Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:09:26 (52585): wrapper (7.7.26015): starting
20:09:26 (52585): wrapper: running run_atlas (--nthreads 8)
[2024-07-03 20:09:26] Arguments: --nthreads 8
[2024-07-03 20:09:26] Threads: 8
[2024-07-03 20:09:26] Checking for CVMFS
[2024-07-03 20:09:26] Probing /cvmfs/atlas.cern.ch... OK
[2024-07-03 20:09:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-07-03 20:09:26] Running cvmfs_config stat atlas.cern.ch
[2024-07-03 20:09:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-07-03 20:09:27] 2.11.2.0 63312 7416 131700 134589 3 302 12044558 18432000 8481 130560 0 18457483 98.343 75342442 53708 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-07-03 20:09:27] CVMFS is ok
[2024-07-03 20:09:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-07-03 20:09:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-07-03 20:09:27] Further information can be found at the LHC@home message board.
[2024-07-03 20:09:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-07-03 20:09:27] Checking for apptainer binary...
[2024-07-03 20:09:27] Using apptainer found in PATH at /usr/bin/apptainer
[2024-07-03 20:09:27] Running /usr/bin/apptainer --version
[2024-07-03 20:09:27] apptainer version 1.3.2-1.el7
[2024-07-03 20:09:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-07-03 20:09:27] c-212-10.aglt2.org
[2024-07-03 20:09:27] apptainer works
[2024-07-03 20:09:27] Set ATHENA_PROC_NUMBER=8
[2024-07-03 20:09:27] Set ATHENA_CORE_NUMBER=8
[2024-07-03 20:09:27] Starting ATLAS job with PandaID=6252932718
[2024-07-03 20:09:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-07-03 23:28:55]  *** The last 200 lines of the pilot log: ***
[2024-07-03 23:28:55] 2024-07-04 03:28:32,484 | INFO     | preparing for final server update for job 6252932718 in state='finished'
[2024-07-03 23:28:55] 2024-07-04 03:28:32,566 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-07-03 23:28:55] 2024-07-04 03:28:32,566 | INFO     | this job has now completed (state=finished)
[2024-07-03 23:28:55] 2024-07-04 03:28:32,566 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-07-03 23:28:55] 2024-07-04 03:28:32,566 | INFO     | job 6252932718 has finished - writing final server update
[2024-07-03 23:28:55] 2024-07-04 03:28:32,567 | INFO     | total number of processed events: 400 (read)
[2024-07-03 23:28:55] 2024-07-04 03:28:32,571 | INFO     | executing command: lscpu
[2024-07-03 23:28:55] 2024-07-04 03:28:32,596 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-07-03 23:28:55] 2024-07-04 03:28:32,596 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-07-03 23:28:55] 2024-07-04 03:28:32,627 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-07-03 23:28:55] 2024-07-04 03:28:34,455 | INFO     | CPU arch script returned: x86-64-v3
[2024-07-03 23:28:55] 2024-07-04 03:28:34,455 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6252932718/memory_monitor_summary.json (trf name=prmon)
[2024-07-03 23:28:55] 2024-07-04 03:28:34,456 | INFO     | extracted standard info from prmon json
[2024-07-03 23:28:55] 2024-07-04 03:28:34,456 | INFO     | extracted standard memory fields from prmon json
[2024-07-03 23:28:55] 2024-07-04 03:28:34,456 | WARNING  | GPU info not found in prmon json
[2024-07-03 23:28:55] 2024-07-04 03:28:34,457 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-07-03 23:28:55] 2024-07-04 03:28:34,457 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-07-03 23:28:55] 2024-07-04 03:28:34,459 | INFO     | fitting pss+swap vs Time
[2024-07-03 23:28:55] 2024-07-04 03:28:34,459 | INFO     | model: linear, x: [1720051797.0, 1720051858.0, 1720051919.0, 1720051980.0, 1720052041.0, 1720052102.0, 1720052163.0, 1720052224.0, 1720052285.0, 1720052346.0, 1720
[2024-07-03 23:28:55] 2024-07-04 03:28:34,460 | INFO     | sum of square deviations: 2334719002.9948916
[2024-07-03 23:28:55] 2024-07-04 03:28:34,460 | INFO     | sum of deviations: 298948841379.9284
[2024-07-03 23:28:55] 2024-07-04 03:28:34,460 | INFO     | mean x: 1720057744.5051022
[2024-07-03 23:28:55] 2024-07-04 03:28:34,460 | INFO     | mean y: 2130847.0714285714
[2024-07-03 23:28:55] 2024-07-04 03:28:34,460 | INFO     | -- intersect: -220242476391.2148
[2024-07-03 23:28:55] 2024-07-04 03:28:34,460 | INFO     | intersect: -220242476391.2148
[2024-07-03 23:28:55] 2024-07-04 03:28:34,460 | INFO     | chi2: 13.068376131378152
[2024-07-03 23:28:55] 2024-07-04 03:28:34,460 | INFO     | model: linear, x: [1720051797.0, 1720051858.0, 1720051919.0, 1720051980.0, 1720052041.0, 1720052102.0, 1720052163.0, 1720052224.0, 1720052285.0, 1720052346.0, 1720
[2024-07-03 23:28:55] 2024-07-04 03:28:34,460 | INFO     | sum of square deviations: 2160557902.9947653
[2024-07-03 23:28:55] 2024-07-04 03:28:34,461 | INFO     | sum of deviations: 301623687626.6022
[2024-07-03 23:28:55] 2024-07-04 03:28:34,461 | INFO     | mean x: 1720057592.0052357
[2024-07-03 23:28:55] 2024-07-04 03:28:34,461 | INFO     | mean y: 2132953.397905759
[2024-07-03 23:28:55] 2024-07-04 03:28:34,461 | INFO     | -- intersect: -240125712318.2452
[2024-07-03 23:28:55] 2024-07-04 03:28:34,461 | INFO     | intersect: -240125712318.2452
[2024-07-03 23:28:55] 2024-07-04 03:28:34,461 | INFO     | chi2: 11.933135490551495
[2024-07-03 23:28:55] 2024-07-04 03:28:34,461 | INFO     | current chi2=11.933135490551495 (change=8.686929649207595 %)
[2024-07-03 23:28:55] 2024-07-04 03:28:34,461 | INFO     | right removable region: 190
[2024-07-03 23:28:55] 2024-07-04 03:28:34,461 | INFO     | model: linear, x: [1720052102.0, 1720052163.0, 1720052224.0, 1720052285.0, 1720052346.0, 1720052407.0, 1720052468.0, 1720052529.0, 1720052590.0, 1720052651.0, 1720
[2024-07-03 23:28:55] 2024-07-04 03:28:34,461 | INFO     | sum of square deviations: 2160557292.9947653
[2024-07-03 23:28:55] 2024-07-04 03:28:34,462 | INFO     | sum of deviations: 248790212702.14127
[2024-07-03 23:28:55] 2024-07-04 03:28:34,462 | INFO     | mean x: 1720057897.0052357
[2024-07-03 23:28:55] 2024-07-04 03:28:34,462 | INFO     | mean y: 2174661.8586387434
[2024-07-03 23:28:55] 2024-07-04 03:28:34,462 | INFO     | -- intersect: -198064116587.8255
[2024-07-03 23:28:55] 2024-07-04 03:28:34,462 | INFO     | intersect: -198064116587.8255
[2024-07-03 23:28:55] 2024-07-04 03:28:34,462 | INFO     | chi2: 10.257779824089106
[2024-07-03 23:28:55] 2024-07-04 03:28:34,462 | INFO     | current chi2=10.257779824089106 (change=21.50685195340065 %)
[2024-07-03 23:28:55] 2024-07-04 03:28:34,462 | INFO     | left removable region: 10
[2024-07-03 23:28:55] 2024-07-04 03:28:34,462 | INFO     | model: linear, x: [1720052407.0, 1720052468.0, 1720052529.0, 1720052590.0, 1720052651.0, 1720052712.0, 1720052773.0, 1720052834.0, 1720052895.0, 1720052956.0, 1720
[2024-07-03 23:28:55] 2024-07-04 03:28:34,462 | INFO     | sum of square deviations: 1808346098.9944415
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | sum of deviations: 212349803026.77783
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | mean x: 1720057866.5055556
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | mean y: 2214261.222222222
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | -- intersect: -201980110554.92856
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | intersect: -201980110554.92856
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | chi2: 7.923187555970813
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | -- intersect: -201980110554.92856
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | current memory leak: 117.43 B/s (using 180 data points, chi2=7.92)
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | ..............................
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | . Timing measurements:
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | . get job = 0 s
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | . initial setup = 1 s
[2024-07-03 23:28:55] 2024-07-04 03:28:34,463 | INFO     | . payload setup = 3 s
[2024-07-03 23:28:55] 2024-07-04 03:28:34,464 | INFO     | . stage-in = 0 s
[2024-07-03 23:28:55] 2024-07-04 03:28:34,464 | INFO     | . payload execution = 11912 s
[2024-07-03 23:28:55] 2024-07-04 03:28:34,464 | INFO     | . stage-out = 1 s
[2024-07-03 23:28:55] 2024-07-04 03:28:34,464 | INFO     | . log creation = 0 s
[2024-07-03 23:28:55] 2024-07-04 03:28:34,464 | INFO     | ..............................
[2024-07-03 23:28:55] 2024-07-04 03:28:34,778 | INFO     | 
[2024-07-03 23:28:55] 2024-07-04 03:28:34,778 | INFO     | job summary report
[2024-07-03 23:28:55] 2024-07-04 03:28:34,778 | INFO     | --------------------------------------------------
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | PanDA job id: 6252932718
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | task id: 40175609
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | errors: (none)
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | status: LOG_TRANSFER = DONE 
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | pilot state: finished 
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | transexitcode: 0
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | exeerrorcode: 0
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | exeerrordiag: 
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | exitcode: 0
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | exitmsg: OK
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | cpuconsumptiontime: 47148 s
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | nevents: 400
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | neventsw: 0
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | pid: 66373
[2024-07-03 23:28:55] 2024-07-04 03:28:34,779 | INFO     | pgrp: 66373
[2024-07-03 23:28:55] 2024-07-04 03:28:34,780 | INFO     | corecount: 8
[2024-07-03 23:28:55] 2024-07-04 03:28:34,780 | INFO     | event service: False
[2024-07-03 23:28:55] 2024-07-04 03:28:34,780 | INFO     | sizes: {0: 2404332, 3: 2404538, 11: 2404566, 11919: 2433846, 11921: 2442806, 11922: 2442862, 11925: 2443160}
[2024-07-03 23:28:55] 2024-07-04 03:28:34,780 | INFO     | --------------------------------------------------
[2024-07-03 23:28:55] 2024-07-04 03:28:34,780 | INFO     | 
[2024-07-03 23:28:55] 2024-07-04 03:28:34,780 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-07-03 23:28:55] 2024-07-04 03:28:34,795 | INFO     | queue jobs had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue payloads had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue data_in had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue data_out had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,797 | INFO     | queue completed_jobids has 1 job(s)
[2024-07-03 23:28:55] 2024-07-04 03:28:34,797 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,797 | INFO     | queue messages had 0 job(s) [purged]
[2024-07-03 23:28:55] 2024-07-04 03:28:34,797 | INFO     | job 6252932718 has completed (purged errors)
[2024-07-03 23:28:55] 2024-07-04 03:28:34,797 | INFO     | overall cleanup function is called
[2024-07-03 23:28:55] 2024-07-04 03:28:35,804 | INFO     | --- collectZombieJob: --- 10, [66373]
[2024-07-03 23:28:55] 2024-07-04 03:28:35,804 | INFO     | zombie collector waiting for pid 66373
[2024-07-03 23:28:55] 2024-07-04 03:28:35,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-07-03 23:28:55] 2024-07-04 03:28:35,852 | WARNING  | process 66373 is no longer using CPU - aborting
[2024-07-03 23:28:55] 2024-07-04 03:28:35,852 | INFO     | aborting job monitoring since job object (job id=6252932718) has expired
[2024-07-03 23:28:55] 2024-07-04 03:28:36,810 | INFO     | collected zombie processes
[2024-07-03 23:28:55] 2024-07-04 03:28:36,810 | INFO     | will now attempt to kill all subprocesses of pid=66373
[2024-07-03 23:28:55] 2024-07-04 03:28:36,872 | INFO     | process IDs to be killed: [66373] (in reverse order)
[2024-07-03 23:28:55] 2024-07-04 03:28:36,915 | WARNING  | found no corresponding commands to process id(s)
[2024-07-03 23:28:55] 2024-07-04 03:28:36,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-07-03 23:28:55] 2024-07-04 03:28:36,921 | INFO     | did not find any defunct processes belonging to 66373
[2024-07-03 23:28:55] 2024-07-04 03:28:36,925 | INFO     | did not find any defunct processes belonging to 66373
[2024-07-03 23:28:55] 2024-07-04 03:28:36,926 | INFO     | ready for new job
[2024-07-03 23:28:55] 2024-07-04 03:28:36,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-07-03 23:28:55] 2024-07-04 03:28:36,927 | INFO     | *************************************
[2024-07-03 23:28:55] 2024-07-04 03:28:36,927 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-07-03 23:28:55] 2024-07-04 03:28:36,927 | INFO     | *************************************
[2024-07-03 23:28:55] 2024-07-04 03:28:36,927 | INFO     | 
[2024-07-03 23:28:55] 2024-07-04 03:28:36,930 | INFO     | architecture information:
[2024-07-03 23:28:55] 2024-07-04 03:28:36,930 | INFO     | executing command: cat /etc/os-release
[2024-07-03 23:28:55] 2024-07-04 03:28:36,939 | INFO     | cat /etc/os-release:
[2024-07-03 23:28:55] NAME="CentOS Linux"
[2024-07-03 23:28:55] VERSION="7 (Core)"
[2024-07-03 23:28:55] ID="centos"
[2024-07-03 23:28:55] ID_LIKE="rhel fedora"
[2024-07-03 23:28:55] VERSION_ID="7"
[2024-07-03 23:28:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-07-03 23:28:55] ANSI_COLOR="0;31"
[2024-07-03 23:28:55] CPE_NAME="cpe:/o:centos:centos:7"
[2024-07-03 23:28:55] HOME_URL="https://www.centos.org/"
[2024-07-03 23:28:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-07-03 23:28:55] 
[2024-07-03 23:28:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-07-03 23:28:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-07-03 23:28:55] REDHAT_SUPPORT_PRODUCT="centos"
[2024-07-03 23:28:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-07-03 23:28:55] 
[2024-07-03 23:28:55] 2024-07-04 03:28:36,939 | INFO     | *************************************
[2024-07-03 23:28:55] 2024-07-04 03:28:37,442 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-07-03 23:28:55] 2024-07-04 03:28:37,451 | INFO     | sufficient remaining disk space (104007204864 B)
[2024-07-03 23:28:55] 2024-07-04 03:28:37,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-07-03 23:28:55] 2024-07-04 03:28:37,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-07-03 23:28:55] 2024-07-04 03:28:37,451 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-07-03 23:28:55] 2024-07-04 03:28:37,451 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-07-03 23:28:55] 2024-07-04 03:28:37,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-07-03 23:28:55] 2024-07-04 03:28:37,452 | INFO     | found 0 job(s) in 20 queues
[2024-07-03 23:28:55] 2024-07-04 03:28:37,452 | INFO     | aborting loop
[2024-07-03 23:28:55] 2024-07-04 03:28:37,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-07-03 23:28:55] 2024-07-04 03:28:37,452 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-07-03 23:28:55] 2024-07-04 03:28:37,747 | INFO     | all data control threads have been joined
[2024-07-03 23:28:55] 2024-07-04 03:28:37,756 | INFO     | all payload control threads have been joined
[2024-07-03 23:28:55] 2024-07-04 03:28:37,973 | INFO     | all job control threads have been joined
[2024-07-03 23:28:55] 2024-07-04 03:28:38,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-07-03 23:28:55] 2024-07-04 03:28:38,456 | INFO     | [job] retrieve thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:38,457 | INFO     | [job] job monitor thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:38,751 | INFO     | [data] control thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:38,762 | INFO     | [payload] control thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:38,775 | INFO     | [payload] failed_post thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:38,779 | INFO     | [data] copytool_in thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:38,877 | INFO     | [job] create_data_payload thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:38,978 | INFO     | [job] control thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:39,133 | INFO     | [payload] execute_payloads thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:39,150 | INFO     | [job] validate thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:39,453 | INFO     | [data] copytool_out thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:39,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-07-03 23:28:55] 2024-07-04 03:28:39,743 | INFO     | [payload] validate_post thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:39,877 | INFO     | [payload] validate_pre thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:40,520 | INFO     | [job] queue monitor thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:42,102 | INFO     | [data] queue_monitor thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:48,118 | INFO     | job.realtimelogging is not enabled
[2024-07-03 23:28:55] 2024-07-04 03:28:49,123 | INFO     | [payload] run_realtimelog thread has finished
[2024-07-03 23:28:55] 2024-07-04 03:28:50,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194097813312)>', '<ExcThread(monitor, started 140193663264512)>']
[2024-07-03 23:28:55] 2024-07-04 03:28:50,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-07-03 23:28:55] 2024-07-04 03:28:50,518 | INFO     | [monitor] control thread has ended
[2024-07-03 23:28:55] 2024-07-04 03:28:55,028 | INFO     | all workflow threads have been joined
[2024-07-03 23:28:55] 2024-07-04 03:28:55,028 | INFO     | end of generic workflow (traces error code: 0)
[2024-07-03 23:28:55] 2024-07-04 03:28:55,028 | INFO     | traces error code: 0
[2024-07-03 23:28:55] 2024-07-04 03:28:55,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-07-03 23:28:55] 2024-07-04 03:28:55,096 [wrapper] ==== pilot stdout END ====
[2024-07-03 23:28:55] 2024-07-04 03:28:55,098 [wrapper] ==== wrapper stdout RESUME ====
[2024-07-03 23:28:55] 2024-07-04 03:28:55,099 [wrapper] pilotpid: 57725
[2024-07-03 23:28:55] 2024-07-04 03:28:55,100 [wrapper] Pilot exit status: 0
[2024-07-03 23:28:55] 2024-07-04 03:28:55,105 [wrapper] pandaids: 6252932718
[2024-07-03 23:28:55] 2024-07-04 03:28:55,136 [wrapper] cleanup supervisor_pilot 22789 57726
[2024-07-03 23:28:55] 2024-07-04 03:28:55,138 [wrapper] Test setup, not cleaning
[2024-07-03 23:28:55] 2024-07-04 03:28:55,139 [wrapper] ==== wrapper stdout END ====
[2024-07-03 23:28:55] 2024-07-04 03:28:55,140 [wrapper] ==== wrapper stderr END ====
[2024-07-03 23:28:55] 2024-07-04 03:28:55,143 [wrapper] apfmon messages muted
[2024-07-03 23:28:55]  *** Error codes and diagnostics ***
[2024-07-03 23:28:55]     "exeErrorCode": 0,
[2024-07-03 23:28:55]     "exeErrorDiag": "",
[2024-07-03 23:28:55]     "pilotErrorCode": 0,
[2024-07-03 23:28:55]     "pilotErrorDiag": "",
[2024-07-03 23:28:55]  *** Listing of results directory ***
[2024-07-03 23:28:55] total 483824
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas    469766 Jul  3 19:44 pilot3.tar.gz
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas      5654 Jul  3 20:04 queuedata.json
[2024-07-03 23:28:55] -rwx------ 1 boincer umatlas     32220 Jul  3 20:04 runpilot2-wrapper.sh
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas       100 Jul  3 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-07-03 23:28:55] -rwxr-xr-x 1 boincer umatlas      7986 Jul  3 20:09 run_atlas
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas       105 Jul  3 20:09 job.xml
[2024-07-03 23:28:55] -rw-r--r-- 2 boincer umatlas 307040574 Jul  3 20:09 EVNT.40175607._000004.pool.root.1
[2024-07-03 23:28:55] -rw-r--r-- 2 boincer umatlas     17537 Jul  3 20:09 start_atlas.sh
[2024-07-03 23:28:55] drwxrwx--x 2 boincer umatlas      4096 Jul  3 20:09 shared
[2024-07-03 23:28:55] -rw-r--r-- 2 boincer umatlas    482463 Jul  3 20:09 input.tar.gz
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas         0 Jul  3 20:09 boinc_lockfile
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas      2523 Jul  3 20:09 pandaJob.out
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas       467 Jul  3 20:09 setup.sh.local
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas   1033408 Jul  3 20:09 agis_schedconf.cvmfs.json
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas   1328502 Jul  3 20:09 cric_ddmendpoints.json
[2024-07-03 23:28:55] drwx------ 4 boincer umatlas      4096 Jul  3 20:09 pilot3
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas      6388 Jul  3 23:27 init_data.xml
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas 181927971 Jul  3 23:28 HITS.40175609._000084.pool.root.1
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas       531 Jul  3 23:28 boinc_task_state.xml
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas        95 Jul  3 23:28 pilot_heartbeat.json
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas      1072 Jul  3 23:28 memory_monitor_summary.json
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas         0 Jul  3 23:28 agis_ddmendpoints.agis.ALL.json
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas    368984 Jul  3 23:28 log.40175609._000084.job.log.tgz.1
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas      7733 Jul  3 23:28 heartbeat.json
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas      8192 Jul  3 23:28 boinc_mmap_file
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas        28 Jul  3 23:28 wrapper_checkpoint.txt
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas      4407 Jul  3 23:28 pilotlog.txt
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas   1081539 Jul  3 23:28 log.40175609._000084.job.log.1
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas       357 Jul  3 23:28 output.list
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas       620 Jul  3 23:28 runtime_log
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas   1474560 Jul  3 23:28 result.tar.gz
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas     11405 Jul  3 23:28 runtime_log.err
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas       649 Jul  3 23:28 oaYNDml8Oj5n7Olcko1bjSoqABFKDmABFKDmOtvXDmrJsKDmA3RqMm.diag
[2024-07-03 23:28:55] -rw-r--r-- 1 boincer umatlas     21782 Jul  3 23:28 stderr.txt
[2024-07-03 23:28:55] HITS file was successfully produced:
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas 181927971 Jul  3 23:28 shared/HITS.pool.root.1
[2024-07-03 23:28:55]  *** Contents of shared directory: ***
[2024-07-03 23:28:55] total 479456
[2024-07-03 23:28:55] -rw-r--r-- 2 boincer umatlas 307040574 Jul  3 20:09 ATLAS.root_0
[2024-07-03 23:28:55] -rw-r--r-- 2 boincer umatlas     17537 Jul  3 20:09 start_atlas.sh
[2024-07-03 23:28:55] -rw-r--r-- 2 boincer umatlas    482463 Jul  3 20:09 input.tar.gz
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas 181927971 Jul  3 23:28 HITS.pool.root.1
[2024-07-03 23:28:55] -rw------- 1 boincer umatlas   1474560 Jul  3 23:28 result.tar.gz
23:28:56 (52585): run_atlas exited; CPU time 46611.162665
23:28:56 (52585): called boinc_finish(0)

</stderr_txt>
]]>

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