Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:08:19 (73347): wrapper (7.7.26015): starting
20:08:19 (73347): wrapper: running run_atlas (--nthreads 8)
[2024-07-03 20:08:19] Arguments: --nthreads 8
[2024-07-03 20:08:19] Threads: 8
[2024-07-03 20:08:19] Checking for CVMFS
[2024-07-03 20:08:19] Probing /cvmfs/atlas.cern.ch... OK
[2024-07-03 20:08:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-07-03 20:08:19] Running cvmfs_config stat atlas.cern.ch
[2024-07-03 20:08:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-07-03 20:08:20] 2.11.2.0 63312 7415 128856 134589 0 197 11942637 18432000 6594 130560 0 18239521 98.333 75306403 53699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-07-03 20:08:20] CVMFS is ok
[2024-07-03 20:08:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-07-03 20:08:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-07-03 20:08:20] Further information can be found at the LHC@home message board.
[2024-07-03 20:08:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-07-03 20:08:20] Checking for apptainer binary...
[2024-07-03 20:08:20] Using apptainer found in PATH at /usr/bin/apptainer
[2024-07-03 20:08:20] Running /usr/bin/apptainer --version
[2024-07-03 20:08:20] apptainer version 1.3.2-1.el7
[2024-07-03 20:08:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-07-03 20:08:20] c-212-10.aglt2.org
[2024-07-03 20:08:20] apptainer works
[2024-07-03 20:08:20] Set ATHENA_PROC_NUMBER=8
[2024-07-03 20:08:20] Set ATHENA_CORE_NUMBER=8
[2024-07-03 20:08:20] Starting ATLAS job with PandaID=6252932711
[2024-07-03 20:08:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-07-03 23:29:56]  *** The last 200 lines of the pilot log: ***
[2024-07-03 23:29:56] 2024-07-04 03:29:40,567 | INFO     | monitor loop #902: job 0:6252932711 is in state 'finished'
[2024-07-03 23:29:56] 2024-07-04 03:29:40,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-07-03 23:29:56] 2024-07-04 03:29:41,537 | INFO     | job 6252932711 has state=finished
[2024-07-03 23:29:56] 2024-07-04 03:29:41,537 | INFO     | preparing for final server update for job 6252932711 in state='finished'
[2024-07-03 23:29:56] 2024-07-04 03:29:41,538 | INFO     | this job has now completed (state=finished)
[2024-07-03 23:29:56] 2024-07-04 03:29:41,538 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-07-03 23:29:56] 2024-07-04 03:29:41,538 | INFO     | job 6252932711 has finished - writing final server update
[2024-07-03 23:29:56] 2024-07-04 03:29:41,538 | INFO     | total number of processed events: 400 (read)
[2024-07-03 23:29:56] 2024-07-04 03:29:41,542 | INFO     | executing command: lscpu
[2024-07-03 23:29:56] 2024-07-04 03:29:41,569 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-07-03 23:29:56] 2024-07-04 03:29:41,569 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-07-03 23:29:56] 2024-07-04 03:29:41,589 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-07-03 23:29:56] 2024-07-04 03:29:43,071 | INFO     | monitor loop #903: job 0:6252932711 is in state 'finished'
[2024-07-03 23:29:56] 2024-07-04 03:29:43,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-07-03 23:29:56] 2024-07-04 03:29:43,436 | INFO     | CPU arch script returned: x86-64-v3
[2024-07-03 23:29:56] 2024-07-04 03:29:43,436 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6252932711/memory_monitor_summary.json (trf name=prmon)
[2024-07-03 23:29:56] 2024-07-04 03:29:43,437 | INFO     | extracted standard info from prmon json
[2024-07-03 23:29:56] 2024-07-04 03:29:43,437 | INFO     | extracted standard memory fields from prmon json
[2024-07-03 23:29:56] 2024-07-04 03:29:43,437 | WARNING  | GPU info not found in prmon json
[2024-07-03 23:29:56] 2024-07-04 03:29:43,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-07-03 23:29:56] 2024-07-04 03:29:43,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-07-03 23:29:56] 2024-07-04 03:29:43,441 | INFO     | fitting pss+swap vs Time
[2024-07-03 23:29:56] 2024-07-04 03:29:43,441 | INFO     | model: linear, x: [1720051730.0, 1720051791.0, 1720051852.0, 1720051913.0, 1720051974.0, 1720052035.0, 1720052096.0, 1720052157.0, 1720052218.0, 1720052279.0, 1720
[2024-07-03 23:29:56] 2024-07-04 03:29:43,441 | INFO     | sum of square deviations: 2406906135.3181987
[2024-07-03 23:29:56] 2024-07-04 03:29:43,442 | INFO     | sum of deviations: 307995661243.394
[2024-07-03 23:29:56] 2024-07-04 03:29:43,442 | INFO     | mean x: 1720057738.530303
[2024-07-03 23:29:56] 2024-07-04 03:29:43,442 | INFO     | mean y: 2152837.767676768
[2024-07-03 23:29:56] 2024-07-04 03:29:43,442 | INFO     | -- intersect: -220102118276.82678
[2024-07-03 23:29:56] 2024-07-04 03:29:43,442 | INFO     | intersect: -220102118276.82678
[2024-07-03 23:29:56] 2024-07-04 03:29:43,442 | INFO     | chi2: 12.87537571135178
[2024-07-03 23:29:56] 2024-07-04 03:29:43,442 | INFO     | model: linear, x: [1720051730.0, 1720051791.0, 1720051852.0, 1720051913.0, 1720051974.0, 1720052035.0, 1720052096.0, 1720052157.0, 1720052218.0, 1720052279.0, 1720
[2024-07-03 23:29:56] 2024-07-04 03:29:43,442 | INFO     | sum of square deviations: 2229127887.81348
[2024-07-03 23:29:56] 2024-07-04 03:29:43,443 | INFO     | sum of deviations: 297918458090.71515
[2024-07-03 23:29:56] 2024-07-04 03:29:43,443 | INFO     | mean x: 1720057586.031088
[2024-07-03 23:29:56] 2024-07-04 03:29:43,443 | INFO     | mean y: 2144192.8808290157
[2024-07-03 23:29:56] 2024-07-04 03:29:43,443 | INFO     | -- intersect: -229880092110.87003
[2024-07-03 23:29:56] 2024-07-04 03:29:43,443 | INFO     | intersect: -229880092110.87003
[2024-07-03 23:29:56] 2024-07-04 03:29:43,444 | INFO     | chi2: 12.677370636878278
[2024-07-03 23:29:56] 2024-07-04 03:29:43,444 | INFO     | current chi2=12.677370636878278 (change=1.537858614090205 %)
[2024-07-03 23:29:56] 2024-07-04 03:29:43,444 | INFO     | right removable region: 192
[2024-07-03 23:29:56] 2024-07-04 03:29:43,444 | INFO     | model: linear, x: [1720052035.0, 1720052096.0, 1720052157.0, 1720052218.0, 1720052279.0, 1720052340.0, 1720052401.0, 1720052462.0, 1720052523.0, 1720052584.0, 1720
[2024-07-03 23:29:56] 2024-07-04 03:29:43,444 | INFO     | sum of square deviations: 2229124227.81348
[2024-07-03 23:29:56] 2024-07-04 03:29:43,445 | INFO     | sum of deviations: 256808023053.23846
[2024-07-03 23:29:56] 2024-07-04 03:29:43,445 | INFO     | mean x: 1720057891.031088
[2024-07-03 23:29:56] 2024-07-04 03:29:43,445 | INFO     | mean y: 2196642.6269430052
[2024-07-03 23:29:56] 2024-07-04 03:29:43,445 | INFO     | -- intersect: -198158435690.59146
[2024-07-03 23:29:56] 2024-07-04 03:29:43,445 | INFO     | intersect: -198158435690.59146
[2024-07-03 23:29:56] 2024-07-04 03:29:43,445 | INFO     | chi2: 9.959448972915252
[2024-07-03 23:29:56] 2024-07-04 03:29:43,445 | INFO     | current chi2=9.959448972915252 (change=22.64731378569135 %)
[2024-07-03 23:29:56] 2024-07-04 03:29:43,445 | INFO     | left removable region: 10
[2024-07-03 23:29:56] 2024-07-04 03:29:43,446 | INFO     | model: linear, x: [1720052340.0, 1720052401.0, 1720052462.0, 1720052523.0, 1720052584.0, 1720052645.0, 1720052706.0, 1720052767.0, 1720052828.0, 1720052889.0, 1720
[2024-07-03 23:29:56] 2024-07-04 03:29:43,446 | INFO     | sum of square deviations: 1869279707.302193
[2024-07-03 23:29:56] 2024-07-04 03:29:43,446 | INFO     | sum of deviations: 207644680199.37933
[2024-07-03 23:29:56] 2024-07-04 03:29:43,446 | INFO     | mean x: 1720057860.532967
[2024-07-03 23:29:56] 2024-07-04 03:29:43,446 | INFO     | mean y: 2224872.686813187
[2024-07-03 23:29:56] 2024-07-04 03:29:43,446 | INFO     | -- intersect: -191066486235.4347
[2024-07-03 23:29:56] 2024-07-04 03:29:43,447 | INFO     | intersect: -191066486235.4347
[2024-07-03 23:29:56] 2024-07-04 03:29:43,447 | INFO     | chi2: 8.44734905559655
[2024-07-03 23:29:56] 2024-07-04 03:29:43,447 | INFO     | -- intersect: -191066486235.4347
[2024-07-03 23:29:56] 2024-07-04 03:29:43,447 | INFO     | current memory leak: 111.08 B/s (using 182 data points, chi2=8.45)
[2024-07-03 23:29:56] 2024-07-04 03:29:43,447 | INFO     | ..............................
[2024-07-03 23:29:56] 2024-07-04 03:29:43,447 | INFO     | . Timing measurements:
[2024-07-03 23:29:56] 2024-07-04 03:29:43,447 | INFO     | . get job = 0 s
[2024-07-03 23:29:56] 2024-07-04 03:29:43,447 | INFO     | . initial setup = 1 s
[2024-07-03 23:29:56] 2024-07-04 03:29:43,447 | INFO     | . payload setup = 4 s
[2024-07-03 23:29:56] 2024-07-04 03:29:43,447 | INFO     | . stage-in = 0 s
[2024-07-03 23:29:56] 2024-07-04 03:29:43,447 | INFO     | . payload execution = 12045 s
[2024-07-03 23:29:56] 2024-07-04 03:29:43,448 | INFO     | . stage-out = 1 s
[2024-07-03 23:29:56] 2024-07-04 03:29:43,448 | INFO     | . log creation = 0 s
[2024-07-03 23:29:56] 2024-07-04 03:29:43,448 | INFO     | ..............................
[2024-07-03 23:29:56] 2024-07-04 03:29:43,498 | INFO     | 
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | job summary report
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | --------------------------------------------------
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | PanDA job id: 6252932711
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | task id: 40175609
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | errors: (none)
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | status: LOG_TRANSFER = DONE 
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | pilot state: finished 
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | transexitcode: 0
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | exeerrorcode: 0
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | exeerrordiag: 
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | exitcode: 0
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | exitmsg: OK
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | cpuconsumptiontime: 47115 s
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | nevents: 400
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | neventsw: 0
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | pid: 11475
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | pgrp: 11475
[2024-07-03 23:29:56] 2024-07-04 03:29:43,499 | INFO     | corecount: 8
[2024-07-03 23:29:56] 2024-07-04 03:29:43,500 | INFO     | event service: False
[2024-07-03 23:29:56] 2024-07-04 03:29:43,500 | INFO     | sizes: {0: 2404330, 3: 2404536, 11: 2404564, 12053: 2434120, 12054: 2434119, 12057: 2443319, 12061: 2443433}
[2024-07-03 23:29:56] 2024-07-04 03:29:43,500 | INFO     | --------------------------------------------------
[2024-07-03 23:29:56] 2024-07-04 03:29:43,500 | INFO     | 
[2024-07-03 23:29:56] 2024-07-04 03:29:43,500 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-07-03 23:29:56] 2024-07-04 03:29:43,517 | INFO     | queue jobs had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,517 | INFO     | queue payloads had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue data_in had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue data_out had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue completed_jobids has 1 job(s)
[2024-07-03 23:29:56] 2024-07-04 03:29:43,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,519 | INFO     | queue messages had 0 job(s) [purged]
[2024-07-03 23:29:56] 2024-07-04 03:29:43,519 | INFO     | job 6252932711 has completed (purged errors)
[2024-07-03 23:29:56] 2024-07-04 03:29:43,519 | INFO     | overall cleanup function is called
[2024-07-03 23:29:56] 2024-07-04 03:29:44,526 | INFO     | --- collectZombieJob: --- 10, [11475]
[2024-07-03 23:29:56] 2024-07-04 03:29:44,526 | INFO     | zombie collector waiting for pid 11475
[2024-07-03 23:29:56] 2024-07-04 03:29:44,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-07-03 23:29:56] 2024-07-04 03:29:45,531 | INFO     | collected zombie processes
[2024-07-03 23:29:56] 2024-07-04 03:29:45,531 | INFO     | will now attempt to kill all subprocesses of pid=11475
[2024-07-03 23:29:56] 2024-07-04 03:29:45,610 | INFO     | process IDs to be killed: [11475] (in reverse order)
[2024-07-03 23:29:56] 2024-07-04 03:29:45,654 | WARNING  | found no corresponding commands to process id(s)
[2024-07-03 23:29:56] 2024-07-04 03:29:45,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-07-03 23:29:56] 2024-07-04 03:29:45,661 | INFO     | did not find any defunct processes belonging to 11475
[2024-07-03 23:29:56] 2024-07-04 03:29:45,665 | INFO     | did not find any defunct processes belonging to 11475
[2024-07-03 23:29:56] 2024-07-04 03:29:45,665 | INFO     | ready for new job
[2024-07-03 23:29:56] 2024-07-04 03:29:45,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-07-03 23:29:56] 2024-07-04 03:29:45,667 | INFO     | *************************************
[2024-07-03 23:29:56] 2024-07-04 03:29:45,667 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-07-03 23:29:56] 2024-07-04 03:29:45,667 | INFO     | *************************************
[2024-07-03 23:29:56] 2024-07-04 03:29:45,667 | INFO     | 
[2024-07-03 23:29:56] 2024-07-04 03:29:45,671 | INFO     | architecture information:
[2024-07-03 23:29:56] 2024-07-04 03:29:45,671 | INFO     | executing command: cat /etc/os-release
[2024-07-03 23:29:56] 2024-07-04 03:29:45,685 | INFO     | cat /etc/os-release:
[2024-07-03 23:29:56] NAME="CentOS Linux"
[2024-07-03 23:29:56] VERSION="7 (Core)"
[2024-07-03 23:29:56] ID="centos"
[2024-07-03 23:29:56] ID_LIKE="rhel fedora"
[2024-07-03 23:29:56] VERSION_ID="7"
[2024-07-03 23:29:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-07-03 23:29:56] ANSI_COLOR="0;31"
[2024-07-03 23:29:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-07-03 23:29:56] HOME_URL="https://www.centos.org/"
[2024-07-03 23:29:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-07-03 23:29:56] 
[2024-07-03 23:29:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-07-03 23:29:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-07-03 23:29:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-07-03 23:29:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-07-03 23:29:56] 
[2024-07-03 23:29:56] 2024-07-04 03:29:45,685 | INFO     | *************************************
[2024-07-03 23:29:56] 2024-07-04 03:29:46,188 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-07-03 23:29:56] 2024-07-04 03:29:46,202 | INFO     | sufficient remaining disk space (104640544768 B)
[2024-07-03 23:29:56] 2024-07-04 03:29:46,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-07-03 23:29:56] 2024-07-04 03:29:46,202 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-07-03 23:29:56] 2024-07-04 03:29:46,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-07-03 23:29:56] 2024-07-04 03:29:46,403 | INFO     | all payload control threads have been joined
[2024-07-03 23:29:56] 2024-07-04 03:29:46,405 | INFO     | all data control threads have been joined
[2024-07-03 23:29:56] 2024-07-04 03:29:46,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-07-03 23:29:56] 2024-07-04 03:29:46,579 | INFO     | aborting loop
[2024-07-03 23:29:56] 2024-07-04 03:29:47,203 | INFO     | found 0 job(s) in 20 queues
[2024-07-03 23:29:56] 2024-07-04 03:29:47,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-07-03 23:29:56] 2024-07-04 03:29:47,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-07-03 23:29:56] 2024-07-04 03:29:47,208 | INFO     | [job] retrieve thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:47,276 | INFO     | [payload] execute_payloads thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:47,296 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-07-03 23:29:56] 2024-07-04 03:29:47,344 | INFO     | [payload] failed_post thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:47,408 | INFO     | [payload] control thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:47,410 | INFO     | [data] control thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:47,585 | INFO     | [job] job monitor thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:47,745 | INFO     | all job control threads have been joined
[2024-07-03 23:29:56] 2024-07-04 03:29:47,806 | INFO     | [data] copytool_in thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:48,167 | INFO     | [payload] validate_pre thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:48,479 | INFO     | [payload] run_realtimelog thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:48,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-07-03 23:29:56] 2024-07-04 03:29:48,542 | INFO     | [job] create_data_payload thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:48,622 | INFO     | [payload] validate_post thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:48,700 | INFO     | [job] validate thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:48,750 | INFO     | [job] control thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:49,297 | INFO     | [data] copytool_out thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:49,514 | INFO     | [job] queue monitor thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:50,209 | INFO     | [data] queue_monitor thread has finished
[2024-07-03 23:29:56] 2024-07-04 03:29:51,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327567607616)>', '<ExcThread(monitor, started 140326765319936)>']
[2024-07-03 23:29:56] 2024-07-04 03:29:52,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-07-03 23:29:56] 2024-07-04 03:29:52,229 | INFO     | [monitor] control thread has ended
[2024-07-03 23:29:56] 2024-07-04 03:29:56,401 | INFO     | all workflow threads have been joined
[2024-07-03 23:29:56] 2024-07-04 03:29:56,401 | INFO     | end of generic workflow (traces error code: 0)
[2024-07-03 23:29:56] 2024-07-04 03:29:56,401 | INFO     | traces error code: 0
[2024-07-03 23:29:56] 2024-07-04 03:29:56,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-07-03 23:29:56] 2024-07-04 03:29:56,486 [wrapper] ==== pilot stdout END ====
[2024-07-03 23:29:56] 2024-07-04 03:29:56,487 [wrapper] ==== wrapper stdout RESUME ====
[2024-07-03 23:29:56] 2024-07-04 03:29:56,488 [wrapper] pilotpid: 82799
[2024-07-03 23:29:56] 2024-07-04 03:29:56,489 [wrapper] Pilot exit status: 0
[2024-07-03 23:29:56] 2024-07-04 03:29:56,494 [wrapper] pandaids: 6252932711
[2024-07-03 23:29:56] 2024-07-04 03:29:56,527 [wrapper] cleanup supervisor_pilot 17842 82800
[2024-07-03 23:29:56] 2024-07-04 03:29:56,529 [wrapper] Test setup, not cleaning
[2024-07-03 23:29:56] 2024-07-04 03:29:56,530 [wrapper] ==== wrapper stdout END ====
[2024-07-03 23:29:56] 2024-07-04 03:29:56,532 [wrapper] ==== wrapper stderr END ====
[2024-07-03 23:29:56] 2024-07-04 03:29:56,534 [wrapper] apfmon messages muted
[2024-07-03 23:29:56]  *** Error codes and diagnostics ***
[2024-07-03 23:29:56]     "exeErrorCode": 0,
[2024-07-03 23:29:56]     "exeErrorDiag": "",
[2024-07-03 23:29:56]     "pilotErrorCode": 0,
[2024-07-03 23:29:56]     "pilotErrorDiag": "",
[2024-07-03 23:29:56]  *** Listing of results directory ***
[2024-07-03 23:29:56] total 477064
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas    469766 Jul  3 19:44 pilot3.tar.gz
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas      5654 Jul  3 20:04 queuedata.json
[2024-07-03 23:29:56] -rwx------ 1 boincer umatlas     32220 Jul  3 20:04 runpilot2-wrapper.sh
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas       100 Jul  3 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-07-03 23:29:56] -rwxr-xr-x 1 boincer umatlas      7986 Jul  3 20:08 run_atlas
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas       105 Jul  3 20:08 job.xml
[2024-07-03 23:29:56] -rw-r--r-- 2 boincer umatlas 307040574 Jul  3 20:08 EVNT.40175607._000004.pool.root.1
[2024-07-03 23:29:56] -rw-r--r-- 2 boincer umatlas     17537 Jul  3 20:08 start_atlas.sh
[2024-07-03 23:29:56] drwxrwx--x 2 boincer umatlas      4096 Jul  3 20:08 shared
[2024-07-03 23:29:56] -rw-r--r-- 2 boincer umatlas    482461 Jul  3 20:08 input.tar.gz
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas         0 Jul  3 20:08 boinc_lockfile
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas      2522 Jul  3 20:08 pandaJob.out
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas       467 Jul  3 20:08 setup.sh.local
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas   1033408 Jul  3 20:08 agis_schedconf.cvmfs.json
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas   1328502 Jul  3 20:08 cric_ddmendpoints.json
[2024-07-03 23:29:56] drwx------ 4 boincer umatlas      4096 Jul  3 20:08 pilot3
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas      6388 Jul  3 23:27 init_data.xml
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas        95 Jul  3 23:29 pilot_heartbeat.json
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas 175008396 Jul  3 23:29 HITS.40175609._000077.pool.root.1
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas       530 Jul  3 23:29 boinc_task_state.xml
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas      1072 Jul  3 23:29 memory_monitor_summary.json
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas         0 Jul  3 23:29 agis_ddmendpoints.agis.ALL.json
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas    361476 Jul  3 23:29 log.40175609._000077.job.log.tgz.1
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas      7731 Jul  3 23:29 heartbeat.json
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas        28 Jul  3 23:29 wrapper_checkpoint.txt
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas      4212 Jul  3 23:29 pilotlog.txt
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas      8192 Jul  3 23:29 boinc_mmap_file
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas   1092808 Jul  3 23:29 log.40175609._000077.job.log.1
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas       357 Jul  3 23:29 output.list
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas       620 Jul  3 23:29 runtime_log
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas   1474560 Jul  3 23:29 result.tar.gz
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas     11405 Jul  3 23:29 runtime_log.err
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas       649 Jul  3 23:29 0IGNDml8Oj5n7Olcko1bjSoqABFKDmABFKDmOtvXDmkJsKDmI2NaWn.diag
[2024-07-03 23:29:56] -rw-r--r-- 1 boincer umatlas     21780 Jul  3 23:29 stderr.txt
[2024-07-03 23:29:56] HITS file was successfully produced:
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas 175008396 Jul  3 23:29 shared/HITS.pool.root.1
[2024-07-03 23:29:56]  *** Contents of shared directory: ***
[2024-07-03 23:29:56] total 472696
[2024-07-03 23:29:56] -rw-r--r-- 2 boincer umatlas 307040574 Jul  3 20:08 ATLAS.root_0
[2024-07-03 23:29:56] -rw-r--r-- 2 boincer umatlas     17537 Jul  3 20:08 start_atlas.sh
[2024-07-03 23:29:56] -rw-r--r-- 2 boincer umatlas    482461 Jul  3 20:08 input.tar.gz
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas 175008396 Jul  3 23:29 HITS.pool.root.1
[2024-07-03 23:29:56] -rw------- 1 boincer umatlas   1474560 Jul  3 23:29 result.tar.gz
23:29:57 (73347): run_atlas exited; CPU time 46418.230968
23:29:57 (73347): called boinc_finish(0)

</stderr_txt>
]]>

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