Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:08:55 (19960): wrapper (7.7.26015): starting
20:08:55 (19960): wrapper: running run_atlas (--nthreads 8)
[2024-07-03 20:08:55] Arguments: --nthreads 8
[2024-07-03 20:08:55] Threads: 8
[2024-07-03 20:08:55] Checking for CVMFS
[2024-07-03 20:08:56] Probing /cvmfs/atlas.cern.ch... OK
[2024-07-03 20:08:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-07-03 20:08:56] Running cvmfs_config stat atlas.cern.ch
[2024-07-03 20:08:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-07-03 20:08:56] 2.11.2.0 63312 7416 131824 134589 0 302 12044558 18432000 8190 130560 0 18367968 98.335 75342441 53708 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-07-03 20:08:56] CVMFS is ok
[2024-07-03 20:08:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-07-03 20:08:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-07-03 20:08:56] Further information can be found at the LHC@home message board.
[2024-07-03 20:08:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-07-03 20:08:56] Checking for apptainer binary...
[2024-07-03 20:08:56] Using apptainer found in PATH at /usr/bin/apptainer
[2024-07-03 20:08:56] Running /usr/bin/apptainer --version
[2024-07-03 20:08:56] apptainer version 1.3.2-1.el7
[2024-07-03 20:08:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-07-03 20:08:56] c-212-10.aglt2.org
[2024-07-03 20:08:56] apptainer works
[2024-07-03 20:08:56] Set ATHENA_PROC_NUMBER=8
[2024-07-03 20:08:56] Set ATHENA_CORE_NUMBER=8
[2024-07-03 20:08:56] Starting ATLAS job with PandaID=6252932717
[2024-07-03 20:08:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-07-03 23:19:40]  *** The last 200 lines of the pilot log: ***
[2024-07-03 23:19:40] 2024-07-04 03:19:04,259 | INFO     | stage-out finished correctly
[2024-07-03 23:19:40] 2024-07-04 03:19:05,205 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-07-03 23:19:40] 2024-07-04 03:19:05,270 | INFO     | job 6252932717 has state=finished
[2024-07-03 23:19:40] 2024-07-04 03:19:05,270 | INFO     | preparing for final server update for job 6252932717 in state='finished'
[2024-07-03 23:19:40] 2024-07-04 03:19:05,270 | INFO     | this job has now completed (state=finished)
[2024-07-03 23:19:40] 2024-07-04 03:19:05,270 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-07-03 23:19:40] 2024-07-04 03:19:05,271 | INFO     | job 6252932717 has finished - writing final server update
[2024-07-03 23:19:40] 2024-07-04 03:19:05,271 | INFO     | total number of processed events: 400 (read)
[2024-07-03 23:19:40] 2024-07-04 03:19:05,275 | INFO     | executing command: lscpu
[2024-07-03 23:19:40] 2024-07-04 03:19:05,310 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-07-03 23:19:40] 2024-07-04 03:19:05,310 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-07-03 23:19:40] 2024-07-04 03:19:05,364 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-07-03 23:19:40] 2024-07-04 03:19:24,114 | INFO     | CPU arch script returned: x86-64-v3
[2024-07-03 23:19:40] 2024-07-04 03:19:24,118 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6252932717/memory_monitor_summary.json (trf name=prmon)
[2024-07-03 23:19:40] 2024-07-04 03:19:24,120 | INFO     | extracted standard info from prmon json
[2024-07-03 23:19:40] 2024-07-04 03:19:24,120 | INFO     | extracted standard memory fields from prmon json
[2024-07-03 23:19:40] 2024-07-04 03:19:24,120 | WARNING  | GPU info not found in prmon json
[2024-07-03 23:19:40] 2024-07-04 03:19:24,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-07-03 23:19:40] 2024-07-04 03:19:24,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-07-03 23:19:40] 2024-07-04 03:19:24,124 | INFO     | fitting pss+swap vs Time
[2024-07-03 23:19:40] 2024-07-04 03:19:24,124 | INFO     | model: linear, x: [1720051767.0, 1720051828.0, 1720051889.0, 1720051950.0, 1720052011.0, 1720052072.0, 1720052133.0, 1720052194.0, 1720052255.0, 1720052316.0, 1720
[2024-07-03 23:19:40] 2024-07-04 03:19:24,124 | INFO     | sum of square deviations: 2027628910.737959
[2024-07-03 23:19:40] 2024-07-04 03:19:24,125 | INFO     | sum of deviations: 281338889781.0909
[2024-07-03 23:19:40] 2024-07-04 03:19:24,125 | INFO     | mean x: 1720057440.0374331
[2024-07-03 23:19:40] 2024-07-04 03:19:24,125 | INFO     | mean y: 2149899.272727273
[2024-07-03 23:19:40] 2024-07-04 03:19:24,125 | INFO     | -- intersect: -238660382468.99658
[2024-07-03 23:19:40] 2024-07-04 03:19:24,125 | INFO     | intersect: -238660382468.99658
[2024-07-03 23:19:40] 2024-07-04 03:19:24,125 | INFO     | chi2: 12.63504625894948
[2024-07-03 23:19:40] 2024-07-04 03:19:24,125 | INFO     | model: linear, x: [1720051767.0, 1720051828.0, 1720051889.0, 1720051950.0, 1720052011.0, 1720052072.0, 1720052133.0, 1720052194.0, 1720052255.0, 1720052316.0, 1720
[2024-07-03 23:19:40] 2024-07-04 03:19:24,126 | INFO     | sum of square deviations: 1869293193.2307718
[2024-07-03 23:19:40] 2024-07-04 03:19:24,126 | INFO     | sum of deviations: 271746058721.30774
[2024-07-03 23:19:40] 2024-07-04 03:19:24,127 | INFO     | mean x: 1720057287.5384614
[2024-07-03 23:19:40] 2024-07-04 03:19:24,127 | INFO     | mean y: 2140658.3846153845
[2024-07-03 23:19:40] 2024-07-04 03:19:24,127 | INFO     | -- intersect: -250048943011.15042
[2024-07-03 23:19:40] 2024-07-04 03:19:24,127 | INFO     | intersect: -250048943011.15042
[2024-07-03 23:19:40] 2024-07-04 03:19:24,127 | INFO     | chi2: 12.413668537081755
[2024-07-03 23:19:40] 2024-07-04 03:19:24,127 | INFO     | current chi2=12.413668537081755 (change=1.752092689893572 %)
[2024-07-03 23:19:40] 2024-07-04 03:19:24,127 | INFO     | right removable region: 181
[2024-07-03 23:19:40] 2024-07-04 03:19:24,127 | INFO     | model: linear, x: [1720052072.0, 1720052133.0, 1720052194.0, 1720052255.0, 1720052316.0, 1720052377.0, 1720052438.0, 1720052499.0, 1720052560.0, 1720052621.0, 1720
[2024-07-03 23:19:40] 2024-07-04 03:19:24,127 | INFO     | sum of square deviations: 1869288923.2307718
[2024-07-03 23:19:40] 2024-07-04 03:19:24,128 | INFO     | sum of deviations: 232965245827.76923
[2024-07-03 23:19:40] 2024-07-04 03:19:24,128 | INFO     | mean x: 1720057592.5384614
[2024-07-03 23:19:40] 2024-07-04 03:19:24,128 | INFO     | mean y: 2196373.532967033
[2024-07-03 23:19:40] 2024-07-04 03:19:24,128 | INFO     | -- intersect: -214364686618.0343
[2024-07-03 23:19:40] 2024-07-04 03:19:24,128 | INFO     | intersect: -214364686618.0343
[2024-07-03 23:19:40] 2024-07-04 03:19:24,128 | INFO     | chi2: 9.738942604375612
[2024-07-03 23:19:40] 2024-07-04 03:19:24,128 | INFO     | current chi2=9.738942604375612 (change=22.92119550035315 %)
[2024-07-03 23:19:40] 2024-07-04 03:19:24,128 | INFO     | left removable region: 10
[2024-07-03 23:19:40] 2024-07-04 03:19:24,129 | INFO     | model: linear, x: [1720052377.0, 1720052438.0, 1720052499.0, 1720052560.0, 1720052621.0, 1720052682.0, 1720052743.0, 1720052804.0, 1720052865.0, 1720052926.0, 1720
[2024-07-03 23:19:40] 2024-07-04 03:19:24,129 | INFO     | sum of square deviations: 1550416394.7134514
[2024-07-03 23:19:40] 2024-07-04 03:19:24,129 | INFO     | sum of deviations: 186415359498.35672
[2024-07-03 23:19:40] 2024-07-04 03:19:24,129 | INFO     | mean x: 1720057562.0409358
[2024-07-03 23:19:40] 2024-07-04 03:19:24,129 | INFO     | mean y: 2226700.5204678364
[2024-07-03 23:19:40] 2024-07-04 03:19:24,129 | INFO     | -- intersect: -206810052812.93875
[2024-07-03 23:19:40] 2024-07-04 03:19:24,129 | INFO     | intersect: -206810052812.93875
[2024-07-03 23:19:40] 2024-07-04 03:19:24,130 | INFO     | chi2: 8.20256669910608
[2024-07-03 23:19:40] 2024-07-04 03:19:24,130 | INFO     | -- intersect: -206810052812.93875
[2024-07-03 23:19:40] 2024-07-04 03:19:24,130 | INFO     | current memory leak: 120.24 B/s (using 171 data points, chi2=8.20)
[2024-07-03 23:19:40] 2024-07-04 03:19:24,130 | INFO     | ..............................
[2024-07-03 23:19:40] 2024-07-04 03:19:24,130 | INFO     | . Timing measurements:
[2024-07-03 23:19:40] 2024-07-04 03:19:24,130 | INFO     | . get job = 0 s
[2024-07-03 23:19:40] 2024-07-04 03:19:24,130 | INFO     | . initial setup = 1 s
[2024-07-03 23:19:40] 2024-07-04 03:19:24,131 | INFO     | . payload setup = 4 s
[2024-07-03 23:19:40] 2024-07-04 03:19:24,131 | INFO     | . stage-in = 0 s
[2024-07-03 23:19:40] 2024-07-04 03:19:24,131 | INFO     | . payload execution = 11376 s
[2024-07-03 23:19:40] 2024-07-04 03:19:24,131 | INFO     | . stage-out = 1 s
[2024-07-03 23:19:40] 2024-07-04 03:19:24,131 | INFO     | . log creation = 0 s
[2024-07-03 23:19:40] 2024-07-04 03:19:24,131 | INFO     | ..............................
[2024-07-03 23:19:40] 2024-07-04 03:19:24,175 | INFO     | 
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | job summary report
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | --------------------------------------------------
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | PanDA job id: 6252932717
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | task id: 40175609
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | errors: (none)
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | status: LOG_TRANSFER = DONE 
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | pilot state: finished 
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | transexitcode: 0
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | exeerrorcode: 0
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | exeerrordiag: 
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | exitcode: 0
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | exitmsg: OK
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | cpuconsumptiontime: 46251 s
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | nevents: 400
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | neventsw: 0
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | pid: 41624
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | pgrp: 41624
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | corecount: 8
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | event service: False
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | sizes: {0: 2404332, 3: 2404538, 11: 2404566, 11384: 2433678, 11386: 2442638, 11387: 2442694, 11405: 2442992}
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | --------------------------------------------------
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | 
[2024-07-03 23:19:40] 2024-07-04 03:19:24,176 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2024-07-03 23:19:40] 2024-07-04 03:19:24,225 | WARNING  | process 41624 is no longer using CPU - aborting
[2024-07-03 23:19:40] 2024-07-04 03:19:24,228 | INFO     | aborting job monitoring since job object (job id=6252932717) has expired
[2024-07-03 23:19:40] 2024-07-04 03:19:24,278 | INFO     | queue jobs had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,278 | INFO     | queue payloads had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,278 | INFO     | queue data_in had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,278 | INFO     | queue data_out had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,278 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,278 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,278 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,279 | INFO     | queue completed_jobids has 1 job(s)
[2024-07-03 23:19:40] 2024-07-04 03:19:24,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,279 | INFO     | queue messages had 0 job(s) [purged]
[2024-07-03 23:19:40] 2024-07-04 03:19:24,279 | INFO     | job 6252932717 has completed (purged errors)
[2024-07-03 23:19:40] 2024-07-04 03:19:24,279 | INFO     | overall cleanup function is called
[2024-07-03 23:19:40] 2024-07-04 03:19:25,281 | INFO     | --- collectZombieJob: --- 10, [41624]
[2024-07-03 23:19:40] 2024-07-04 03:19:25,281 | INFO     | zombie collector waiting for pid 41624
[2024-07-03 23:19:40] 2024-07-04 03:19:25,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-07-03 23:19:40] 2024-07-04 03:19:26,281 | INFO     | collected zombie processes
[2024-07-03 23:19:40] 2024-07-04 03:19:26,282 | INFO     | will now attempt to kill all subprocesses of pid=41624
[2024-07-03 23:19:40] 2024-07-04 03:19:26,445 | INFO     | process IDs to be killed: [41624] (in reverse order)
[2024-07-03 23:19:40] 2024-07-04 03:19:26,531 | WARNING  | found no corresponding commands to process id(s)
[2024-07-03 23:19:40] 2024-07-04 03:19:26,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-07-03 23:19:40] 2024-07-04 03:19:26,547 | INFO     | did not find any defunct processes belonging to 41624
[2024-07-03 23:19:40] 2024-07-04 03:19:26,553 | INFO     | did not find any defunct processes belonging to 41624
[2024-07-03 23:19:40] 2024-07-04 03:19:26,553 | INFO     | ready for new job
[2024-07-03 23:19:40] 2024-07-04 03:19:26,553 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-07-03 23:19:40] 2024-07-04 03:19:26,555 | INFO     | *************************************
[2024-07-03 23:19:40] 2024-07-04 03:19:26,555 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-07-03 23:19:40] 2024-07-04 03:19:26,555 | INFO     | *************************************
[2024-07-03 23:19:40] 2024-07-04 03:19:26,555 | INFO     | 
[2024-07-03 23:19:40] 2024-07-04 03:19:26,558 | INFO     | architecture information:
[2024-07-03 23:19:40] 2024-07-04 03:19:26,559 | INFO     | executing command: cat /etc/os-release
[2024-07-03 23:19:40] 2024-07-04 03:19:26,646 | INFO     | cat /etc/os-release:
[2024-07-03 23:19:40] NAME="CentOS Linux"
[2024-07-03 23:19:40] VERSION="7 (Core)"
[2024-07-03 23:19:40] ID="centos"
[2024-07-03 23:19:40] ID_LIKE="rhel fedora"
[2024-07-03 23:19:40] VERSION_ID="7"
[2024-07-03 23:19:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-07-03 23:19:40] ANSI_COLOR="0;31"
[2024-07-03 23:19:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-07-03 23:19:40] HOME_URL="https://www.centos.org/"
[2024-07-03 23:19:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-07-03 23:19:40] 
[2024-07-03 23:19:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-07-03 23:19:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-07-03 23:19:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-07-03 23:19:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-07-03 23:19:40] 
[2024-07-03 23:19:40] 2024-07-04 03:19:26,646 | INFO     | *************************************
[2024-07-03 23:19:40] 2024-07-04 03:19:27,149 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2024-07-03 23:19:40] 2024-07-04 03:19:27,173 | INFO     | sufficient remaining disk space (102652444672 B)
[2024-07-03 23:19:40] 2024-07-04 03:19:27,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-07-03 23:19:40] 2024-07-04 03:19:27,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-07-03 23:19:40] 2024-07-04 03:19:27,396 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-07-03 23:19:40] 2024-07-04 03:19:27,443 | INFO     | all data control threads have been joined
[2024-07-03 23:19:40] 2024-07-04 03:19:27,559 | INFO     | found 0 job(s) in 20 queues
[2024-07-03 23:19:40] 2024-07-04 03:19:27,559 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-07-03 23:19:40] 2024-07-04 03:19:27,559 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-07-03 23:19:40] 2024-07-04 03:19:27,705 | INFO     | all payload control threads have been joined
[2024-07-03 23:19:40] 2024-07-04 03:19:27,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-07-03 23:19:40] 2024-07-04 03:19:27,740 | INFO     | aborting loop
[2024-07-03 23:19:40] 2024-07-04 03:19:27,847 | INFO     | all job control threads have been joined
[2024-07-03 23:19:40] 2024-07-04 03:19:28,180 | INFO     | [job] retrieve thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:28,184 | INFO     | [payload] failed_post thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:28,375 | INFO     | [payload] run_realtimelog thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:28,448 | INFO     | [data] control thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:28,535 | INFO     | [job] create_data_payload thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:28,711 | INFO     | [payload] control thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:28,745 | INFO     | [job] job monitor thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:28,777 | INFO     | [data] copytool_in thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:28,853 | INFO     | [job] control thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:28,924 | INFO     | [payload] validate_pre thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:28,988 | INFO     | [job] validate thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:29,181 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-07-03 23:19:40] 2024-07-04 03:19:29,219 | INFO     | [payload] execute_payloads thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:29,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-07-03 23:19:40] 2024-07-04 03:19:29,403 | INFO     | [data] copytool_out thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:29,404 | INFO     | [payload] validate_post thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:30,187 | INFO     | [job] queue monitor thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:33,290 | INFO     | [data] queue_monitor thread has finished
[2024-07-03 23:19:40] 2024-07-04 03:19:35,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139827055093568)>', '<ExcThread(monitor, started 139826351306496)>']
[2024-07-03 23:19:40] 2024-07-04 03:19:35,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-07-03 23:19:40] 2024-07-04 03:19:35,583 | INFO     | [monitor] control thread has ended
[2024-07-03 23:19:40] 2024-07-04 03:19:40,067 | INFO     | all workflow threads have been joined
[2024-07-03 23:19:40] 2024-07-04 03:19:40,067 | INFO     | end of generic workflow (traces error code: 0)
[2024-07-03 23:19:40] 2024-07-04 03:19:40,067 | INFO     | traces error code: 0
[2024-07-03 23:19:40] 2024-07-04 03:19:40,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-07-03 23:19:40] 2024-07-04 03:19:40,340 [wrapper] ==== pilot stdout END ====
[2024-07-03 23:19:40] 2024-07-04 03:19:40,369 [wrapper] ==== wrapper stdout RESUME ====
[2024-07-03 23:19:40] 2024-07-04 03:19:40,371 [wrapper] pilotpid: 27238
[2024-07-03 23:19:40] 2024-07-04 03:19:40,373 [wrapper] Pilot exit status: 0
[2024-07-03 23:19:40] 2024-07-04 03:19:40,471 [wrapper] pandaids: 6252932717
[2024-07-03 23:19:40] 2024-07-04 03:19:40,521 [wrapper] cleanup supervisor_pilot 58096 27239
[2024-07-03 23:19:40] 2024-07-04 03:19:40,523 [wrapper] Test setup, not cleaning
[2024-07-03 23:19:40] 2024-07-04 03:19:40,524 [wrapper] ==== wrapper stdout END ====
[2024-07-03 23:19:40] 2024-07-04 03:19:40,526 [wrapper] ==== wrapper stderr END ====
[2024-07-03 23:19:40] 2024-07-04 03:19:40,529 [wrapper] apfmon messages muted
[2024-07-03 23:19:40]  *** Error codes and diagnostics ***
[2024-07-03 23:19:40]     "exeErrorCode": 0,
[2024-07-03 23:19:40]     "exeErrorDiag": "",
[2024-07-03 23:19:40]     "pilotErrorCode": 0,
[2024-07-03 23:19:40]     "pilotErrorDiag": "",
[2024-07-03 23:19:40]  *** Listing of results directory ***
[2024-07-03 23:19:40] total 477804
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas    469766 Jul  3 19:44 pilot3.tar.gz
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas      5654 Jul  3 20:04 queuedata.json
[2024-07-03 23:19:40] -rwx------ 1 boincer umatlas     32220 Jul  3 20:04 runpilot2-wrapper.sh
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas       100 Jul  3 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-07-03 23:19:40] -rwxr-xr-x 1 boincer umatlas      7986 Jul  3 20:08 run_atlas
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas       105 Jul  3 20:08 job.xml
[2024-07-03 23:19:40] -rw-r--r-- 2 boincer umatlas 307040574 Jul  3 20:08 EVNT.40175607._000004.pool.root.1
[2024-07-03 23:19:40] -rw-r--r-- 2 boincer umatlas     17537 Jul  3 20:08 start_atlas.sh
[2024-07-03 23:19:40] drwxrwx--x 2 boincer umatlas      4096 Jul  3 20:08 shared
[2024-07-03 23:19:40] -rw-r--r-- 2 boincer umatlas    482464 Jul  3 20:08 input.tar.gz
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas         0 Jul  3 20:08 boinc_lockfile
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas      2523 Jul  3 20:08 pandaJob.out
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas       467 Jul  3 20:08 setup.sh.local
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas   1033408 Jul  3 20:09 agis_schedconf.cvmfs.json
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas   1328502 Jul  3 20:09 cric_ddmendpoints.json
[2024-07-03 23:19:40] drwx------ 4 boincer umatlas      4096 Jul  3 20:09 pilot3
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas      6388 Jul  3 23:11 init_data.xml
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas 175882040 Jul  3 23:18 HITS.40175609._000083.pool.root.1
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas        95 Jul  3 23:18 pilot_heartbeat.json
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas       531 Jul  3 23:18 boinc_task_state.xml
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas      1074 Jul  3 23:18 memory_monitor_summary.json
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas         0 Jul  3 23:19 agis_ddmendpoints.agis.ALL.json
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas    361220 Jul  3 23:19 log.40175609._000083.job.log.tgz.1
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas      7737 Jul  3 23:19 heartbeat.json
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas        28 Jul  3 23:19 wrapper_checkpoint.txt
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas      8192 Jul  3 23:19 boinc_mmap_file
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas      4212 Jul  3 23:19 pilotlog.txt
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas   1036487 Jul  3 23:19 log.40175609._000083.job.log.1
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas       357 Jul  3 23:19 output.list
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas       620 Jul  3 23:19 runtime_log
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas   1413120 Jul  3 23:19 result.tar.gz
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas       650 Jul  3 23:19 viVNDml8Oj5n7Olcko1bjSoqABFKDmABFKDmOtvXDmqJsKDmag7dPn.diag
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas     11405 Jul  3 23:19 runtime_log.err
[2024-07-03 23:19:40] -rw-r--r-- 1 boincer umatlas     21737 Jul  3 23:19 stderr.txt
[2024-07-03 23:19:40] HITS file was successfully produced:
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas 175882040 Jul  3 23:18 shared/HITS.pool.root.1
[2024-07-03 23:19:40]  *** Contents of shared directory: ***
[2024-07-03 23:19:40] total 473488
[2024-07-03 23:19:40] -rw-r--r-- 2 boincer umatlas 307040574 Jul  3 20:08 ATLAS.root_0
[2024-07-03 23:19:40] -rw-r--r-- 2 boincer umatlas     17537 Jul  3 20:08 start_atlas.sh
[2024-07-03 23:19:40] -rw-r--r-- 2 boincer umatlas    482464 Jul  3 20:08 input.tar.gz
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas 175882040 Jul  3 23:18 HITS.pool.root.1
[2024-07-03 23:19:40] -rw------- 1 boincer umatlas   1413120 Jul  3 23:19 result.tar.gz
23:19:42 (19960): run_atlas exited; CPU time 45646.725752
23:19:42 (19960): called boinc_finish(0)

</stderr_txt>
]]>

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