Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:08:14 (69957): wrapper (7.7.26015): starting
20:08:14 (69957): wrapper: running run_atlas (--nthreads 8)
[2024-07-03 20:08:14] Arguments: --nthreads 8
[2024-07-03 20:08:14] Threads: 8
[2024-07-03 20:08:14] Checking for CVMFS
[2024-07-03 20:08:14] Probing /cvmfs/atlas.cern.ch... OK
[2024-07-03 20:08:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-07-03 20:08:14] Running cvmfs_config stat atlas.cern.ch
[2024-07-03 20:08:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-07-03 20:08:14] 2.11.2.0 63312 7415 128824 134589 0 197 11942637 18432000 6554 130560 0 18227369 98.332 75306403 53699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-07-03 20:08:14] CVMFS is ok
[2024-07-03 20:08:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-07-03 20:08:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-07-03 20:08:14] Further information can be found at the LHC@home message board.
[2024-07-03 20:08:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-07-03 20:08:14] Checking for apptainer binary...
[2024-07-03 20:08:14] Using apptainer found in PATH at /usr/bin/apptainer
[2024-07-03 20:08:14] Running /usr/bin/apptainer --version
[2024-07-03 20:08:14] apptainer version 1.3.2-1.el7
[2024-07-03 20:08:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-07-03 20:08:15] c-212-10.aglt2.org
[2024-07-03 20:08:15] apptainer works
[2024-07-03 20:08:15] Set ATHENA_PROC_NUMBER=8
[2024-07-03 20:08:15] Set ATHENA_CORE_NUMBER=8
[2024-07-03 20:08:15] Starting ATLAS job with PandaID=6252932713
[2024-07-03 20:08:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-07-03 23:26:03]  *** The last 200 lines of the pilot log: ***
[2024-07-03 23:26:03] 2024-07-04 03:25:39,380 | INFO     | preparing for final server update for job 6252932713 in state='finished'
[2024-07-03 23:26:03] 2024-07-04 03:25:39,380 | INFO     | this job has now completed (state=finished)
[2024-07-03 23:26:03] 2024-07-04 03:25:39,380 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-07-03 23:26:03] 2024-07-04 03:25:39,380 | INFO     | job 6252932713 has finished - writing final server update
[2024-07-03 23:26:03] 2024-07-04 03:25:39,381 | INFO     | total number of processed events: 400 (read)
[2024-07-03 23:26:03] 2024-07-04 03:25:39,385 | INFO     | executing command: lscpu
[2024-07-03 23:26:03] 2024-07-04 03:25:39,418 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-07-03 23:26:03] 2024-07-04 03:25:39,419 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-07-03 23:26:03] 2024-07-04 03:25:39,473 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-07-03 23:26:03] 2024-07-04 03:25:39,663 | INFO     | monitor loop #879: job 0:6252932713 is in state 'finished'
[2024-07-03 23:26:03] 2024-07-04 03:25:39,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-07-03 23:26:03] 2024-07-04 03:25:42,167 | INFO     | monitor loop #880: job 0:6252932713 is in state 'finished'
[2024-07-03 23:26:03] 2024-07-04 03:25:42,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-07-03 23:26:03] 2024-07-04 03:25:43,305 | INFO     | CPU arch script returned: x86-64-v3
[2024-07-03 23:26:03] 2024-07-04 03:25:43,305 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6252932713/memory_monitor_summary.json (trf name=prmon)
[2024-07-03 23:26:03] 2024-07-04 03:25:43,306 | INFO     | extracted standard info from prmon json
[2024-07-03 23:26:03] 2024-07-04 03:25:43,306 | INFO     | extracted standard memory fields from prmon json
[2024-07-03 23:26:03] 2024-07-04 03:25:43,306 | WARNING  | GPU info not found in prmon json
[2024-07-03 23:26:03] 2024-07-04 03:25:43,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-07-03 23:26:03] 2024-07-04 03:25:43,307 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-07-03 23:26:03] 2024-07-04 03:25:43,309 | INFO     | fitting pss+swap vs Time
[2024-07-03 23:26:03] 2024-07-04 03:25:43,309 | INFO     | model: linear, x: [1720051725.0, 1720051786.0, 1720051847.0, 1720051908.0, 1720051969.0, 1720052030.0, 1720052091.0, 1720052152.0, 1720052213.0, 1720052274.0, 1720
[2024-07-03 23:26:03] 2024-07-04 03:25:43,309 | INFO     | sum of square deviations: 2263967332.417523
[2024-07-03 23:26:03] 2024-07-04 03:25:43,310 | INFO     | sum of deviations: 297525499445.63416
[2024-07-03 23:26:03] 2024-07-04 03:25:43,310 | INFO     | mean x: 1720057611.5206184
[2024-07-03 23:26:03] 2024-07-04 03:25:43,310 | INFO     | mean y: 2156712.716494845
[2024-07-03 23:26:03] 2024-07-04 03:25:43,310 | INFO     | -- intersect: -226043949436.90933
[2024-07-03 23:26:03] 2024-07-04 03:25:43,310 | INFO     | intersect: -226043949436.90933
[2024-07-03 23:26:03] 2024-07-04 03:25:43,310 | INFO     | chi2: 12.77162267537271
[2024-07-03 23:26:03] 2024-07-04 03:25:43,310 | INFO     | model: linear, x: [1720051725.0, 1720051786.0, 1720051847.0, 1720051908.0, 1720051969.0, 1720052030.0, 1720052091.0, 1720052152.0, 1720052213.0, 1720052274.0, 1720
[2024-07-03 23:26:03] 2024-07-04 03:25:43,310 | INFO     | sum of square deviations: 2093388609.915345
[2024-07-03 23:26:03] 2024-07-04 03:25:43,311 | INFO     | sum of deviations: 287784155057.00024
[2024-07-03 23:26:03] 2024-07-04 03:25:43,311 | INFO     | mean x: 1720057459.021164
[2024-07-03 23:26:03] 2024-07-04 03:25:43,311 | INFO     | mean y: 2148002.0
[2024-07-03 23:26:03] 2024-07-04 03:25:43,311 | INFO     | -- intersect: -236459099637.02014
[2024-07-03 23:26:03] 2024-07-04 03:25:43,311 | INFO     | intersect: -236459099637.02014
[2024-07-03 23:26:03] 2024-07-04 03:25:43,311 | INFO     | chi2: 12.562832151017329
[2024-07-03 23:26:03] 2024-07-04 03:25:43,311 | INFO     | current chi2=12.562832151017329 (change=1.6348002885959663 %)
[2024-07-03 23:26:03] 2024-07-04 03:25:43,311 | INFO     | right removable region: 188
[2024-07-03 23:26:03] 2024-07-04 03:25:43,311 | INFO     | model: linear, x: [1720052030.0, 1720052091.0, 1720052152.0, 1720052213.0, 1720052274.0, 1720052335.0, 1720052396.0, 1720052457.0, 1720052518.0, 1720052579.0, 1720
[2024-07-03 23:26:03] 2024-07-04 03:25:43,311 | INFO     | sum of square deviations: 2093386169.915345
[2024-07-03 23:26:03] 2024-07-04 03:25:43,312 | INFO     | sum of deviations: 247224106611.48694
[2024-07-03 23:26:03] 2024-07-04 03:25:43,312 | INFO     | mean x: 1720057764.021164
[2024-07-03 23:26:03] 2024-07-04 03:25:43,312 | INFO     | mean y: 2201574.8783068783
[2024-07-03 23:26:03] 2024-07-04 03:25:43,312 | INFO     | -- intersect: -203132676328.45688
[2024-07-03 23:26:03] 2024-07-04 03:25:43,312 | INFO     | intersect: -203132676328.45688
[2024-07-03 23:26:03] 2024-07-04 03:25:43,312 | INFO     | chi2: 9.856460401642158
[2024-07-03 23:26:03] 2024-07-04 03:25:43,312 | INFO     | current chi2=9.856460401642158 (change=22.82530848137102 %)
[2024-07-03 23:26:03] 2024-07-04 03:25:43,312 | INFO     | left removable region: 10
[2024-07-03 23:26:03] 2024-07-04 03:25:43,312 | INFO     | model: linear, x: [1720052335.0, 1720052396.0, 1720052457.0, 1720052518.0, 1720052579.0, 1720052640.0, 1720052701.0, 1720052762.0, 1720052823.0, 1720052884.0, 1720
[2024-07-03 23:26:03] 2024-07-04 03:25:43,312 | INFO     | sum of square deviations: 1748726928.4101098
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | sum of deviations: 199095368830.80902
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | mean x: 1720057733.522472
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | mean y: 2230798.797752809
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | -- intersect: -195829104158.28
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | intersect: -195829104158.28
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | chi2: 8.328138231295993
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | -- intersect: -195829104158.28
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | current memory leak: 113.85 B/s (using 178 data points, chi2=8.33)
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | ..............................
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | . Timing measurements:
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | . get job = 0 s
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | . initial setup = 1 s
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | . payload setup = 3 s
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | . stage-in = 0 s
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | . payload execution = 11808 s
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | . stage-out = 1 s
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | . log creation = 0 s
[2024-07-03 23:26:03] 2024-07-04 03:25:43,313 | INFO     | ..............................
[2024-07-03 23:26:03] 2024-07-04 03:25:43,353 | INFO     | 
[2024-07-03 23:26:03] 2024-07-04 03:25:43,354 | INFO     | job summary report
[2024-07-03 23:26:03] 2024-07-04 03:25:43,354 | INFO     | --------------------------------------------------
[2024-07-03 23:26:03] 2024-07-04 03:25:43,354 | INFO     | PanDA job id: 6252932713
[2024-07-03 23:26:03] 2024-07-04 03:25:43,354 | INFO     | task id: 40175609
[2024-07-03 23:26:03] 2024-07-04 03:25:43,354 | INFO     | errors: (none)
[2024-07-03 23:26:03] 2024-07-04 03:25:43,354 | INFO     | status: LOG_TRANSFER = DONE 
[2024-07-03 23:26:03] 2024-07-04 03:25:43,354 | INFO     | pilot state: finished 
[2024-07-03 23:26:03] 2024-07-04 03:25:43,354 | INFO     | transexitcode: 0
[2024-07-03 23:26:03] 2024-07-04 03:25:43,354 | INFO     | exeerrorcode: 0
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | exeerrordiag: 
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | exitcode: 0
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | exitmsg: OK
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | cpuconsumptiontime: 46883 s
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | nevents: 400
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | neventsw: 0
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | pid: 733
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | pgrp: 733
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | corecount: 8
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | event service: False
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | sizes: {0: 2404161, 1: 2404360, 4: 2404566, 11: 2404594, 11816: 2433873, 11817: 2433872, 11819: 2443016, 11820: 2443072, 11827: 2443242}
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | --------------------------------------------------
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | 
[2024-07-03 23:26:03] 2024-07-04 03:25:43,355 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-07-03 23:26:03] 2024-07-04 03:25:43,374 | INFO     | queue jobs had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,374 | INFO     | queue payloads had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,374 | INFO     | queue data_in had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,374 | INFO     | queue data_out had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | queue completed_jobids has 1 job(s)
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | queue messages had 0 job(s) [purged]
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | job 6252932713 has completed (purged errors)
[2024-07-03 23:26:03] 2024-07-04 03:25:43,375 | INFO     | overall cleanup function is called
[2024-07-03 23:26:03] 2024-07-04 03:25:44,383 | INFO     | --- collectZombieJob: --- 10, [733]
[2024-07-03 23:26:03] 2024-07-04 03:25:44,383 | INFO     | zombie collector waiting for pid 733
[2024-07-03 23:26:03] 2024-07-04 03:25:44,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-07-03 23:26:03] 2024-07-04 03:25:45,388 | INFO     | collected zombie processes
[2024-07-03 23:26:03] 2024-07-04 03:25:45,388 | INFO     | will now attempt to kill all subprocesses of pid=733
[2024-07-03 23:26:03] 2024-07-04 03:25:45,488 | INFO     | process IDs to be killed: [733] (in reverse order)
[2024-07-03 23:26:03] 2024-07-04 03:25:45,567 | WARNING  | found no corresponding commands to process id(s)
[2024-07-03 23:26:03] 2024-07-04 03:25:45,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-07-03 23:26:03] 2024-07-04 03:25:45,575 | INFO     | did not find any defunct processes belonging to 733
[2024-07-03 23:26:03] 2024-07-04 03:25:45,583 | INFO     | did not find any defunct processes belonging to 733
[2024-07-03 23:26:03] 2024-07-04 03:25:45,583 | INFO     | ready for new job
[2024-07-03 23:26:03] 2024-07-04 03:25:45,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-07-03 23:26:03] 2024-07-04 03:25:45,585 | INFO     | *************************************
[2024-07-03 23:26:03] 2024-07-04 03:25:45,585 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-07-03 23:26:03] 2024-07-04 03:25:45,585 | INFO     | *************************************
[2024-07-03 23:26:03] 2024-07-04 03:25:45,585 | INFO     | 
[2024-07-03 23:26:03] 2024-07-04 03:25:45,589 | INFO     | architecture information:
[2024-07-03 23:26:03] 2024-07-04 03:25:45,589 | INFO     | executing command: cat /etc/os-release
[2024-07-03 23:26:03] 2024-07-04 03:25:45,603 | INFO     | cat /etc/os-release:
[2024-07-03 23:26:03] NAME="CentOS Linux"
[2024-07-03 23:26:03] VERSION="7 (Core)"
[2024-07-03 23:26:03] ID="centos"
[2024-07-03 23:26:03] ID_LIKE="rhel fedora"
[2024-07-03 23:26:03] VERSION_ID="7"
[2024-07-03 23:26:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-07-03 23:26:03] ANSI_COLOR="0;31"
[2024-07-03 23:26:03] CPE_NAME="cpe:/o:centos:centos:7"
[2024-07-03 23:26:03] HOME_URL="https://www.centos.org/"
[2024-07-03 23:26:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-07-03 23:26:03] 
[2024-07-03 23:26:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-07-03 23:26:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-07-03 23:26:03] REDHAT_SUPPORT_PRODUCT="centos"
[2024-07-03 23:26:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-07-03 23:26:03] 
[2024-07-03 23:26:03] 2024-07-04 03:25:45,603 | INFO     | *************************************
[2024-07-03 23:26:03] 2024-07-04 03:25:46,106 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-07-03 23:26:03] 2024-07-04 03:25:46,122 | INFO     | sufficient remaining disk space (103388545024 B)
[2024-07-03 23:26:03] 2024-07-04 03:25:46,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-07-03 23:26:03] 2024-07-04 03:25:46,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-07-03 23:26:03] 2024-07-04 03:25:46,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-07-03 23:26:03] 2024-07-04 03:25:46,123 | INFO     | aborting loop
[2024-07-03 23:26:03] 2024-07-04 03:25:46,253 | INFO     | all payload control threads have been joined
[2024-07-03 23:26:03] 2024-07-04 03:25:46,295 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-07-03 23:26:03] 2024-07-04 03:25:46,554 | INFO     | all data control threads have been joined
[2024-07-03 23:26:03] 2024-07-04 03:25:46,922 | INFO     | found 0 job(s) in 20 queues
[2024-07-03 23:26:03] 2024-07-04 03:25:46,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-07-03 23:26:03] 2024-07-04 03:25:46,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-07-03 23:26:03] 2024-07-04 03:25:46,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-07-03 23:26:03] 2024-07-04 03:25:47,128 | INFO     | [job] job monitor thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:47,128 | INFO     | [job] retrieve thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:47,259 | INFO     | [payload] control thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:47,297 | INFO     | all job control threads have been joined
[2024-07-03 23:26:03] 2024-07-04 03:25:47,559 | INFO     | [data] control thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:47,560 | INFO     | [payload] validate_post thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:47,652 | INFO     | [payload] execute_payloads thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:47,853 | INFO     | [payload] failed_post thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:47,876 | INFO     | [job] validate thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:47,913 | INFO     | [job] create_data_payload thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:48,288 | INFO     | [data] copytool_in thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:48,300 | INFO     | [data] copytool_out thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:48,302 | INFO     | [job] control thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:48,356 | INFO     | [payload] validate_pre thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:48,359 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-07-03 23:26:03] 2024-07-04 03:25:49,365 | INFO     | [job] queue monitor thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:50,982 | INFO     | [data] queue_monitor thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:57,016 | INFO     | job.realtimelogging is not enabled
[2024-07-03 23:26:03] 2024-07-04 03:25:58,021 | INFO     | [payload] run_realtimelog thread has finished
[2024-07-03 23:26:03] 2024-07-04 03:25:58,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861992666944)>', '<ExcThread(monitor, started 139861549889280)>']
[2024-07-03 23:26:03] 2024-07-04 03:25:58,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-07-03 23:26:03] 2024-07-04 03:25:58,983 | INFO     | [monitor] control thread has ended
[2024-07-03 23:26:03] 2024-07-04 03:26:03,306 | INFO     | all workflow threads have been joined
[2024-07-03 23:26:03] 2024-07-04 03:26:03,306 | INFO     | end of generic workflow (traces error code: 0)
[2024-07-03 23:26:03] 2024-07-04 03:26:03,307 | INFO     | traces error code: 0
[2024-07-03 23:26:03] 2024-07-04 03:26:03,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-07-03 23:26:03] 2024-07-04 03:26:03,376 [wrapper] ==== pilot stdout END ====
[2024-07-03 23:26:03] 2024-07-04 03:26:03,379 [wrapper] ==== wrapper stdout RESUME ====
[2024-07-03 23:26:03] 2024-07-04 03:26:03,382 [wrapper] pilotpid: 74553
[2024-07-03 23:26:03] 2024-07-04 03:26:03,385 [wrapper] Pilot exit status: 0
[2024-07-03 23:26:03] 2024-07-04 03:26:03,392 [wrapper] pandaids: 6252932713
[2024-07-03 23:26:03] 2024-07-04 03:26:03,447 [wrapper] cleanup supervisor_pilot 17657 74554
[2024-07-03 23:26:03] 2024-07-04 03:26:03,450 [wrapper] Test setup, not cleaning
[2024-07-03 23:26:03] 2024-07-04 03:26:03,452 [wrapper] ==== wrapper stdout END ====
[2024-07-03 23:26:03] 2024-07-04 03:26:03,454 [wrapper] ==== wrapper stderr END ====
[2024-07-03 23:26:03] 2024-07-04 03:26:03,457 [wrapper] apfmon messages muted
[2024-07-03 23:26:03]  *** Error codes and diagnostics ***
[2024-07-03 23:26:03]     "exeErrorCode": 0,
[2024-07-03 23:26:03]     "exeErrorDiag": "",
[2024-07-03 23:26:03]     "pilotErrorCode": 0,
[2024-07-03 23:26:03]     "pilotErrorDiag": "",
[2024-07-03 23:26:03]  *** Listing of results directory ***
[2024-07-03 23:26:03] total 480504
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas    469766 Jul  3 19:44 pilot3.tar.gz
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas      5654 Jul  3 20:04 queuedata.json
[2024-07-03 23:26:03] -rwx------ 1 boincer umatlas     32220 Jul  3 20:04 runpilot2-wrapper.sh
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas       100 Jul  3 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-07-03 23:26:03] -rwxr-xr-x 1 boincer umatlas      7986 Jul  3 20:08 run_atlas
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas       105 Jul  3 20:08 job.xml
[2024-07-03 23:26:03] -rw-r--r-- 2 boincer umatlas 307040574 Jul  3 20:08 EVNT.40175607._000004.pool.root.1
[2024-07-03 23:26:03] -rw-r--r-- 2 boincer umatlas     17537 Jul  3 20:08 start_atlas.sh
[2024-07-03 23:26:03] drwxrwx--x 2 boincer umatlas      4096 Jul  3 20:08 shared
[2024-07-03 23:26:03] -rw-r--r-- 2 boincer umatlas    482466 Jul  3 20:08 input.tar.gz
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas         0 Jul  3 20:08 boinc_lockfile
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas      2523 Jul  3 20:08 pandaJob.out
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas       467 Jul  3 20:08 setup.sh.local
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas   1033408 Jul  3 20:08 agis_schedconf.cvmfs.json
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas   1328502 Jul  3 20:08 cric_ddmendpoints.json
[2024-07-03 23:26:03] drwx------ 4 boincer umatlas      4096 Jul  3 20:08 pilot3
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas      6388 Jul  3 23:19 init_data.xml
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas        95 Jul  3 23:25 pilot_heartbeat.json
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas 178573950 Jul  3 23:25 HITS.40175609._000079.pool.root.1
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas       531 Jul  3 23:25 boinc_task_state.xml
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas      1072 Jul  3 23:25 memory_monitor_summary.json
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas         0 Jul  3 23:25 agis_ddmendpoints.agis.ALL.json
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas    362058 Jul  3 23:25 log.40175609._000079.job.log.tgz.1
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas      7730 Jul  3 23:25 heartbeat.json
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas      8192 Jul  3 23:25 boinc_mmap_file
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas        28 Jul  3 23:25 wrapper_checkpoint.txt
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas      4284 Jul  3 23:26 pilotlog.txt
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas   1067950 Jul  3 23:26 log.40175609._000079.job.log.1
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas       357 Jul  3 23:26 output.list
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas       620 Jul  3 23:26 runtime_log
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas   1454080 Jul  3 23:26 result.tar.gz
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas     11405 Jul  3 23:26 runtime_log.err
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas       649 Jul  3 23:26 BTKNDml8Oj5n7Olcko1bjSoqABFKDmABFKDmOtvXDmmJsKDmxguTOn.diag
[2024-07-03 23:26:03] -rw-r--r-- 1 boincer umatlas     21785 Jul  3 23:26 stderr.txt
[2024-07-03 23:26:03] HITS file was successfully produced:
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas 178573950 Jul  3 23:25 shared/HITS.pool.root.1
[2024-07-03 23:26:03]  *** Contents of shared directory: ***
[2024-07-03 23:26:03] total 476160
[2024-07-03 23:26:03] -rw-r--r-- 2 boincer umatlas 307040574 Jul  3 20:08 ATLAS.root_0
[2024-07-03 23:26:03] -rw-r--r-- 2 boincer umatlas     17537 Jul  3 20:08 start_atlas.sh
[2024-07-03 23:26:03] -rw-r--r-- 2 boincer umatlas    482466 Jul  3 20:08 input.tar.gz
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas 178573950 Jul  3 23:25 HITS.pool.root.1
[2024-07-03 23:26:03] -rw------- 1 boincer umatlas   1454080 Jul  3 23:26 result.tar.gz
23:26:04 (69957): run_atlas exited; CPU time 46271.490305
23:26:04 (69957): called boinc_finish(0)

</stderr_txt>
]]>

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