252._074500.job.log.tgz.1
[2024-09-08 17:42:57] -rw------- 1 boinc boinc      7700 Sep  8 17:42 heartbeat.json
[2024-09-08 17:42:57] -rw------- 1 boinc boinc        95 Sep  8 17:42 pilot_heartbeat.json
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc      8192 Sep  8 17:42 boinc_mmap_file
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc        29 Sep  8 17:42 wrapper_checkpoint.txt
[2024-09-08 17:42:57] -rw------- 1 boinc boinc      4214 Sep  8 17:42 pilotlog.txt
[2024-09-08 17:42:57] -rw------- 1 boinc boinc   1348627 Sep  8 17:42 log.40994252._074500.job.log.1
[2024-09-08 17:42:57] -rw------- 1 boinc boinc       357 Sep  8 17:42 output.list
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc       620 Sep  8 17:42 runtime_log
[2024-09-08 17:42:57] -rw------- 1 boinc boinc   1832960 Sep  8 17:42 result.tar.gz
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc     11065 Sep  8 17:42 runtime_log.err
[2024-09-08 17:42:57] -rw------- 1 boinc boinc       658 Sep  8 17:42 c9uLDmYOC75nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmViTKDm13GyZn.diag
[2024-09-08 17:42:57] -rw-r--r-- 1 boinc boinc     21525 Sep  8 17:42 stderr.txt
[2024-09-08 17:42:57] HITS file was successfully produced:
[2024-09-08 17:42:57] -rw------- 1 boinc boinc 355795937 Sep  8 17:41 shared/HITS.pool.root.1
[2024-09-08 17:42:57]  *** Contents of shared directory: ***
[2024-09-08 17:42:57] total 852256
[2024-09-08 17:42:57] -rw-r--r-- 2 boinc boinc 514563761 Sep  8 13:52 ATLAS.root_0
[2024-09-08 17:42:57] -rw-r--r-- 2 boinc boinc     17537 Sep  8 13:52 start_atlas.sh
[2024-09-08 17:42:57] -rw-r--r-- 2 boinc boinc    481583 Sep  8 13:52 input.tar.gz
[2024-09-08 17:42:57] -rw------- 1 boinc boinc 355795937 Sep  8 17:41 HITS.pool.root.1
[2024-09-08 17:42:57] -rw------- 1 boinc boinc   1832960 Sep  8 17:42 result.tar.gz
17:42:59 (4047788): run_atlas exited; CPU time 147565.996265
17:42:59 (4047788): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN