Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:07:58 (63282): wrapper (7.7.26015): starting
20:07:58 (63282): wrapper: running run_atlas (--nthreads 8)
[2024-07-03 20:07:58] Arguments: --nthreads 8
[2024-07-03 20:07:58] Threads: 8
[2024-07-03 20:07:58] Checking for CVMFS
[2024-07-03 20:07:58] Probing /cvmfs/atlas.cern.ch... OK
[2024-07-03 20:07:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-07-03 20:07:58] Running cvmfs_config stat atlas.cern.ch
[2024-07-03 20:07:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-07-03 20:07:58] 2.11.2.0 63312 7415 125972 134589 1 197 11831277 18432000 6463 130560 0 18209068 98.339 75254743 53679 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-07-03 20:07:58] CVMFS is ok
[2024-07-03 20:07:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-07-03 20:07:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-07-03 20:07:58] Further information can be found at the LHC@home message board.
[2024-07-03 20:07:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-07-03 20:07:58] Checking for apptainer binary...
[2024-07-03 20:07:58] Using apptainer found in PATH at /usr/bin/apptainer
[2024-07-03 20:07:58] Running /usr/bin/apptainer --version
[2024-07-03 20:07:58] apptainer version 1.3.2-1.el7
[2024-07-03 20:07:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-07-03 20:08:00] c-212-10.aglt2.org
[2024-07-03 20:08:00] apptainer works
[2024-07-03 20:08:00] Set ATHENA_PROC_NUMBER=8
[2024-07-03 20:08:00] Set ATHENA_CORE_NUMBER=8
[2024-07-03 20:08:00] Starting ATLAS job with PandaID=6252932712
[2024-07-03 20:08:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-07-03 23:28:06]  *** The last 200 lines of the pilot log: ***
[2024-07-03 23:28:06] 2024-07-04 03:27:45,820 | INFO     | preparing for final server update for job 6252932712 in state='finished'
[2024-07-03 23:28:06] 2024-07-04 03:27:45,821 | INFO     | this job has now completed (state=finished)
[2024-07-03 23:28:06] 2024-07-04 03:27:45,821 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-07-03 23:28:06] 2024-07-04 03:27:45,821 | INFO     | job 6252932712 has finished - writing final server update
[2024-07-03 23:28:06] 2024-07-04 03:27:45,821 | INFO     | total number of processed events: 400 (read)
[2024-07-03 23:28:06] 2024-07-04 03:27:45,824 | INFO     | executing command: lscpu
[2024-07-03 23:28:06] 2024-07-04 03:27:45,867 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-07-03 23:28:06] 2024-07-04 03:27:45,867 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-07-03 23:28:06] 2024-07-04 03:27:45,927 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-07-03 23:28:06] 2024-07-04 03:27:47,424 | INFO     | monitor loop #892: job 0:6252932712 is in state 'finished'
[2024-07-03 23:28:06] 2024-07-04 03:27:47,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-07-03 23:28:06] 2024-07-04 03:27:49,927 | INFO     | monitor loop #893: job 0:6252932712 is in state 'finished'
[2024-07-03 23:28:06] 2024-07-04 03:27:49,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-07-03 23:28:06] 2024-07-04 03:27:50,499 | INFO     | CPU arch script returned: x86-64-v3
[2024-07-03 23:28:06] 2024-07-04 03:27:50,499 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6252932712/memory_monitor_summary.json (trf name=prmon)
[2024-07-03 23:28:06] 2024-07-04 03:27:50,500 | INFO     | extracted standard info from prmon json
[2024-07-03 23:28:06] 2024-07-04 03:27:50,500 | INFO     | extracted standard memory fields from prmon json
[2024-07-03 23:28:06] 2024-07-04 03:27:50,500 | WARNING  | GPU info not found in prmon json
[2024-07-03 23:28:06] 2024-07-04 03:27:50,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-07-03 23:28:06] 2024-07-04 03:27:50,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-07-03 23:28:06] 2024-07-04 03:27:50,504 | INFO     | fitting pss+swap vs Time
[2024-07-03 23:28:06] 2024-07-04 03:27:50,504 | INFO     | model: linear, x: [1720051712.0, 1720051773.0, 1720051834.0, 1720051895.0, 1720051956.0, 1720052017.0, 1720052078.0, 1720052139.0, 1720052200.0, 1720052261.0, 1720
[2024-07-03 23:28:06] 2024-07-04 03:27:50,504 | INFO     | sum of square deviations: 2334709492.872463
[2024-07-03 23:28:06] 2024-07-04 03:27:50,505 | INFO     | sum of deviations: 304788194634.2806
[2024-07-03 23:28:06] 2024-07-04 03:27:50,505 | INFO     | mean x: 1720057659.5255103
[2024-07-03 23:28:06] 2024-07-04 03:27:50,505 | INFO     | mean y: 2156496.4438775512
[2024-07-03 23:28:06] 2024-07-04 03:27:50,505 | INFO     | -- intersect: -224545381565.19385
[2024-07-03 23:28:06] 2024-07-04 03:27:50,505 | INFO     | intersect: -224545381565.19385
[2024-07-03 23:28:06] 2024-07-04 03:27:50,506 | INFO     | chi2: 12.923504816527585
[2024-07-03 23:28:06] 2024-07-04 03:27:50,506 | INFO     | model: linear, x: [1720051712.0, 1720051773.0, 1720051834.0, 1720051895.0, 1720051956.0, 1720052017.0, 1720052078.0, 1720052139.0, 1720052200.0, 1720052261.0, 1720
[2024-07-03 23:28:06] 2024-07-04 03:27:50,506 | INFO     | sum of square deviations: 2160549612.8691034
[2024-07-03 23:28:06] 2024-07-04 03:27:50,507 | INFO     | sum of deviations: 294769777021.5601
[2024-07-03 23:28:06] 2024-07-04 03:27:50,507 | INFO     | mean x: 1720057507.0261781
[2024-07-03 23:28:06] 2024-07-04 03:27:50,507 | INFO     | mean y: 2147722.2879581153
[2024-07-03 23:28:06] 2024-07-04 03:27:50,507 | INFO     | -- intersect: -234670069379.48376
[2024-07-03 23:28:06] 2024-07-04 03:27:50,507 | INFO     | intersect: -234670069379.48376
[2024-07-03 23:28:06] 2024-07-04 03:27:50,507 | INFO     | chi2: 12.71914860991213
[2024-07-03 23:28:06] 2024-07-04 03:27:50,507 | INFO     | current chi2=12.71914860991213 (change=1.5812754319873632 %)
[2024-07-03 23:28:06] 2024-07-04 03:27:50,508 | INFO     | right removable region: 190
[2024-07-03 23:28:06] 2024-07-04 03:27:50,508 | INFO     | model: linear, x: [1720052017.0, 1720052078.0, 1720052139.0, 1720052200.0, 1720052261.0, 1720052322.0, 1720052383.0, 1720052444.0, 1720052505.0, 1720052566.0, 1720
[2024-07-03 23:28:06] 2024-07-04 03:27:50,508 | INFO     | sum of square deviations: 2160546562.8691034
[2024-07-03 23:28:06] 2024-07-04 03:27:50,509 | INFO     | sum of deviations: 254028759407.9162
[2024-07-03 23:28:06] 2024-07-04 03:27:50,509 | INFO     | mean x: 1720057812.0261781
[2024-07-03 23:28:06] 2024-07-04 03:27:50,509 | INFO     | mean y: 2200836.8167539267
[2024-07-03 23:28:06] 2024-07-04 03:27:50,509 | INFO     | -- intersect: -202235584549.6105
[2024-07-03 23:28:06] 2024-07-04 03:27:50,509 | INFO     | intersect: -202235584549.6105
[2024-07-03 23:28:06] 2024-07-04 03:27:50,509 | INFO     | chi2: 10.015497637806927
[2024-07-03 23:28:06] 2024-07-04 03:27:50,509 | INFO     | current chi2=10.015497637806927 (change=22.501691452938303 %)
[2024-07-03 23:28:06] 2024-07-04 03:27:50,509 | INFO     | left removable region: 10
[2024-07-03 23:28:06] 2024-07-04 03:27:50,509 | INFO     | model: linear, x: [1720052322.0, 1720052383.0, 1720052444.0, 1720052505.0, 1720052566.0, 1720052627.0, 1720052688.0, 1720052749.0, 1720052810.0, 1720052871.0, 1720
[2024-07-03 23:28:06] 2024-07-04 03:27:50,510 | INFO     | sum of square deviations: 1808335612.861113
[2024-07-03 23:28:06] 2024-07-04 03:27:50,510 | INFO     | sum of deviations: 205203002442.7221
[2024-07-03 23:28:06] 2024-07-04 03:27:50,510 | INFO     | mean x: 1720057781.5277777
[2024-07-03 23:28:06] 2024-07-04 03:27:50,510 | INFO     | mean y: 2229474.2555555557
[2024-07-03 23:28:06] 2024-07-04 03:27:50,510 | INFO     | -- intersect: -195183342625.39453
[2024-07-03 23:28:06] 2024-07-04 03:27:50,511 | INFO     | intersect: -195183342625.39453
[2024-07-03 23:28:06] 2024-07-04 03:27:50,511 | INFO     | chi2: 8.498636542484286
[2024-07-03 23:28:06] 2024-07-04 03:27:50,511 | INFO     | -- intersect: -195183342625.39453
[2024-07-03 23:28:06] 2024-07-04 03:27:50,511 | INFO     | current memory leak: 113.48 B/s (using 180 data points, chi2=8.50)
[2024-07-03 23:28:06] 2024-07-04 03:27:50,511 | INFO     | ..............................
[2024-07-03 23:28:06] 2024-07-04 03:27:50,511 | INFO     | . Timing measurements:
[2024-07-03 23:28:06] 2024-07-04 03:27:50,512 | INFO     | . get job = 0 s
[2024-07-03 23:28:06] 2024-07-04 03:27:50,512 | INFO     | . initial setup = 2 s
[2024-07-03 23:28:06] 2024-07-04 03:27:50,512 | INFO     | . payload setup = 4 s
[2024-07-03 23:28:06] 2024-07-04 03:27:50,512 | INFO     | . stage-in = 0 s
[2024-07-03 23:28:06] 2024-07-04 03:27:50,512 | INFO     | . payload execution = 11948 s
[2024-07-03 23:28:06] 2024-07-04 03:27:50,512 | INFO     | . stage-out = 1 s
[2024-07-03 23:28:06] 2024-07-04 03:27:50,512 | INFO     | . log creation = 0 s
[2024-07-03 23:28:06] 2024-07-04 03:27:50,512 | INFO     | ..............................
[2024-07-03 23:28:06] 2024-07-04 03:27:50,585 | INFO     | 
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | job summary report
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | --------------------------------------------------
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | PanDA job id: 6252932712
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | task id: 40175609
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | errors: (none)
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | status: LOG_TRANSFER = DONE 
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | pilot state: finished 
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | transexitcode: 0
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | exeerrorcode: 0
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | exeerrordiag: 
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | exitcode: 0
[2024-07-03 23:28:06] 2024-07-04 03:27:50,586 | INFO     | exitmsg: OK
[2024-07-03 23:28:06] 2024-07-04 03:27:50,587 | INFO     | cpuconsumptiontime: 46070 s
[2024-07-03 23:28:06] 2024-07-04 03:27:50,587 | INFO     | nevents: 400
[2024-07-03 23:28:06] 2024-07-04 03:27:50,587 | INFO     | neventsw: 0
[2024-07-03 23:28:06] 2024-07-04 03:27:50,587 | INFO     | pid: 84147
[2024-07-03 23:28:06] 2024-07-04 03:27:50,587 | INFO     | pgrp: 84147
[2024-07-03 23:28:06] 2024-07-04 03:27:50,587 | INFO     | corecount: 8
[2024-07-03 23:28:06] 2024-07-04 03:27:50,587 | INFO     | event service: False
[2024-07-03 23:28:06] 2024-07-04 03:27:50,587 | INFO     | sizes: {0: 2404330, 3: 2404536, 11: 2404564, 11956: 2434092, 11957: 2434091, 11960: 2443107, 11963: 2443291, 11968: 2443461}
[2024-07-03 23:28:06] 2024-07-04 03:27:50,587 | INFO     | --------------------------------------------------
[2024-07-03 23:28:06] 2024-07-04 03:27:50,587 | INFO     | 
[2024-07-03 23:28:06] 2024-07-04 03:27:50,587 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-07-03 23:28:06] 2024-07-04 03:27:50,601 | INFO     | queue jobs had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,601 | INFO     | queue payloads had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,601 | INFO     | queue data_in had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue data_out had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue completed_jobids has 1 job(s)
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,602 | INFO     | queue messages had 0 job(s) [purged]
[2024-07-03 23:28:06] 2024-07-04 03:27:50,603 | INFO     | job 6252932712 has completed (purged errors)
[2024-07-03 23:28:06] 2024-07-04 03:27:50,603 | INFO     | overall cleanup function is called
[2024-07-03 23:28:06] 2024-07-04 03:27:51,610 | INFO     | --- collectZombieJob: --- 10, [84147]
[2024-07-03 23:28:06] 2024-07-04 03:27:51,610 | INFO     | zombie collector waiting for pid 84147
[2024-07-03 23:28:06] 2024-07-04 03:27:51,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-07-03 23:28:06] 2024-07-04 03:27:52,610 | INFO     | collected zombie processes
[2024-07-03 23:28:06] 2024-07-04 03:27:52,610 | INFO     | will now attempt to kill all subprocesses of pid=84147
[2024-07-03 23:28:06] 2024-07-04 03:27:52,702 | INFO     | process IDs to be killed: [84147] (in reverse order)
[2024-07-03 23:28:06] 2024-07-04 03:27:52,775 | WARNING  | found no corresponding commands to process id(s)
[2024-07-03 23:28:06] 2024-07-04 03:27:52,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-07-03 23:28:06] 2024-07-04 03:27:52,781 | INFO     | did not find any defunct processes belonging to 84147
[2024-07-03 23:28:06] 2024-07-04 03:27:52,784 | INFO     | did not find any defunct processes belonging to 84147
[2024-07-03 23:28:06] 2024-07-04 03:27:52,785 | INFO     | ready for new job
[2024-07-03 23:28:06] 2024-07-04 03:27:52,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-07-03 23:28:06] 2024-07-04 03:27:52,786 | INFO     | *************************************
[2024-07-03 23:28:06] 2024-07-04 03:27:52,786 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-07-03 23:28:06] 2024-07-04 03:27:52,786 | INFO     | *************************************
[2024-07-03 23:28:06] 2024-07-04 03:27:52,786 | INFO     | 
[2024-07-03 23:28:06] 2024-07-04 03:27:52,789 | INFO     | architecture information:
[2024-07-03 23:28:06] 2024-07-04 03:27:52,789 | INFO     | executing command: cat /etc/os-release
[2024-07-03 23:28:06] 2024-07-04 03:27:52,818 | INFO     | cat /etc/os-release:
[2024-07-03 23:28:06] NAME="CentOS Linux"
[2024-07-03 23:28:06] VERSION="7 (Core)"
[2024-07-03 23:28:06] ID="centos"
[2024-07-03 23:28:06] ID_LIKE="rhel fedora"
[2024-07-03 23:28:06] VERSION_ID="7"
[2024-07-03 23:28:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-07-03 23:28:06] ANSI_COLOR="0;31"
[2024-07-03 23:28:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-07-03 23:28:06] HOME_URL="https://www.centos.org/"
[2024-07-03 23:28:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-07-03 23:28:06] 
[2024-07-03 23:28:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-07-03 23:28:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-07-03 23:28:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-07-03 23:28:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-07-03 23:28:06] 
[2024-07-03 23:28:06] 2024-07-04 03:27:52,818 | INFO     | *************************************
[2024-07-03 23:28:06] 2024-07-04 03:27:53,321 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-07-03 23:28:06] 2024-07-04 03:27:53,350 | INFO     | sufficient remaining disk space (103695777792 B)
[2024-07-03 23:28:06] 2024-07-04 03:27:53,350 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-07-03 23:28:06] 2024-07-04 03:27:53,350 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-07-03 23:28:06] 2024-07-04 03:27:53,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-07-03 23:28:06] 2024-07-04 03:27:53,350 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-07-03 23:28:06] 2024-07-04 03:27:53,351 | INFO     | found 0 job(s) in 20 queues
[2024-07-03 23:28:06] 2024-07-04 03:27:53,351 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-07-03 23:28:06] 2024-07-04 03:27:53,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-07-03 23:28:06] 2024-07-04 03:27:53,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-07-03 23:28:06] 2024-07-04 03:27:53,436 | INFO     | aborting loop
[2024-07-03 23:28:06] 2024-07-04 03:27:53,475 | INFO     | all data control threads have been joined
[2024-07-03 23:28:06] 2024-07-04 03:27:53,590 | INFO     | all payload control threads have been joined
[2024-07-03 23:28:06] 2024-07-04 03:27:54,355 | INFO     | [job] retrieve thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:54,442 | INFO     | [job] job monitor thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:54,480 | INFO     | [data] control thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:54,589 | INFO     | [payload] validate_pre thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:54,595 | INFO     | [payload] control thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:54,795 | INFO     | all job control threads have been joined
[2024-07-03 23:28:06] 2024-07-04 03:27:54,891 | INFO     | [payload] run_realtimelog thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:54,920 | INFO     | [payload] failed_post thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:54,927 | INFO     | [payload] validate_post thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:55,010 | INFO     | [data] copytool_in thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:55,099 | INFO     | [payload] execute_payloads thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:55,356 | INFO     | [data] copytool_out thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:55,564 | INFO     | [job] validate thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:55,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-07-03 23:28:06] 2024-07-04 03:27:55,771 | INFO     | [job] create_data_payload thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:55,800 | INFO     | [job] control thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:27:56,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-07-03 23:28:06] 2024-07-04 03:27:56,606 | INFO     | [job] queue monitor thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:28:00,193 | INFO     | [data] queue_monitor thread has finished
[2024-07-03 23:28:06] 2024-07-04 03:28:00,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324438193984)>', '<ExcThread(monitor, started 140323611203328)>']
[2024-07-03 23:28:06] 2024-07-04 03:28:01,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-07-03 23:28:06] 2024-07-04 03:28:01,389 | INFO     | [monitor] control thread has ended
[2024-07-03 23:28:06] 2024-07-04 03:28:05,788 | INFO     | all workflow threads have been joined
[2024-07-03 23:28:06] 2024-07-04 03:28:05,788 | INFO     | end of generic workflow (traces error code: 0)
[2024-07-03 23:28:06] 2024-07-04 03:28:05,788 | INFO     | traces error code: 0
[2024-07-03 23:28:06] 2024-07-04 03:28:05,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-07-03 23:28:06] 2024-07-04 03:28:05,846 [wrapper] ==== pilot stdout END ====
[2024-07-03 23:28:06] 2024-07-04 03:28:05,848 [wrapper] ==== wrapper stdout RESUME ====
[2024-07-03 23:28:06] 2024-07-04 03:28:05,849 [wrapper] pilotpid: 67476
[2024-07-03 23:28:06] 2024-07-04 03:28:05,851 [wrapper] Pilot exit status: 0
[2024-07-03 23:28:06] 2024-07-04 03:28:05,918 [wrapper] pandaids: 6252932712
[2024-07-03 23:28:06] 2024-07-04 03:28:05,955 [wrapper] cleanup supervisor_pilot 17363 67479
[2024-07-03 23:28:06] 2024-07-04 03:28:05,958 [wrapper] Test setup, not cleaning
[2024-07-03 23:28:06] 2024-07-04 03:28:05,960 [wrapper] ==== wrapper stdout END ====
[2024-07-03 23:28:06] 2024-07-04 03:28:05,962 [wrapper] ==== wrapper stderr END ====
[2024-07-03 23:28:06] 2024-07-04 03:28:05,966 [wrapper] apfmon messages muted
[2024-07-03 23:28:06]  *** Error codes and diagnostics ***
[2024-07-03 23:28:06]     "exeErrorCode": 0,
[2024-07-03 23:28:06]     "exeErrorDiag": "",
[2024-07-03 23:28:06]     "pilotErrorCode": 0,
[2024-07-03 23:28:06]     "pilotErrorDiag": "",
[2024-07-03 23:28:06]  *** Listing of results directory ***
[2024-07-03 23:28:06] total 482672
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas    469766 Jul  3 19:44 pilot3.tar.gz
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas      5654 Jul  3 20:04 queuedata.json
[2024-07-03 23:28:06] -rwx------ 1 boincer umatlas     32220 Jul  3 20:04 runpilot2-wrapper.sh
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas       100 Jul  3 20:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-07-03 23:28:06] -rwxr-xr-x 1 boincer umatlas      7986 Jul  3 20:07 run_atlas
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas       105 Jul  3 20:07 job.xml
[2024-07-03 23:28:06] -rw-r--r-- 2 boincer umatlas 307040574 Jul  3 20:07 EVNT.40175607._000004.pool.root.1
[2024-07-03 23:28:06] -rw-r--r-- 2 boincer umatlas     17537 Jul  3 20:07 start_atlas.sh
[2024-07-03 23:28:06] drwxrwx--x 2 boincer umatlas      4096 Jul  3 20:07 shared
[2024-07-03 23:28:06] -rw-r--r-- 2 boincer umatlas    482463 Jul  3 20:07 input.tar.gz
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas         0 Jul  3 20:07 boinc_lockfile
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas      2522 Jul  3 20:08 pandaJob.out
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas       467 Jul  3 20:08 setup.sh.local
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas   1033408 Jul  3 20:08 agis_schedconf.cvmfs.json
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas   1328502 Jul  3 20:08 cric_ddmendpoints.json
[2024-07-03 23:28:06] drwx------ 4 boincer umatlas      4096 Jul  3 20:08 pilot3
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas       530 Jul  3 23:27 boinc_task_state.xml
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas 180766567 Jul  3 23:27 HITS.40175609._000078.pool.root.1
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas      6388 Jul  3 23:27 init_data.xml
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas      1074 Jul  3 23:27 memory_monitor_summary.json
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas         0 Jul  3 23:27 agis_ddmendpoints.agis.ALL.json
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas    362857 Jul  3 23:27 log.40175609._000078.job.log.tgz.1
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas      7731 Jul  3 23:27 heartbeat.json
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas        95 Jul  3 23:27 pilot_heartbeat.json
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas      8192 Jul  3 23:28 boinc_mmap_file
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas        28 Jul  3 23:28 wrapper_checkpoint.txt
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas      4335 Jul  3 23:28 pilotlog.txt
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas   1085212 Jul  3 23:28 log.40175609._000078.job.log.1
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas       357 Jul  3 23:28 output.list
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas       620 Jul  3 23:28 runtime_log
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas   1464320 Jul  3 23:28 result.tar.gz
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas       650 Jul  3 23:28 ZSINDml8Oj5n7Olcko1bjSoqABFKDmABFKDmOtvXDmlJsKDmJ8E4Un.diag
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas     11405 Jul  3 23:28 runtime_log.err
[2024-07-03 23:28:06] -rw-r--r-- 1 boincer umatlas     21860 Jul  3 23:28 stderr.txt
[2024-07-03 23:28:06] HITS file was successfully produced:
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas 180766567 Jul  3 23:27 shared/HITS.pool.root.1
[2024-07-03 23:28:06]  *** Contents of shared directory: ***
[2024-07-03 23:28:06] total 478312
[2024-07-03 23:28:06] -rw-r--r-- 2 boincer umatlas 307040574 Jul  3 20:07 ATLAS.root_0
[2024-07-03 23:28:06] -rw-r--r-- 2 boincer umatlas     17537 Jul  3 20:07 start_atlas.sh
[2024-07-03 23:28:06] -rw-r--r-- 2 boincer umatlas    482463 Jul  3 20:07 input.tar.gz
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas 180766567 Jul  3 23:27 HITS.pool.root.1
[2024-07-03 23:28:06] -rw------- 1 boincer umatlas   1464320 Jul  3 23:28 result.tar.gz
23:28:07 (63282): run_atlas exited; CPU time 45425.264120
23:28:07 (63282): called boinc_finish(0)

</stderr_txt>
]]>

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