Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2024-09-08 20:32:44 (211221): Detected: vboxwrapper 26206
2024-09-08 20:32:44 (211221): Detected: BOINC client v8.0.4
2024-09-08 20:32:44 (211221): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2024-09-08 20:32:44 (211221): Successfully copied 'init_data.xml' to the shared directory.
2024-09-08 20:32:44 (211221): Create VM. (boinc_167e845e6c321a25, slot#0)
2024-09-08 20:32:45 (211221): Setting Memory Size for VM. (4600MB)
2024-09-08 20:32:46 (211221): Setting CPU Count for VM. (6)
2024-09-08 20:32:46 (211221): Setting Chipset Options for VM.
2024-09-08 20:32:46 (211221): Setting Graphics Controller Options for VM.
2024-09-08 20:32:46 (211221): Setting Boot Options for VM.
2024-09-08 20:32:46 (211221): Setting Network Configuration for NAT.
2024-09-08 20:32:47 (211221): Enabling VM Network Access.
2024-09-08 20:32:47 (211221): Disabling USB Support for VM.
2024-09-08 20:32:47 (211221): Disabling COM Port Support for VM.
2024-09-08 20:32:47 (211221): Disabling LPT Port Support for VM.
2024-09-08 20:32:47 (211221): Disabling Audio Support for VM.
2024-09-08 20:32:47 (211221): Disabling Clipboard Support for VM.
2024-09-08 20:32:48 (211221): Disabling Drag and Drop Support for VM.
2024-09-08 20:32:48 (211221): Adding storage controller(s) to VM.
2024-09-08 20:32:48 (211221): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-09-08 20:32:50 (211221): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-09-08 20:32:50 (211221): forwarding host port 54613 to guest port 80
2024-09-08 20:32:50 (211221): Enabling remote desktop for VM.
2024-09-08 20:32:50 (211221): Required extension pack not installed, remote desktop not enabled.
2024-09-08 20:32:50 (211221): Enabling shared directory for VM.
2024-09-08 20:32:50 (211221): Starting VM using VBoxManage interface. (boinc_167e845e6c321a25, slot#0)
2024-09-08 20:32:52 (211221): Successfully started VM. (PID = '211482')
2024-09-08 20:32:52 (211221): Reporting VM Process ID to BOINC.
2024-09-08 20:32:52 (211221): Guest Log: BIOS: VirtualBox 7.0.20
2024-09-08 20:32:52 (211221): Guest Log: CPUID EDX: 0x178bfbff
2024-09-08 20:32:52 (211221): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-09-08 20:32:52 (211221): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-09-08 20:32:52 (211221): VM state change detected. (old = 'poweredoff', new = 'running')
2024-09-08 20:32:52 (211221): Detected: Web Application Enabled (http://localhost:54613)
2024-09-08 20:32:52 (211221): Preference change detected
2024-09-08 20:32:52 (211221): Setting CPU throttle for VM. (50%)
2024-09-08 20:32:52 (211221): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-09-08 20:32:54 (211221): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-09-08 20:32:55 (211221): Guest Log: BIOS: Booting from Hard Disk...
2024-09-08 20:32:59 (211221): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-09-08 20:32:59 (211221): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-09-08 20:32:59 (211221): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-09-08 20:33:11 (211221): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-09-08 20:33:11 (211221): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-09-08 20:33:26 (211221): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-09-08 20:33:26 (211221): Guest Log: 00:00:00.000174 main     Log opened 2024-09-08T18:33:24.539175000Z
2024-09-08 20:33:26 (211221): Guest Log: 00:00:00.000284 main     OS Product: Linux
2024-09-08 20:33:26 (211221): Guest Log: 00:00:00.000830 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-09-08 20:33:26 (211221): Guest Log: 00:00:00.000878 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-09-08 20:33:26 (211221): Guest Log: 00:00:00.000905 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-09-08 20:33:26 (211221): Guest Log: 00:00:00.000906 main     Process ID: 1326
2024-09-08 20:33:26 (211221): Guest Log: 00:00:00.000907 main     Package type: LINUX_64BITS_GENERIC
2024-09-08 20:33:26 (211221): Guest Log: 00:00:00.003089 main     5.2.32 r132073 started. Verbose level = 0
2024-09-08 20:33:26 (211221): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-09-08 20:33:26 (211221): Guest Log: [INFO] Mounting shared directory
2024-09-08 20:33:26 (211221): Guest Log: [INFO] Checking for init_data.xml
2024-09-08 20:33:29 (211221): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-09-08 20:33:29 (211221): Guest Log: [INFO] Detected branch: prod
2024-09-08 20:33:29 (211221): Guest Log: This is the prod version of the ATLAS job wrapper
2024-09-08 20:33:29 (211221): Guest Log: Copying input files
2024-09-08 20:33:36 (211221): Guest Log: Copied input files into RunAtlas.
2024-09-08 20:33:36 (211221): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-09-08 20:33:36 (211221): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-09-08 20:33:36 (211221): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-09-08 20:33:36 (211221): Guest Log: Further information can be found at the LHC@home message board.
2024-09-08 20:33:48 (211221): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-09-08 20:33:48 (211221): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-09-08 20:33:48 (211221): Guest Log: 2.6.3.0 1602 0 30228 137023 4 1 3117302 4096000 0 65024 0 0 n/a 1 22 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-09-08 20:33:51 (211221): Guest Log: copied the webapp to /var/www
2024-09-08 20:33:51 (211221): Guest Log: ATHENA_PROC_NUMBER=6
2024-09-08 20:33:51 (211221): Guest Log: ATHENA_CORE_NUMBER=6
2024-09-08 20:33:52 (211221): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-09-08 20:33:52 (211221): Guest Log:  *** Starting ATLAS job. (PandaID=6322914958 taskID=40994252) ***
2024-09-08 22:11:53 (211221): Status Report: Elapsed Time: '6000.000000'
2024-09-08 22:11:53 (211221): Status Report: CPU Time: '14062.120000'
2024-09-08 23:50:53 (211221): Status Report: Elapsed Time: '12000.000000'
2024-09-08 23:50:53 (211221): Status Report: CPU Time: '33004.520000'
2024-09-09 01:29:53 (211221): Status Report: Elapsed Time: '18000.000000'
2024-09-09 01:29:53 (211221): Status Report: CPU Time: '51896.810000'
2024-09-09 03:08:54 (211221): Status Report: Elapsed Time: '24000.000000'
2024-09-09 03:08:54 (211221): Status Report: CPU Time: '70822.120000'
2024-09-09 04:47:54 (211221): Status Report: Elapsed Time: '30000.000000'
2024-09-09 04:47:54 (211221): Status Report: CPU Time: '89772.050000'
2024-09-09 06:26:55 (211221): Status Report: Elapsed Time: '36000.000000'
2024-09-09 06:26:55 (211221): Status Report: CPU Time: '108587.730000'
2024-09-09 08:05:55 (211221): Status Report: Elapsed Time: '42000.000000'
2024-09-09 08:05:55 (211221): Status Report: CPU Time: '127430.330000'
2024-09-09 09:44:56 (211221): Status Report: Elapsed Time: '48000.000000'
2024-09-09 09:44:56 (211221): Status Report: CPU Time: '146221.340000'
2024-09-09 09:57:08 (211221): Guest Log:  *** Job finished ***
2024-09-09 09:57:08 (211221): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:56:51,381 | INFO     | [data] queue_monitor thread has finished
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:56:55,788 | INFO     | job.realtimelogging is not enabled
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:56:56,790 | INFO     | [payload] run_realtimelog thread has finished
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:56:57,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837148268352)>', '<ExcThread(monitor, started 139836325349120)>']
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:56:57,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:56:57,976 | INFO     | [monitor] control thread has ended
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,290 | INFO     | all workflow threads have been joined
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,290 | INFO     | end of generic workflow (traces error code: 0)
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,291 | INFO     | traces error code: 0
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,408 [wrapper] ==== pilot stdout END ====
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,413 [wrapper] ==== wrapper stdout RESUME ====
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,419 [wrapper] pilotpid: 5946
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,425 [wrapper] Pilot exit status: 0
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,458 [wrapper] pandaids: 6322914958
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,502 [wrapper] cleanup supervisor_pilot 20467 5947
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,506 [wrapper] Test setup, not cleaning
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,510 [wrapper] ==== wrapper stdout END ====
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,515 [wrapper] ==== wrapper stderr END ====
2024-09-09 09:57:08 (211221): Guest Log: 2024-09-09 07:57:02,522 [wrapper] apfmon messages muted
2024-09-09 09:57:08 (211221): Guest Log:  *** Error codes and diagnostics ***
2024-09-09 09:57:08 (211221): Guest Log:     "exeErrorCode": 0,
2024-09-09 09:57:08 (211221): Guest Log:     "exeErrorDiag": "",
2024-09-09 09:57:08 (211221): Guest Log:     "pilotErrorCode": 0,
2024-09-09 09:57:08 (211221): Guest Log:     "pilotErrorDiag": "",
2024-09-09 09:57:08 (211221): Guest Log:  *** Listing of results directory ***
2024-09-09 09:57:08 (211221): Guest Log: total 357688
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Sep  7 11:30 queuedata.json
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 atlas atlas    468654 Sep  7 11:30 pilot3.tar.gz
2024-09-09 09:57:08 (211221): Guest Log: -rwx------. 1 atlas atlas     33179 Sep  7 11:30 runpilot2-wrapper.sh
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Sep  8 18:33 start_atlas.sh
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 atlas atlas      6647 Sep  8 18:33 init_data.xml
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 atlas atlas    481591 Sep  8 18:33 input.tar.gz
2024-09-09 09:57:08 (211221): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Sep  8 18:33 EVNT.40994249._001418.pool.root.1 -> /data/./ATLAS.root_0
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 atlas atlas      2575 Sep  8 18:33 pandaJob.out
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas       424 Sep  8 18:33 setup.sh.local
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas   1009131 Sep  8 18:34 agis_schedconf.cvmfs.json
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas   1360150 Sep  8 18:34 cric_ddmendpoints.json
2024-09-09 09:57:08 (211221): Guest Log: drwx------. 4 atlas atlas      4096 Sep  8 18:34 pilot3
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas 354643860 Sep  9 07:55 HITS.40994252._073206.pool.root.1
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas      1042 Sep  9 07:56 memory_monitor_summary.json
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas         0 Sep  9 07:56 agis_ddmendpoints.agis.ALL.json
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas    562146 Sep  9 07:56 log.40994252._073206.job.log.tgz.1
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas        95 Sep  9 07:56 pilot_heartbeat.json
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas      7745 Sep  9 07:56 heartbeat.json
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas      4466 Sep  9 07:57 pilotlog.txt
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas   3502282 Sep  9 07:57 log.40994252._073206.job.log.1
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas       357 Sep  9 07:57 output.list
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 atlas atlas       620 Sep  9 07:57 runtime_log
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas   4085760 Sep  9 07:57 result.tar.gz
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas       676 Sep  9 07:57 XgKNDmPp865n7OlckoGmwREmGgkVDo1bjSoqOlfODmMuiKDmLrN7sn.diag
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 atlas atlas     11015 Sep  9 07:57 runtime_log.err
2024-09-09 09:57:08 (211221): Guest Log: Looking for outputfile HITS.40994252._073206.pool.root.1
2024-09-09 09:57:08 (211221): Guest Log: HITS file was successfully produced
2024-09-09 09:57:08 (211221): Guest Log: -rw-------. 1 atlas atlas 354643860 Sep  9 07:55 /home/atlas/RunAtlas/HITS.40994252._073206.pool.root.1
2024-09-09 09:57:08 (211221): Guest Log: Successfully finished the ATLAS job!
2024-09-09 09:57:08 (211221): Guest Log: Copying the results back to the shared directory!
2024-09-09 09:57:08 (211221): Guest Log:  *** Contents of shared directory: ***
2024-09-09 09:57:08 (211221): Guest Log: total 508684
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 root root 516286823 Sep  8 18:32 ATLAS.root_0
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 root root      6647 Sep  8 18:32 init_data.xml
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 root root    481591 Sep  8 18:32 input.tar.gz
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 root root   4085760 Sep  9 07:57 result.tar.gz
2024-09-09 09:57:08 (211221): Guest Log: -rw-r--r--. 1 root root     17537 Sep  8 18:32 start_atlas.sh
2024-09-09 09:57:09 (211221): Guest Log:  *** Success! Shutting down the machine. ***
2024-09-09 09:57:09 (211221): VM Completion File Detected.
2024-09-09 09:57:09 (211221): Powering off VM.
2024-09-09 09:57:10 (211221): Successfully stopped VM.
2024-09-09 09:57:10 (211221): Deregistering VM. (boinc_167e845e6c321a25, slot#0)
2024-09-09 09:57:10 (211221): Removing network bandwidth throttle group from VM.
2024-09-09 09:57:10 (211221): Removing VM from VirtualBox.
09:57:15 (211221): called boinc_finish(0)

</stderr_txt>
]]>

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