Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:40:30 (9574): wrapper (7.7.26015): starting
06:40:30 (9574): wrapper: running run_atlas (--nthreads 8)
[2024-07-04 06:40:30] Arguments: --nthreads 8
[2024-07-04 06:40:30] Threads: 8
[2024-07-04 06:40:30] Checking for CVMFS
[2024-07-04 06:40:30] Probing /cvmfs/atlas.cern.ch... OK
[2024-07-04 06:40:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-07-04 06:40:30] Running cvmfs_config stat atlas.cern.ch
[2024-07-04 06:40:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-07-04 06:40:31] 2.11.2.0 19372 2590 51876 134596 3 75 24857536 25165824 665 130560 0 129954 99.859 422701 14098 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2024-07-04 06:40:31] CVMFS is ok
[2024-07-04 06:40:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-07-04 06:40:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-07-04 06:40:31] Further information can be found at the LHC@home message board.
[2024-07-04 06:40:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-07-04 06:40:31] Checking for apptainer binary...
[2024-07-04 06:40:32] Using apptainer found in PATH at /usr/bin/apptainer
[2024-07-04 06:40:32] Running /usr/bin/apptainer --version
[2024-07-04 06:40:32] apptainer version 1.3.1-1.el7
[2024-07-04 06:40:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-07-04 06:40:33] cg-vwn335.simple-grid.lan
[2024-07-04 06:40:33] apptainer works
[2024-07-04 06:40:33] Set ATHENA_PROC_NUMBER=8
[2024-07-04 06:40:33] Set ATHENA_CORE_NUMBER=8
[2024-07-04 06:40:33] Starting ATLAS job with PandaID=6253079451
[2024-07-04 06:40:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-07-04 14:13:54]  *** The last 200 lines of the pilot log: ***
[2024-07-04 14:13:54] 2024-07-04 12:08:31,537 | INFO     | sum of square deviations: 25348093872.5
[2024-07-04 14:13:54] 2024-07-04 12:08:31,543 | INFO     | sum of deviations: 182003187043.99997
[2024-07-04 14:13:54] 2024-07-04 12:08:31,543 | INFO     | mean x: 1720081282.5
[2024-07-04 14:13:54] 2024-07-04 12:08:31,543 | INFO     | mean y: 2551156.755760369
[2024-07-04 14:13:54] 2024-07-04 12:08:31,543 | INFO     | -- intersect: -12347895269.88337
[2024-07-04 14:13:54] 2024-07-04 12:08:31,543 | INFO     | intersect: -12347895269.88337
[2024-07-04 14:13:54] 2024-07-04 12:08:31,544 | INFO     | chi2: 4.459953327617746
[2024-07-04 14:13:54] 2024-07-04 12:08:31,544 | INFO     | current chi2=4.459953327617746 (change=26.974119638209228 %)
[2024-07-04 14:13:54] 2024-07-04 12:08:31,544 | INFO     | model: linear, x: [1720068076.0, 1720068137.0, 1720068198.0, 1720068259.0, 1720068320.0, 1720068381.0, 1720068442.0, 1720068503.0, 1720068564.0, 1720068625.0, 1720
[2024-07-04 14:13:54] 2024-07-04 12:08:31,545 | INFO     | sum of square deviations: 24482059030.0
[2024-07-04 14:13:54] 2024-07-04 12:08:31,550 | INFO     | sum of deviations: 179491168796.99997
[2024-07-04 14:13:54] 2024-07-04 12:08:31,550 | INFO     | mean x: 1720081130.0
[2024-07-04 14:13:54] 2024-07-04 12:08:31,550 | INFO     | mean y: 2550714.393939394
[2024-07-04 14:13:54] 2024-07-04 12:08:31,550 | INFO     | -- intersect: -12608291048.181633
[2024-07-04 14:13:54] 2024-07-04 12:08:31,550 | INFO     | intersect: -12608291048.181633
[2024-07-04 14:13:54] 2024-07-04 12:08:31,551 | INFO     | chi2: 4.461653019211778
[2024-07-04 14:13:54] 2024-07-04 12:08:31,551 | INFO     | current chi2=4.461653019211778 (change=-0.03811007580521115 %)
[2024-07-04 14:13:54] 2024-07-04 12:08:31,551 | INFO     | right removable region: 428
[2024-07-04 14:13:54] 2024-07-04 12:08:31,552 | INFO     | model: linear, x: [1720068381.0, 1720068442.0, 1720068503.0, 1720068564.0, 1720068625.0, 1720068686.0, 1720068747.0, 1720068808.0, 1720068869.0, 1720068930.0, 1720
[2024-07-04 14:13:54] 2024-07-04 12:08:31,552 | INFO     | sum of square deviations: 25348093872.5
[2024-07-04 14:13:54] 2024-07-04 12:08:31,558 | INFO     | sum of deviations: 5690375026.500004
[2024-07-04 14:13:54] 2024-07-04 12:08:31,558 | INFO     | mean x: 1720081587.5
[2024-07-04 14:13:54] 2024-07-04 12:08:31,558 | INFO     | mean y: 2560616.513824885
[2024-07-04 14:13:54] 2024-07-04 12:08:31,558 | INFO     | -- intersect: -383579239.141015
[2024-07-04 14:13:54] 2024-07-04 12:08:31,558 | INFO     | intersect: -383579239.141015
[2024-07-04 14:13:54] 2024-07-04 12:08:31,559 | INFO     | chi2: 3.5416396418882603
[2024-07-04 14:13:54] 2024-07-04 12:08:31,559 | INFO     | current chi2=3.5416396418882603 (change=42.01030060750573 %)
[2024-07-04 14:13:54] 2024-07-04 12:08:31,560 | INFO     | model: linear, x: [1720068686.0, 1720068747.0, 1720068808.0, 1720068869.0, 1720068930.0, 1720068991.0, 1720069052.0, 1720069113.0, 1720069174.0, 1720069235.0, 1720
[2024-07-04 14:13:54] 2024-07-04 12:08:31,560 | INFO     | sum of square deviations: 24482059030.0
[2024-07-04 14:13:54] 2024-07-04 12:08:31,565 | INFO     | sum of deviations: -79730533668.99998
[2024-07-04 14:13:54] 2024-07-04 12:08:31,566 | INFO     | mean x: 1720081740.0
[2024-07-04 14:13:54] 2024-07-04 12:08:31,566 | INFO     | mean y: 2575658.006993007
[2024-07-04 14:13:54] 2024-07-04 12:08:31,566 | INFO     | -- intersect: 5604352653.824574
[2024-07-04 14:13:54] 2024-07-04 12:08:31,566 | INFO     | intersect: 5604352653.824574
[2024-07-04 14:13:54] 2024-07-04 12:08:31,567 | INFO     | chi2: 2.230311936308344
[2024-07-04 14:13:54] 2024-07-04 12:08:31,567 | INFO     | current chi2=2.230311936308344 (change=37.02600597955722 %)
[2024-07-04 14:13:54] 2024-07-04 12:08:31,567 | INFO     | model: linear, x: [1720068991.0, 1720069052.0, 1720069113.0, 1720069174.0, 1720069235.0, 1720069296.0, 1720069357.0, 1720069418.0, 1720069479.0, 1720069540.0, 1720
[2024-07-04 14:13:54] 2024-07-04 12:08:31,568 | INFO     | sum of square deviations: 23635978050.0
[2024-07-04 14:13:54] 2024-07-04 12:08:31,573 | INFO     | sum of deviations: -111321763248.5
[2024-07-04 14:13:54] 2024-07-04 12:08:31,573 | INFO     | mean x: 1720081892.5
[2024-07-04 14:13:54] 2024-07-04 12:08:31,573 | INFO     | mean y: 2581323.375
[2024-07-04 14:13:54] 2024-07-04 12:08:31,574 | INFO     | -- intersect: 8103898256.393426
[2024-07-04 14:13:54] 2024-07-04 12:08:31,574 | INFO     | intersect: 8103898256.393426
[2024-07-04 14:13:54] 2024-07-04 12:08:31,574 | INFO     | chi2: 1.9042757536322004
[2024-07-04 14:13:54] 2024-07-04 12:08:31,575 | INFO     | current chi2=1.9042757536322004 (change=14.618411773189235 %)
[2024-07-04 14:13:54] 2024-07-04 12:08:31,575 | INFO     | left removable region: 30
[2024-07-04 14:13:54] 2024-07-04 12:08:31,575 | INFO     | model: linear, x: [1720069906.0, 1720069967.0, 1720070028.0, 1720070089.0, 1720070150.0, 1720070211.0, 1720070272.0, 1720070333.0, 1720070394.0, 1720070455.0, 1720
[2024-07-04 14:13:54] 2024-07-04 12:08:31,575 | INFO     | sum of square deviations: 19549015839.5
[2024-07-04 14:13:54] 2024-07-04 12:08:31,580 | INFO     | sum of deviations: -12806253837.500008
[2024-07-04 14:13:54] 2024-07-04 12:08:31,580 | INFO     | mean x: 1720082014.5
[2024-07-04 14:13:54] 2024-07-04 12:08:31,580 | INFO     | mean y: 2585203.17839196
[2024-07-04 14:13:54] 2024-07-04 12:08:31,581 | INFO     | -- intersect: 1129383967.876143
[2024-07-04 14:13:54] 2024-07-04 12:08:31,581 | INFO     | intersect: 1129383967.876143
[2024-07-04 14:13:54] 2024-07-04 12:08:31,581 | INFO     | chi2: 0.10503732491255235
[2024-07-04 14:13:54] 2024-07-04 12:08:31,581 | INFO     | -- intersect: 1129383967.876143
[2024-07-04 14:13:54] 2024-07-04 12:08:31,582 | INFO     | current memory leak: -0.66 B/s (using 398 data points, chi2=0.11)
[2024-07-04 14:13:54] 2024-07-04 12:08:31,583 | INFO     | ..............................
[2024-07-04 14:13:54] 2024-07-04 12:08:31,583 | INFO     | . Timing measurements:
[2024-07-04 14:13:54] 2024-07-04 12:08:31,583 | INFO     | . get job = 0 s
[2024-07-04 14:13:54] 2024-07-04 12:08:31,583 | INFO     | . initial setup = 1 s
[2024-07-04 14:13:54] 2024-07-04 12:08:31,583 | INFO     | . payload setup = 7 s
[2024-07-04 14:13:54] 2024-07-04 12:08:31,583 | INFO     | . stage-in = 0 s
[2024-07-04 14:13:54] 2024-07-04 12:08:31,583 | INFO     | . payload execution = 26738 s
[2024-07-04 14:13:54] 2024-07-04 12:08:31,583 | INFO     | . stage-out = 2 s
[2024-07-04 14:13:54] 2024-07-04 12:08:31,583 | INFO     | . log creation = 1 s
[2024-07-04 14:13:54] 2024-07-04 12:08:31,584 | INFO     | ..............................
[2024-07-04 14:13:54] 2024-07-04 12:08:31,717 | INFO     | 
[2024-07-04 14:13:54] 2024-07-04 12:08:31,718 | INFO     | job summary report
[2024-07-04 14:13:54] 2024-07-04 12:08:31,718 | INFO     | --------------------------------------------------
[2024-07-04 14:13:54] 2024-07-04 12:08:31,718 | INFO     | PanDA job id: 6253079451
[2024-07-04 14:13:54] 2024-07-04 12:08:31,718 | INFO     | task id: 40174970
[2024-07-04 14:13:54] 2024-07-04 12:08:31,718 | INFO     | errors: (none)
[2024-07-04 14:13:54] 2024-07-04 12:08:31,718 | INFO     | status: LOG_TRANSFER = DONE 
[2024-07-04 14:13:54] 2024-07-04 12:08:31,718 | INFO     | pilot state: finished 
[2024-07-04 14:13:54] 2024-07-04 12:08:31,719 | INFO     | transexitcode: 0
[2024-07-04 14:13:54] 2024-07-04 12:08:31,719 | INFO     | exeerrorcode: 0
[2024-07-04 14:13:54] 2024-07-04 12:08:31,719 | INFO     | exeerrordiag: 
[2024-07-04 14:13:54] 2024-07-04 12:08:31,719 | INFO     | exitcode: 0
[2024-07-04 14:13:54] 2024-07-04 12:08:31,719 | INFO     | exitmsg: OK
[2024-07-04 14:13:54] 2024-07-04 12:08:31,719 | INFO     | cpuconsumptiontime: 103872 s
[2024-07-04 14:13:54] 2024-07-04 12:08:31,719 | INFO     | nevents: 400
[2024-07-04 14:13:54] 2024-07-04 12:08:31,719 | INFO     | neventsw: 0
[2024-07-04 14:13:54] 2024-07-04 12:08:31,719 | INFO     | pid: 19938
[2024-07-04 14:13:54] 2024-07-04 12:08:31,719 | INFO     | pgrp: 19938
[2024-07-04 14:13:54] 2024-07-04 12:08:31,720 | INFO     | corecount: 8
[2024-07-04 14:13:54] 2024-07-04 12:08:31,720 | INFO     | event service: False
[2024-07-04 14:13:54] 2024-07-04 12:08:31,720 | INFO     | sizes: {0: 2404377, 5: 2404583, 11: 2404639, 26748: 2440275, 26749: 2440274, 26752: 2449474, 26849: 2449588}
[2024-07-04 14:13:54] 2024-07-04 12:08:31,720 | INFO     | --------------------------------------------------
[2024-07-04 14:13:54] 2024-07-04 12:08:31,720 | INFO     | 
[2024-07-04 14:13:54] 2024-07-04 12:08:31,720 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-07-04 14:13:54] 2024-07-04 12:08:32,631 | WARNING  | process 19938 is no longer using CPU - aborting
[2024-07-04 14:13:54] 2024-07-04 12:08:32,631 | INFO     | aborting job monitoring since job object (job id=6253079451) has expired
[2024-07-04 14:13:54] 2024-07-04 12:08:33,223 | INFO     | queue jobs had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,223 | INFO     | queue payloads had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,224 | INFO     | queue data_in had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,224 | INFO     | queue data_out had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,225 | INFO     | queue completed_jobids has 1 job(s)
[2024-07-04 14:13:54] 2024-07-04 12:08:33,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,225 | INFO     | queue messages had 0 job(s) [purged]
[2024-07-04 14:13:54] 2024-07-04 12:08:33,226 | INFO     | job 6253079451 has completed (purged errors)
[2024-07-04 14:13:54] 2024-07-04 12:08:33,226 | INFO     | overall cleanup function is called
[2024-07-04 14:13:54] 2024-07-04 12:08:34,234 | INFO     | --- collectZombieJob: --- 10, [19938]
[2024-07-04 14:13:54] 2024-07-04 12:08:34,235 | INFO     | zombie collector waiting for pid 19938
[2024-07-04 14:13:54] 2024-07-04 12:08:34,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-07-04 14:13:54] 2024-07-04 12:08:35,240 | INFO     | collected zombie processes
[2024-07-04 14:13:54] 2024-07-04 12:08:35,241 | INFO     | will now attempt to kill all subprocesses of pid=19938
[2024-07-04 14:13:54] 2024-07-04 12:08:36,126 | INFO     | process IDs to be killed: [19938] (in reverse order)
[2024-07-04 14:13:54] 2024-07-04 12:08:37,109 | WARNING  | found no corresponding commands to process id(s)
[2024-07-04 14:13:54] 2024-07-04 12:08:37,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-07-04 14:13:54] 2024-07-04 12:08:37,112 | INFO     | did not find any defunct processes belonging to 19938
[2024-07-04 14:13:54] 2024-07-04 12:08:37,113 | INFO     | did not find any defunct processes belonging to 19938
[2024-07-04 14:13:54] 2024-07-04 12:08:37,114 | INFO     | ready for new job
[2024-07-04 14:13:54] 2024-07-04 12:08:37,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-07-04 14:13:54] 2024-07-04 12:08:37,116 | INFO     | *************************************
[2024-07-04 14:13:54] 2024-07-04 12:08:37,116 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-07-04 14:13:54] 2024-07-04 12:08:37,116 | INFO     | *************************************
[2024-07-04 14:13:54] 2024-07-04 12:08:37,116 | INFO     | 
[2024-07-04 14:13:54] 2024-07-04 12:08:37,117 | INFO     | pilot is running in a VM
[2024-07-04 14:13:54] 2024-07-04 12:08:37,117 | INFO     | architecture information:
[2024-07-04 14:13:54] 2024-07-04 12:08:37,130 | INFO     | executing command: cat /etc/os-release
[2024-07-04 14:13:54] 2024-07-04 12:08:37,360 | INFO     | cat /etc/os-release:
[2024-07-04 14:13:54] NAME="CentOS Linux"
[2024-07-04 14:13:54] VERSION="7 (Core)"
[2024-07-04 14:13:54] ID="centos"
[2024-07-04 14:13:54] ID_LIKE="rhel fedora"
[2024-07-04 14:13:54] VERSION_ID="7"
[2024-07-04 14:13:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-07-04 14:13:54] ANSI_COLOR="0;31"
[2024-07-04 14:13:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-07-04 14:13:54] HOME_URL="https://www.centos.org/"
[2024-07-04 14:13:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-07-04 14:13:54] 
[2024-07-04 14:13:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-07-04 14:13:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-07-04 14:13:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-07-04 14:13:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-07-04 14:13:54] 
[2024-07-04 14:13:54] 2024-07-04 12:08:37,360 | INFO     | *************************************
[2024-07-04 14:13:54] 2024-07-04 12:08:37,864 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-07-04 14:13:54] 2024-07-04 12:08:38,086 | INFO     | sufficient remaining disk space (491751735296 B)
[2024-07-04 14:13:54] 2024-07-04 12:08:38,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-07-04 14:13:54] 2024-07-04 12:08:38,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-07-04 14:13:54] 2024-07-04 12:08:38,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-07-04 14:13:54] 2024-07-04 12:08:38,090 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-07-04 14:13:54] 2024-07-04 12:08:38,091 | INFO     | found 0 job(s) in 20 queues
[2024-07-04 14:13:54] 2024-07-04 12:08:38,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-07-04 14:13:54] 2024-07-04 12:08:38,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-07-04 14:13:54] 2024-07-04 12:08:38,421 | INFO     | all data control threads have been joined
[2024-07-04 14:13:54] 2024-07-04 12:08:38,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-07-04 14:13:54] 2024-07-04 12:08:38,658 | INFO     | aborting loop
[2024-07-04 14:13:54] 2024-07-04 12:08:38,919 | INFO     | all job control threads have been joined
[2024-07-04 14:13:54] 2024-07-04 12:08:39,093 | INFO     | [job] retrieve thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:39,138 | INFO     | [payload] failed_post thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:39,311 | INFO     | all payload control threads have been joined
[2024-07-04 14:13:54] 2024-07-04 12:08:39,428 | INFO     | [data] control thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:39,664 | INFO     | [job] job monitor thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:39,695 | INFO     | [payload] validate_post thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:39,757 | INFO     | [job] validate thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:39,854 | INFO     | [payload] run_realtimelog thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:39,925 | INFO     | [job] control thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:39,960 | INFO     | [job] create_data_payload thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:39,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-07-04 14:13:54] 2024-07-04 12:08:39,995 | INFO     | [data] copytool_in thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:40,094 | INFO     | [data] copytool_out thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:40,176 | INFO     | [payload] validate_pre thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:40,317 | INFO     | [payload] control thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:40,328 | INFO     | [payload] execute_payloads thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:40,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-07-04 14:13:54] 2024-07-04 12:08:41,746 | INFO     | [job] queue monitor thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:43,985 | INFO     | [data] queue_monitor thread has finished
[2024-07-04 14:13:54] 2024-07-04 12:08:44,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140090144335680)>', '<ExcThread(monitor, started 140089308980992)>']
[2024-07-04 14:13:54] 2024-07-04 12:08:45,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-07-04 14:13:54] 2024-07-04 12:08:45,132 | INFO     | [monitor] control thread has ended
[2024-07-04 14:13:54] 2024-07-04 12:08:49,701 | INFO     | all workflow threads have been joined
[2024-07-04 14:13:54] 2024-07-04 12:08:49,702 | INFO     | end of generic workflow (traces error code: 0)
[2024-07-04 14:13:54] 2024-07-04 12:08:49,702 | INFO     | traces error code: 0
[2024-07-04 14:13:54] 2024-07-04 12:08:49,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-07-04 14:13:54] 2024-07-04 12:08:50,022 [wrapper] ==== pilot stdout END ====
[2024-07-04 14:13:54] 2024-07-04 12:08:50,143 [wrapper] ==== wrapper stdout RESUME ====
[2024-07-04 14:13:54] 2024-07-04 12:08:50,282 [wrapper] pilotpid: 13310
[2024-07-04 14:13:54] 2024-07-04 12:08:50,389 [wrapper] Pilot exit status: 0
[2024-07-04 14:13:54] 2024-07-04 12:08:50,929 [wrapper] pandaids: 6253079451
[2024-07-04 14:13:54] 2024-07-04 12:08:51,626 [wrapper] cleanup supervisor_pilot 26219 13311
[2024-07-04 14:13:54] 2024-07-04 12:08:51,729 [wrapper] Test setup, not cleaning
[2024-07-04 14:13:54] 2024-07-04 12:08:51,847 [wrapper] ==== wrapper stdout END ====
[2024-07-04 14:13:54] 2024-07-04 12:08:51,941 [wrapper] ==== wrapper stderr END ====
[2024-07-04 14:13:54] 2024-07-04 12:08:52,174 [wrapper] apfmon messages muted
[2024-07-04 14:13:54]  *** Error codes and diagnostics ***
[2024-07-04 14:13:54]     "exeErrorCode": 0,
[2024-07-04 14:13:54]     "exeErrorDiag": "",
[2024-07-04 14:13:54]     "pilotErrorCode": 0,
[2024-07-04 14:13:54]     "pilotErrorDiag": "",
[2024-07-04 14:13:54]  *** Listing of results directory ***
[2024-07-04 14:13:54] total 978952
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc    469766 Jul  4 06:23 pilot3.tar.gz
[2024-07-04 14:13:54] -rwx------. 1 boinc boinc     32220 Jul  4 06:26 runpilot2-wrapper.sh
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc      5654 Jul  4 06:27 queuedata.json
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc       100 Jul  4 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-07-04 14:13:54] -rwxr-xr-x. 1 boinc boinc      7986 Jul  4 06:40 run_atlas
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc       105 Jul  4 06:40 job.xml
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc      6346 Jul  4 06:40 init_data.xml
[2024-07-04 14:13:54] -rw-r--r--. 2 boinc boinc 664689847 Jul  4 06:40 EVNT.40174968._000007.pool.root.1
[2024-07-04 14:13:54] -rw-r--r--. 2 boinc boinc     17537 Jul  4 06:40 start_atlas.sh
[2024-07-04 14:13:54] drwxrwx--x. 2 boinc boinc        68 Jul  4 06:40 shared
[2024-07-04 14:13:54] -rw-r--r--. 2 boinc boinc    482471 Jul  4 06:40 input.tar.gz
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc         0 Jul  4 06:40 boinc_lockfile
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc      2552 Jul  4 06:40 pandaJob.out
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc       424 Jul  4 06:40 setup.sh.local
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc   1033424 Jul  4 06:40 agis_schedconf.cvmfs.json
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc   1328502 Jul  4 06:40 cric_ddmendpoints.json
[2024-07-04 14:13:54] drwx------. 4 boinc boinc      4096 Jul  4 06:40 pilot3
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc 328357937 Jul  4 14:05 HITS.40174970._000174.pool.root.1
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc       533 Jul  4 14:05 boinc_task_state.xml
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc      1025 Jul  4 14:06 memory_monitor_summary.json
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc         0 Jul  4 14:06 agis_ddmendpoints.agis.ALL.json
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc    517830 Jul  4 14:06 log.40174970._000174.job.log.tgz.1
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc        95 Jul  4 14:08 pilot_heartbeat.json
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc      7700 Jul  4 14:08 heartbeat.json
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc      4397 Jul  4 14:08 pilotlog.txt
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc   2410764 Jul  4 14:08 log.40174970._000174.job.log.1
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc       357 Jul  4 14:08 output.list
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc       620 Jul  4 14:08 runtime_log
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc   2949120 Jul  4 14:08 result.tar.gz
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc     10999 Jul  4 14:08 runtime_log.err
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc       647 Jul  4 14:08 ruDMDmBETj5n7Olcko1bjSoqABFKDmABFKDmOtvXDmPQsKDmvWocGo.diag
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc      8192 Jul  4 14:13 boinc_mmap_file
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc        29 Jul  4 14:13 wrapper_checkpoint.txt
[2024-07-04 14:13:54] -rw-r--r--. 1 boinc boinc     21443 Jul  4 14:13 stderr.txt
[2024-07-04 14:13:54] HITS file was successfully produced:
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc 328357937 Jul  4 14:05 shared/HITS.pool.root.1
[2024-07-04 14:13:54]  *** Contents of shared directory: ***
[2024-07-04 14:13:54] total 973148
[2024-07-04 14:13:54] -rw-r--r--. 2 boinc boinc 664689847 Jul  4 06:40 ATLAS.root_0
[2024-07-04 14:13:54] -rw-r--r--. 2 boinc boinc     17537 Jul  4 06:40 start_atlas.sh
[2024-07-04 14:13:54] -rw-r--r--. 2 boinc boinc    482471 Jul  4 06:40 input.tar.gz
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc 328357937 Jul  4 14:05 HITS.pool.root.1
[2024-07-04 14:13:54] -rw-------. 1 boinc boinc   2949120 Jul  4 14:08 result.tar.gz
14:13:56 (9574): run_atlas exited; CPU time 103808.554116
14:13:56 (9574): called boinc_finish(0)

</stderr_txt>
]]>

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